Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0008485

Physical Location & Seq

Genomic Coordinates Forward (+)

12049228 .. 12054510

Gene Structure 5283 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1145900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGTTGCTGCCTCGAAGCTATCTTCGTGCATAGCAATGGCGGTTGCGGCGGTCTCCATGCCCGCGCTCTCCAACCGCGCCTACGCCGATTCTCCCTTCCGATTTAATCCGTTCTCGTACTCTTCTCCTTCTCCTCCTCCGCCTTCCGCTGCTCCTGCGGACCAGAGCCCCAATGCGAAATCGGAACCGCAACCTGAAGAGCCCAGAGGGTCGGGGTTCGATCCCGAGGCTCTCGAACGAGGTGCCAAAGCTCTCCGGGAAATCAATTCCTCTAAATTATCCAAGCAGGTTTTTAGTCTGATGAGGAGCCAGGAAAAAAGTCGCCTCACTGAGTTGGAAGCGGAGAAGGCTCATTTTGAAGCAATACAGGCTCAAAATGATCTTGAAAGGAGTAAGAACATGGCTGAGGAACAACTAAATATACTGCAACAAGAAGCACAGGCAAAGGCTCAAATGCTTCGTATGGAAGATGAACACGCTAGGAATAGAATGAAGATGGATCATGAAAAGCAGAGGCAGAATAATGCTGAAATGCTTAGGATGCAAGAGGAGTCAAATATCCGAAAAGAGAGAGCAAGACTTGCTACTGAGGCACAGAAGCAAGAGCAGCAGCGCCAAACTGAAAGAGAGAAACATGAATTAGAACTAAAAAACATAGAAGCAGAAGCCATTGCAAACGCTAAAGGTCGGGCCCATGAAGCGAAACTGAATGCGGAACTTAACAGGAATATGCTTCTAGATCAGATGAATGGTGAAAAAGAAAAATGGCTTGCTGCAATCAATACAACTTTTAGTCACATTGAAGGGGGCATTAGAACTTTGCTGACTGATAGGAATAAGTTGGTTATGACCGTTGGAGGTGCTACAGCAGTGGCTGCAGGTGTTTATACAACTAGAGAAGGTTCTAGAGTTATATGGGGATATGTCAACCGCCTGCTAGGGCAGCCATCTCTGATTCGAGAATCATCCATTGCAAGATTTCCAGGTTCAGAGATGCTTTCTCTAGCAAAGAATAAAGTTTTAAATTACAGTACTGGATCTTCACAAGGTAAGAATGGTCTTGCAAATATCATTCTCCATCCTTCGTTGCAGAGCAGAATAGAGCACCTTGCTCGAGCTACAGCAAACACTAAGGCTCACCAGGCCCCCTTTCGCAACATGATGTTTTATGGCCCCCCTGGCACTGGTAAAACCATGGTTGCAAGAGAAATAGCTCGAAAATCGGGTTTGGATTATGCTATGATGACTGGAGGAGATGTTGCACCCTTGGGTGCACAGGCTGTTACTAAGATTCATCAGATATTTGATTGGGCTAAAAATTCAAAAAAAGGTCTACTGCTTTTTATTGACGAGGCAGATGCTTTCCTATGCGAGAGAAACAGTACACACATGAGCGAAGCTCAACGTAGTGCTCTGAATGCATTGCTCTTCCGAACTGGAGACCAGTCAAGAGACATCGTTCTAGTACTTGCCACAAACAGGCCAGGAGATCTTGACAGCGCTATCACTGACAGGATGGATGAAGTGATTGAGTTCCCACTTCCTGGAGAGGAGGAAAGATTCAAACTTTTGAAGCTATATTTGAACAAATATCTTGGCGATGAAGGCAAAAGCTCCAAGTCGGGCGTTTTCCTCAAGAAGAAACCTCAAAAGATTGTGATAAAGGATGTGTCTGATGATCTGATCCGAGAGGCTGCACGAAAGACAGAAGGGTTCTCTGGCCGTGAGATAGCTAAACTCATGGCCAGTGTCCAAGCAGCCGTGTATGGACGCGAAGACTGTGTACTGGATTCGCAATTGTTTGAGGAAATTGTAGAGTATAAAGTTACAGAGCACCACCAAAGAATGAAACTAGCAGCTGAAGGTGGTCATCCGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA DUF3523

