Rh2CG080400

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0012559
Physical Location & Seq
Reverse (-)
6568967 .. 6571912
2946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG080400.1

Sequence Viewer

Length: 2946 bp
ATGGAATGTGACCTAATTGCTCTGGGAATGTCACCGGGGTTTCGAGGCCTGTTACTGCCAATTTGCCAAAGACCCACTACTTATTCGGTTCGATTGCATAGCAAGATTAGTCCCAGTGTCAGGTCATTGTTGCTGTCTAGATTGAAGTCTTGTTCTTGTGCTGCTGTGAATGTTGTTGAGTCGAGTCCAATCAGTGATTTGGCTCAAAACCATACCCGGAAATTGGAGACTCAAGTAGGATTAGATAATGGGAATGTGGCTGATCAGGAAATAGTAGGAGATGATGTGAAAGCCAGGCCTTTCGTTTGGAATGGGAAGAAGAGGCTTATACGGTATTCTGGGATGCTTCGTACCTGTGCTTCACAAGGGTCTTTGAATGAGGGGAAGGCTATTCATGGGCAGGTGATAAAGAATGGGATACACCCTGATTCGCATTTGTGGGTTTCGTTGGTTAATGTTTACTCGAAATGTGGGGATTCTGCGTATGCCCGCAAAGTGCTTGGTGAGATGCCTGAACGAGATGTTGTGTCGTGGACTACTTTAATTCATGGGTTTGTGGTCAAAGGTTCTGGTGTTGATGCTGTTAATTTGTTCTGTGAGATGAAGAAAGATGGTACAAGAGCAAATGACTTTTCGTTGGCTACTGGTTTGAAAGCGTGTTCTTTGTGCTTAGATTTAAGCTTTGGAAAGCAGTTGCATGCTGAAGCAGTGAAAGCAGGGTTCTTTTCCGATGGTTTTGTTGGATCTGCTCTCGTTGATCTTTATGCAAAATGTGGTGAGATGGAACTTGCCAATAGAGTGTTATTTTGTATGCCTGAGCAGAATGTTGTATCATGGAATGCCCTGCTAAATGGGTATGCTAAGGAAGGTGATGGAAATCAAGTTCTGAAATTGTTTTGCAAAATGACGGAATCAGATATGAGGTTAAGTAAGTTCACCTTGTCTACTGTCCTTAAAGGTTGTGCAAACATAGAAAATTTGAGAGTAGGTCGGATTGTGCATTCTTTGGTTGTCAAAGTTGGGTTTGAGGTTGATGAATTCCTGGGTTGCAGTCTTGTTGATATGTATTCTAAGTGTCGAATGGCAATTGATGCAGTAAAAGTATTCAGGACGATTAAAGATCCTGATGTAGTGGCCTGGAGTGCTATTATCACTTGCCTTGATCAACAAAGGCAATACCAGGAAATGGCTCGACTATTTCGTTCAATGATAAGCACAGGCATCTCACCGAACCAATTTACCCTTTCTAGTATTATTAGTGCTGCCACTGATCTTGGAGACCTCCATTTTGGTGAGAGCATCCATGCTCTTATATGGAAATATGGCTATGAATCTGATCTTCCGGTCAGCAATGCTCTAATCACAATGTATATGAAAATTGGATGTGTGAGAAATGGTGCTCAGGTTTTTGAGGCAATGACAGAACATGATCTGATTTCATGGAATGCCCTTCTATCTGGAGCACACAACCTAGGTCCAAGAGTATTCCACCAAATGCTTGCTGAAGGTTGCAAGCCCAACATGTATTCCTTCATCAGTATTTTAAGATCCTGTTCTAGCCTCTTGGATGCAGACCTCGGGAAACAAGTGCATGCCCATATTGTCAAAACAAGCCTCCATGATAATGACTTTGTTGGGACGGCACTCATTGACATGTATGCCAAAAGTAGGTTCTTAGATGATGCTGTTATAGCTTTCAGTAGATTGAGTGATCGAGATCTTTTCACTTGGACAGTCATCATTACTGGTTATGTACAAACTGATCAAGCAGAGAAAGCTGTTGCTTGTTTCAGTCAGATGCAACAAGAAGGAGTGAAGCCAAACGAGTTCACTCTTGCTGGCTGTTTGAGTGCTTGCTCCCGTATAGCTATGCTGGAAAATGGGCGGCAGCTCCATTCGATGGCAATTAAGGCTGGGCATTTAGAAGATTTGTTTGTTGGTAGTGCACTTGTTGATATGTATGCAAAATGCGGATGCATTGCTGATGCTGAGGGTACCTTTGAGGGTTTGGCTTCCAGGGATACAGTCTCATGGAACATCATGATTTGTGGATTCTCTCAATATGGTCAAGGAGAGAAGGCTCTGGAAGCCTTTTCGACAATGTTAGATGAAGGCATCATGCCAGATGAGATCACTTTCATAGGTGTTCTTTCAGCTTGCAGTCACCTGGGTTTGGTTGAAGAAGGGAAAAAGCACTTTGTCTCGCTGAGCAAAGTTTTCCAGATCACTCCTACCATTGAGCATTATGCTTGTATGGTTGATATTCTTGGTAGTGCTGGGAAATTTGATGAGGTTGAAAGCTTTATTGTGACAATGAAACTGACACCGTATGCCATTATTTGGGAGACTGTTCTTGGAGCTTGTAAGAAGTATGGAAATGTGGATTTTGGTGAAAGTGCTGCAGGAAAGCTTTTTGAGCTTGAACCTGAGATGGATTCGACTTATATATTGCTGTCAAATATCTATGCAAATAAAGGTAGATGGGATGATGTTAGAAAAGTCAGGACATTAATGTCCAGCCAGGGTATTAAAAAGGAGCCTGGTTGTAGCTGGGTTGAAGTTGATGGACAAGTCCACACTTTTGTCTCTCATGATGGTTCACATCCAAGAACCAAGGAAATCCATCTGAAATTGGAGGAACTAGGTCAAAAGCTGACTTCAGTTGGTTATATACCAGAAACTGAGAATGTTCTTCACAATATCACTGAACAAGAAAAAGAGGAACATCTCCAATATCATAGTGAAAGGTTGGCTCTTGCGTATGCCCTTCTAAGCACCGATCCTGTAAAAACTATTCGTATTTTCAAAAATCTTCGCATATGTGGGGACTGCCATGATGTTATGAAGCTCATCTCAGATGTCATGAATAGAGAGATAATTGTTCGTGACATCAAGCGGTTTCATCATTTTAAGAATGGCACTTGCTCCTGTCAGGACTTCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 map00190 map01100 map04714
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

981

Amino Acids

108.68

Weight (kDa)

6.1

Isoelectric Point (pI)

33.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 173 - 220 1.5e-08 PPR repeat family
PPR PF01535 176 - 205 6.2e-06 PPR repeat
PPR_2 PF13041 275 - 323 7.4e-12 PPR repeat family
PPR PF01535 277 - 305 1.8e-06 PPR repeat
PPR_2 PF13041 375 - 421 4.2e-08 PPR repeat family
PPR_2 PF13041 573 - 620 2.1e-10 PPR repeat family
PPR_2 PF13041 673 - 721 3.7e-11 PPR repeat family
PPR PF01535 676 - 706 6.1e-06 PPR repeat
E_motif PF20431 791 - 853 3.9e-25 E motif
DYW_deaminase PF14432 889 - 981 3.7e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 391
AasI GACNNNNNNGTC 1 cut(s) 2512
Acc36I ACCTGC 1 cut(s) 391
Acc65I GGTACC 1 cut(s) 1994
AccB1I GGYRCC 1 cut(s) 1994
AccB7I CCANNNNNTGG 3 cut(s) 1186, 1900, 2340
AccI GTMKAC 1 cut(s) 944
AciI CCGC 4 cut(s) 490, 1885, 1971, 2896
