FvH4_1g06990
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
3689923 .. 3693530
3608 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g06990.t2

Sequence Viewer

Length: 1143 bp
ATGGGTCGCCGAAAGAACCAAAGCAGCAGCAGCACTTCGGACTCGGCGGCGACCCGGTTCGAAGACGCCGACCACGACGAGTCCATGTGCGACCACCCGGATCTCGACAAAGCCGTCCTCGACGTCTCCATGGCCGACGACGAGCCTGCGGAGGTCTCCAATGATAAGACCAGCGCCGACTATTACTTCGACTCCTATTCTCACTTCGGTATTCATGAAGAGATGTTAAAGGATCTAGTGAGAACCAAGACATATCAAAATGTTATTTATCAGAATAAGTTTCTATTCAAGGACAAAATTGTTCTTGATGTCGGAGCTGGGACTGGAATTTTGTCCCTATTCTGTGCAAAAGCTGGCGCCAAGCATGTTTATGCAGTTGAATGCTCAGATATGGCTGAGAGGGCAAAAGAGATTGTTGAAACTAATGGGTTTTCTAATGTTGTGACCGTTTTGAAAGGAAAGATTGAAGAACTGGAGCTTCCAGTTGCTAAAGTGGATATAATTATTTCTGAGTGGATGGGATACTTTTTGTTGTTTGAGAACATGTTGAATACAGTCCTCTATGCTCGTGATAAATGGCTGGTAGATGATGGAATTTTGCTACCGGACAAATGTTCTCTCTTTCTGACAGCTATTGAGGATGCAGAGTACAAAGAAGACAAGATAGAATTTTGGAATAACGTATATGGCTTTGACATGAGCTGCATCAAGAAGCAAGCCATGATGGAGCCTCTTGTGGACACAGTTGACCAAAACCAAATTGTTACAAATAGCCAGCTACTCAAGACAATGGATATATCTAAGATGACTCCTGGAGATGCTTCCTTCACAGCTCCTTTTAAGCTTATTGCTGAACGTGATGATTTCATTCACGCTCTCGTAGCGTACTTTGATGTGTCATTTACAAAATGTCATAAATTAATGGGCTTCTCCACAGGGCCAAGATCACGATCTACACATTGGAAGCAAACAGTCCTGTACTTGGAAGATGTTCTGACAGTATGTCATGGAGAGTCGATTGTTGGGACCATGACTGTAGCGCAAAACAAAAAGAATCCCCGTGATATTGATATAATGCTCAAGTATTCATTGAATGGCCAGCGGTGCACAGTCTCTAGGGTTCAATGTTACAAAATGCGTTAA

Protein Analysis

381

Amino Acids

43.08

Weight (kDa)

5.1

Isoelectric Point (pI)

32.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PrmA PF06325 51 - 126 2e-09 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_31 PF13847 52 - 127 4e-08 Methyltransferase domain
Methyltransf_25 PF13649 56 - 129 6.2e-10 Methyltransferase domain
Methyltransf_11 PF08241 57 - 141 3.1e-08 Methyltransferase domain
PRMT_C PF22528 158 - 322 7.5e-59 Arginine methyltransferase oligomerization subdomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 113
AatII GACGTC 1 cut(s) 126
AccB1I GGYRCC 1 cut(s) 356
AciI CCGC 3 cut(s) 47, 149, 1102
AclWI GGATC 2 cut(s) 108, 240
AcoI YGGCCR 2 cut(s) 132, 1096
AcsI RAATTY 3 cut(s) 327, 594, 668