Protein Analysis

627

Amino Acids

69.64

Weight (kDa)

8.75

Isoelectric Point (pI)

49.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATAD3_N	PF12037	57 - 320	7.3e-93	ATPase family AAA domain-containing protein 3, N-terminal
AAA	PF00004	387 - 514	7.6e-28	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18330 AT4G36580
fragaria_vesca	FvH4_1g13120 FvH4_1g13120 FvH4_1g13120
malus_domestica	MD02G1145900.v1.1 MD15G1260100.v1.1
prunus_persica	Prupe.7G156000_v2.0.a1 Prupe.7G156000_v2.0.a1
pyrus_communis	pycom02g11540 pycom02g11550 pycom15g22750
rosa_chinensis	RchiOBHm_Chr2g0101291
rosa_laevigata	RLG00000017067
rosa_multiflora	Rmu_co8334191.1_g000001 Rmu_sc0006128.1_g000022
rosa_roxburghii	Rroxscaffold_2G00141430
rosa_rugosa	Rorug02G0099300
rosa_samantha	Rh2AG145800 Rh2BG151200 Rh2CG151700 Rh2DG151300
rosa_wichuraiana	Rw2G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	869
Acc36I	ACCTGC	2 cut(s)	277, 869
AccB1I	GGYRCC	1 cut(s)	242
AccB7I	CCANNNNNTGG	1 cut(s)	1544
AccI	GTMKAC	1 cut(s)	1333
AccII	CGCG	3 cut(s)	65, 78, 1773
AclWI	GGATC	4 cut(s)	215, 507, 1045, 1678
AcoI	YGGCCR	2 cut(s)	1720, 1743
AcsI	RAATTY	1 cut(s)	1318
AcuI	CTGAAG	2 cut(s)	216, 1881
AfaI	GTAC	5 cut(s)	119, 1033, 1384, 1467, 1785
AfeI	AGCGCT	1 cut(s)	1501
AfiI	CCNNNNNNNGG	3 cut(s)	1184, 1479, 1544
AgsI	TTSAA	7 cut(s)	359, 386, 803, 1323, 1564, 1573, 1585
AjnI	CCWGG	6 cut(s)	309, 982, 1140, 1177, 1483, 1543
AluBI	AGCT	9 cut(s)	19, 251, 1118, 1214, 1400, 1576, 1614, 1733, 1859
AluI	AGCT	9 cut(s)	19, 251, 1118, 1214, 1400, 1576, 1614, 1733, 1859
Alw21I	GWGCWC	4 cut(s)	1107, 1276, 1414, 1836
Alw26I	GTCTC	3 cut(s)	58, 1434, 1446
Alw44I	GTGCAC	1 cut(s)	1272
AlwI	GGATC	4 cut(s)	215, 507, 1045, 1678
AlwNI	CAGNNNCTG	1 cut(s)	875
Ama87I	CYCGRG	2 cut(s)	224, 1113
Aor51HI	AGCGCT	1 cut(s)	1501
AoxI	GGCC	6 cut(s)	690, 1143, 1171, 1481, 1720, 1743
ApaI	GGGCCC	1 cut(s)	694
ApaLI	GTGCAC	1 cut(s)	1272
ApoI	RAATTY	1 cut(s)	1318
AspLEI	GCGC	4 cut(s)	67, 80, 615, 1502
AspS9I	GGNCC	5 cut(s)	160, 690, 691, 1144, 1172
AsuC2I	CCSGG	1 cut(s)	257
AsuHPI	GGTGA	2 cut(s)	764, 1130
AvaI	CYCGRG	2 cut(s)	224, 1113
AvaII	GGWCC	1 cut(s)	160
BaeGI	GKGCMC	2 cut(s)	694, 1276
BalI	TGGCCA	1 cut(s)	1745
BanI	GGYRCC	1 cut(s)	242
BanII	GRGCYC	3 cut(s)	170, 204, 694