AclWI GGATC 4 cut(s) 751, 1115, 1542, 2774
AcsI RAATTY 3 cut(s) 976, 1037, 2282
AcuI CTGAAG 3 cut(s) 723, 1524, 2643
AfaI GTAC 4 cut(s) 352, 616, 1755, 1996
AfiI CCNNNNNNNGG 7 cut(s) 120, 223, 1186, 1668, 1900, 2173, 2340
AflIII ACRYGT 2 cut(s) 1521, 1653
AgsI TTSAA 9 cut(s) 145, 376, 652, 1206, 2180, 2297, 2423, 2558, 2806
AjnI CCWGG 8 cut(s) 293, 1041, 1136, 1179, 2015, 2166, 2520, 2539
AjuI GAANNNNNNNTTGG 2 cut(s) 1655, 1687
AloI GAACNNNNNNTCC 2 cut(s) 867, 899
Alw21I GWGCWC 3 cut(s) 1402, 1465, 1948
Alw26I GTCTC 6 cut(s) 221, 1272, 2032, 2206, 2339, 2590
Alw44I GTGCAC 1 cut(s) 1944
AlwI GGATC 4 cut(s) 751, 1115, 1542, 2774
AlwNI CAGNNNCTG 1 cut(s) 2681
Ama87I CYCGRG 1 cut(s) 1577
AoxI GGCC 3 cut(s) 46, 296, 1134
ApaLI GTGCAC 1 cut(s) 1944
ApeKI GCWGC 4 cut(s) 161, 1262, 1888, 2399
ApoI RAATTY 3 cut(s) 976, 1037, 2282
ArsI GACNNNNNNTTYG 2 cut(s) 1271, 1303
AseI ATTAAT 1 cut(s) 2510
Asp718I GGTACC 1 cut(s) 1994
AspA2I CCTAGG 1 cut(s) 1471
AspS9I GGNCC 1 cut(s) 1475
AsuC2I CCSGG 2 cut(s) 36, 217
AvaI CYCGRG 1 cut(s) 1577
AvaII GGWCC 1 cut(s) 1475
AvrII CCTAGG 1 cut(s) 1471
BaeGI GKGCMC 1 cut(s) 1948
BanI GGYRCC 1 cut(s) 1994
BarI GAAGNNNNNNTAC 2 cut(s) 343, 375
Bbv12I GWGCWC 3 cut(s) 1402, 1465, 1948
BbvCI CCTCAGC 1 cut(s) 1989
BbvI GCAGC 4 cut(s) 148, 1249, 1900, 2386
BceAI ACGGC 1 cut(s) 1656
BciT130I CCWGG 8 cut(s) 295, 1043, 1138, 1181, 2017, 2168, 2522, 2541
BciVI GTATCC 2 cut(s) 411, 2014
BclI TGATCA 3 cut(s) 262, 1162, 1762
BcnI CCSGG 2 cut(s) 36, 217
BcoDI GTCTC 6 cut(s) 221, 1272, 2032, 2206, 2339, 2590
BfaI CTAG 5 cut(s) 138, 1248, 1472, 1557, 2642
BfmI CTRYAG 1 cut(s) 2400
BfuAI ACCTGC 1 cut(s) 391
BfuI GTATCC 2 cut(s) 411, 2014
BglII AGATCT 1 cut(s) 1717
BisI GCNGC 5 cut(s) 162, 1263, 1886, 1889, 2400
BlnI CCTAGG 1 cut(s) 1471
BlpI GCTNAGC 1 cut(s) 2207
BlsI GCNGC 5 cut(s) 163, 1264, 1887, 1890, 2401
Bme18I GGWCC 1 cut(s) 1475
BmeT110I CYCGRG 1 cut(s) 1577
BmgT120I GGNCC 1 cut(s) 1475
BmiI GGNNCC 2 cut(s) 1996, 2538
BmrI ACTGGG 1 cut(s) 108
BmuI ACTGGG 1 cut(s) 108
BpmI CTGGAG 2 cut(s) 1159, 1479
Bpu10I CCTNAGC 4 cut(s) 816, 861, 1401, 1989
