Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0008485

Physical Location & Seq

Genomic Coordinates Forward (+)

11464615 .. 11469382

Gene Structure 4768 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G011380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGGCGGCCTCGAAACTGTCTTCGTGCTTAGCAATGGCTATTGCGGCGGCCGCTATGCCGACGCTCTCCACACGAGCCTACGCCGACGGCGGCGGCTTTCGCTTTTCTCCGTTCTCGTCTTCTTCTTCTTCTTCATCGGCCGCGAAGGACCCAAGTTCGGGTGGGAAGCCGGAATATGAAGCCGAAGAGCCAAGAGGGTCCGGGATGGACCCAGAGGCTTTAGAAAGAGCTGCCAAGGCTCTCAGAGAAATCAATAGCTCTAAGAACTCCAAGCAGATTTTCGACATGATGAGGAAGCAGGAACAAACTCGCCAGACTGAGTTGTCTGCTGAGAAGGCTCATTTTCAAGCTCAGCAATCTCATGCTGACATTGAAAGGCAGAGGAAATTGGCTGAAGAACAAAGAAATCTTGTACAGCAAGACGCGCAGCGAAAGGCACAAGTTATGCGATACGAAGATGAACTGGCCAGGAAAAGAATGCAGACAGATCATGAAACCCAGAGGCAGCATAATATTGAGTTGGTTAGGATGCAAGAGGAGTCCTCTATGAGGAAAGAGCGAGCAAGACAGGCTACTGAGGAACAGATCCAAGCTCAGCAGCGTCAGACCGAAAAAGAGAGAGCTGAACTAGAAAGAGAAACCATAAGAGTGAAGGCCATAGCAGAGGCAGAAGGTCGGGCCCATGAAGCAAAATTGACTGAGGACCAAAACAGGAGAATGCTTATCGAACGGATGAATGGTGAAAAGGAAAAATGGCTTGCTGCAATAAATACAGCTTTCAGTCACATTGAAGGGGGTTTTAGAACTTTACTGACTGATAGGAATAAATTGGTTATGACCGTTGGAGGTGCCACAGCATTGGCTGCAGGTGTTTATACAACTAGAGAAGGTTCTAGGGTTATATGGGGTTATGTCAACCGGATACTTGGGCAGCCATCTTTGATTCGAGAATCATCCATTGCAAGATTTCCAGGTTCAGAGATAATTTCTCAAGCAAAGAATAAAGTTTTAAATTATAGTACAGCAGCTGCAGCTTCTGGTCCCCTGAAGAATGGTCTTGGAAATATTGTTCTCCATCCTTCGTTGCAGAGGAGAATAGAACAACTCGCTCGAGCTACAGCAAACACTAAGGCTCATCAGGCACCCTTTCGCAACATGATGTTTTATGGCCCCCCTGGTACTGGCAAAACCATGGTTGCAAGGGAAATAGCTCGAAAATCGGGTTTGGATTATGCTATGATGACCGGAGGAGATGTTGCACCCTTGGGTGCACAGGCTGTTACTAAAATCCATCAGATATTTGATTGGGCAAAAAAATCTAACAAAGGTCTACTACTCTTCATTGATGAGGCAGATGCATTCCTATGCGAGCGTAACAGCACACATATGAGCGAATCTCAGCGGAGTGCTCTAAATGCATTGCTGTTCCGAACTGGAGATCAATCGAGAGACATAGTTCTTGTGCTTGCTACAAACAGGCCAAGTGATCTTGACAGTGCTGTCACTGACCGCATAGATGAAGTGATTGAGTTCCCACTTCCTGGAGAGGAGGAGCGATTTAAGTTATTGAAACTCTATTTGAACAAGTATCTTTCTGGTGAAGAGAACACCTCTAAGTGGGGCTCTCTGTACAAGAAGCAGCCACAAAAGATAACAATGAAGGATCTGTCCGATGATGTGATCCGAGAGGCTGCCCGGAAGACAGAAGGGTTCTCTGGCCGCGAGATTGCTAAACTCATGGCTGGTGTTCAAGCAGCTGTGTACGGGCGCCCAGATTGTGTATTGGACTCCCAATTGTTTGAGGAGATTGTAGATTACAAAGTTGCAGAGCACCACCAGAGGATAAAACTAGCAGCTGAAGGTGGTGATGGGATTTTTGGCCTGACGAGTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA DUF3523