BarI	GAAGNNNNNNTAC	4 cut(s)	1024, 1056, 1767, 1799
BbsI	GAAGAC	1 cut(s)	1782
Bbv12I	GWGCWC	4 cut(s)	1107, 1276, 1414, 1836
BbvCI	CCTCAGC	1 cut(s)	405
BbvI	GCAGC	9 cut(s)	136, 619, 622, 760, 862, 955, 1681, 1769, 1868
BccI	CCATC	4 cut(s)	490, 955, 1086, 1510
BceAI	ACGGC	2 cut(s)	1707, 1745
BcgI	CGANNNNNNTGC	6 cut(s)	224, 258, 1094, 1128, 1340, 1374
BciT130I	CCWGG	6 cut(s)	311, 984, 1142, 1179, 1485, 1545
BcnI	CCSGG	1 cut(s)	257
BcoDI	GTCTC	3 cut(s)	58, 1434, 1446
BfaI	CTAG	8 cut(s)	480, 737, 894, 906, 938, 1004, 1463, 1853
BfmI	CTRYAG	3 cut(s)	864, 876, 1119
BfoI	RGCGCY	2 cut(s)	616, 1503
BfuAI	ACCTGC	2 cut(s)	277, 869
BglI	GCCNNNNNGGC	1 cut(s)	1179
BglII	AGATCT	1 cut(s)	1489
BmcAI	AGTACT	2 cut(s)	1033, 1467
Bme1390I	CCNGG	7 cut(s)	257, 311, 984, 1142, 1179, 1485, 1545
Bme18I	GGWCC	1 cut(s)	160
BmeT110I	CYCGRG	2 cut(s)	224, 1113
BmgT120I	GGNCC	5 cut(s)	160, 690, 691, 1144, 1172
BmiI	GGNNCC	6 cut(s)	186, 244, 308, 692, 1146, 1174
BmrFI	CCNGG	7 cut(s)	257, 311, 984, 1142, 1179, 1485, 1545
BmsI	GCATC	3 cut(s)	531, 984, 1348
BpiI	GAAGAC	1 cut(s)	1782
BplI	GAGNNNNNCTC	2 cut(s)	1384, 1416
BpmI	CTGGAG	3 cut(s)	1269, 1458, 1566
Bpu10I	CCTNAGC	2 cut(s)	405, 536
BpuEI	CTTGAG	1 cut(s)	1619
BpuMI	CCSGG	1 cut(s)	257
BsaI	GGTCTC	2 cut(s)	58, 1434
BsaJI	CCNNGG	4 cut(s)	225, 1177, 1194, 1266
BsaXI	ACNNNNNCTCC	2 cut(s)	1242, 1272
Bsc4I	CCNNNNNNNGG	3 cut(s)	1184, 1479, 1544
Bse1I	ACTGG	7 cut(s)	1039, 1189, 1252, 1441, 1444, 1746, 1791
Bse3DI	GCAATG	4 cut(s)	42, 669, 969, 1421
BseBI	CCWGG	6 cut(s)	311, 984, 1142, 1179, 1485, 1545
BseDI	CCNNGG	4 cut(s)	225, 1177, 1194, 1266
BseGI	GGATG	7 cut(s)	546, 965, 1078, 1521, 1525, 1672, 1870
BseLI	CCNNNNNNNGG	3 cut(s)	1184, 1479, 1544
BseMI	GCAATG	4 cut(s)	42, 669, 969, 1421
BseMII	CTCAG	3 cut(s)	321, 396, 579
BseNI	ACTGG	7 cut(s)	1039, 1189, 1252, 1441, 1444, 1746, 1791
BseRI	GAGGAG	6 cut(s)	123, 126, 319, 563, 1266, 1565
BseSI	GKGCMC	2 cut(s)	694, 1276
BseXI	GCAGC	9 cut(s)	136, 619, 622, 760, 862, 955, 1681, 1769, 1868
BsgI	GTGCAG	1 cut(s)	1680
Bsh1236I	CGCG	3 cut(s)	65, 78, 1773
BshFI	GGCC	6 cut(s)	692, 1145, 1173, 1483, 1722, 1745
BshNI	GGYRCC	1 cut(s)	242
BsiHKAI	GWGCWC	4 cut(s)	1107, 1276, 1414, 1836
BsiHKCI	CYCGRG	2 cut(s)	224, 1113
