RLG00000016354

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0012559
Physical Location & Seq
Reverse (-)
5865756 .. 5868536
2781 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016354

Sequence Viewer

Length: 2499 bp
ATGAATGTTGTTGAGTCGAGTCCAATCAGTGATTTGGCTCAAAACCATACCCGAAAATTGGAGACTCAAGTAGGATTAGATAATAGGAATGTGGGTGATCAGGAAATAGTAGGAGATGATGTGAAAGCCAGGCCTTTCGTTTGGAATGGGAAGAAGAGGCTTATACGGTATTCTGGGATGCTTCGTACCTGTGCTTCACAAGGGTCTTTGAATGAGGGGAAGGCTATTCATGGGCAGGTGATAAAGAATGGGATACACCCTGATTCGCATTTGTGGGTTTCATTGGTTAATGTTTACTCGAAATGTGGGGATTCTGTGTATGCCCGCAAAGTGCTTGGTGAGATGCCTGAACGAGATGTTGTGTCGTGGACTACTTTGATTCATGGGTTTGTGGTCAAAGGTTCTGGTGTTGATGCTGTTAATTTGTTCTGTGAGATGAAGAAAGATGGTACAAGAGCAAATGACTTTTCACTGGCTACTGGTTTGAAAGCGTGTTCTTTGTGCTTAGATCTTAGCTTTGGAAAGCAACTGCATGCTGAAGCAGTGAAGGCGGGGTTCTTTTCTGATGGATTTGTTGGGTCTGCTCTTGTTGATCTTTATGCAAAATGTGGTGAGATGGAACTTGCCAATAGAGTGTTATTTTGTATGCCTGCGCAGAATGTTGTATCATGGAATGCCCTGCTAAATGGGTATGCTCAGGAAGGTGATGGAAATCAAGTTCTGAAATTGTTTTGCAAAATGACGGAATCAGATATGAGGTTAAGTAAGTTCACCTTGTCTACTGTCCTTAAAGGTTGTGCAAACATGGAAAATTTGAGAGTAGGTCGGGTTGTGCATTCTTTGGTTGTCAAAGTTGGGTTTGAGGTTGATGAATTCCTGGGTTGCAGTCTTGTTGATATGTATTCTAAGTGTCGAATGGCAATTGATGCAGTAAAAGTATTCAGGACGATTAAAGATCCTGATGTAGTGGCCTGGAGCGCTATCATCACTTGCCTTGATCAACAAAGGCAATACCAGGAAATGGCTCAACTATTTCGTTCAATGATAAGCACAGGCATCTCACCGAACCAATTTACCCTTTCTAGTATTATTAGTGCTGCCACTGATCTTGGAGACCTCCATTTTGGTGAGAGCATCCATGCTCTTATATGGAAATATGGCTATGAATCTGATCTTCCAGTCAGCAATGCTCTAATCACAATGTATATGAAAATTGGATGTGTGAGAAATGGTGCTCAGGTTTTTGAGGCAATGACAGAACATGATCTGATTTCATGGAATGCCCTTCTATCTGGAGCACACGACCTATGTCCAAGAGTATTCCACCAAATGCTTGCTGAAGGTTGCAAGCCCAACTTGTATTCCTTCATCAGTATTTTAAGATCCTGTTCTAGCCTCTTGGATGCTGACCTCGGGAAACAAGTGCATGCCCATATTGTCAAAACAAGCCTCCATGATAATGACTTTGTTGGGACGGCTCTCATTGACATGTATGCCAAAAGCAGGTTCTTAGATGATGCTGTTATAGCTTTCAGTAGATTGAGTAACCGAGATCTTTTCACTTGGACAGTCATCATTACTGGTTATGTACAAACTGATCAAGCAGAGAAAGCTGTTGCTTGTTTTAGTCAGATGCAACAAGAAGGAGTGAAGCCAAACGAGTTCACTCTTGCTGGCTGTTTGAGTGCTTGCTCCCGTATAGCTATGCTGGAAAATGGGCGGCAGCTCCATTCGATGGCAATTAAGGCTGGGCATTTAGAAGATTTGTTTGTTGGTAGTGCACTCGTTAATATGTATGCAAAATGTGGATGCATAGCTGATGCTGAGGGTACCTTTGAGGGTTTGGCTTCCAGGGATACAGTCTCATGGAACATCATGATTTGTGGATACTCTCAATATGGTCAAGGAGAGAAGGCTCTGGAAGCCTTTTCGACAATGTTAGACGAAGGCGTCATGCCGGATGAGATCACTTTCATAGGTGTTCTTTCAGCTTGCAGTCACCTGGGTTTGGTCGAAGAAGGGAAAAAGCACTTTGACTCGCTCAGCAAAGTTTTCCAGATCACTCCTACCATTGAGCATTATGCTTGTATGGTTGATATTCTTGGTAGTGCTGGGAAATTTGATGAGGTTGAAAGCTTTATTGTGACAATGAAACTGACACCGTATGCCATTATTTGGGAGACTGTTCTTGGAGCTTGTCAAAAGCTGACTTCAGTTGGTTATATACCAGAAACTGAGAATGTTCTTCACAATATCACTGAACAAGAAAAAGAGGAACATCTCCAATATCATAGTGAAAGGTTGGCTCTTGCATATGCCCTTCTAAGCACCGATCCTGTAAAAACTATTCGTATTTTCAAAAATCTTCGCATATGTGGGGACTGCCATGATGTTATGAAGCTCATCTCAGATGTCATGAATAGAGAGATAATTGTTCGTGACATCAAGCGGTTTCATCATTTTAAGAACGGCACTTGCTCCTGTCAGGACTTCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 map00190 map01100 map04714
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

833

Amino Acids

92.21

Weight (kDa)

5.82

Isoelectric Point (pI)

30.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 118 - 165 1.3e-08 PPR repeat family
PPR PF01535 121 - 150 5.1e-06 PPR repeat
PPR_2 PF13041 220 - 268 1.7e-11 PPR repeat family
PPR PF01535 222 - 250 3.2e-06 PPR repeat
PPR_2 PF13041 320 - 366 3.6e-08 PPR repeat family
PPR_2 PF13041 518 - 565 1.7e-10 PPR repeat family
PPR_2 PF13041 618 - 666 9.4e-12 PPR repeat family
PPR PF01535 621 - 651 1.4e-06 PPR repeat
DYW_deaminase PF14432 740 - 832 3e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 226
AasI GACNNNNNNGTC 1 cut(s) 1949
Acc16I TGCGCA 1 cut(s) 654
Acc36I ACCTGC 2 cut(s) 226, 1494
Acc65I GGTACC 1 cut(s) 1829
AccB1I GGYRCC 1 cut(s) 1829
AccB7I CCANNNNNTGG 3 cut(s) 1021, 1735, 2175
AccI GTMKAC 1 cut(s) 779
AciI CCGC 4 cut(s) 325, 551, 1720, 2449
AclWI GGATC 3 cut(s) 950, 1377, 2327
AcsI RAATTY 3 cut(s) 811, 872, 2117
AcuI CTGAAG 3 cut(s) 558, 1359, 2196
AcyI GRCGYC 1 cut(s) 1950
AfaI GTAC 4 cut(s) 187, 451, 1590, 1831
AfeI AGCGCT 1 cut(s) 979
AfiI CCNNNNNNNGG 6 cut(s) 58, 1021, 1503, 1735, 2008, 2175
AflIII ACRYGT 1 cut(s) 1488
AgsI TTSAA 5 cut(s) 211, 487, 1041, 2132, 2359
AjnI CCWGG 6 cut(s) 128, 876, 971, 1014, 1850, 2001
AjuI GAANNNNNNNTTGG 2 cut(s) 1490, 1522
AloI GAACNNNNNNTCC 2 cut(s) 702, 734
Alw21I GWGCWC 3 cut(s) 1237, 1300, 1783
Alw26I GTCTC 4 cut(s) 56, 1107, 1867, 2174
Alw44I GTGCAC 1 cut(s) 1779
AlwI GGATC 3 cut(s) 950, 1377, 2327
AlwNI CAGNNNCTG 1 cut(s) 2234
Ama87I CYCGRG 1 cut(s) 1412
Aor51HI AGCGCT 1 cut(s) 979
AoxI GGCC 2 cut(s) 131, 969
ApaLI GTGCAC 1 cut(s) 1779
ApeKI GCWGC 2 cut(s) 1097, 1723
ApoI RAATTY 3 cut(s) 811, 872, 2117
ArsI GACNNNNNNTTYG 2 cut(s) 1106, 1138
Asp718I GGTACC 1 cut(s) 1829
