Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0008485

Physical Location & Seq

Genomic Coordinates Forward (+)

7220371 .. 7225001

Gene Structure 4631 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g13120.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGCGGCCTCGAAGCTCTCTTCCTACGTAGCAATGGCCATCGCGGCGGCCGCTGTGCCGTCGCTCTCCACACGCGCCTACGCCGACAGCGGCGGCTTTCGCTTTTCTCCGTTCTCCTCTTCTTCTTCTTCGTCGGATCCGAAGGACCCGAGTCCGAGCGGCAAGTCGGAACCCGAACCCGAAGAGCCCAGAGGGTCCGGGATGGACCCAGAGGCTTTGGAAAGAGCTGCTAAAGCTCTCAGAGAAATCAATAGCTCTAAGAGTTCCAAGCAGATTTTCGACATGATGAGAACACAGGAAAAGACTCGCCAGACCGAGCTGTCTGCCGAGAAGGCCCATTATCAAGCTCAGCAATCTCATGCTGACATTGAAAGGCAGAAGAAATTGGCTGAAGAACAAAGAAATATTGTACAGCAAGACGCACAGCGGAAGGCACAAGGTATGCGCTACGAAGATGAACTGGCCAGGAAAAGAATGCAGACAGAGCATGAAACCCAGAGGCAGCATAATATTGAGTTAGTTAGGATGCAAGAGGAATCCTCTATGAGGAAAGAGCGAGCAAGACAGGCTACTGAGGAACAGATTCAAGCTCAGCATCGTCAGACTGAAAAAGAGAGAGCTGAACTAGAAAGAGAAACAATACGAGTGAAGGCCATTGCAGAGGCAGAAGGTCGGGCCCATGAAGCAAAATTGACTGAGGACCAAAACAGGAGAATGCTTATAGAGCGGATGAATGGTGAAAAGGAAAAATGGCTTGCTGCAATAAATACAGCTTTCAGTCACATTGAAGGGGGTTTTAGAACTTTACTGACTGATAGGAATAAATTGGTTATGACTGTCGGAGGTGCCACAGCATTGGCTGCAGGTGTTTATACAACTAGAGAAGGTTCTAGGGTTATATGGGGCTATGTCAACAGGATACTTGGGCAGCCATCTCTGATTCGAGAATCATCCATTGCAAAATATCCTGGTGCAGATATTATTTCTCAAGCAAAGAATAAGGTTTTAAATTACAGTACAGCAGCTTCTGGGTCACTGAAGAATGGTCTTGGAAATATTGTTCTCCATCCTTCGTTGCAGAGGAGAATAGAACAACTCGCACGAGCTACAGCAAACACTAAGGCTCATCAGGCACCCTTTCGCAACATGATGTTTTATGGCCCCCCTGGTACCGGTAAAACAATGGTTGCAAGGGAAATAGCTCGAAAGTCGGGTTTGGATTATGCTATGATGACTGGAGGAGATGTTGCACCCTTGGGTGCCCAGGCTGTTACTAAGATTCATCAGATATTTGATTGGGCAAAAAAGTCAAACAAAGGTCTACTACTCTTCATTGATGAGGCAGATGCATTCCTATGCGAGCGTAACAGCACACATATGAGTGAATCTCAGCGTAGTGCTCTAAATGCTTTGCTGTTTCGAACTGGAGACCAGTCGAGAGACATAGTTCTAGTACTTGCTACAAACAGGCCAGGTGATCTTGACAGTGCTATCACTGACCGGATAGATGAAGTGATTGAGTTCCCACTTCCTGGAGAGGAGGAGCGATTTAAATTATTGAAACTCTACTTAAACAAGTATCTTTCTGGTGAAGACAACACCTCTAAATGGGGCATTCTGAACAAGAAGCAACAACAGAAGATAACTATGCAGGATTTGTCCGATGAGGTGCTCCGAGAGGCTGCCAGGAAGACAGATGGGTTCTCTGGCCGTGAGATAGCTAAACTCATGGCTGGTGTTCAGGCAGCTGTGTACGGGCGCCCAGATTGTGTACTGGACTCCCAATTGTTTAAGGAGATTGTAGATTACAAAGTTGCGGAGCATCACCAGAGGATAAAACTAGCAGCTGAAGGTGGTGATGGGATTTTTGGCCTAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA DUF3523