AcyI GRCGYC 3 cut(s) 66, 123, 357
AfaI GTAC 3 cut(s) 650, 887, 980
AfiI CCNNNNNNNGG 1 cut(s) 982
AflIII ACRYGT 1 cut(s) 543
AgsI TTSAA 8 cut(s) 289, 380, 419, 454, 467, 550, 1093, 1124
AhdI GACNNNNNGTC 1 cut(s) 1002
AjnI CCWGG 1 cut(s) 811
AluBI AGCT 8 cut(s) 317, 353, 478, 632, 702, 778, 833, 844
AluI AGCT 8 cut(s) 317, 353, 478, 632, 702, 778, 833, 844
Alw21I GWGCWC 1 cut(s) 1109
Alw26I GTCTC 3 cut(s) 130, 160, 1117
Alw44I GTGCAC 1 cut(s) 1105
AlwI GGATC 2 cut(s) 108, 240
AoxI GGCC 3 cut(s) 132, 938, 1096
ApaLI GTGCAC 1 cut(s) 1105
ApeKI GCWGC 4 cut(s) 24, 27, 30, 702
ApoI RAATTY 3 cut(s) 327, 594, 668
ArsI GACNNNNNNTTYG 4 cut(s) 170, 202, 313, 345
AseI ATTAAT 1 cut(s) 920
Asp700I GAANNNNTTC 1 cut(s) 990
AspLEI GCGC 3 cut(s) 176, 359, 1042
AspS9I GGNCC 2 cut(s) 938, 1026
AsuC2I CCSGG 2 cut(s) 55, 98
AsuII TTCGAA 1 cut(s) 60
AvaII GGWCC 1 cut(s) 1026
BaeGI GKGCMC 1 cut(s) 1109
BalI TGGCCA 1 cut(s) 1098
BanI GGYRCC 1 cut(s) 356
BauI CACGAG 1 cut(s) 567
BbsI GAAGAC 2 cut(s) 69, 663
Bbv12I GWGCWC 1 cut(s) 1109
BbvI GCAGC 4 cut(s) 36, 39, 42, 689
BccI CCATC 3 cut(s) 511, 584, 718
BceAI ACGGC 1 cut(s) 98
BcgI CGANNNNNNTGC 2 cut(s) 128, 162
BciT130I CCWGG 1 cut(s) 813
BciVI GTATCC 1 cut(s) 515
BcnI CCSGG 2 cut(s) 55, 98
BcoDI GTCTC 3 cut(s) 130, 160, 1117
BfaI CTAG 2 cut(s) 236, 1116
BfmI CTRYAG 1 cut(s) 1035
BfoI RGCGCY 2 cut(s) 177, 360
BfuI GTATCC 1 cut(s) 515
BisI GCNGC 5 cut(s) 25, 28, 31, 48, 703
BlsI GCNGC 5 cut(s) 26, 29, 32, 49, 704
Bme1390I CCNGG 3 cut(s) 55, 98, 813
Bme18I GGWCC 1 cut(s) 1026
BmeRI GACNNNNNGTC 1 cut(s) 1002
BmgT120I GGNCC 2 cut(s) 938, 1026
BmiI GGNNCC 3 cut(s) 358, 729, 1027
BmrFI CCNGG 3 cut(s) 55, 98, 813
BmsI GCATC 3 cut(s) 631, 714, 808
BpiI GAAGAC 2 cut(s) 69, 663
BpmI CTGGAG 2 cut(s) 494, 834
Bpu14I TTCGAA 1 cut(s) 60
BpuEI CTTGAG 2 cut(s) 767, 1064
BpuMI CCSGG 2 cut(s) 55, 98
BsaBI GATNNNNATC 1 cut(s) 949
BsaHI GRCGYC 3 cut(s) 66, 123, 357
BsaI GGTCTC 1 cut(s) 160
BsaJI CCNNGG 1 cut(s) 129
BsaWI WCCGGW 1 cut(s) 604
BsaXI ACNNNNNCTCC 2 cut(s) 176, 206
Bsc4I CCNNNNNNNGG 1 cut(s) 982
Bse1I ACTGG 3 cut(s) 328, 477, 482