Protein Analysis

631

Amino Acids

70.26

Weight (kDa)

8.97

Isoelectric Point (pI)

47.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATAD3_N	PF12037	56 - 316	5.8e-104	ATPase family AAA domain-containing protein 3, N-terminal
AAA	PF00004	386 - 513	6.4e-28	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18330 AT4G36580
fragaria_vesca	FvH4_1g13120 FvH4_1g13120 FvH4_1g13120
malus_domestica	MD02G1145900.v1.1 MD15G1260100.v1.1
prunus_persica	Prupe.7G156000_v2.0.a1 Prupe.7G156000_v2.0.a1
pyrus_communis	pycom02g11540 pycom02g11550 pycom15g22750
rosa_chinensis	RchiOBHm_Chr2g0101291
rosa_laevigata	RLG00000017067
rosa_multiflora	Rmu_co8334191.1_g000001 Rmu_sc0006128.1_g000022
rosa_roxburghii	Rroxscaffold_2G00141430
rosa_rugosa	Rorug02G0099300
rosa_samantha	Rh2AG145800 Rh2BG151200 Rh2CG151700 Rh2DG151300
rosa_wichuraiana	Rw2G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	857
AasI	GACNNNNNNGTC	2 cut(s)	322, 1499
Acc36I	ACCTGC	1 cut(s)	857
AccB1I	GGYRCC	3 cut(s)	848, 1141, 1767
AccB7I	CCANNNNNTGG	1 cut(s)	1541
AccI	GTMKAC	1 cut(s)	1330
AccII	CGCG	3 cut(s)	143, 425, 1722
AclWI	GGATC	3 cut(s)	580, 1671, 1675
AcoI	YGGCCR	4 cut(s)	48, 138, 465, 1717
AcuI	CTGAAG	3 cut(s)	414, 1067, 1878
AcyI	GRCGYC	1 cut(s)	1768
AfaI	GTAC	5 cut(s)	414, 1021, 1180, 1631, 1763
AfiI	CCNNNNNNNGG	6 cut(s)	157, 158, 549, 1181, 1541, 1617
AgsI	TTSAA	6 cut(s)	347, 374, 791, 1570, 1582, 1751
AjnI	CCWGG	4 cut(s)	467, 970, 1174, 1540
AjuI	GAANNNNNNNTTGG	2 cut(s)	263, 295
AloI	GAACNNNNNNTCC	2 cut(s)	1053, 1085
Alw21I	GWGCWC	3 cut(s)	1273, 1411, 1833
Alw26I	GTCTC	1 cut(s)	1443
Alw44I	GTGCAC	1 cut(s)	1269
AlwI	GGATC	3 cut(s)	580, 1671, 1675
AlwNI	CAGNNNCTG	2 cut(s)	1028, 1037
Ama87I	CYCGRG	1 cut(s)	1110
ApaI	GGGCCC	1 cut(s)	682
ApaLI	GTGCAC	1 cut(s)	1269
AspLEI	GCGC	2 cut(s)	427, 1770
AspS9I	GGNCC	8 cut(s)	148, 198, 208, 678, 679, 703, 1040, 1169
AsuC2I	CCSGG	2 cut(s)	202, 1696
AsuHPI	GGTGA	3 cut(s)	752, 1610, 1877
AvaI	CYCGRG	1 cut(s)	1110
AvaII	GGWCC	5 cut(s)	148, 198, 208, 703, 1040
BaeGI	GKGCMC	2 cut(s)	682, 1273
BalI	TGGCCA	1 cut(s)	467
BanI	GGYRCC	3 cut(s)	848, 1141, 1767
BanII	GRGCYC	2 cut(s)	682, 1625
BauI	CACGAG	1 cut(s)	72
BbsI	GAAGAC	3 cut(s)	12, 111, 1706