Protein Analysis

627

Amino Acids

69.79

Weight (kDa)

8.99

Isoelectric Point (pI)

47.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATAD3_N	PF12037	57 - 315	9.2e-104	ATPase family AAA domain-containing protein 3, N-terminal
AAA	PF00004	383 - 510	6e-28	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18330 AT4G36580
fragaria_vesca	FvH4_1g13120 FvH4_1g13120 FvH4_1g13120
malus_domestica	MD02G1145900.v1.1 MD15G1260100.v1.1
prunus_persica	Prupe.7G156000_v2.0.a1 Prupe.7G156000_v2.0.a1
pyrus_communis	pycom02g11540 pycom02g11550 pycom15g22750
rosa_chinensis	RchiOBHm_Chr2g0101291
rosa_laevigata	RLG00000017067
rosa_multiflora	Rmu_co8334191.1_g000001 Rmu_sc0006128.1_g000022
rosa_roxburghii	Rroxscaffold_2G00141430
rosa_rugosa	Rorug02G0099300
rosa_samantha	Rh2AG145800 Rh2BG151200 Rh2CG151700 Rh2DG151300
rosa_wichuraiana	Rw2G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	854
AasI	GACNNNNNNGTC	1 cut(s)	319
Acc36I	ACCTGC	1 cut(s)	854
Acc65I	GGTACC	1 cut(s)	1169
AccB1I	GGYRCC	5 cut(s)	845, 1132, 1169, 1259, 1758
AccB7I	CCANNNNNTGG	1 cut(s)	1532
AccBSI	CCGCTC	2 cut(s)	159, 727
AccI	GTMKAC	1 cut(s)	1321
AccII	CGCG	2 cut(s)	44, 75
AclWI	GGATC	2 cut(s)	131, 144
AcoI	YGGCCR	4 cut(s)	36, 48, 462, 1708
AcuI	CTGAAG	3 cut(s)	411, 1058, 1869
AcyI	GRCGYC	1 cut(s)	1759
AfaI	GTAC	6 cut(s)	411, 1018, 1171, 1455, 1754, 1773
AfiI	CCNNNNNNNGG	4 cut(s)	546, 1172, 1532, 1608
AgeI	ACCGGT	1 cut(s)	1172
AgsI	TTSAA	4 cut(s)	371, 587, 788, 1561
AjnI	CCWGG	7 cut(s)	464, 967, 1165, 1263, 1471, 1531, 1685
AjuI	GAANNNNNNNTTGG	2 cut(s)	260, 292
AloI	GAACNNNNNNTCC	2 cut(s)	1044, 1076
Alw21I	GWGCWC	2 cut(s)	1402, 1674
Alw26I	GTCTC	2 cut(s)	1422, 1434
AlwI	GGATC	2 cut(s)	131, 144
AlwNI	CAGNNNCTG	1 cut(s)	1028
Ama87I	CYCGRG	1 cut(s)	148
ApaI	GGGCCC	1 cut(s)	679
ApeKI	GCWGC	9 cut(s)	227, 502, 758, 860, 928, 1022, 1682, 1745, 1844
AsiGI	ACCGGT	1 cut(s)	1172
Asp700I	GAANNNNTTC	1 cut(s)	582
Asp718I	GGTACC	1 cut(s)	1169
AspLEI	GCGC	3 cut(s)	77, 447, 1761