Bpu1102I GCTNAGC 1 cut(s) 2207
BpuEI CTTGAG 1 cut(s) 216
BpuMI CCSGG 2 cut(s) 36, 217
BsaBI GATNNNNATC 2 cut(s) 876, 1716
BsaI GGTCTC 1 cut(s) 1272
BsaJI CCNNGG 8 cut(s) 35, 1042, 1471, 1576, 2016, 2167, 2521, 2613
BsaWI WCCGGW 1 cut(s) 1342
BsaXI ACNNNNNCTCC 2 cut(s) 270, 300
Bsc4I CCNNNNNNNGG 7 cut(s) 120, 223, 1186, 1668, 1900, 2173, 2340
Bse1I ACTGG 3 cut(s) 114, 649, 1750
Bse3DI GCAATG 3 cut(s) 1357, 1422, 1977
Bse8I GATNNNNATC 2 cut(s) 876, 1716
BseBI CCWGG 8 cut(s) 295, 1043, 1138, 1181, 2017, 2168, 2522, 2541
BseDI CCNNGG 8 cut(s) 35, 1042, 1471, 1576, 2016, 2167, 2521, 2613
BseGI GGATG 7 cut(s) 348, 1299, 1388, 1573, 1979, 2491, 2602
BseJI GATNNNNATC 2 cut(s) 876, 1716
BseLI CCNNNNNNNGG 7 cut(s) 120, 223, 1186, 1668, 1900, 2173, 2340
BseMI GCAATG 3 cut(s) 1357, 1422, 1977
BseMII CTCAG 7 cut(s) 807, 1415, 1980, 2198, 2418, 2673, 2868
BseNI ACTGG 3 cut(s) 114, 649, 1750
BseSI GKGCMC 1 cut(s) 1948
BseXI GCAGC 4 cut(s) 148, 1249, 1900, 2386
BseYI CCCAGC 3 cut(s) 1913, 2276, 2550
BshFI GGCC 3 cut(s) 48, 298, 1136
BshNI GGYRCC 1 cut(s) 1994
BsiHKAI GWGCWC 3 cut(s) 1402, 1465, 1948
BsiHKCI CYCGRG 1 cut(s) 1577
BsiSI CCGG 3 cut(s) 35, 217, 1343
BslFI GGGAC 3 cut(s) 96, 1651, 2840
BslI CCNNNNNNNGG 7 cut(s) 120, 223, 1186, 1668, 1900, 2173, 2340
BsmAI GTCTC 6 cut(s) 221, 1272, 2032, 2206, 2339, 2590
BsmFI GGGAC 3 cut(s) 96, 1651, 2840
BsmI GAATGC 3 cut(s) 844, 1000, 1450
BsnI GGCC 3 cut(s) 48, 298, 1136
Bso31I GGTCTC 1 cut(s) 1272
BsoBI CYCGRG 1 cut(s) 1577
Bsp1286I GDGCHC 3 cut(s) 1402, 1465, 1948
Bsp1407I TGTACA 1 cut(s) 1753
Bsp1720I GCTNAGC 1 cut(s) 2207
BspACI CCGC 4 cut(s) 490, 1885, 1971, 2896
BspANI GGCC 3 cut(s) 48, 298, 1136
BspCNI CTCAG 7 cut(s) 808, 1414, 1981, 2199, 2419, 2674, 2867
BspHI TCATGA 3 cut(s) 2040, 2590, 2862
BspLI GGNNCC 2 cut(s) 1996, 2538
BspMAI CTGCAG 1 cut(s) 2404
BspMI ACCTGC 1 cut(s) 391
BspPI GGATC 4 cut(s) 751, 1115, 1542, 2774
BspT107I GGYRCC 1 cut(s) 1994
BspTNI GGTCTC 1 cut(s) 1272
BsrDI GCAATG 3 cut(s) 1357, 1422, 1977
BsrGI TGTACA 1 cut(s) 1753
BsrI ACTGG 3 cut(s) 114, 649, 1750
