FvH4_1g07071

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0012559
Physical Location & Seq
Reverse (-)
3741836 .. 3744790
2955 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g07071.t1

Sequence Viewer

Length: 2955 bp
ATGGAATGTGACCTAATTGTTCTGGGAGTGTCACCGGGTTTTGGAGCCCGGTTATTGCCAATTTGCCAGAGACCCACTACTTATTCAGTTGGATTGCATAGCAAGATTAGTCCCAGTGTCAGGTCATTGTTGCTGTCTAGATTAAAGTCATGTTCTTGTGCTGTGGTGAATGTTGTCGAGTCGAATCCAATCAGTGATGTGACTCAAAAGCATGCCCGAAACTCGGAGGAAAGGGTTCATCAGGTAGGATTAGATAATAGGAATGTGGGTGATCAGGGAATAGTTGGAGGCAATGTGAAAGCCAGGTCTTTAGTTTGGGATGGGAAGAAGAGGCTTATACAGTATTCTGGGATGCTTAGAACATGTGCTTCACAAGGGGCTTTGAATGAGGGGAAGGCTATTCACGGGCAGGTGATAAAGAATGGGATACACCCGGATATGCATTTGTGGGTTTCGTTGGTTAATGTTTACTCGAAATGTGGGGATTCTCTGTATGCCCGCAAAGTGCTTGGTGAGATGCCTGATCGAGATGTTGTGTCGTGGACTACTTTGATTCATGGGTTTGTGGTCAAAGGTTTGGGTGTCGATGCTGTTAATTTGTTCTGTGAGATGAAGAAAGATGATACAAGAGCAAATGACTTTTCCTTGGCTACTGGTTTGAAAGCGTGTTCTTTGTGCTTAGATTTAGGCTTTGGAAAACAGTTGCATGCAGAAGCAGTGAAAGCGGGGTTCTTCTCGGATGATTTTGTTGGGTCTGCTCTCGTTGATCTTTATGCAAAATGTGGTCAGCTGGAACTTGCCAATAAAGTGTTATTTTGTATGCCTGAGCAGAATGTTGTATCATGGAATGCCTTGCTAAATGGGTATGCTCAGGAAGGTAATGGAAACCAAGTTCTGAAATTGTTCTGCAAAATGACGGAATTAGATATGAGGTTAAATAAGTTCACCTTGTCTACTGTCCTCAAAGGTTGTGCAAATGTAGAAAATTTGAGAGCAGGTCGGGTTGTGCATTCTTTGGTTGTCAAGGTTGGGTTTGAGGTTGATGAATTTCTGGGTTGCAGTCTTGTCGATATGTATTCCAAGTGTCGAATGGCAATTGATGCGGTAAAAGTATTCAGGACAATTAAAGATCCTGATGTAGTGGCCTGGAGCGCAATTATCACTTGCCTTGATCAACAAGGGCAATACCAGGAAATGGCTCGACTATTTCATTCAATGATAAGCACAGGCATCTCACCGAACCAATTTACCCTTTCTAGTATCATTAGTGCTGCCACTGATCTTGGTGACCTCCGCTTTGGTGAGAGCATCCATACTCTTATATGGAAATATGGCTATGAATCTGATCTTCCAGTCAGCAATGCTCTAATCACAATGTATATGAAAATTGGATGTGTGAAAAATGGTGCTCAGGTTTTTGAGGCAATGACAGAACATGATCTGATTTCATGGAATGCCCTTCTATCAGGAGCACACGACCTAGGTCCAAGAGTGTTCCACCAAATGCTCGCTGAAGGTCGCAAGCCCAACATGTACTCCTTCATCAGTATTTTAAGATCCTGTTCTAGCCTCTTGGATGCAGACCTCGGGAAACAAGTGCATTCCCATATTATCAAAACAAGCCTCCATGATAATGACTTTGTTGGGACGGCTCTCATTGACATGTATGCCAAAAGCAGGTTACTAGATGATGCTGTTATAGCTTTCAGTAGATTGAGTAATCGAGATCTCTTCTCTTGGACAGTCATCATTACTGGTTATGTACAGAGTGATCAAGCAGAGAAAGCTGTTGCTTCTTTCAGTCAGATGCAACAAGAAGGAGTGAAGCCAAATGAGTTTACTCTTGCGGGCTGTTTGAGTGCTTGCTCCCGTATAGCTATGCTGGAAAATGGGCGGCAGCTCCATTCGATGGCAATTAAGTCAGGGCATTTAGAAGATTTGTTTGTTGGGAGTGCACTAGTTGATATGTATGCAAAGTGTGGATGCATAGCTGATGCTGAGGGTACATTTGAGGCTTTGGCTTCTAGGGATACAGTCTCATGGAACATCATGATTTGTGGATACTCTCAATATGGCCAAGGCGAGAAGGCTCTGGAAGCTTTTTCGATAATGTTAGACGAAGGCGCCGTGCCAGATGAGATCACTTTCATCGGTGTTCTTTCAGCTTGTAGTCACCTGGGTTTGGTCGAAGAAGGGAAAAAGCACTTTGACTCACTTAGCAAAGTTTTCCAGATCATTCCTACCATTGAGCATTATGCTTGTATGGTTGATATTCTTGGTAGTGCTGGGAAATTTGATGAGGTTGAAAGCTTCATTGAGACAATGAAACTGACACCATATGCCATTATTTGGGAGACTGTTCTTGGAGCTTGTAAGAAGTATGGAAATGTGGATTTTGGTGAAACAGCTGCAGGAAAGCTTTTTGAGCTTGAACCTGAGATGGGTTCGACTTATATATTGCTGTCAAATATCTATGCAAATAAAGGTAGGTGGGACGATGTTAGAAAAGTCAGGACATTAATGTCCAGCCAGGGTATTAAAAAGGAGCCTGGTTGTAGCTGGGTTGAAGTTGATGGAAAAGTTCACACTTTTGTCTCTCATGATGGTTCGCATCCAAAAATCAAGGAAATCCATCTGAAATTGGAGGAACTAGGTGAAAAGCTGACTTCAGTTGGTTATGTACCAGACACAGAGAACGTTCTCCACGATATCACCGAGCGAGAAAAAAAGGAACATCTCCAATATCACAGTGAAAGGTTGGCTCTTGCGTATGCCCTCCTAAGCACCGATCCTGTAAAAACTATTCATATTTTCAAAAATCTACGCATATGTGGGGACTGCCATGATGTTATGAAGCTCATCTCAGACATCACAAATAGGGAGATAATTGTTCGTGACATCAAGCGGTTTCATGATTTTAAGAATGGCACTTGCTCCTGTCAAGACTCCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 map00190 map01100 map04714
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

985

Amino Acids

108.74

Weight (kDa)

6.07

Isoelectric Point (pI)

31.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 176 - 223 1.4e-07 PPR repeat family
PPR PF01535 179 - 207 9.7e-06 PPR repeat
PPR_2 PF13041 278 - 326 1.1e-11 PPR repeat family
PPR PF01535 280 - 308 6.6e-06 PPR repeat
PPR_2 PF13041 378 - 424 6.2e-09 PPR repeat family
PPR_2 PF13041 576 - 623 3.4e-09 PPR repeat family
PPR_2 PF13041 676 - 724 1.9e-10 PPR repeat family
PPR PF01535 679 - 708 6.3e-06 PPR repeat
E_motif PF20431 794 - 856 2.7e-24 E motif
Eplus_motif PF20430 861 - 884 7.1e-06 E+ motif
DYW_deaminase PF14432 892 - 984 2.7e-38 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 400
AasI GACNNNNNNGTC 1 cut(s) 2521