BsiSI	CCGG	2 cut(s)	256, 1874
BslI	CCNNNNNNNGG	3 cut(s)	1184, 1479, 1544
BsmAI	GTCTC	3 cut(s)	58, 1434, 1446
BsmI	GAATGC	2 cut(s)	715, 1423
BsnI	GGCC	6 cut(s)	692, 1145, 1173, 1483, 1722, 1745
Bso31I	GGTCTC	2 cut(s)	58, 1434
BsoBI	CYCGRG	2 cut(s)	224, 1113
Bsp120I	GGGCCC	1 cut(s)	690
Bsp1286I	GDGCHC	7 cut(s)	170, 204, 694, 1107, 1276, 1414, 1836
Bsp143I	GATC	8 cut(s)	220, 379, 499, 739, 1037, 1489, 1678, 1683
Bsp19I	CCATGG	1 cut(s)	1194
BspANI	GGCC	6 cut(s)	692, 1145, 1173, 1483, 1722, 1745
BspCNI	CTCAG	3 cut(s)	322, 397, 580
BspFNI	CGCG	3 cut(s)	65, 78, 1773
BspHI	TCATGA	1 cut(s)	502
BspLI	GGNNCC	6 cut(s)	186, 244, 308, 692, 1146, 1174
BspMAI	CTGCAG	1 cut(s)	880
BspMI	ACCTGC	2 cut(s)	277, 869
BspPI	GGATC	4 cut(s)	215, 507, 1045, 1678
BspQI	GCTCTTC	2 cut(s)	192, 1433
BspT107I	GGYRCC	1 cut(s)	242
BspTNI	GGTCTC	2 cut(s)	58, 1434
BsrDI	GCAATG	4 cut(s)	42, 669, 969, 1421
BsrI	ACTGG	7 cut(s)	1039, 1189, 1252, 1441, 1444, 1746, 1791
BssECI	CCNNGG	4 cut(s)	225, 1177, 1194, 1266
BssMI	GATC	8 cut(s)	220, 379, 499, 739, 1037, 1489, 1678, 1683
BssT1I	CCWWGG	2 cut(s)	1194, 1266
Bst2UI	CCWGG	6 cut(s)	311, 984, 1142, 1179, 1485, 1545
Bst4CI	ACNGT	4 cut(s)	853, 1031, 1382, 1781
Bst6I	CTCTTC	3 cut(s)	127, 192, 1433
BstAPI	GCANNNNNTGC	2 cut(s)	581, 875
BstC8I	GCNNGC	3 cut(s)	63, 771, 935
BstDEI	CTNAG	7 cut(s)	330, 405, 536, 588, 1131, 1287, 1878
BstDSI	CCRYGG	1 cut(s)	1194
BstF5I	GGATG	7 cut(s)	546, 965, 1078, 1521, 1525, 1672, 1870
BstFNI	CGCG	3 cut(s)	65, 78, 1773
BstH2I	RGCGCY	2 cut(s)	616, 1503
BstHHI	GCGC	4 cut(s)	67, 80, 615, 1502
BstKTI	GATC	8 cut(s)	223, 382, 502, 742, 1040, 1492, 1681, 1686
BstMAI	GTCTC	3 cut(s)	58, 1434, 1446
BstMBI	GATC	8 cut(s)	220, 379, 499, 739, 1037, 1489, 1678, 1683
BstNI	CCWGG	6 cut(s)	311, 984, 1142, 1179, 1485, 1545
BstSCI	CCNGG	7 cut(s)	255, 309, 982, 1140, 1177, 1483, 1543
BstSFI	CTRYAG	3 cut(s)	864, 876, 1119
BstSLI	GKGCMC	2 cut(s)	694, 1276
BstUI	CGCG	3 cut(s)	65, 78, 1773
BstV1I	GCAGC	9 cut(s)	136, 619, 622, 760, 862, 955, 1681, 1769, 1868
BstV2I	GAAGAC	1 cut(s)	1782
BstX2I	RGATCY	2 cut(s)	1037, 1489
BstYI	RGATCY	2 cut(s)	1037, 1489
BsuRI	GGCC	6 cut(s)	692, 1145, 1173, 1483, 1722, 1745
BtgI	CCRYGG	1 cut(s)	1194
BtgZI	GCGATG	1 cut(s)	1614