AspS9I	GGNCC	8 cut(s)	145, 195, 205, 334, 675, 676, 700, 1160
AsuC2I	CCSGG	1 cut(s)	199
AsuHPI	GGTGA	5 cut(s)	749, 1487, 1601, 1817, 1868
AsuII	TTCGAA	1 cut(s)	1420
AvaI	CYCGRG	1 cut(s)	148
AvaII	GGWCC	4 cut(s)	145, 195, 205, 700
BaeGI	GKGCMC	2 cut(s)	679, 1264
BalI	TGGCCA	2 cut(s)	38, 464
BamHI	GGATCC	1 cut(s)	136
BanI	GGYRCC	5 cut(s)	845, 1132, 1169, 1259, 1758
BanII	GRGCYC	2 cut(s)	189, 679
BarI	GAAGNNNNNNTAC	2 cut(s)	1009, 1041
BauI	CACGAG	1 cut(s)	1101
BbsI	GAAGAC	2 cut(s)	1599, 1697
Bbv12I	GWGCWC	2 cut(s)	1402, 1674
BbvI	GCAGC	9 cut(s)	214, 514, 745, 847, 940, 1034, 1669, 1757, 1856
BccI	CCATC	6 cut(s)	47, 196, 940, 1074, 1691, 1853
BceAI	ACGGC	2 cut(s)	43, 1695
BcgI	CGANNNNNNTGC	2 cut(s)	305, 339
BciT130I	CCWGG	7 cut(s)	466, 969, 1167, 1265, 1473, 1533, 1687
BciVI	GTATCC	1 cut(s)	912
BcnI	CCSGG	1 cut(s)	199
BcoDI	GTCTC	2 cut(s)	1422, 1434
BfaI	CTAG	6 cut(s)	626, 879, 891, 1451, 1841, 1874
BfmI	CTRYAG	2 cut(s)	861, 1107
BfoI	RGCGCY	1 cut(s)	1762
BfuAI	ACCTGC	1 cut(s)	854
BfuI	GTATCC	1 cut(s)	912
BglI	GCCNNNNNGGC	2 cut(s)	44, 332
BlpI	GCTNAGC	2 cut(s)	348, 591
BmcAI	AGTACT	1 cut(s)	1455
Bme1390I	CCNGG	8 cut(s)	199, 466, 969, 1167, 1265, 1473, 1533, 1687
Bme18I	GGWCC	4 cut(s)	145, 195, 205, 700
BmeT110I	CYCGRG	1 cut(s)	148
BmgT120I	GGNCC	8 cut(s)	145, 195, 205, 334, 675, 676, 700, 1160
BmrFI	CCNGG	8 cut(s)	199, 466, 969, 1167, 1265, 1473, 1533, 1687
BmsI	GCATC	4 cut(s)	516, 604, 1336, 1831
BoxI	GACNNNNGTC	1 cut(s)	150
BpiI	GAAGAC	2 cut(s)	1599, 1697
BplI	GAGNNNNNCTC	4 cut(s)	524, 556, 1372, 1404
BpmI	CTGGAG	3 cut(s)	1257, 1446, 1554
Bpu1102I	GCTNAGC	2 cut(s)	348, 591
Bpu14I	TTCGAA	1 cut(s)	1420
BpuEI	CTTGAG	1 cut(s)	972
BpuMI	CCSGG	1 cut(s)	199
BsaAI	YACGTR	1 cut(s)	28
BsaHI	GRCGYC	1 cut(s)	1759
BsaI	GGTCTC	1 cut(s)	1422
BsaJI	CCNNGG	3 cut(s)	1165, 1254, 1263
BsaWI	WCCGGW	2 cut(s)	1172, 1500
BsaXI	ACNNNNNCTCC	2 cut(s)	1230, 1260
Bsc4I	CCNNNNNNNGG	4 cut(s)	546, 1172, 1532, 1608
Bse118I	RCCGGY	1 cut(s)	1172
Bse1I	ACTGG	5 cut(s)	465, 1240, 1429, 1432, 1779
Bse3DI	GCAATG	3 cut(s)	39, 654, 954
BseBI	CCWGG	7 cut(s)	466, 969, 1167, 1265, 1473, 1533, 1687