Acc36I ACCTGC 3 cut(s) 400, 986, 1668
AccB1I GGYRCC 1 cut(s) 2123
AccB7I CCANNNNNTGG 3 cut(s) 1195, 1909, 2349
AccI GTMKAC 1 cut(s) 953
AciI CCGC 7 cut(s) 499, 725, 1103, 1294, 1847, 1894, 2905
AclI AACGTT 1 cut(s) 2697
AclWI GGATC 3 cut(s) 1124, 1551, 2783
AcoI YGGCCR 1 cut(s) 2074
AcsI RAATTY 3 cut(s) 985, 1046, 2291
AcuI CTGAAG 2 cut(s) 1533, 2652
AcyI GRCGYC 1 cut(s) 2124
AfaI GTAC 4 cut(s) 1535, 1764, 2005, 2682
AfiI CCNNNNNNNGG 9 cut(s) 41, 120, 223, 1195, 1677, 1909, 2182, 2349, 2441
AflIII ACRYGT 3 cut(s) 362, 1530, 1662
AgsI TTSAA 7 cut(s) 385, 661, 1215, 2306, 2432, 2567, 2815
AhlI ACTAGT 1 cut(s) 1957
AjnI CCWGG 7 cut(s) 302, 1145, 1188, 2175, 2529, 2548, 2948
AloI GAACNNNNNNTCC 2 cut(s) 876, 908
Alw21I GWGCWC 3 cut(s) 1411, 1474, 1957
Alw26I GTCTC 5 cut(s) 64, 2041, 2312, 2348, 2599
Alw44I GTGCAC 1 cut(s) 1953
AlwI GGATC 3 cut(s) 1124, 1551, 2783
Ama87I CYCGRG 1 cut(s) 1586
AoxI GGCC 2 cut(s) 1143, 2074
ApaLI GTGCAC 1 cut(s) 1953
ApeKI GCWGC 3 cut(s) 1271, 1897, 2408
ApoI RAATTY 3 cut(s) 985, 1046, 2291
ArsI GACNNNNNNTTYG 2 cut(s) 1280, 1312
AseI ATTAAT 1 cut(s) 2519
Asp700I GAANNNNTTC 2 cut(s) 234, 902
AspA2I CCTAGG 1 cut(s) 1480
AspLEI GCGC 2 cut(s) 1154, 2126
AspS9I GGNCC 1 cut(s) 1484
AsuC2I CCSGG 3 cut(s) 36, 49, 434
AvaI CYCGRG 1 cut(s) 1586
AvaII GGWCC 1 cut(s) 1484
AvrII CCTAGG 1 cut(s) 1480
BaeGI GKGCMC 1 cut(s) 1957
BalI TGGCCA 1 cut(s) 2076
BanI GGYRCC 1 cut(s) 2123
BanII GRGCYC 1 cut(s) 49
Bbv12I GWGCWC 3 cut(s) 1411, 1474, 1957
BbvCI CCTCAGC 1 cut(s) 1998
BbvI GCAGC 3 cut(s) 1258, 1909, 2395
BccI CCATC 6 cut(s) 314, 1903, 2434, 2567, 2597, 2640
BceAI ACGGC 2 cut(s) 1665, 2111
BcgI CGANNNNNNTGC 2 cut(s) 1048, 1082
BciT130I CCWGG 7 cut(s) 304, 1147, 1190, 2177, 2531, 2550, 2950
BciVI GTATCC 3 cut(s) 420, 2023, 2054
BclI TGATCA 3 cut(s) 271, 1171, 1771
BcnI CCSGG 3 cut(s) 36, 49, 434
BcoDI GTCTC 5 cut(s) 64, 2041, 2312, 2348, 2599
BcuI ACTAGT 1 cut(s) 1957
BfaI CTAG 8 cut(s) 138, 1257, 1481, 1566, 1685, 1958, 2025, 2651
BfmI CTRYAG 1 cut(s) 2409