Bbv12I	GWGCWC	3 cut(s)	1273, 1411, 1833
BccI	CCATC	5 cut(s)	199, 943, 1083, 1299, 1862
BceAI	ACGGC	1 cut(s)	103
BciT130I	CCWGG	4 cut(s)	469, 972, 1176, 1542
BciVI	GTATCC	1 cut(s)	915
BcnI	CCSGG	2 cut(s)	202, 1696
BcoDI	GTCTC	1 cut(s)	1443
BfaI	CTAG	4 cut(s)	629, 882, 894, 1850
BfmI	CTRYAG	3 cut(s)	864, 1029, 1116
BfoI	RGCGCY	1 cut(s)	1771
BfuAI	ACCTGC	1 cut(s)	857
BfuI	GTATCC	1 cut(s)	915
BlpI	GCTNAGC	3 cut(s)	28, 351, 594
Bme1390I	CCNGG	6 cut(s)	202, 469, 972, 1176, 1542, 1696
Bme18I	GGWCC	5 cut(s)	148, 198, 208, 703, 1040
BmeT110I	CYCGRG	1 cut(s)	1110
BmgT120I	GGNCC	8 cut(s)	148, 198, 208, 678, 679, 703, 1040, 1169
BmiI	GGNNCC	9 cut(s)	150, 199, 210, 680, 850, 1042, 1143, 1171, 1769
BmrFI	CCNGG	6 cut(s)	202, 469, 972, 1176, 1542, 1696
BmsI	GCATC	2 cut(s)	519, 1345
BpiI	GAAGAC	3 cut(s)	12, 111, 1706
BplI	GAGNNNNNCTC	6 cut(s)	527, 559, 1381, 1413, 1595, 1627
BpmI	CTGGAG	2 cut(s)	1455, 1563
Bpu1102I	GCTNAGC	3 cut(s)	28, 351, 594
BpuEI	CTTGAG	1 cut(s)	975
BpuMI	CCSGG	2 cut(s)	202, 1696
BsaHI	GRCGYC	1 cut(s)	1768
BsaJI	CCNNGG	4 cut(s)	234, 1174, 1191, 1263
BsaWI	WCCGGW	2 cut(s)	918, 1244
BsaXI	ACNNNNNCTCC	2 cut(s)	1239, 1269
Bsc4I	CCNNNNNNNGG	6 cut(s)	157, 158, 549, 1181, 1541, 1617
Bse1I	ACTGG	3 cut(s)	468, 1186, 1438
Bse3DI	GCAATG	3 cut(s)	39, 957, 1418
BseBI	CCWGG	4 cut(s)	469, 972, 1176, 1542
BseDI	CCNNGG	4 cut(s)	234, 1174, 1191, 1263
BseGI	GGATG	5 cut(s)	210, 534, 738, 953, 1075
BseLI	CCNNNNNNNGG	6 cut(s)	157, 158, 549, 1181, 1541, 1617
BseMI	GCAATG	3 cut(s)	39, 957, 1418
BseMII	CTCAG	8 cut(s)	256, 309, 321, 365, 567, 608, 690, 1412
BseNI	ACTGG	3 cut(s)	468, 1186, 1438
BseRI	GAGGAG	6 cut(s)	551, 1105, 1263, 1562, 1565, 1817
BseSI	GKGCMC	2 cut(s)	682, 1273
BseX3I	CGGCCG	2 cut(s)	48, 138
Bsh1236I	CGCG	3 cut(s)	143, 425, 1722
Bsh1285I	CGRYCG	2 cut(s)	51, 141
BshNI	GGYRCC	3 cut(s)	848, 1141, 1767
BsiEI	CGRYCG	2 cut(s)	51, 141
BsiHKAI	GWGCWC	3 cut(s)	1273, 1411, 1833
BsiHKCI	CYCGRG	1 cut(s)	1110
BsiSI	CCGG	5 cut(s)	170, 201, 919, 1245, 1696
BslFI	GGGAC	1 cut(s)	1026
BslI	CCNNNNNNNGG	6 cut(s)	157, 158, 549, 1181, 1541, 1617
BsmAI	GTCTC	1 cut(s)	1443
BsmFI	GGGAC	1 cut(s)	1026
BsmI	GAATGC	3 cut(s)	483, 723, 1358
BsoBI	CYCGRG	1 cut(s)	1110