BseDI	CCNNGG	3 cut(s)	1165, 1254, 1263
BseGI	GGATG	5 cut(s)	207, 531, 735, 950, 1066
BseLI	CCNNNNNNNGG	4 cut(s)	546, 1172, 1532, 1608
BseMI	GCAATG	3 cut(s)	39, 654, 954
BseMII	CTCAG	6 cut(s)	253, 362, 564, 605, 687, 1403
BseNI	ACTGG	5 cut(s)	465, 1240, 1429, 1432, 1779
BseRI	GAGGAG	5 cut(s)	106, 1096, 1254, 1553, 1556
BseSI	GKGCMC	2 cut(s)	679, 1264
BseX3I	CGGCCG	1 cut(s)	48
BseXI	GCAGC	9 cut(s)	214, 514, 745, 847, 940, 1034, 1669, 1757, 1856
BsgI	GTGCAG	1 cut(s)	993
Bsh1236I	CGCG	2 cut(s)	44, 75
Bsh1285I	CGRYCG	1 cut(s)	51
BshNI	GGYRCC	5 cut(s)	845, 1132, 1169, 1259, 1758
BshTI	ACCGGT	1 cut(s)	1172
BsiEI	CGRYCG	1 cut(s)	51
BsiHKAI	GWGCWC	2 cut(s)	1402, 1674
BsiHKCI	CYCGRG	1 cut(s)	148
BsiSI	CCGG	3 cut(s)	198, 1173, 1501
BslI	CCNNNNNNNGG	4 cut(s)	546, 1172, 1532, 1608
BsmAI	GTCTC	2 cut(s)	1422, 1434
BsmI	GAATGC	4 cut(s)	480, 720, 1349, 1614
Bso31I	GGTCTC	1 cut(s)	1422
BsoBI	CYCGRG	1 cut(s)	148
Bsp119I	TTCGAA	1 cut(s)	1420
Bsp120I	GGGCCC	1 cut(s)	675
Bsp1286I	GDGCHC	5 cut(s)	189, 679, 1264, 1402, 1674
Bsp1407I	TGTACA	1 cut(s)	409
Bsp143I	GATC	2 cut(s)	136, 1477
Bsp1720I	GCTNAGC	2 cut(s)	348, 591
BspCNI	CTCAG	6 cut(s)	252, 361, 565, 604, 688, 1402
BspFNI	CGCG	2 cut(s)	44, 75
BspMAI	CTGCAG	1 cut(s)	865
BspMI	ACCTGC	1 cut(s)	854
BspPI	GGATC	2 cut(s)	131, 144
BspQI	GCTCTTC	1 cut(s)	177
BspT104I	TTCGAA	1 cut(s)	1420
BspT107I	GGYRCC	5 cut(s)	845, 1132, 1169, 1259, 1758
BspTNI	GGTCTC	1 cut(s)	1422
BsrBI	CCGCTC	2 cut(s)	159, 727
BsrDI	GCAATG	3 cut(s)	39, 654, 954
BsrFI	RCCGGY	1 cut(s)	1172
BsrGI	TGTACA	1 cut(s)	409
BsrI	ACTGG	5 cut(s)	465, 1240, 1429, 1432, 1779
BssAI	RCCGGY	1 cut(s)	1172
BssECI	CCNNGG	3 cut(s)	1165, 1254, 1263
BssMI	GATC	2 cut(s)	136, 1477
BssNI	GRCGYC	1 cut(s)	1759
BssSI	CACGAG	1 cut(s)	1101
BssT1I	CCWWGG	1 cut(s)	1254
Bst2BI	CACGAG	1 cut(s)	1101
Bst2UI	CCWGG	7 cut(s)	466, 969, 1167, 1265, 1473, 1533, 1687
Bst4CI	ACNGT	3 cut(s)	838, 1016, 1487
Bst6I	CTCTTC	4 cut(s)	25, 124, 177, 1334
BstACI	GRCGYC	1 cut(s)	1759
BstAPI	GCANNNNNTGC	1 cut(s)	860
BstAUI	TGTACA	1 cut(s)	409
BstBAI	YACGTR	1 cut(s)	28
BstBI	TTCGAA	1 cut(s)	1420