BfoI RGCGCY 1 cut(s) 2127
BfuAI ACCTGC 3 cut(s) 400, 986, 1668
BfuI GTATCC 3 cut(s) 420, 2023, 2054
BglII AGATCT 1 cut(s) 1726
BisI GCNGC 4 cut(s) 1272, 1895, 1898, 2409
BlnI CCTAGG 1 cut(s) 1480
BlsI GCNGC 4 cut(s) 1273, 1896, 1899, 2410
Bme18I GGWCC 1 cut(s) 1484
BmeT110I CYCGRG 1 cut(s) 1586
BmgT120I GGNCC 1 cut(s) 1484
BmiI GGNNCC 3 cut(s) 46, 2125, 2547
BmrI ACTGGG 1 cut(s) 108
BmuI ACTGGG 1 cut(s) 108
BoxI GACNNNNGTC 1 cut(s) 1482
BpmI CTGGAG 1 cut(s) 1168
Bpu10I CCTNAGC 5 cut(s) 825, 870, 1410, 1998, 2780
BpuMI CCSGG 3 cut(s) 36, 49, 434
BsaHI GRCGYC 1 cut(s) 2124
BsaI GGTCTC 1 cut(s) 64
BsaJI CCNNGG 6 cut(s) 645, 1480, 1585, 2077, 2176, 2530
BsaXI ACNNNNNCTCC 4 cut(s) 279, 309, 1520, 1550
Bsc4I CCNNNNNNNGG 9 cut(s) 41, 120, 223, 1195, 1677, 1909, 2182, 2349, 2441
Bse1I ACTGG 4 cut(s) 114, 658, 1352, 1759
Bse3DI GCAATG 3 cut(s) 298, 1366, 1431
BseBI CCWGG 7 cut(s) 304, 1147, 1190, 2177, 2531, 2550, 2950
BseDI CCNNGG 6 cut(s) 645, 1480, 1585, 2077, 2176, 2530
BseGI GGATG 8 cut(s) 325, 357, 745, 1308, 1397, 1582, 1988, 2611
BseLI CCNNNNNNNGG 9 cut(s) 41, 120, 223, 1195, 1677, 1909, 2182, 2349, 2441
BseMI GCAATG 3 cut(s) 298, 1366, 1431
BseMII CTCAG 6 cut(s) 816, 884, 1424, 1989, 2427, 2877
BseNI ACTGG 4 cut(s) 114, 658, 1352, 1759
BseSI GKGCMC 1 cut(s) 1957
BseXI GCAGC 3 cut(s) 1258, 1909, 2395
BseYI CCCAGC 2 cut(s) 2285, 2559
BshFI GGCC 2 cut(s) 1145, 2076
BshNI GGYRCC 1 cut(s) 2123
BsiHKAI GWGCWC 3 cut(s) 1411, 1474, 1957
BsiHKCI CYCGRG 1 cut(s) 1586
BsiSI CCGG 3 cut(s) 35, 49, 434
BslFI GGGAC 4 cut(s) 96, 1660, 2507, 2849
BslI CCNNNNNNNGG 9 cut(s) 41, 120, 223, 1195, 1677, 1909, 2182, 2349, 2441
BsmAI GTCTC 5 cut(s) 64, 2041, 2312, 2348, 2599
BsmFI GGGAC 4 cut(s) 96, 1660, 2507, 2849
BsmI GAATGC 4 cut(s) 853, 1009, 1459, 1600
BsnI GGCC 2 cut(s) 1145, 2076
Bso31I GGTCTC 1 cut(s) 64
BsoBI CYCGRG 1 cut(s) 1586
Bsp1286I GDGCHC 4 cut(s) 49, 1411, 1474, 1957
Bsp1407I TGTACA 1 cut(s) 1762
BspACI CCGC 7 cut(s) 499, 725, 1103, 1294, 1847, 1894, 2905
BspANI GGCC 2 cut(s) 1145, 2076