AspLEI GCGC 2 cut(s) 655, 980
AsuHPI GGTGA 9 cut(s) 107, 250, 350, 623, 716, 763, 1053, 1139, 1991
AvaI CYCGRG 1 cut(s) 1412
BaeGI GKGCMC 1 cut(s) 1783
BanI GGYRCC 1 cut(s) 1829
BarI GAAGNNNNNNTAC 2 cut(s) 178, 210
Bbv12I GWGCWC 3 cut(s) 1237, 1300, 1783
BbvCI CCTCAGC 1 cut(s) 1824
BbvI GCAGC 2 cut(s) 1084, 1735
BccI CCATC 5 cut(s) 440, 560, 610, 701, 1729
BceAI ACGGC 2 cut(s) 1491, 2485
BciT130I CCWGG 6 cut(s) 130, 878, 973, 1016, 1852, 2003
BciVI GTATCC 3 cut(s) 246, 1849, 1880
BclI TGATCA 3 cut(s) 97, 997, 1597
BcoDI GTCTC 4 cut(s) 56, 1107, 1867, 2174
BfaI CTAG 2 cut(s) 1083, 1392
BfoI RGCGCY 1 cut(s) 981
BfuAI ACCTGC 2 cut(s) 226, 1494
BfuI GTATCC 3 cut(s) 246, 1849, 1880
BglII AGATCT 2 cut(s) 508, 1552
BisI GCNGC 3 cut(s) 1098, 1721, 1724
BlpI GCTNAGC 1 cut(s) 2042
BlsI GCNGC 3 cut(s) 1099, 1722, 1725
Bme1390I CCNGG 6 cut(s) 130, 878, 973, 1016, 1852, 2003
BmeT110I CYCGRG 1 cut(s) 1412
BmiI GGNNCC 1 cut(s) 1831
BmrFI CCNGG 6 cut(s) 130, 878, 973, 1016, 1852, 2003
BoxI GACNNNNGTC 1 cut(s) 1308
BpmI CTGGAG 2 cut(s) 994, 1314
Bpu10I CCTNAGC 3 cut(s) 696, 1236, 1824
Bpu1102I GCTNAGC 1 cut(s) 2042
BpuEI CTTGAG 1 cut(s) 51
BsaBI GATNNNNATC 1 cut(s) 711
BsaHI GRCGYC 1 cut(s) 1950
BsaI GGTCTC 1 cut(s) 1107
BsaJI CCNNGG 4 cut(s) 877, 1411, 1851, 2002
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bsc4I CCNNNNNNNGG 6 cut(s) 58, 1021, 1503, 1735, 2008, 2175
Bse1I ACTGG 4 cut(s) 477, 484, 1178, 1585
Bse3DI GCAATG 2 cut(s) 1192, 1257
Bse8I GATNNNNATC 1 cut(s) 711
BseBI CCWGG 6 cut(s) 130, 878, 973, 1016, 1852, 2003
BseDI CCNNGG 4 cut(s) 877, 1411, 1851, 2002
BseGI GGATG 6 cut(s) 183, 1134, 1223, 1408, 1814, 1966
BseJI GATNNNNATC 1 cut(s) 711
BseLI CCNNNNNNNGG 6 cut(s) 58, 1021, 1503, 1735, 2008, 2175
BseMI GCAATG 2 cut(s) 1192, 1257
BseMII CTCAG 6 cut(s) 710, 1250, 1815, 2056, 2226, 2421
BseNI ACTGG 4 cut(s) 477, 484, 1178, 1585
BseSI GKGCMC 1 cut(s) 1783
BseXI GCAGC 2 cut(s) 1084, 1735
BseYI CCCAGC 2 cut(s) 1748, 2111
BshFI GGCC 2 cut(s) 133, 971
BshNI GGYRCC 1 cut(s) 1829
BsiHKAI GWGCWC 3 cut(s) 1237, 1300, 1783
BsiHKCI CYCGRG 1 cut(s) 1412
BsiSI CCGG 1 cut(s) 1958
BslFI GGGAC 2 cut(s) 1486, 2393
BslI CCNNNNNNNGG 6 cut(s) 58, 1021, 1503, 1735, 2008, 2175
BsmAI GTCTC 4 cut(s) 56, 1107, 1867, 2174
BsmFI GGGAC 2 cut(s) 1486, 2393
BsmI GAATGC 3 cut(s) 679, 835, 1285