Bse8I GATNNNNATC 1 cut(s) 949
BseBI CCWGG 1 cut(s) 813
BseDI CCNNGG 1 cut(s) 129
BseGI GGATG 2 cut(s) 522, 646
BseJI GATNNNNATC 1 cut(s) 949
BseLI CCNNNNNNNGG 1 cut(s) 982
BseMII CTCAG 3 cut(s) 387, 399, 501
BseNI ACTGG 3 cut(s) 328, 477, 482
BseSI GKGCMC 1 cut(s) 1109
BseXI GCAGC 4 cut(s) 36, 39, 42, 689
BseYI CCCAGC 1 cut(s) 317
BshFI GGCC 3 cut(s) 134, 940, 1098
BshNI GGYRCC 1 cut(s) 356
BsiHKAI GWGCWC 1 cut(s) 1109
BsiSI CCGG 3 cut(s) 55, 98, 605
BslFI GGGAC 3 cut(s) 319, 334, 1039
BslI CCNNNNNNNGG 1 cut(s) 982
BsmAI GTCTC 3 cut(s) 130, 160, 1117
BsmBI CGTCTC 1 cut(s) 130
BsmFI GGGAC 3 cut(s) 319, 334, 1039
BsmI GAATGC 1 cut(s) 386
BsnI GGCC 3 cut(s) 134, 940, 1098
Bso31I GGTCTC 1 cut(s) 160
Bsp119I TTCGAA 1 cut(s) 60
Bsp1286I GDGCHC 1 cut(s) 1109
Bsp143I GATC 4 cut(s) 100, 232, 944, 950
Bsp19I CCATGG 1 cut(s) 129
BspACI CCGC 3 cut(s) 47, 149, 1102
BspANI GGCC 3 cut(s) 134, 940, 1098
BspCNI CTCAG 3 cut(s) 388, 398, 502
BspHI TCATGA 1 cut(s) 214
BspLI GGNNCC 3 cut(s) 358, 729, 1027
BspPI GGATC 2 cut(s) 108, 240
BspT104I TTCGAA 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 356
BspTNI GGTCTC 1 cut(s) 160
BsrI ACTGG 3 cut(s) 328, 477, 482
BssECI CCNNGG 1 cut(s) 129
BssMI GATC 4 cut(s) 100, 232, 944, 950
BssNI GRCGYC 3 cut(s) 66, 123, 357
BssSI CACGAG 1 cut(s) 567
BssT1I CCWWGG 1 cut(s) 129
Bst2BI CACGAG 1 cut(s) 567
Bst2UI CCWGG 1 cut(s) 813
Bst4CI ACNGT 7 cut(s) 448, 556, 745, 973, 1000, 1036, 1111
Bst6I CTCTTC 1 cut(s) 213
BstACI GRCGYC 3 cut(s) 66, 123, 357
BstBI TTCGAA 1 cut(s) 60
BstC8I GCNNGC 5 cut(s) 147, 355, 717, 776, 1100
BstDEI CTNAG 4 cut(s) 385, 396, 510, 801
BstDSI CCRYGG 1 cut(s) 129
BstF5I GGATG 2 cut(s) 522, 646
BstH2I RGCGCY 2 cut(s) 177, 360
BstHHI GCGC 3 cut(s) 176, 359, 1042
BstKTI GATC 4 cut(s) 103, 235, 947, 953
BstMAI GTCTC 3 cut(s) 130, 160, 1117
BstMBI GATC 4 cut(s) 100, 232, 944, 950
BstMWI GCNNNNNNNGC 4 cut(s) 30, 401, 881, 1104
BstNI CCWGG 1 cut(s) 813
BstNSI RCATGY 2 cut(s) 368, 547
BstSCI CCNGG 3 cut(s) 53, 96, 811
BstSFI CTRYAG 1 cut(s) 1035
BstSLI GKGCMC 1 cut(s) 1109