Bsp120I	GGGCCC	1 cut(s)	678
Bsp1286I	GDGCHC	5 cut(s)	682, 1273, 1411, 1625, 1833
Bsp1407I	TGTACA	2 cut(s)	412, 1629
Bsp143I	GATC	6 cut(s)	487, 585, 1438, 1486, 1663, 1680
Bsp1720I	GCTNAGC	3 cut(s)	28, 351, 594
Bsp19I	CCATGG	1 cut(s)	1191
BspCNI	CTCAG	8 cut(s)	255, 310, 322, 364, 568, 607, 691, 1411
BspFNI	CGCG	3 cut(s)	143, 425, 1722
BspHI	TCATGA	1 cut(s)	490
BspLI	GGNNCC	9 cut(s)	150, 199, 210, 680, 850, 1042, 1143, 1171, 1769
BspMAI	CTGCAG	2 cut(s)	868, 1033
BspMI	ACCTGC	1 cut(s)	857
BspPI	GGATC	3 cut(s)	580, 1671, 1675
BspQI	GCTCTTC	1 cut(s)	180
BspT107I	GGYRCC	3 cut(s)	848, 1141, 1767
BsrDI	GCAATG	3 cut(s)	39, 957, 1418
BsrGI	TGTACA	2 cut(s)	412, 1629
BsrI	ACTGG	3 cut(s)	468, 1186, 1438
BssECI	CCNNGG	4 cut(s)	234, 1174, 1191, 1263
BssMI	GATC	6 cut(s)	487, 585, 1438, 1486, 1663, 1680
BssNI	GRCGYC	1 cut(s)	1768
BssSI	CACGAG	1 cut(s)	72
BssT1I	CCWWGG	3 cut(s)	234, 1191, 1263
Bst2BI	CACGAG	1 cut(s)	72
Bst2UI	CCWGG	4 cut(s)	469, 972, 1176, 1542
Bst4CI	ACNGT	3 cut(s)	18, 841, 1496
Bst6I	CTCTTC	3 cut(s)	180, 1343, 1596
BstACI	GRCGYC	1 cut(s)	1768
BstAPI	GCANNNNNTGC	1 cut(s)	863
BstAUI	TGTACA	2 cut(s)	412, 1629
BstC8I	GCNNGC	4 cut(s)	561, 759, 1370, 1467
BstDSI	CCRYGG	1 cut(s)	1191
BstENI	CCTNNNNNAGG	1 cut(s)	547
BstF5I	GGATG	5 cut(s)	210, 534, 738, 953, 1075
BstFNI	CGCG	3 cut(s)	143, 425, 1722
BstH2I	RGCGCY	1 cut(s)	1771
BstHHI	GCGC	2 cut(s)	427, 1770
BstKTI	GATC	6 cut(s)	490, 588, 1441, 1489, 1666, 1683
BstMAI	GTCTC	1 cut(s)	1443
BstMBI	GATC	6 cut(s)	487, 585, 1438, 1486, 1663, 1680
BstMCI	CGRYCG	2 cut(s)	51, 141
BstNI	CCWGG	4 cut(s)	469, 972, 1176, 1542
BstSCI	CCNGG	6 cut(s)	200, 467, 970, 1174, 1540, 1694
BstSFI	CTRYAG	3 cut(s)	864, 1029, 1116
BstSLI	GKGCMC	2 cut(s)	682, 1273
BstUI	CGCG	3 cut(s)	143, 425, 1722
BstV2I	GAAGAC	3 cut(s)	12, 111, 1706
BstX2I	RGATCY	2 cut(s)	585, 1663
BstXI	CCANNNNNNTGG	1 cut(s)	859
BstYI	RGATCY	2 cut(s)	585, 1663
BstZI	CGGCCG	2 cut(s)	48, 138
BsuI	GTATCC	1 cut(s)	915
BtgI	CCRYGG	1 cut(s)	1191
BtsCI	GGATG	5 cut(s)	210, 534, 738, 953, 1075
BtsIMutI	CAGTG	2 cut(s)	1501, 1503
BveI	ACCTGC	1 cut(s)	857
Cac8I	GCNNGC	4 cut(s)	561, 759, 1370, 1467
CaiI	CAGNNNCTG	2 cut(s)	1028, 1037
CciI	TCATGA	1 cut(s)	490
CciNI	GCGGCCGC	1 cut(s)	48
CfoI	GCGC	2 cut(s)	427, 1770