BtsCI	GGATG	7 cut(s)	546, 965, 1078, 1521, 1525, 1672, 1870
BtsI	GCAGTG	1 cut(s)	876
BtsIMutI	CAGTG	5 cut(s)	327, 876, 1182, 1506, 1753
BveI	ACCTGC	2 cut(s)	277, 869
Cac8I	GCNNGC	3 cut(s)	63, 771, 935
CaiI	CAGNNNCTG	1 cut(s)	875
CciI	TCATGA	1 cut(s)	502
CfoI	GCGC	4 cut(s)	67, 80, 615, 1502
Cfr13I	GGNCC	5 cut(s)	160, 690, 691, 1144, 1172
CseI	GACGC	1 cut(s)	1779
Csp6I	GTAC	5 cut(s)	118, 1032, 1383, 1466, 1784
CviAII	CATG	9 cut(s)	58, 400, 503, 635, 695, 1159, 1195, 1390, 1741
CviQI	GTAC	5 cut(s)	118, 1032, 1383, 1466, 1784
DdeI	CTNAG	7 cut(s)	330, 405, 536, 588, 1131, 1287, 1878
DpnI	GATC	8 cut(s)	222, 381, 501, 741, 1039, 1491, 1680, 1685
DpnII	GATC	8 cut(s)	220, 379, 499, 739, 1037, 1489, 1678, 1683
DraI	TTTAAA	1 cut(s)	1023
EaeI	YGGCCR	2 cut(s)	1720, 1743
Eam1104I	CTCTTC	3 cut(s)	127, 192, 1433
EarI	CTCTTC	3 cut(s)	127, 192, 1433
EciI	GGCGGA	1 cut(s)	129
Eco130I	CCWWGG	2 cut(s)	1194, 1266
Eco24I	GRGCYC	3 cut(s)	170, 204, 694
Eco31I	GGTCTC	2 cut(s)	58, 1434
Eco47I	GGWCC	1 cut(s)	160
Eco47III	AGCGCT	1 cut(s)	1501
Eco57I	CTGAAG	2 cut(s)	216, 1881
Eco88I	CYCGRG	2 cut(s)	224, 1113
EcoO109I	RGGNCCY	1 cut(s)	1144
EcoRII	CCWGG	6 cut(s)	309, 982, 1140, 1177, 1483, 1543
EcoT14I	CCWWGG	2 cut(s)	1194, 1266
EcoT22I	ATGCAT	1 cut(s)	1423
EcoT38I	GRGCYC	3 cut(s)	170, 204, 694
ErhI	CCWWGG	2 cut(s)	1194, 1266
FaeI	CATG	9 cut(s)	61, 403, 506, 638, 698, 1162, 1198, 1393, 1744
FatI	CATG	9 cut(s)	57, 399, 502, 634, 694, 1158, 1194, 1389, 1740
FauI	CCCGC	1 cut(s)	70
FblI	GTMKAC	1 cut(s)	1333
FokI	GGATG	7 cut(s)	553, 952, 1065, 1528, 1532, 1679, 1857
FriOI	GRGCYC	3 cut(s)	170, 204, 694
FspBI	CTAG	8 cut(s)	480, 737, 894, 906, 938, 1004, 1463, 1853
GlaI	GCGC	4 cut(s)	66, 79, 614, 1501
GsuI	CTGGAG	3 cut(s)	1269, 1458, 1566
HaeII	RGCGCY	2 cut(s)	616, 1503
HaeIII	GGCC	6 cut(s)	692, 1145, 1173, 1483, 1722, 1745
HapII	CCGG	2 cut(s)	256, 1874
HgaI	GACGC	1 cut(s)	1779
HhaI	GCGC	4 cut(s)	67, 80, 615, 1502
Hin1II	CATG	9 cut(s)	61, 403, 506, 638, 698, 1162, 1198, 1393, 1744
Hin6I	GCGC	4 cut(s)	65, 78, 613, 1500
HinP1I	GCGC	4 cut(s)	65, 78, 613, 1500
HincII	GTYRAC	1 cut(s)	928
HindII	GTYRAC	1 cut(s)	928
HinfI	GANTC	7 cut(s)	89, 551, 955, 962, 1291, 1560, 1790
HpaII	CCGG	2 cut(s)	256, 1874
HphI	GGTGA	2 cut(s)	764, 1130