BstC8I	GCNNGC	3 cut(s)	558, 756, 1361
BstDEI	CTNAG	9 cut(s)	239, 258, 348, 573, 591, 696, 1119, 1275, 1389
BstENI	CCTNNNNNAGG	1 cut(s)	544
BstF5I	GGATG	5 cut(s)	207, 531, 735, 950, 1066
BstFNI	CGCG	2 cut(s)	44, 75
BstH2I	RGCGCY	1 cut(s)	1762
BstHHI	GCGC	3 cut(s)	77, 447, 1761
BstKTI	GATC	2 cut(s)	139, 1480
BstMAI	GTCTC	2 cut(s)	1422, 1434
BstMBI	GATC	2 cut(s)	136, 1477
BstMCI	CGRYCG	1 cut(s)	51
BstNI	CCWGG	7 cut(s)	466, 969, 1167, 1265, 1473, 1533, 1687
BstPAI	GACNNNNGTC	1 cut(s)	150
BstSCI	CCNGG	8 cut(s)	197, 464, 967, 1165, 1263, 1471, 1531, 1685
BstSFI	CTRYAG	2 cut(s)	861, 1107
BstSLI	GKGCMC	2 cut(s)	679, 1264
BstSNI	TACGTA	1 cut(s)	28
BstUI	CGCG	2 cut(s)	44, 75
BstV1I	GCAGC	9 cut(s)	214, 514, 745, 847, 940, 1034, 1669, 1757, 1856
BstV2I	GAAGAC	2 cut(s)	1599, 1697
BstX2I	RGATCY	1 cut(s)	136
BstXI	CCANNNNNNTGG	1 cut(s)	856
BstYI	RGATCY	1 cut(s)	136
BstZI	CGGCCG	1 cut(s)	48
BsuI	GTATCC	1 cut(s)	912
BtgZI	GCGATG	1 cut(s)	25
BtsCI	GGATG	5 cut(s)	207, 531, 735, 950, 1066
BtsIMutI	CAGTG	3 cut(s)	1034, 1492, 1494
BveI	ACCTGC	1 cut(s)	854
Cac8I	GCNNGC	3 cut(s)	558, 756, 1361
CaiI	CAGNNNCTG	1 cut(s)	1028
CciNI	GCGGCCGC	1 cut(s)	48
CfoI	GCGC	3 cut(s)	77, 447, 1761
Cfr10I	RCCGGY	1 cut(s)	1172
Cfr13I	GGNCC	8 cut(s)	145, 195, 205, 334, 675, 676, 700, 1160
CseI	GACGC	1 cut(s)	428
Csp6I	GTAC	6 cut(s)	410, 1017, 1170, 1454, 1753, 1772
CspAI	ACCGGT	1 cut(s)	1172
CviAII	CATG	6 cut(s)	283, 359, 488, 680, 1147, 1729
CviQI	GTAC	6 cut(s)	410, 1017, 1170, 1454, 1753, 1772
DdeI	CTNAG	9 cut(s)	239, 258, 348, 573, 591, 696, 1119, 1275, 1389
DinI	GGCGCC	1 cut(s)	1760
DpnI	GATC	2 cut(s)	138, 1479
DpnII	GATC	2 cut(s)	136, 1477
DraI	TTTAAA	2 cut(s)	1008, 1552
DrdI	GACNNNNNNGTC	1 cut(s)	319
DseDI	GACNNNNNNGTC	1 cut(s)	319
EaeI	YGGCCR	4 cut(s)	36, 48, 462, 1708
EagI	CGGCCG	1 cut(s)	48
Eam1104I	CTCTTC	4 cut(s)	25, 124, 177, 1334
EarI	CTCTTC	4 cut(s)	25, 124, 177, 1334
EclXI	CGGCCG	1 cut(s)	48
Eco105I	TACGTA	1 cut(s)	28
Eco130I	CCWWGG	1 cut(s)	1254
Eco24I	GRGCYC	2 cut(s)	189, 679
Eco31I	GGTCTC	1 cut(s)	1422
Eco47I	GGWCC	4 cut(s)	145, 195, 205, 700
Eco52I	CGGCCG	1 cut(s)	48