BsnI GGCC 2 cut(s) 133, 971
Bso31I GGTCTC 1 cut(s) 1107
BsoBI CYCGRG 1 cut(s) 1412
Bsp1286I GDGCHC 3 cut(s) 1237, 1300, 1783
Bsp1407I TGTACA 1 cut(s) 1588
Bsp1720I GCTNAGC 1 cut(s) 2042
BspACI CCGC 4 cut(s) 325, 551, 1720, 2449
BspANI GGCC 2 cut(s) 133, 971
BspCNI CTCAG 6 cut(s) 709, 1249, 1816, 2055, 2227, 2420
BspHI TCATGA 2 cut(s) 1875, 2415
BspLI GGNNCC 1 cut(s) 1831
BspMI ACCTGC 2 cut(s) 226, 1494
BspPI GGATC 3 cut(s) 950, 1377, 2327
BspT107I GGYRCC 1 cut(s) 1829
BspTNI GGTCTC 1 cut(s) 1107
BsrDI GCAATG 2 cut(s) 1192, 1257
BsrGI TGTACA 1 cut(s) 1588
BsrI ACTGG 4 cut(s) 477, 484, 1178, 1585
BssECI CCNNGG 4 cut(s) 877, 1411, 1851, 2002
BssNI GRCGYC 1 cut(s) 1950
Bst2UI CCWGG 6 cut(s) 130, 878, 973, 1016, 1852, 2003
Bst4CI ACNGT 6 cut(s) 168, 784, 1570, 1861, 2163, 2185
Bst6I CTCTTC 1 cut(s) 149
BstACI GRCGYC 1 cut(s) 1950
BstAPI GCANNNNNTGC 1 cut(s) 926
BstAUI TGTACA 1 cut(s) 1588
BstC8I GCNNGC 9 cut(s) 325, 534, 651, 1335, 1349, 1428, 1675, 1690, 1993
BstF5I GGATG 6 cut(s) 183, 1134, 1223, 1408, 1814, 1966
BstH2I RGCGCY 1 cut(s) 981
BstHHI GCGC 2 cut(s) 655, 980
BstMAI GTCTC 4 cut(s) 56, 1107, 1867, 2174
BstMWI GCNNNNNNNGC 7 cut(s) 548, 926, 977, 1526, 1610, 1745, 1922
BstNI CCWGG 6 cut(s) 130, 878, 973, 1016, 1852, 2003
BstNSI RCATGY 3 cut(s) 536, 1430, 1492
BstPAI GACNNNNGTC 1 cut(s) 1308
BstSCI CCNGG 6 cut(s) 128, 876, 971, 1014, 1850, 2001
BstSLI GKGCMC 1 cut(s) 1783
BstV1I GCAGC 2 cut(s) 1084, 1735
BstX2I RGATCY 4 cut(s) 508, 955, 1382, 1552
BstYI RGATCY 4 cut(s) 508, 955, 1382, 1552
BsuI GTATCC 3 cut(s) 246, 1849, 1880
BsuRI GGCC 2 cut(s) 133, 971
BtsCI GGATG 6 cut(s) 183, 1134, 1223, 1408, 1814, 1966
BtsI GCAGTG 1 cut(s) 549
BtsIMutI CAGTG 5 cut(s) 34, 470, 549, 1101, 2256
BveI ACCTGC 2 cut(s) 226, 1494
Cac8I GCNNGC 9 cut(s) 325, 534, 651, 1335, 1349, 1428, 1675, 1690, 1993
CaiI CAGNNNCTG 1 cut(s) 2234
CciI TCATGA 2 cut(s) 1875, 2415
CfoI GCGC 2 cut(s) 655, 980
CseI GACGC 1 cut(s) 1939
Csp6I GTAC 4 cut(s) 186, 450, 1589, 1830
CspCI CAANNNNNGTGG 2 cut(s) 1090, 1125
CviQI GTAC 4 cut(s) 186, 450, 1589, 1830
DrdI GACNNNNNNGTC 1 cut(s) 1949
DseDI GACNNNNNNGTC 1 cut(s) 1949
Eam1104I CTCTTC 1 cut(s) 149
EarI CTCTTC 1 cut(s) 149
Eco147I AGGCCT 1 cut(s) 133
Eco31I GGTCTC 1 cut(s) 1107
Eco47III AGCGCT 1 cut(s) 979
Eco57I CTGAAG 3 cut(s) 558, 1359, 2196