BssECI CCNNGG 8 cut(s) 35, 1042, 1471, 1576, 2016, 2167, 2521, 2613
BssT1I CCWWGG 2 cut(s) 1471, 2613
Bst2UI CCWGG 8 cut(s) 295, 1043, 1138, 1181, 2017, 2168, 2522, 2541
Bst4CI ACNGT 6 cut(s) 333, 949, 1735, 2026, 2328, 2350
Bst6I CTCTTC 1 cut(s) 314
BstAPI GCANNNNNTGC 1 cut(s) 1091
BstAUI TGTACA 1 cut(s) 1753
BstC8I GCNNGC 8 cut(s) 490, 699, 1500, 1514, 1593, 1840, 1855, 2158
BstF5I GGATG 7 cut(s) 348, 1299, 1388, 1573, 1979, 2491, 2602
BstMAI GTCTC 6 cut(s) 221, 1272, 2032, 2206, 2339, 2590
BstMWI GCNNNNNNNGC 8 cut(s) 713, 1091, 1142, 1691, 1775, 1910, 2087, 2416
BstNI CCWGG 8 cut(s) 295, 1043, 1138, 1181, 2017, 2168, 2522, 2541
BstNSI RCATGY 4 cut(s) 701, 1525, 1595, 1657
BstSFI CTRYAG 1 cut(s) 2400
BstSLI GKGCMC 1 cut(s) 1948
BstV1I GCAGC 4 cut(s) 148, 1249, 1900, 2386
BstX2I RGATCY 4 cut(s) 743, 1120, 1547, 1717
BstYI RGATCY 4 cut(s) 743, 1120, 1547, 1717
BsuI GTATCC 2 cut(s) 411, 2014
BsuRI GGCC 3 cut(s) 48, 298, 1136
BtsCI GGATG 7 cut(s) 348, 1299, 1388, 1573, 1979, 2491, 2602
BtsI GCAGTG 1 cut(s) 714
BtsIMutI CAGTG 5 cut(s) 121, 199, 714, 1266, 2703
BveI ACCTGC 1 cut(s) 391
Cac8I GCNNGC 8 cut(s) 490, 699, 1500, 1514, 1593, 1840, 1855, 2158
CaiI CAGNNNCTG 1 cut(s) 2681
CciI TCATGA 3 cut(s) 2040, 2590, 2862
Cfr13I GGNCC 1 cut(s) 1475
Csp6I GTAC 4 cut(s) 351, 615, 1754, 1995
CspCI CAANNNNNGTGG 2 cut(s) 1255, 1290
CviQI GTAC 4 cut(s) 351, 615, 1754, 1995
DrdI GACNNNNNNGTC 1 cut(s) 2512
DseDI GACNNNNNNGTC 1 cut(s) 2512
Eam1104I CTCTTC 1 cut(s) 314
EarI CTCTTC 1 cut(s) 314
Eco130I CCWWGG 2 cut(s) 1471, 2613
Eco147I AGGCCT 2 cut(s) 48, 298
Eco31I GGTCTC 1 cut(s) 1272
Eco47I GGWCC 1 cut(s) 1475
Eco57I CTGAAG 3 cut(s) 723, 1524, 2643
Eco88I CYCGRG 1 cut(s) 1577
EcoRI GAATTC 1 cut(s) 1037
EcoRII CCWGG 8 cut(s) 293, 1041, 1136, 1179, 2015, 2166, 2520, 2539
EcoT14I CCWWGG 2 cut(s) 1471, 2613
EcoT22I ATGCAT 1 cut(s) 1979
ErhI CCWWGG 2 cut(s) 1471, 2613
FalI AAGNNNNNCTT 2 cut(s) 923, 955
FaqI GGGAC 3 cut(s) 96, 1651, 2840
FauI CCCGC 1 cut(s) 497
FauNDI CATATG 1 cut(s) 2819
FbaI TGATCA 3 cut(s) 262, 1162, 1762
FblI GTMKAC 1 cut(s) 944