Eco57I	CTGAAG	3 cut(s)	411, 1058, 1869
Eco88I	CYCGRG	1 cut(s)	148
EcoNI	CCTNNNNNAGG	1 cut(s)	544
EcoO109I	RGGNCCY	1 cut(s)	145
EcoRII	CCWGG	7 cut(s)	464, 967, 1165, 1263, 1471, 1531, 1685
EcoT14I	CCWWGG	1 cut(s)	1254
EcoT22I	ATGCAT	1 cut(s)	1351
EcoT38I	GRGCYC	2 cut(s)	189, 679
EgeI	GGCGCC	1 cut(s)	1760
EheI	GGCGCC	1 cut(s)	1760
ErhI	CCWWGG	1 cut(s)	1254
FaeI	CATG	6 cut(s)	286, 362, 491, 683, 1150, 1732
FatI	CATG	6 cut(s)	282, 358, 487, 679, 1146, 1728
FauNDI	CATATG	1 cut(s)	1377
FblI	GTMKAC	1 cut(s)	1321
FokI	GGATG	5 cut(s)	214, 538, 742, 937, 1053
FriOI	GRGCYC	2 cut(s)	189, 679
FspBI	CTAG	6 cut(s)	626, 879, 891, 1451, 1841, 1874
GlaI	GCGC	3 cut(s)	76, 446, 1760
GsuI	CTGGAG	3 cut(s)	1257, 1446, 1554
HaeII	RGCGCY	1 cut(s)	1762
HapII	CCGG	3 cut(s)	198, 1173, 1501
HgaI	GACGC	1 cut(s)	428
HhaI	GCGC	3 cut(s)	77, 447, 1761
Hin1I	GRCGYC	1 cut(s)	1759
Hin1II	CATG	6 cut(s)	286, 362, 491, 683, 1150, 1732
Hin6I	GCGC	3 cut(s)	75, 445, 1759
HinP1I	GCGC	3 cut(s)	75, 445, 1759
HincII	GTYRAC	1 cut(s)	913
HindII	GTYRAC	1 cut(s)	913
HinfI	GANTC	9 cut(s)	151, 304, 536, 583, 940, 947, 1279, 1385, 1778
HpaII	CCGG	3 cut(s)	198, 1173, 1501
HphI	GGTGA	5 cut(s)	749, 1487, 1601, 1817, 1868
Hpy166II	GTNNAC	4 cut(s)	913, 1322, 1753, 1772
Hpy188III	TCNNGA	3 cut(s)	944, 1437, 1481
Hpy8I	GTNNAC	4 cut(s)	913, 1322, 1753, 1772
Hpy99I	CGWCG	2 cut(s)	64, 136
HpyAV	CCTTC	9 cut(s)	136, 325, 424, 643, 662, 782, 878, 1080, 1844
HpyCH4III	ACNGT	3 cut(s)	838, 1016, 1487
HpyCH4IV	ACGT	1 cut(s)	27
HpyF3I	CTNAG	9 cut(s)	239, 258, 348, 573, 591, 696, 1119, 1275, 1389
HpySE526I	ACGT	1 cut(s)	27
Hsp92I	GRCGYC	1 cut(s)	1759
Hsp92II	CATG	6 cut(s)	286, 362, 491, 683, 1150, 1732
HspAI	GCGC	3 cut(s)	75, 445, 1759
KasI	GGCGCC	1 cut(s)	1758
KpnI	GGTACC	1 cut(s)	1173
Kzo9I	GATC	2 cut(s)	136, 1477
LguI	GCTCTTC	1 cut(s)	177
LmnI	GCTCC	3 cut(s)	1543, 1677, 1819
Lsp1109I	GCAGC	9 cut(s)	214, 514, 745, 847, 940, 1034, 1669, 1757, 1856
LweI	GCATC	4 cut(s)	516, 604, 1336, 1831
MaeI	CTAG	6 cut(s)	626, 879, 891, 1451, 1841, 1874
MaeII	ACGT	1 cut(s)	27
MaeIII	GTNAC	4 cut(s)	779, 1032, 1270, 1364
MalI	GATC	2 cut(s)	138, 1479