Eco88I CYCGRG 1 cut(s) 1412
EcoRI GAATTC 1 cut(s) 872
EcoRII CCWGG 6 cut(s) 128, 876, 971, 1014, 1850, 2001
EcoT22I ATGCAT 1 cut(s) 1814
FalI AAGNNNNNCTT 4 cut(s) 758, 790, 1340, 1372
FaqI GGGAC 2 cut(s) 1486, 2393
FauI CCCGC 2 cut(s) 332, 544
FauNDI CATATG 2 cut(s) 2314, 2372
FbaI TGATCA 3 cut(s) 97, 997, 1597
FblI GTMKAC 1 cut(s) 779
Fnu4HI GCNGC 3 cut(s) 1098, 1721, 1724
FokI GGATG 6 cut(s) 190, 1121, 1230, 1415, 1821, 1973
Fsp4HI GCNGC 3 cut(s) 1098, 1721, 1724
FspBI CTAG 2 cut(s) 1083, 1392
FspI TGCGCA 1 cut(s) 654
GlaI GCGC 2 cut(s) 654, 979
GluI GCNGC 3 cut(s) 1098, 1721, 1724
GsaI CCCAGC 2 cut(s) 1752, 2115
GsuI CTGGAG 2 cut(s) 994, 1314
HaeII RGCGCY 1 cut(s) 981
HaeIII GGCC 2 cut(s) 133, 971
HapII CCGG 1 cut(s) 1958
HgaI GACGC 1 cut(s) 1939
HhaI GCGC 2 cut(s) 655, 980
Hin1I GRCGYC 1 cut(s) 1950
Hin6I GCGC 2 cut(s) 653, 978
HinP1I GCGC 2 cut(s) 653, 978
HindIII AAGCTT 1 cut(s) 2134
HinfI GANTC 9 cut(s) 14, 19, 64, 263, 311, 379, 746, 1166, 2036
HpaII CCGG 1 cut(s) 1958
HphI GGTGA 9 cut(s) 107, 250, 350, 623, 716, 763, 1053, 1139, 1991
Hpy166II GTNNAC 6 cut(s) 295, 369, 771, 780, 1665, 1781
Hpy188I TCNGA 7 cut(s) 565, 723, 751, 1171, 1269, 1632, 2410
Hpy8I GTNNAC 6 cut(s) 295, 369, 771, 780, 1665, 1781
HpyCH4III ACNGT 6 cut(s) 168, 784, 1570, 1861, 2163, 2185
HpyF10VI GCNNNNNNNGC 7 cut(s) 548, 926, 977, 1526, 1610, 1745, 1922
Hsp92I GRCGYC 1 cut(s) 1950
HspAI GCGC 2 cut(s) 653, 978
KpnI GGTACC 1 cut(s) 1833
Ksp22I TGATCA 3 cut(s) 97, 997, 1597
LmnI GCTCC 6 cut(s) 975, 1295, 1697, 1731, 2192, 2483
Lsp1109I GCAGC 2 cut(s) 1084, 1735
MaeI CTAG 2 cut(s) 1083, 1392
MaeIII GTNAC 4 cut(s) 1544, 1997, 2143, 2438
MboII GAAGA 8 cut(s) 163, 166, 451, 1166, 1772, 2027, 2237, 2357
MfeI CAATTG 1 cut(s) 921
MflI RGATCY 4 cut(s) 508, 955, 1382, 1552
MhlI GDGCHC 3 cut(s) 1237, 1300, 1783
MlyI GAGTC 4 cut(s) 23, 28, 58, 2030
Mph1103I ATGCAT 1 cut(s) 1814
MseI TTAA 9 cut(s) 288, 420, 761, 789, 951, 1379, 1743, 1788, 2463
MslI CAYNNNNRTG 3 cut(s) 1125, 1458, 1487
MspI CCGG 1 cut(s) 1958
MspR9I CCNGG 6 cut(s) 130, 878, 973, 1016, 1852, 2003
MunI CAATTG 1 cut(s) 921
Mva1269I GAATGC 3 cut(s) 679, 835, 1285
MvaI CCWGG 6 cut(s) 130, 878, 973, 1016, 1852, 2003
MwoI GCNNNNNNNGC 7 cut(s) 548, 926, 977, 1526, 1610, 1745, 1922
NdeI CATATG 2 cut(s) 2314, 2372
NlaIV GGNNCC 1 cut(s) 1831