Hpy166II	GTNNAC	5 cut(s)	928, 1274, 1334, 1385, 1784
Hpy8I	GTNNAC	5 cut(s)	928, 1274, 1334, 1385, 1784
HpyCH4III	ACNGT	4 cut(s)	853, 1031, 1382, 1781
HpyCH4IV	ACGT	1 cut(s)	1405
HpyF3I	CTNAG	7 cut(s)	330, 405, 536, 588, 1131, 1287, 1878
HpySE526I	ACGT	1 cut(s)	1405
Hsp92II	CATG	9 cut(s)	61, 403, 506, 638, 698, 1162, 1198, 1393, 1744
HspAI	GCGC	4 cut(s)	65, 78, 613, 1500
Kzo9I	GATC	8 cut(s)	220, 379, 499, 739, 1037, 1489, 1678, 1683
LguI	GCTCTTC	2 cut(s)	192, 1433
LmnI	GCTCC	3 cut(s)	157, 306, 1619
Lsp1109I	GCAGC	9 cut(s)	136, 619, 622, 760, 862, 955, 1681, 1769, 1868
LweI	GCATC	3 cut(s)	531, 984, 1348
MaeI	CTAG	8 cut(s)	480, 737, 894, 906, 938, 1004, 1463, 1853
MaeII	ACGT	1 cut(s)	1405
MaeIII	GTNAC	3 cut(s)	794, 1282, 1825
MalI	GATC	8 cut(s)	222, 381, 501, 741, 1039, 1491, 1680, 1685
MboI	GATC	8 cut(s)	220, 379, 499, 739, 1037, 1489, 1678, 1683
MboII	GAAGA	9 cut(s)	15, 114, 209, 479, 505, 1032, 1420, 1651, 1787
MfeI	CAATTG	1 cut(s)	1796
MflI	RGATCY	2 cut(s)	1037, 1489
MhlI	GDGCHC	7 cut(s)	170, 204, 694, 1107, 1276, 1414, 1836
MlsI	TGGCCA	1 cut(s)	1745
MluCI	AATT	7 cut(s)	265, 275, 638, 1024, 1318, 1796, 1809
MluNI	TGGCCA	1 cut(s)	1745
MlyI	GAGTC	1 cut(s)	560
MmeI	TCCRAC	3 cut(s)	96, 315, 835
Mox20I	TGGCCA	1 cut(s)	1745
Mph1103I	ATGCAT	1 cut(s)	1423
MscI	TGGCCA	1 cut(s)	1745
MseI	TTAA	3 cut(s)	105, 720, 1022
MslI	CAYNNNNRTG	1 cut(s)	35
Msp20I	TGGCCA	1 cut(s)	1745
MspA1I	CMGCKG	2 cut(s)	149, 1859
MspI	CCGG	2 cut(s)	256, 1874
MspR9I	CCNGG	7 cut(s)	257, 311, 984, 1142, 1179, 1485, 1545
MunI	CAATTG	1 cut(s)	1796
Mva1269I	GAATGC	2 cut(s)	715, 1423
MvaI	CCWGG	6 cut(s)	311, 984, 1142, 1179, 1485, 1545
MvnI	CGCG	3 cut(s)	65, 78, 1773
NciI	CCSGG	1 cut(s)	257
NcoI	CCATGG	1 cut(s)	1194
NdeII	GATC	8 cut(s)	220, 379, 499, 739, 1037, 1489, 1678, 1683
NlaIII	CATG	9 cut(s)	61, 403, 506, 638, 698, 1162, 1198, 1393, 1744
NlaIV	GGNNCC	6 cut(s)	186, 244, 308, 692, 1146, 1174
NmuCI	GTSAC	1 cut(s)	794
NsiI	ATGCAT	1 cut(s)	1423
PaeR7I	CTCGAG	1 cut(s)	1113
PagI	TCATGA	1 cut(s)	502
PaqCI	CACCTGC	1 cut(s)	869
PciSI	GCTCTTC	2 cut(s)	192, 1433
PctI	GAATGC	2 cut(s)	715, 1423
PfeI	GAWTC	6 cut(s)	89, 955, 962, 1291, 1560, 1790
PflMI	CCANNNNNTGG	1 cut(s)	1544
PfoI	TCCNGGA	2 cut(s)	255, 1543
PleI	GAGTC	1 cut(s)	559
PpsI	GAGTC	1 cut(s)	559