BstV1I GCAGC 4 cut(s) 36, 39, 42, 689
BstV2I GAAGAC 2 cut(s) 69, 663
BstX2I RGATCY 2 cut(s) 100, 232
BstYI RGATCY 2 cut(s) 100, 232
BsuI GTATCC 1 cut(s) 515
BsuRI GGCC 3 cut(s) 134, 940, 1098
BtgI CCRYGG 1 cut(s) 129
BtsCI GGATG 2 cut(s) 522, 646
Cac8I GCNNGC 5 cut(s) 147, 355, 717, 776, 1100
CciI TCATGA 1 cut(s) 214
CfoI GCGC 3 cut(s) 176, 359, 1042
Cfr13I GGNCC 2 cut(s) 938, 1026
CseI GACGC 1 cut(s) 74
Csp6I GTAC 3 cut(s) 649, 886, 979
CviAII CATG 9 cut(s) 85, 130, 215, 365, 544, 697, 721, 1007, 1030
CviQI GTAC 3 cut(s) 649, 886, 979
DdeI CTNAG 4 cut(s) 385, 396, 510, 801
DinI GGCGCC 1 cut(s) 358
DpnI GATC 4 cut(s) 102, 234, 946, 952
DpnII GATC 4 cut(s) 100, 232, 944, 950
DrdI GACNNNNNNGTC 1 cut(s) 113
DriI GACNNNNNGTC 1 cut(s) 1002
DseDI GACNNNNNNGTC 1 cut(s) 113
EaeI YGGCCR 2 cut(s) 132, 1096
Eam1104I CTCTTC 1 cut(s) 213
Eam1105I GACNNNNNGTC 1 cut(s) 1002
EarI CTCTTC 1 cut(s) 213
Eco130I CCWWGG 1 cut(s) 129
Eco31I GGTCTC 1 cut(s) 160
Eco47I GGWCC 1 cut(s) 1026
EcoRII CCWGG 1 cut(s) 811
EcoT14I CCWWGG 1 cut(s) 129
EgeI GGCGCC 1 cut(s) 358
EheI GGCGCC 1 cut(s) 358
ErhI CCWWGG 1 cut(s) 129
Esp3I CGTCTC 1 cut(s) 130
FaeI CATG 9 cut(s) 88, 133, 218, 368, 547, 700, 724, 1010, 1033
FaqI GGGAC 3 cut(s) 319, 334, 1039
FatI CATG 9 cut(s) 84, 129, 214, 364, 543, 696, 720, 1006, 1029
Fnu4HI GCNGC 5 cut(s) 25, 28, 31, 48, 703
FokI GGATG 2 cut(s) 529, 653
Fsp4HI GCNGC 5 cut(s) 25, 28, 31, 48, 703
FspBI CTAG 2 cut(s) 236, 1116
GlaI GCGC 3 cut(s) 175, 358, 1041
GluI GCNGC 5 cut(s) 25, 28, 31, 48, 703
GsaI CCCAGC 1 cut(s) 321
GsuI CTGGAG 2 cut(s) 494, 834
HaeII RGCGCY 2 cut(s) 177, 360
HaeIII GGCC 3 cut(s) 134, 940, 1098
HapII CCGG 3 cut(s) 55, 98, 605
HgaI GACGC 1 cut(s) 74
HhaI GCGC 3 cut(s) 176, 359, 1042
Hin1I GRCGYC 3 cut(s) 66, 123, 357
Hin1II CATG 9 cut(s) 88, 133, 218, 368, 547, 700, 724, 1010, 1033
Hin6I GCGC 3 cut(s) 174, 357, 1040
HinP1I GCGC 3 cut(s) 174, 357, 1040
HincII GTYRAC 1 cut(s) 748
HindII GTYRAC 1 cut(s) 748
HindIII AAGCTT 1 cut(s) 842
HinfI GANTC 6 cut(s) 41, 80, 191, 808, 1013, 1054
HpaII CCGG 3 cut(s) 55, 98, 605
Hpy166II GTNNAC 3 cut(s) 739, 748, 1107