NmuCI GTSAC 3 cut(s) 1997, 2143, 2438
NsbI TGCGCA 1 cut(s) 654
NsiI ATGCAT 1 cut(s) 1814
NspI RCATGY 3 cut(s) 536, 1430, 1492
PaeI GCATGC 2 cut(s) 536, 1430
PagI TCATGA 2 cut(s) 1875, 2415
PaqCI CACCTGC 1 cut(s) 226
PceI AGGCCT 1 cut(s) 133
PciI ACATGT 1 cut(s) 1488
PctI GAATGC 3 cut(s) 679, 835, 1285
PfeI GAWTC 5 cut(s) 263, 311, 379, 746, 1166
PflMI CCANNNNNTGG 3 cut(s) 1021, 1735, 2175
PkrI GCNGC 3 cut(s) 1099, 1722, 1725
PleI GAGTC 4 cut(s) 22, 27, 58, 2030
PpsI GAGTC 4 cut(s) 22, 27, 58, 2030
PscI ACATGT 1 cut(s) 1488
PshAI GACNNNNGTC 1 cut(s) 1308
Psp6I CCWGG 6 cut(s) 128, 876, 971, 1014, 1850, 2001
PspFI CCCAGC 2 cut(s) 1748, 2111
PspGI CCWGG 6 cut(s) 128, 876, 971, 1014, 1850, 2001
PspN4I GGNNCC 1 cut(s) 1831
PstNI CAGNNNCTG 1 cut(s) 2234
PsuI RGATCY 4 cut(s) 508, 955, 1382, 1552
RsaI GTAC 4 cut(s) 187, 451, 1590, 1831
RsaNI GTAC 4 cut(s) 186, 450, 1589, 1830
RseI CAYNNNNRTG 3 cut(s) 1125, 1458, 1487
SaqAI TTAA 9 cut(s) 288, 420, 761, 789, 951, 1379, 1743, 1788, 2463
SatI GCNGC 3 cut(s) 1098, 1721, 1724
SchI GAGTC 4 cut(s) 23, 28, 58, 2030
ScrFI CCNGG 6 cut(s) 130, 878, 973, 1016, 1852, 2003
SduI GDGCHC 3 cut(s) 1237, 1300, 1783
SmiMI CAYNNNNRTG 3 cut(s) 1125, 1458, 1487
SmlI CTYRAG 1 cut(s) 66
SmoI CTYRAG 1 cut(s) 66
SphI GCATGC 2 cut(s) 536, 1430
SseBI AGGCCT 1 cut(s) 133
SsiI CCGC 4 cut(s) 325, 551, 1720, 2449
SspMI CTAG 2 cut(s) 1083, 1392
StuI AGGCCT 1 cut(s) 133
StyD4I CCNGG 6 cut(s) 128, 876, 971, 1014, 1850, 2001
TaaI ACNGT 6 cut(s) 168, 784, 1570, 1861, 2163, 2185
TaqI TCGA 6 cut(s) 17, 299, 913, 1733, 1931, 2013
TatI WGTACW 1 cut(s) 1588
TauI GCSGC 1 cut(s) 1723
TfiI GAWTC 5 cut(s) 263, 311, 379, 746, 1166
Tru1I TTAA 9 cut(s) 288, 420, 761, 789, 951, 1379, 1743, 1788, 2463
Tru9I TTAA 9 cut(s) 288, 420, 761, 789, 951, 1379, 1743, 1788, 2463
TscAI CASTG 5 cut(s) 34, 477, 549, 1108, 2263
TseFI GTSAC 3 cut(s) 1997, 2143, 2438
TseI GCWGC 2 cut(s) 1097, 1723
Tsp45I GTSAC 3 cut(s) 1997, 2143, 2438
TspGWI ACGGA 1 cut(s) 758
TspRI CASTG 5 cut(s) 34, 477, 549, 1108, 2263
Van91I CCANNNNNTGG 3 cut(s) 1021, 1735, 2175
VneI GTGCAC 1 cut(s) 1779
XapI RAATTY 3 cut(s) 811, 872, 2117
XceI RCATGY 3 cut(s) 536, 1430, 1492
XmiI GTMKAC 1 cut(s) 779
XspI CTAG 2 cut(s) 1083, 1392
Zsp2I ATGCAT 1 cut(s) 1814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.