MbiI	CCGCTC	2 cut(s)	159, 727
MboI	GATC	2 cut(s)	136, 1477
MfeI	CAATTG	1 cut(s)	1784
MflI	RGATCY	1 cut(s)	136
MhlI	GDGCHC	5 cut(s)	189, 679, 1264, 1402, 1674
MlsI	TGGCCA	2 cut(s)	38, 464
MluCI	AATT	6 cut(s)	383, 689, 824, 1009, 1553, 1784
MluNI	TGGCCA	2 cut(s)	38, 464
Mly113I	GGCGCC	1 cut(s)	1759
MlyI	GAGTC	3 cut(s)	160, 298, 1772
MmeI	TCCRAC	3 cut(s)	114, 147, 820
Mox20I	TGGCCA	2 cut(s)	38, 464
Mph1103I	ATGCAT	1 cut(s)	1351
MroXI	GAANNNNTTC	1 cut(s)	582
MscI	TGGCCA	2 cut(s)	38, 464
MseI	TTAA	4 cut(s)	1007, 1551, 1571, 1791
MslI	CAYNNNNRTG	3 cut(s)	1354, 1376, 1380
Msp20I	TGGCCA	2 cut(s)	38, 464
MspA1I	CMGCKG	5 cut(s)	53, 90, 427, 1748, 1847
MspI	CCGG	3 cut(s)	198, 1173, 1501
MspR9I	CCNGG	8 cut(s)	199, 466, 969, 1167, 1265, 1473, 1533, 1687
MunI	CAATTG	1 cut(s)	1784
Mva1269I	GAATGC	4 cut(s)	480, 720, 1349, 1614
MvaI	CCWGG	7 cut(s)	466, 969, 1167, 1265, 1473, 1533, 1687
MvnI	CGCG	2 cut(s)	44, 75
NarI	GGCGCC	1 cut(s)	1759
NciI	CCSGG	1 cut(s)	199
NdeI	CATATG	1 cut(s)	1377
NdeII	GATC	2 cut(s)	136, 1477
NlaIII	CATG	6 cut(s)	286, 362, 491, 683, 1150, 1732
NmeAIII	GCCGAG	1 cut(s)	352
NmuCI	GTSAC	2 cut(s)	779, 1032
NotI	GCGGCCGC	1 cut(s)	48
NsiI	ATGCAT	1 cut(s)	1351
NspV	TTCGAA	1 cut(s)	1420
PaqCI	CACCTGC	1 cut(s)	854
PciSI	GCTCTTC	1 cut(s)	177
PcsI	WCGNNNNNNNCGW	1 cut(s)	137
PctI	GAATGC	4 cut(s)	480, 720, 1349, 1614
PdmI	GAANNNNTTC	1 cut(s)	582
PfeI	GAWTC	6 cut(s)	536, 583, 940, 947, 1279, 1385
PflMI	CCANNNNNTGG	1 cut(s)	1532
PfoI	TCCNGGA	2 cut(s)	197, 1531
PinAI	ACCGGT	1 cut(s)	1172
PleI	GAGTC	3 cut(s)	159, 298, 1772
PluTI	GGCGCC	1 cut(s)	1762
PpsI	GAGTC	3 cut(s)	159, 298, 1772
Ppu21I	YACGTR	1 cut(s)	28
PpuMI	RGGWCCY	1 cut(s)	145
PshAI	GACNNNNGTC	1 cut(s)	150
Psp5II	RGGWCCY	1 cut(s)	145
Psp6I	CCWGG	7 cut(s)	464, 967, 1165, 1263, 1471, 1531, 1685
PspGI	CCWGG	7 cut(s)	464, 967, 1165, 1263, 1471, 1531, 1685
PspOMI	GGGCCC	1 cut(s)	675
PspPI	GGNCC	8 cut(s)	145, 195, 205, 334, 675, 676, 700, 1160
PspPPI	RGGWCCY	1 cut(s)	145
PstI	CTGCAG	1 cut(s)	865
PstNI	CAGNNNCTG	1 cut(s)	1028
PsuI	RGATCY	1 cut(s)	136
PvuII	CAGCTG	2 cut(s)	1748, 1847