Hpy188I TCNGA 7 cut(s) 40, 273, 314, 388, 511, 627, 996
Hpy188III TCNNGA 7 cut(s) 104, 215, 305, 569, 709, 784, 948
Hpy8I GTNNAC 3 cut(s) 739, 748, 1107
Hpy99I CGWCG 4 cut(s) 80, 125, 140, 143
HpyAV CCTTC 1 cut(s) 835
HpyCH4III ACNGT 7 cut(s) 448, 556, 745, 973, 1000, 1036, 1111
HpyCH4IV ACGT 3 cut(s) 123, 681, 856
HpyCH4V TGCA 5 cut(s) 347, 374, 644, 705, 1107
HpyF10VI GCNNNNNNNGC 4 cut(s) 30, 401, 881, 1104
HpyF3I CTNAG 4 cut(s) 385, 396, 510, 801
HpySE526I ACGT 3 cut(s) 123, 681, 856
Hsp92I GRCGYC 3 cut(s) 66, 123, 357
Hsp92II CATG 9 cut(s) 88, 133, 218, 368, 547, 700, 724, 1010, 1033
HspAI GCGC 3 cut(s) 174, 357, 1040
KasI GGCGCC 1 cut(s) 356
Kzo9I GATC 4 cut(s) 100, 232, 944, 950
LmnI GCTCC 4 cut(s) 314, 475, 727, 838
Lsp1109I GCAGC 4 cut(s) 36, 39, 42, 689
LweI GCATC 3 cut(s) 631, 714, 808
MaeI CTAG 2 cut(s) 236, 1116
MaeII ACGT 3 cut(s) 123, 681, 856
MaeIII GTNAC 3 cut(s) 442, 763, 1127
MalI GATC 4 cut(s) 102, 234, 946, 952
MboI GATC 4 cut(s) 100, 232, 944, 950
MboII GAAGA 5 cut(s) 74, 230, 479, 668, 998
MflI RGATCY 2 cut(s) 100, 232
MhlI GDGCHC 1 cut(s) 1109
MlsI TGGCCA 1 cut(s) 1098
MluCI AATT 7 cut(s) 297, 327, 501, 594, 668, 759, 917
MluNI TGGCCA 1 cut(s) 1098
Mly113I GGCGCC 1 cut(s) 357
MlyI GAGTC 5 cut(s) 35, 89, 185, 802, 1022
MmeI TCCRAC 1 cut(s) 292
MnlI CCTC 6 cut(s) 128, 145, 393, 569, 631, 741
Mox20I TGGCCA 1 cut(s) 1098
MroXI GAANNNNTTC 1 cut(s) 990
MscI TGGCCA 1 cut(s) 1098
MseI TTAA 4 cut(s) 227, 840, 920, 1141
MslI CAYNNNNRTG 1 cut(s) 369
Msp20I TGGCCA 1 cut(s) 1098
MspA1I CMGCKG 1 cut(s) 1102
MspI CCGG 3 cut(s) 55, 98, 605
MspR9I CCNGG 3 cut(s) 55, 98, 813
Mva1269I GAATGC 1 cut(s) 386
MvaI CCWGG 1 cut(s) 813
MwoI GCNNNNNNNGC 4 cut(s) 30, 401, 881, 1104
NarI GGCGCC 1 cut(s) 357
NciI CCSGG 2 cut(s) 55, 98
NcoI CCATGG 1 cut(s) 129
NdeII GATC 4 cut(s) 100, 232, 944, 950
NlaIII CATG 9 cut(s) 88, 133, 218, 368, 547, 700, 724, 1010, 1033
NlaIV GGNNCC 3 cut(s) 358, 729, 1027
NmeAIII GCCGAG 1 cut(s) 23
NmuCI GTSAC 1 cut(s) 442
NspI RCATGY 2 cut(s) 368, 547
NspV TTCGAA 1 cut(s) 60
PagI TCATGA 1 cut(s) 214