Cfr13I	GGNCC	8 cut(s)	148, 198, 208, 678, 679, 703, 1040, 1169
CseI	GACGC	3 cut(s)	70, 431, 590
Csp6I	GTAC	5 cut(s)	413, 1020, 1179, 1630, 1762
CviAII	CATG	7 cut(s)	286, 362, 491, 683, 1156, 1192, 1738
CviQI	GTAC	5 cut(s)	413, 1020, 1179, 1630, 1762
DinI	GGCGCC	1 cut(s)	1769
DpnI	GATC	6 cut(s)	489, 587, 1440, 1488, 1665, 1682
DpnII	GATC	6 cut(s)	487, 585, 1438, 1486, 1663, 1680
DraI	TTTAAA	1 cut(s)	1011
DrdI	GACNNNNNNGTC	2 cut(s)	322, 1499
DseDI	GACNNNNNNGTC	2 cut(s)	322, 1499
EaeI	YGGCCR	4 cut(s)	48, 138, 465, 1717
EagI	CGGCCG	2 cut(s)	48, 138
Eam1104I	CTCTTC	3 cut(s)	180, 1343, 1596
EarI	CTCTTC	3 cut(s)	180, 1343, 1596
EclXI	CGGCCG	2 cut(s)	48, 138
Eco130I	CCWWGG	3 cut(s)	234, 1191, 1263
Eco24I	GRGCYC	2 cut(s)	682, 1625
Eco47I	GGWCC	5 cut(s)	148, 198, 208, 703, 1040
Eco52I	CGGCCG	2 cut(s)	48, 138
Eco57I	CTGAAG	3 cut(s)	414, 1067, 1878
Eco88I	CYCGRG	1 cut(s)	1110
EcoNI	CCTNNNNNAGG	1 cut(s)	547
EcoO109I	RGGNCCY	1 cut(s)	148
EcoRII	CCWGG	4 cut(s)	467, 970, 1174, 1540
EcoT14I	CCWWGG	3 cut(s)	234, 1191, 1263
EcoT22I	ATGCAT	2 cut(s)	1360, 1420
EcoT38I	GRGCYC	2 cut(s)	682, 1625
EgeI	GGCGCC	1 cut(s)	1769
EheI	GGCGCC	1 cut(s)	1769
ErhI	CCWWGG	3 cut(s)	234, 1191, 1263
FaeI	CATG	7 cut(s)	289, 365, 494, 686, 1159, 1195, 1741
FaqI	GGGAC	1 cut(s)	1026
FatI	CATG	7 cut(s)	285, 361, 490, 682, 1155, 1191, 1737
FauNDI	CATATG	1 cut(s)	1386
FblI	GTMKAC	1 cut(s)	1330
FokI	GGATG	5 cut(s)	217, 541, 745, 940, 1062
FriOI	GRGCYC	2 cut(s)	682, 1625
FspBI	CTAG	4 cut(s)	629, 882, 894, 1850
GlaI	GCGC	2 cut(s)	426, 1769
GsuI	CTGGAG	2 cut(s)	1455, 1563
HaeII	RGCGCY	1 cut(s)	1771
HapII	CCGG	5 cut(s)	170, 201, 919, 1245, 1696
HgaI	GACGC	3 cut(s)	70, 431, 590
HhaI	GCGC	2 cut(s)	427, 1770
Hin1I	GRCGYC	1 cut(s)	1768
Hin1II	CATG	7 cut(s)	289, 365, 494, 686, 1159, 1195, 1741
Hin6I	GCGC	2 cut(s)	425, 1768
HinP1I	GCGC	2 cut(s)	425, 1768
HincII	GTYRAC	1 cut(s)	916
HindII	GTYRAC	1 cut(s)	916
HinfI	GANTC	5 cut(s)	539, 943, 950, 1394, 1787
HpaII	CCGG	5 cut(s)	170, 201, 919, 1245, 1696
HphI	GGTGA	3 cut(s)	752, 1610, 1877
Hpy166II	GTNNAC	4 cut(s)	916, 1271, 1331, 1762
Hpy188I	TCNGA	7 cut(s)	245, 606, 979, 1296, 1430, 1672, 1685
Hpy188III	TCNNGA	4 cut(s)	491, 947, 1446, 1490