BspCNI CTCAG 6 cut(s) 817, 883, 1423, 1990, 2428, 2876
BspHI TCATGA 3 cut(s) 2049, 2599, 2911
BspLI GGNNCC 3 cut(s) 46, 2125, 2547
BspMAI CTGCAG 1 cut(s) 2413
BspMI ACCTGC 3 cut(s) 400, 986, 1668
BspPI GGATC 3 cut(s) 1124, 1551, 2783
BspT107I GGYRCC 1 cut(s) 2123
BspTNI GGTCTC 1 cut(s) 64
BsrDI GCAATG 3 cut(s) 298, 1366, 1431
BsrGI TGTACA 1 cut(s) 1762
BsrI ACTGG 4 cut(s) 114, 658, 1352, 1759
BssECI CCNNGG 6 cut(s) 645, 1480, 1585, 2077, 2176, 2530
BssNI GRCGYC 1 cut(s) 2124
BssT1I CCWWGG 3 cut(s) 645, 1480, 2077
Bst2UI CCWGG 7 cut(s) 304, 1147, 1190, 2177, 2531, 2550, 2950
Bst4CI ACNGT 7 cut(s) 342, 702, 958, 1744, 2035, 2359, 2750
Bst6I CTCTTC 2 cut(s) 323, 1736
BstACI GRCGYC 1 cut(s) 2124
BstAPI GCANNNNNTGC 1 cut(s) 1100
BstAUI TGTACA 1 cut(s) 1762
BstC8I GCNNGC 7 cut(s) 213, 499, 708, 1509, 1523, 1849, 1864
BstEII GGTNACC 1 cut(s) 1286
BstF5I GGATG 8 cut(s) 325, 357, 745, 1308, 1397, 1582, 1988, 2611
BstH2I RGCGCY 1 cut(s) 2127
BstHHI GCGC 2 cut(s) 1154, 2126
BstMAI GTCTC 5 cut(s) 64, 2041, 2312, 2348, 2599
BstMWI GCNNNNNNNGC 7 cut(s) 722, 1100, 1151, 1700, 1784, 2096, 2425
BstNI CCWGG 7 cut(s) 304, 1147, 1190, 2177, 2531, 2550, 2950
BstNSI RCATGY 5 cut(s) 215, 366, 710, 1534, 1666
BstPAI GACNNNNGTC 1 cut(s) 1482
BstPI GGTNACC 1 cut(s) 1286
BstSFI CTRYAG 1 cut(s) 2409
BstSLI GKGCMC 1 cut(s) 1957
BstV1I GCAGC 3 cut(s) 1258, 1909, 2395
BstX2I RGATCY 3 cut(s) 1129, 1556, 1726
BstYI RGATCY 3 cut(s) 1129, 1556, 1726
BsuI GTATCC 3 cut(s) 420, 2023, 2054
BsuRI GGCC 2 cut(s) 1145, 2076
BtsCI GGATG 8 cut(s) 325, 357, 745, 1308, 1397, 1582, 1988, 2611
BtsI GCAGTG 1 cut(s) 723
BtsIMutI CAGTG 5 cut(s) 121, 199, 723, 1275, 2755
BveI ACCTGC 3 cut(s) 400, 986, 1668
Cac8I GCNNGC 7 cut(s) 213, 499, 708, 1509, 1523, 1849, 1864
CciI TCATGA 3 cut(s) 2049, 2599, 2911
CfoI GCGC 2 cut(s) 1154, 2126
Cfr13I GGNCC 1 cut(s) 1484
Csp6I GTAC 4 cut(s) 1534, 1763, 2004, 2681
CspCI CAANNNNNGTGG 2 cut(s) 1264, 1299
CviQI GTAC 4 cut(s) 1534, 1763, 2004, 2681
DinI GGCGCC 1 cut(s) 2125