Psp6I	CCWGG	6 cut(s)	309, 982, 1140, 1177, 1483, 1543
PspGI	CCWGG	6 cut(s)	309, 982, 1140, 1177, 1483, 1543
PspN4I	GGNNCC	6 cut(s)	186, 244, 308, 692, 1146, 1174
PspOMI	GGGCCC	1 cut(s)	690
PspPI	GGNCC	5 cut(s)	160, 690, 691, 1144, 1172
PspXI	VCTCGAGB	1 cut(s)	1113
PstI	CTGCAG	1 cut(s)	880
PstNI	CAGNNNCTG	1 cut(s)	875
PsuI	RGATCY	2 cut(s)	1037, 1489
PvuII	CAGCTG	1 cut(s)	1859
RsaI	GTAC	5 cut(s)	119, 1033, 1384, 1467, 1785
RsaNI	GTAC	5 cut(s)	118, 1032, 1383, 1466, 1784
RseI	CAYNNNNRTG	1 cut(s)	35
SapI	GCTCTTC	2 cut(s)	192, 1433
SaqAI	TTAA	3 cut(s)	105, 720, 1022
Sau3AI	GATC	8 cut(s)	220, 379, 499, 739, 1037, 1489, 1678, 1683
Sau96I	GGNCC	5 cut(s)	160, 690, 691, 1144, 1172
ScaI	AGTACT	2 cut(s)	1033, 1467
SchI	GAGTC	1 cut(s)	560
ScrFI	CCNGG	7 cut(s)	257, 311, 984, 1142, 1179, 1485, 1545
SduI	GDGCHC	7 cut(s)	170, 204, 694, 1107, 1276, 1414, 1836
SfaNI	GCATC	3 cut(s)	531, 984, 1348
SfcI	CTRYAG	3 cut(s)	864, 876, 1119
Sfr274I	CTCGAG	1 cut(s)	1113
SinI	GGWCC	1 cut(s)	160
SlaI	CTCGAG	1 cut(s)	1113
SmiMI	CAYNNNNRTG	1 cut(s)	35
SmlI	CTYRAG	2 cut(s)	1113, 1634
SmoI	CTYRAG	2 cut(s)	1113, 1634
Sse9I	AATT	7 cut(s)	265, 275, 638, 1024, 1318, 1796, 1809
SspMI	CTAG	8 cut(s)	480, 737, 894, 906, 938, 1004, 1463, 1853
StyD4I	CCNGG	7 cut(s)	255, 309, 982, 1140, 1177, 1483, 1543
StyI	CCWWGG	2 cut(s)	1194, 1266
TaaI	ACNGT	4 cut(s)	853, 1031, 1382, 1781
TaiI	ACGT	1 cut(s)	1408
TaqI	TCGA	6 cut(s)	14, 219, 234, 958, 1114, 1216
TasI	AATT	7 cut(s)	265, 275, 638, 1024, 1318, 1796, 1809
TatI	WGTACW	4 cut(s)	1031, 1382, 1465, 1783
TauI	GCSGC	1 cut(s)	50
TfiI	GAWTC	6 cut(s)	89, 955, 962, 1291, 1560, 1790
Tru1I	TTAA	3 cut(s)	105, 720, 1022
Tru9I	TTAA	3 cut(s)	105, 720, 1022
TscAI	CASTG	5 cut(s)	334, 876, 1189, 1513, 1753
TseFI	GTSAC	1 cut(s)	794
Tsp45I	GTSAC	1 cut(s)	794
TspGWI	ACGGA	1 cut(s)	99
TspRI	CASTG	5 cut(s)	334, 876, 1189, 1513, 1753
Van91I	CCANNNNNTGG	1 cut(s)	1544
VneI	GTGCAC	1 cut(s)	1272
VpaK11BI	GGWCC	1 cut(s)	160
XapI	RAATTY	1 cut(s)	1318
XbaI	TCTAGA	2 cut(s)	736, 905
XhoI	CTCGAG	1 cut(s)	1113
XmiI	GTMKAC	1 cut(s)	1333
XspI	CTAG	8 cut(s)	480, 737, 894, 906, 938, 1004, 1463, 1853
ZrmI	AGTACT	2 cut(s)	1033, 1467
Zsp2I	ATGCAT	1 cut(s)	1423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.