Hpy8I	GTNNAC	4 cut(s)	916, 1271, 1331, 1762
Hpy99I	CGWCG	2 cut(s)	64, 89
HpyCH4III	ACNGT	3 cut(s)	18, 841, 1496
Hsp92I	GRCGYC	1 cut(s)	1768
Hsp92II	CATG	7 cut(s)	289, 365, 494, 686, 1159, 1195, 1741
HspAI	GCGC	2 cut(s)	425, 1768
KasI	GGCGCC	1 cut(s)	1767
Kzo9I	GATC	6 cut(s)	487, 585, 1438, 1486, 1663, 1680
LguI	GCTCTTC	1 cut(s)	180
LmnI	GCTCC	1 cut(s)	1552
LweI	GCATC	2 cut(s)	519, 1345
MaeI	CTAG	4 cut(s)	629, 882, 894, 1850
MaeIII	GTNAC	4 cut(s)	782, 1279, 1373, 1501
MalI	GATC	6 cut(s)	489, 587, 1440, 1488, 1665, 1682
MboI	GATC	6 cut(s)	487, 585, 1438, 1486, 1663, 1680
MfeI	CAATTG	1 cut(s)	1793
MflI	RGATCY	2 cut(s)	585, 1663
MhlI	GDGCHC	5 cut(s)	682, 1273, 1411, 1625, 1833
MlsI	TGGCCA	1 cut(s)	467
MluCI	AATT	6 cut(s)	386, 692, 827, 984, 1012, 1793
MluNI	TGGCCA	1 cut(s)	467
Mly113I	GGCGCC	1 cut(s)	1768
MlyI	GAGTC	2 cut(s)	548, 1781
MmeI	TCCRAC	1 cut(s)	823
Mox20I	TGGCCA	1 cut(s)	467
Mph1103I	ATGCAT	2 cut(s)	1360, 1420
MscI	TGGCCA	1 cut(s)	467
MseI	TTAA	2 cut(s)	1010, 1560
MslI	CAYNNNNRTG	3 cut(s)	647, 1363, 1385
Msp20I	TGGCCA	1 cut(s)	467
MspA1I	CMGCKG	4 cut(s)	1028, 1402, 1757, 1856
MspI	CCGG	5 cut(s)	170, 201, 919, 1245, 1696
MspR9I	CCNGG	6 cut(s)	202, 469, 972, 1176, 1542, 1696
MunI	CAATTG	1 cut(s)	1793
Mva1269I	GAATGC	3 cut(s)	483, 723, 1358
MvaI	CCWGG	4 cut(s)	469, 972, 1176, 1542
MvnI	CGCG	3 cut(s)	143, 425, 1722
NarI	GGCGCC	1 cut(s)	1768
NciI	CCSGG	2 cut(s)	202, 1696
NcoI	CCATGG	1 cut(s)	1191
NdeI	CATATG	1 cut(s)	1386
NdeII	GATC	6 cut(s)	487, 585, 1438, 1486, 1663, 1680
NlaIII	CATG	7 cut(s)	289, 365, 494, 686, 1159, 1195, 1741
NlaIV	GGNNCC	9 cut(s)	150, 199, 210, 680, 850, 1042, 1143, 1171, 1769
NmuCI	GTSAC	2 cut(s)	782, 1501
NotI	GCGGCCGC	1 cut(s)	48
NsiI	ATGCAT	2 cut(s)	1360, 1420
PaeR7I	CTCGAG	1 cut(s)	1110
PagI	TCATGA	1 cut(s)	490
PaqCI	CACCTGC	1 cut(s)	857
PciSI	GCTCTTC	1 cut(s)	180
PctI	GAATGC	3 cut(s)	483, 723, 1358
PfeI	GAWTC	3 cut(s)	943, 950, 1394
PflMI	CCANNNNNTGG	1 cut(s)	1541
PfoI	TCCNGGA	2 cut(s)	200, 1540
PleI	GAGTC	2 cut(s)	547, 1781
PluTI	GGCGCC	1 cut(s)	1771
PpsI	GAGTC	2 cut(s)	547, 1781
PpuMI	RGGWCCY	1 cut(s)	148
Psp5II	RGGWCCY	1 cut(s)	148
Psp6I	CCWGG	4 cut(s)	467, 970, 1174, 1540
PspGI	CCWGG	4 cut(s)	467, 970, 1174, 1540