DrdI GACNNNNNNGTC 1 cut(s) 2521
DseDI GACNNNNNNGTC 1 cut(s) 2521
EaeI YGGCCR 1 cut(s) 2074
Eam1104I CTCTTC 2 cut(s) 323, 1736
EarI CTCTTC 2 cut(s) 323, 1736
Eco130I CCWWGG 3 cut(s) 645, 1480, 2077
Eco24I GRGCYC 1 cut(s) 49
Eco31I GGTCTC 1 cut(s) 64
Eco32I GATATC 1 cut(s) 2710
Eco47I GGWCC 1 cut(s) 1484
Eco57I CTGAAG 2 cut(s) 1533, 2652
Eco88I CYCGRG 1 cut(s) 1586
Eco91I GGTNACC 1 cut(s) 1286
EcoO65I GGTNACC 1 cut(s) 1286
EcoRII CCWGG 7 cut(s) 302, 1145, 1188, 2175, 2529, 2548, 2948
EcoRV GATATC 1 cut(s) 2710
EcoT14I CCWWGG 3 cut(s) 645, 1480, 2077
EcoT22I ATGCAT 2 cut(s) 444, 1988
EcoT38I GRGCYC 1 cut(s) 49
EgeI GGCGCC 1 cut(s) 2125
EheI GGCGCC 1 cut(s) 2125
ErhI CCWWGG 3 cut(s) 645, 1480, 2077
FalI AAGNNNNNCTT 2 cut(s) 932, 964
FaqI GGGAC 4 cut(s) 96, 1660, 2507, 2849
FauI CCCGC 3 cut(s) 506, 718, 1840
FauNDI CATATG 2 cut(s) 2338, 2828
FbaI TGATCA 3 cut(s) 271, 1171, 1771
FblI GTMKAC 1 cut(s) 953
Fnu4HI GCNGC 4 cut(s) 1272, 1895, 1898, 2409
FokI GGATG 8 cut(s) 332, 364, 752, 1295, 1404, 1589, 1995, 2598
FriOI GRGCYC 1 cut(s) 49
Fsp4HI GCNGC 4 cut(s) 1272, 1895, 1898, 2409
FspBI CTAG 8 cut(s) 138, 1257, 1481, 1566, 1685, 1958, 2025, 2651
GlaI GCGC 2 cut(s) 1153, 2125
GluI GCNGC 4 cut(s) 1272, 1895, 1898, 2409
GsaI CCCAGC 2 cut(s) 2289, 2563
GsuI CTGGAG 1 cut(s) 1168
HaeII RGCGCY 1 cut(s) 2127
HaeIII GGCC 2 cut(s) 1145, 2076
HapII CCGG 3 cut(s) 35, 49, 434
HhaI GCGC 2 cut(s) 1154, 2126
Hin1I GRCGYC 1 cut(s) 2124
Hin6I GCGC 2 cut(s) 1152, 2124
HinP1I GCGC 2 cut(s) 1152, 2124
HindIII AAGCTT 3 cut(s) 2097, 2308, 2417
HinfI GANTC 8 cut(s) 179, 184, 202, 485, 553, 1340, 2210, 2945
HpaII CCGG 3 cut(s) 35, 49, 434
Hpy166II GTNNAC 7 cut(s) 469, 543, 945, 954, 1839, 1955, 2584
Hpy188I TCNGA 8 cut(s) 226, 739, 897, 1345, 1443, 1806, 2637, 2866
Hpy8I GTNNAC 7 cut(s) 469, 543, 945, 954, 1839, 1955, 2584
HpyAV CCTTC 9 cut(s) 388, 869, 1469, 1508, 1549, 1811, 2080, 2114, 2186
HpyCH4III ACNGT 7 cut(s) 342, 702, 958, 1744, 2035, 2359, 2750
HpyCH4IV ACGT 1 cut(s) 2697