Fnu4HI GCNGC 5 cut(s) 162, 1263, 1886, 1889, 2400
FokI GGATG 7 cut(s) 355, 1286, 1395, 1580, 1986, 2498, 2589
Fsp4HI GCNGC 5 cut(s) 162, 1263, 1886, 1889, 2400
FspBI CTAG 5 cut(s) 138, 1248, 1472, 1557, 2642
GluI GCNGC 5 cut(s) 162, 1263, 1886, 1889, 2400
GsaI CCCAGC 3 cut(s) 1917, 2280, 2554
GsuI CTGGAG 2 cut(s) 1159, 1479
HaeIII GGCC 3 cut(s) 48, 298, 1136
HapII CCGG 3 cut(s) 35, 217, 1343
HindIII AAGCTT 3 cut(s) 679, 2299, 2408
HinfI GANTC 9 cut(s) 179, 184, 229, 428, 476, 911, 1331, 2052, 2435
HpaII CCGG 3 cut(s) 35, 217, 1343
Hpy166II GTNNAC 8 cut(s) 460, 534, 936, 945, 1830, 1946, 2575, 2600
Hpy188I TCNGA 9 cut(s) 730, 888, 916, 993, 1336, 1434, 1797, 2628, 2857
Hpy8I GTNNAC 8 cut(s) 460, 534, 936, 945, 1830, 1946, 2575, 2600
HpyCH4III ACNGT 6 cut(s) 333, 949, 1735, 2026, 2328, 2350
HpyF10VI GCNNNNNNNGC 8 cut(s) 713, 1091, 1142, 1691, 1775, 1910, 2087, 2416
KpnI GGTACC 1 cut(s) 1998
Ksp22I TGATCA 3 cut(s) 262, 1162, 1762
LmnI GCTCC 6 cut(s) 1460, 1862, 1896, 2357, 2536, 2930
Lsp1109I GCAGC 4 cut(s) 148, 1249, 1900, 2386
MaeI CTAG 5 cut(s) 138, 1248, 1472, 1557, 2642
MaeIII GTNAC 6 cut(s) 8, 30, 51, 2162, 2308, 2885
MboII GAAGA 8 cut(s) 328, 331, 616, 1331, 1937, 2192, 2684, 2804
MfeI CAATTG 1 cut(s) 1086
MflI RGATCY 4 cut(s) 743, 1120, 1547, 1717
MhlI GDGCHC 3 cut(s) 1402, 1465, 1948
MlyI GAGTC 3 cut(s) 188, 193, 223
MmeI TCCRAC 2 cut(s) 721, 971
Mph1103I ATGCAT 1 cut(s) 1979
MslI CAYNNNNRTG 3 cut(s) 1290, 1623, 1652
MspI CCGG 3 cut(s) 35, 217, 1343
MunI CAATTG 1 cut(s) 1086
Mva1269I GAATGC 3 cut(s) 844, 1000, 1450
MvaI CCWGG 8 cut(s) 295, 1043, 1138, 1181, 2017, 2168, 2522, 2541
MwoI GCNNNNNNNGC 8 cut(s) 713, 1091, 1142, 1691, 1775, 1910, 2087, 2416
NciI CCSGG 2 cut(s) 36, 217
NdeI CATATG 1 cut(s) 2819
NlaIV GGNNCC 2 cut(s) 1996, 2538
NmuCI GTSAC 5 cut(s) 8, 30, 2162, 2308, 2885
NsiI ATGCAT 1 cut(s) 1979
NspI RCATGY 4 cut(s) 701, 1525, 1595, 1657
PaeI GCATGC 2 cut(s) 701, 1595
PagI TCATGA 3 cut(s) 2040, 2590, 2862
PaqCI CACCTGC 1 cut(s) 391
PceI AGGCCT 2 cut(s) 48, 298
PciI ACATGT 2 cut(s) 1521, 1653
PcsI WCGNNNNNNNCGW 1 cut(s) 1198