PspN4I	GGNNCC	9 cut(s)	150, 199, 210, 680, 850, 1042, 1143, 1171, 1769
PspOMI	GGGCCC	1 cut(s)	678
PspPI	GGNCC	8 cut(s)	148, 198, 208, 678, 679, 703, 1040, 1169
PspPPI	RGGWCCY	1 cut(s)	148
PspXI	VCTCGAGB	1 cut(s)	1110
PstI	CTGCAG	2 cut(s)	868, 1033
PstNI	CAGNNNCTG	2 cut(s)	1028, 1037
PsuI	RGATCY	2 cut(s)	585, 1663
PvuII	CAGCTG	3 cut(s)	1028, 1757, 1856
RsaI	GTAC	5 cut(s)	414, 1021, 1180, 1631, 1763
RsaNI	GTAC	5 cut(s)	413, 1020, 1179, 1630, 1762
RseI	CAYNNNNRTG	3 cut(s)	647, 1363, 1385
SapI	GCTCTTC	1 cut(s)	180
SaqAI	TTAA	2 cut(s)	1010, 1560
Sau3AI	GATC	6 cut(s)	487, 585, 1438, 1486, 1663, 1680
Sau96I	GGNCC	8 cut(s)	148, 198, 208, 678, 679, 703, 1040, 1169
SchI	GAGTC	2 cut(s)	548, 1781
ScrFI	CCNGG	6 cut(s)	202, 469, 972, 1176, 1542, 1696
SduI	GDGCHC	5 cut(s)	682, 1273, 1411, 1625, 1833
SfaNI	GCATC	2 cut(s)	519, 1345
SfcI	CTRYAG	3 cut(s)	864, 1029, 1116
SfoI	GGCGCC	1 cut(s)	1769
Sfr274I	CTCGAG	1 cut(s)	1110
SinI	GGWCC	5 cut(s)	148, 198, 208, 703, 1040
SlaI	CTCGAG	1 cut(s)	1110
SmiMI	CAYNNNNRTG	3 cut(s)	647, 1363, 1385
SmlI	CTYRAG	2 cut(s)	990, 1110
SmoI	CTYRAG	2 cut(s)	990, 1110
Sse9I	AATT	6 cut(s)	386, 692, 827, 984, 1012, 1793
SspDI	GGCGCC	1 cut(s)	1767
SspI	AATATT	2 cut(s)	514, 1066
SspMI	CTAG	4 cut(s)	629, 882, 894, 1850
StyD4I	CCNGG	6 cut(s)	200, 467, 970, 1174, 1540, 1694
StyI	CCWWGG	3 cut(s)	234, 1191, 1263
TaaI	ACNGT	3 cut(s)	18, 841, 1496
TaqI	TCGA	7 cut(s)	11, 282, 726, 946, 1111, 1213, 1445
TaqII	GACCGA	1 cut(s)	623
TasI	AATT	6 cut(s)	386, 692, 827, 984, 1012, 1793
TatI	WGTACW	3 cut(s)	412, 1019, 1629
TauI	GCSGC	8 cut(s)	8, 47, 50, 53, 93, 96, 143, 1722
TfiI	GAWTC	3 cut(s)	943, 950, 1394
Tru1I	TTAA	2 cut(s)	1010, 1560
Tru9I	TTAA	2 cut(s)	1010, 1560
TscAI	CASTG	2 cut(s)	1501, 1510
TseFI	GTSAC	2 cut(s)	782, 1501
Tsp45I	GTSAC	2 cut(s)	782, 1501
TspDTI	ATGAA	9 cut(s)	123, 192, 474, 507, 699, 749, 1330, 1533, 1673
TspGWI	ACGGA	2 cut(s)	99, 745
TspRI	CASTG	2 cut(s)	1501, 1510
Van91I	CCANNNNNTGG	1 cut(s)	1541
VneI	GTGCAC	1 cut(s)	1269
VpaK11BI	GGWCC	5 cut(s)	148, 198, 208, 703, 1040
XagI	CCTNNNNNAGG	1 cut(s)	547
XhoI	CTCGAG	1 cut(s)	1110
XmiI	GTMKAC	1 cut(s)	1330
XspI	CTAG	4 cut(s)	629, 882, 894, 1850
Zsp2I	ATGCAT	2 cut(s)	1360, 1420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.