HpyF10VI GCNNNNNNNGC 7 cut(s) 722, 1100, 1151, 1700, 1784, 2096, 2425
HpySE526I ACGT 1 cut(s) 2697
Hsp92I GRCGYC 1 cut(s) 2124
HspAI GCGC 2 cut(s) 1152, 2124
KasI GGCGCC 1 cut(s) 2123
Ksp22I TGATCA 3 cut(s) 271, 1171, 1771
LmnI GCTCC 8 cut(s) 44, 1149, 1469, 1871, 1905, 2366, 2545, 2939
Lsp1109I GCAGC 3 cut(s) 1258, 1909, 2395
MaeI CTAG 8 cut(s) 138, 1257, 1481, 1566, 1685, 1958, 2025, 2651
MaeII ACGT 1 cut(s) 2697
MaeIII GTNAC 7 cut(s) 8, 30, 199, 1286, 1680, 2171, 2894
MboII GAAGA 8 cut(s) 337, 340, 625, 724, 1340, 1723, 1946, 2201
MfeI CAATTG 1 cut(s) 1095
MflI RGATCY 3 cut(s) 1129, 1556, 1726
MhlI GDGCHC 4 cut(s) 49, 1411, 1474, 1957
MlsI TGGCCA 1 cut(s) 2076
MluNI TGGCCA 1 cut(s) 2076
Mly113I GGCGCC 1 cut(s) 2124
MlyI GAGTC 4 cut(s) 188, 196, 2204, 2939
MmeI TCCRAC 2 cut(s) 70, 265
Mox20I TGGCCA 1 cut(s) 2076
Mph1103I ATGCAT 2 cut(s) 444, 1988
MroXI GAANNNNTTC 2 cut(s) 234, 902
MscI TGGCCA 1 cut(s) 2076
MslI CAYNNNNRTG 2 cut(s) 1632, 1661
Msp20I TGGCCA 1 cut(s) 2076
MspA1I CMGCKG 2 cut(s) 790, 2408
MspI CCGG 3 cut(s) 35, 49, 434
MunI CAATTG 1 cut(s) 1095
Mva1269I GAATGC 4 cut(s) 853, 1009, 1459, 1600
MvaI CCWGG 7 cut(s) 304, 1147, 1190, 2177, 2531, 2550, 2950
MwoI GCNNNNNNNGC 7 cut(s) 722, 1100, 1151, 1700, 1784, 2096, 2425
NarI GGCGCC 1 cut(s) 2124
NciI CCSGG 3 cut(s) 36, 49, 434
NdeI CATATG 2 cut(s) 2338, 2828
NlaIV GGNNCC 3 cut(s) 46, 2125, 2547
NmuCI GTSAC 6 cut(s) 8, 30, 199, 1286, 2171, 2894
NsiI ATGCAT 2 cut(s) 444, 1988
NspI RCATGY 5 cut(s) 215, 366, 710, 1534, 1666
PaeI GCATGC 2 cut(s) 215, 710
PagI TCATGA 3 cut(s) 2049, 2599, 2911
PaqCI CACCTGC 1 cut(s) 400
PciI ACATGT 3 cut(s) 362, 1530, 1662
PcsI WCGNNNNNNNCGW 3 cut(s) 2124, 2703, 2712
PctI GAATGC 4 cut(s) 853, 1009, 1459, 1600
PdmI GAANNNNTTC 2 cut(s) 234, 902
PfeI GAWTC 4 cut(s) 184, 485, 553, 1340
PflMI CCANNNNNTGG 3 cut(s) 1195, 1909, 2349
PkrI GCNGC 4 cut(s) 1273, 1896, 1899, 2410
PleI GAGTC 4 cut(s) 187, 196, 2204, 2939
PluTI GGCGCC 1 cut(s) 2127
PpsI GAGTC 4 cut(s) 187, 196, 2204, 2939
PscI ACATGT 3 cut(s) 362, 1530, 1662