PciI ACATGT 1 cut(s) 543
PcsI WCGNNNNNNNCGW 3 cut(s) 66, 72, 111
PctI GAATGC 1 cut(s) 386
PdmI GAANNNNTTC 1 cut(s) 990
PfeI GAWTC 1 cut(s) 1054
PfoI TCCNGGA 1 cut(s) 811
PkrI GCNGC 5 cut(s) 26, 29, 32, 49, 704
PleI GAGTC 5 cut(s) 35, 88, 185, 802, 1021
PluTI GGCGCC 1 cut(s) 360
PpsI GAGTC 5 cut(s) 35, 88, 185, 802, 1021
PscI ACATGT 1 cut(s) 543
PshBI ATTAAT 1 cut(s) 920
Psp6I CCWGG 1 cut(s) 811
PspFI CCCAGC 1 cut(s) 317
PspGI CCWGG 1 cut(s) 811
PspN4I GGNNCC 3 cut(s) 358, 729, 1027
PspPI GGNCC 2 cut(s) 938, 1026
PsuI RGATCY 2 cut(s) 100, 232
RsaI GTAC 3 cut(s) 650, 887, 980
RsaNI GTAC 3 cut(s) 649, 886, 979
RseI CAYNNNNRTG 1 cut(s) 369
SaqAI TTAA 4 cut(s) 227, 840, 920, 1141
SatI GCNGC 5 cut(s) 25, 28, 31, 48, 703
Sau3AI GATC 4 cut(s) 100, 232, 944, 950
Sau96I GGNCC 2 cut(s) 938, 1026
SchI GAGTC 5 cut(s) 35, 89, 185, 802, 1022
ScrFI CCNGG 3 cut(s) 55, 98, 813
SduI GDGCHC 1 cut(s) 1109
SfaNI GCATC 3 cut(s) 631, 714, 808
SfcI CTRYAG 1 cut(s) 1035
SfoI GGCGCC 1 cut(s) 358
SfuI TTCGAA 1 cut(s) 60
SinI GGWCC 1 cut(s) 1026
SmiMI CAYNNNNRTG 1 cut(s) 369
SmlI CTYRAG 2 cut(s) 782, 1079
SmoI CTYRAG 2 cut(s) 782, 1079
Sse9I AATT 7 cut(s) 297, 327, 501, 594, 668, 759, 917
SsiI CCGC 3 cut(s) 47, 149, 1102
SspDI GGCGCC 1 cut(s) 356
SspMI CTAG 2 cut(s) 236, 1116
StyD4I CCNGG 3 cut(s) 53, 96, 811
StyI CCWWGG 1 cut(s) 129
TaaI ACNGT 7 cut(s) 448, 556, 745, 973, 1000, 1036, 1111
TaiI ACGT 3 cut(s) 126, 684, 859
TaqI TCGA 5 cut(s) 60, 105, 120, 189, 1016
TasI AATT 7 cut(s) 297, 327, 501, 594, 668, 759, 917
TatI WGTACW 2 cut(s) 648, 978
TauI GCSGC 1 cut(s) 50
TfiI GAWTC 1 cut(s) 1054
Tru1I TTAA 4 cut(s) 227, 840, 920, 1141
Tru9I TTAA 4 cut(s) 227, 840, 920, 1141
TseFI GTSAC 1 cut(s) 442
TseI GCWGC 4 cut(s) 24, 27, 30, 702
Tsp45I GTSAC 1 cut(s) 442
TspDTI ATGAA 4 cut(s) 203, 231, 856, 1077
VneI GTGCAC 1 cut(s) 1105
VpaK11BI GGWCC 1 cut(s) 1026
VspI ATTAAT 1 cut(s) 920
XapI RAATTY 3 cut(s) 327, 594, 668
XceI RCATGY 2 cut(s) 368, 547
XmnI GAANNNNTTC 1 cut(s) 990
XspI CTAG 2 cut(s) 236, 1116
ZraI GACGTC 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.