RsaI	GTAC	6 cut(s)	411, 1018, 1171, 1455, 1754, 1773
RsaNI	GTAC	6 cut(s)	410, 1017, 1170, 1454, 1753, 1772
RseI	CAYNNNNRTG	3 cut(s)	1354, 1376, 1380
SapI	GCTCTTC	1 cut(s)	177
SaqAI	TTAA	4 cut(s)	1007, 1551, 1571, 1791
Sau3AI	GATC	2 cut(s)	136, 1477
Sau96I	GGNCC	8 cut(s)	145, 195, 205, 334, 675, 676, 700, 1160
ScaI	AGTACT	1 cut(s)	1455
SchI	GAGTC	3 cut(s)	160, 298, 1772
ScrFI	CCNGG	8 cut(s)	199, 466, 969, 1167, 1265, 1473, 1533, 1687
SduI	GDGCHC	5 cut(s)	189, 679, 1264, 1402, 1674
SfaNI	GCATC	4 cut(s)	516, 604, 1336, 1831
SfcI	CTRYAG	2 cut(s)	861, 1107
SfoI	GGCGCC	1 cut(s)	1760
SfuI	TTCGAA	1 cut(s)	1420
SinI	GGWCC	4 cut(s)	145, 195, 205, 700
SmiI	ATTTAAAT	1 cut(s)	1552
SmiMI	CAYNNNNRTG	3 cut(s)	1354, 1376, 1380
SmlI	CTYRAG	1 cut(s)	987
SmoI	CTYRAG	1 cut(s)	987
SnaBI	TACGTA	1 cut(s)	28
Sse9I	AATT	6 cut(s)	383, 689, 824, 1009, 1553, 1784
SspDI	GGCGCC	1 cut(s)	1758
SspI	AATATT	3 cut(s)	406, 511, 1057
SspMI	CTAG	6 cut(s)	626, 879, 891, 1451, 1841, 1874
StyD4I	CCNGG	8 cut(s)	197, 464, 967, 1165, 1263, 1471, 1531, 1685
StyI	CCWWGG	1 cut(s)	1254
SwaI	ATTTAAAT	1 cut(s)	1552
TaaI	ACNGT	3 cut(s)	838, 1016, 1487
TaiI	ACGT	1 cut(s)	30
TaqI	TCGA	6 cut(s)	11, 279, 943, 1204, 1420, 1436
TaqII	GACCGA	1 cut(s)	329
TasI	AATT	6 cut(s)	383, 689, 824, 1009, 1553, 1784
TatI	WGTACW	4 cut(s)	409, 1016, 1453, 1771
TauI	GCSGC	7 cut(s)	8, 47, 50, 53, 93, 96, 162
TfiI	GAWTC	6 cut(s)	536, 583, 940, 947, 1279, 1385
Tru1I	TTAA	4 cut(s)	1007, 1551, 1571, 1791
Tru9I	TTAA	4 cut(s)	1007, 1551, 1571, 1791
TscAI	CASTG	3 cut(s)	1041, 1492, 1501
TseFI	GTSAC	2 cut(s)	779, 1032
TseI	GCWGC	9 cut(s)	227, 502, 758, 860, 928, 1022, 1682, 1745, 1844
Tsp45I	GTSAC	2 cut(s)	779, 1032
TspDTI	ATGAA	7 cut(s)	471, 504, 696, 746, 1271, 1321, 1524
TspGWI	ACGGA	1 cut(s)	99
TspRI	CASTG	3 cut(s)	1041, 1492, 1501
Van91I	CCANNNNNTGG	1 cut(s)	1532
VpaK11BI	GGWCC	4 cut(s)	145, 195, 205, 700
XagI	CCTNNNNNAGG	1 cut(s)	544
XmiI	GTMKAC	1 cut(s)	1321
XmnI	GAANNNNTTC	1 cut(s)	582
XspI	CTAG	6 cut(s)	626, 879, 891, 1451, 1841, 1874
ZrmI	AGTACT	1 cut(s)	1455
Zsp2I	ATGCAT	1 cut(s)	1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.