PshAI GACNNNNGTC 1 cut(s) 1482
PshBI ATTAAT 1 cut(s) 2519
Psp1406I AACGTT 1 cut(s) 2697
Psp6I CCWGG 7 cut(s) 302, 1145, 1188, 2175, 2529, 2548, 2948
PspEI GGTNACC 1 cut(s) 1286
PspFI CCCAGC 2 cut(s) 2285, 2559
PspGI CCWGG 7 cut(s) 302, 1145, 1188, 2175, 2529, 2548, 2948
PspN4I GGNNCC 3 cut(s) 46, 2125, 2547
PspPI GGNCC 1 cut(s) 1484
PstI CTGCAG 1 cut(s) 2413
PsuI RGATCY 3 cut(s) 1129, 1556, 1726
PvuII CAGCTG 2 cut(s) 790, 2408
RsaI GTAC 4 cut(s) 1535, 1764, 2005, 2682
RsaNI GTAC 4 cut(s) 1534, 1763, 2004, 2681
RseI CAYNNNNRTG 2 cut(s) 1632, 1661
SatI GCNGC 4 cut(s) 1272, 1895, 1898, 2409
Sau96I GGNCC 1 cut(s) 1484
SchI GAGTC 4 cut(s) 188, 196, 2204, 2939
SduI GDGCHC 4 cut(s) 49, 1411, 1474, 1957
SfcI CTRYAG 1 cut(s) 2409
SfoI GGCGCC 1 cut(s) 2125
SinI GGWCC 1 cut(s) 1484
SmiMI CAYNNNNRTG 2 cut(s) 1632, 1661
SpeI ACTAGT 1 cut(s) 1957
SphI GCATGC 2 cut(s) 215, 710
SsiI CCGC 7 cut(s) 499, 725, 1103, 1294, 1847, 1894, 2905
SspDI GGCGCC 1 cut(s) 2123
SspMI CTAG 8 cut(s) 138, 1257, 1481, 1566, 1685, 1958, 2025, 2651
StyI CCWWGG 3 cut(s) 645, 1480, 2077
TaaI ACNGT 7 cut(s) 342, 702, 958, 1744, 2035, 2359, 2750
TaiI ACGT 1 cut(s) 2700
TatI WGTACW 2 cut(s) 1533, 1762
TauI GCSGC 1 cut(s) 1897
TfiI GAWTC 4 cut(s) 184, 485, 553, 1340
TscAI CASTG 5 cut(s) 121, 199, 723, 1282, 2755
TseFI GTSAC 6 cut(s) 8, 30, 199, 1286, 2171, 2894
TseI GCWGC 3 cut(s) 1271, 1897, 2408
Tsp45I GTSAC 6 cut(s) 8, 30, 199, 1286, 2171, 2894
TspGWI ACGGA 1 cut(s) 932
TspRI CASTG 5 cut(s) 121, 199, 723, 1282, 2755
Van91I CCANNNNNTGG 3 cut(s) 1195, 1909, 2349
VneI GTGCAC 1 cut(s) 1953
VpaK11BI GGWCC 1 cut(s) 1484
VspI ATTAAT 1 cut(s) 2519
XapI RAATTY 3 cut(s) 985, 1046, 2291
XbaI TCTAGA 1 cut(s) 137
XceI RCATGY 5 cut(s) 215, 366, 710, 1534, 1666
XcmI CCANNNNNNNNNTGG 1 cut(s) 1087
XmaJI CCTAGG 1 cut(s) 1480
XmiI GTMKAC 1 cut(s) 953
XmnI GAANNNNTTC 2 cut(s) 234, 902
XspI CTAG 8 cut(s) 138, 1257, 1481, 1566, 1685, 1958, 2025, 2651
Zsp2I ATGCAT 2 cut(s) 444, 1988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.