PctI GAATGC 3 cut(s) 844, 1000, 1450
PfeI GAWTC 6 cut(s) 428, 476, 911, 1331, 2052, 2435
PflMI CCANNNNNTGG 3 cut(s) 1186, 1900, 2340
PkrI GCNGC 5 cut(s) 163, 1264, 1887, 1890, 2401
PleI GAGTC 3 cut(s) 187, 192, 223
PpsI GAGTC 3 cut(s) 187, 192, 223
PscI ACATGT 2 cut(s) 1521, 1653
PshBI ATTAAT 1 cut(s) 2510
Psp6I CCWGG 8 cut(s) 293, 1041, 1136, 1179, 2015, 2166, 2520, 2539
PspFI CCCAGC 3 cut(s) 1913, 2276, 2550
PspGI CCWGG 8 cut(s) 293, 1041, 1136, 1179, 2015, 2166, 2520, 2539
PspN4I GGNNCC 2 cut(s) 1996, 2538
PspPI GGNCC 1 cut(s) 1475
PstI CTGCAG 1 cut(s) 2404
PstNI CAGNNNCTG 1 cut(s) 2681
PsuI RGATCY 4 cut(s) 743, 1120, 1547, 1717
RsaI GTAC 4 cut(s) 352, 616, 1755, 1996
RsaNI GTAC 4 cut(s) 351, 615, 1754, 1995
RseI CAYNNNNRTG 3 cut(s) 1290, 1623, 1652
SatI GCNGC 5 cut(s) 162, 1263, 1886, 1889, 2400
Sau96I GGNCC 1 cut(s) 1475
SchI GAGTC 3 cut(s) 188, 193, 223
SduI GDGCHC 3 cut(s) 1402, 1465, 1948
SfcI CTRYAG 1 cut(s) 2400
SinI GGWCC 1 cut(s) 1475
SmiMI CAYNNNNRTG 3 cut(s) 1290, 1623, 1652
SmlI CTYRAG 1 cut(s) 231
SmoI CTYRAG 1 cut(s) 231
SphI GCATGC 2 cut(s) 701, 1595
SseBI AGGCCT 2 cut(s) 48, 298
SsiI CCGC 4 cut(s) 490, 1885, 1971, 2896
SspMI CTAG 5 cut(s) 138, 1248, 1472, 1557, 2642
StuI AGGCCT 2 cut(s) 48, 298
StyI CCWWGG 2 cut(s) 1471, 2613
TaaI ACNGT 6 cut(s) 333, 949, 1735, 2026, 2328, 2350
TatI WGTACW 1 cut(s) 1753
TauI GCSGC 1 cut(s) 1888
TfiI GAWTC 6 cut(s) 428, 476, 911, 1331, 2052, 2435
TscAI CASTG 5 cut(s) 121, 199, 714, 1273, 2710
TseFI GTSAC 5 cut(s) 8, 30, 2162, 2308, 2885
TseI GCWGC 4 cut(s) 161, 1262, 1888, 2399
Tsp45I GTSAC 5 cut(s) 8, 30, 2162, 2308, 2885
TspGWI ACGGA 1 cut(s) 923
TspRI CASTG 5 cut(s) 121, 199, 714, 1273, 2710
Van91I CCANNNNNTGG 3 cut(s) 1186, 1900, 2340
VneI GTGCAC 1 cut(s) 1944
VpaK11BI GGWCC 1 cut(s) 1475
VspI ATTAAT 1 cut(s) 2510
XapI RAATTY 3 cut(s) 976, 1037, 2282
XbaI TCTAGA 1 cut(s) 137
XceI RCATGY 4 cut(s) 701, 1525, 1595, 1657
XmaJI CCTAGG 1 cut(s) 1471
XmiI GTMKAC 1 cut(s) 944
XspI CTAG 5 cut(s) 138, 1248, 1472, 1557, 2642
Zsp2I ATGCAT 1 cut(s) 1979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.