Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0008485

Physical Location & Seq

Genomic Coordinates Forward (+)

12530610 .. 12534993

Gene Structure 4384 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017067

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGCGGCCTCGAAACTGTCTTCGTGCTTAGCAATGGCTATTGCGGCCGCCGCTATGCCGACGCTCTCCACACTCGCCTACGCCGACGGCGGCGGCTTTCGCTTTTCTCCGTTCGCGTCTTCTTCTTCTTCGTCGGCCGCGAAGGACCCAAGTTCGAGTGGGAAGCCGGAATATGAAGCCGAAGAGCCAAGAGGGTCCGGGATGGACCCAGAGGCTTTAGAAAGAGCTGCCAAAGCTCTCAGAGAAATCAATAGCTCTAAGAACTCCAAGCAGATTTTCGACATGATGAGGAAGCAGGAACAAACTCGCCAGACTGAGTTGTCTGCCGAGAAGGCTCATTTTCAAGCTCAGCAATCTCACGCTGACATTGAAAGGCAGCGGAAATTGGCTGAAGAACAAAGAAATCTTGTACAGCAAGATGCACAGCGAAAGGCACAAGTTATGCGATACGAAGATGAACTGGCCAGGAAAAGAATGCAGACGGATCATGAAACCCAGAGGCAGCATAATATTGAGTTGGTTAGGATGCAAGAGGAGTCCTCTATGAGGAAAGAGCGAGCAAGACAGGCTACTGAGGAACAGATCCAAGCTCAGCAGCGTCAGACTGAAAAAGAGAGAGCTGAACTAGAAAGAGAAACCATAAGAGTGAAGGCCATAGCAGAGGCAGAAGGTCGGGCCCATGAAGCAAAATTGACTGAGGACCAAAACAGGAGAATGCTTATCGAACGGATGAATGGTGAAAAGGAAAAATGGCTCGCTGCAATAAATACAGCTTTCAGTCACATTGAAGGGGGTTTTAGAACTTTACTGACTGATAGGAATAAATTGGTTATGACCGTTGGAGGTGCCACAGCATTGGCTGCGGGTGTTTATACAACTAGAGAAGGTTCTAGGGTTATATGGGGTTATGTCAACCGGATACTTGGGCAGCCATCTTTGATTCGAGAATCATCCATTGCAAGATTTCCAGGTTCAGATATAATTTCTCAAGCAAAGAATAAAGTTTTAAATTATAGTACAGCAGCTGCAGCTGGTCCCCTGAAGAATGGTCTTGGAAATATTGTTCTCCATCCTTCGTTGCAGAGGAGAATAGAACAACTCGCTCGAGCTACAGCAAACACTAAGGCTCATCAGGCACCCTTTCGCAACATGATGTTTTATGGCCCCCCTGGTACTGGCAAAACCATGGTTGCAAGGGAAATAGCTCGAAAATCGGGTTTGGATTATGCTATGATGACCGGAGGAGATGTTGCACCCTTGGGTGCACAGGCTGTTACTAAAATCCATCAGATATTTGATTGGGCAAAAAAATCAAACAAAGGTCTACTACTCTTCATTGATGAGGCAGATGCATTCCTATGCGAGCGTAACAGCACACATATGAGCGAATCTCAGCGAAGCGCTCTAAATGCATTGCTGTTCCGAACTGGAGATCAGTCGAGAGACATAGTTCTTGTGCTTGCTACAAACAGGCCAGGTGATCTTGACAGTGCTATCACTGACCGCATAGATGAAGTGATTGAGTTCCCACTTCCTGGAGAAGAGGAGCGATTTAAGTTATTGAAACTCTATTTGAACAAGTATCTTTCTGGTGAAGAGAACACCTCTAAGTGGGGCTCTCTGTACAAGAAGCAGCCACAAAAGATAACAATGAAGGATCTGTCTGATGATGTGATCCGAGAGGCTGCCCGGAAAACAGAAGGGTTCTCTGGCCGCGAGATTGCTAAACTCATGGCTGGTGTTCAAGCAGCTGTGTACGGGCGCCCAGATTGTGTATTGGACTCCCAATTGTTTGAGGAGATTGTAGATTACAAAGTTGCAGAGCACCACCAGAGGATAAAACTAGCAGCTGAAGGTGGTGATGGGATTTTTGGCCTGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA DUF3523

Protein Analysis

628

Amino Acids

69.88

Weight (kDa)

8.88

Isoelectric Point (pI)

46.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATAD3_N	PF12037	52 - 315	5.7e-104	ATPase family AAA domain-containing protein 3, N-terminal
AAA	PF00004	384 - 511	6.1e-28	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18330 AT4G36580
fragaria_vesca	FvH4_1g13120 FvH4_1g13120 FvH4_1g13120
malus_domestica	MD02G1145900.v1.1 MD15G1260100.v1.1
prunus_persica	Prupe.7G156000_v2.0.a1 Prupe.7G156000_v2.0.a1
pyrus_communis	pycom02g11540 pycom02g11550 pycom15g22750
rosa_chinensis	RchiOBHm_Chr2g0101291
rosa_laevigata	RLG00000017067
rosa_multiflora	Rmu_co8334191.1_g000001 Rmu_sc0006128.1_g000022
rosa_roxburghii	Rroxscaffold_2G00141430
rosa_rugosa	Rorug02G0099300
rosa_samantha	Rh2AG145800 Rh2BG151200 Rh2CG151700 Rh2DG151300
rosa_wichuraiana	Rw2G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	319
AccB1I	GGYRCC	3 cut(s)	845, 1135, 1761
AccB7I	CCANNNNNTGG	1 cut(s)	1535
AccI	GTMKAC	1 cut(s)	1324
AccII	CGCG	3 cut(s)	116, 140, 1716
AclWI	GGATC	4 cut(s)	492, 577, 1665, 1669
AcoI	YGGCCR	4 cut(s)	45, 135, 462, 1711
AcuI	CTGAAG	3 cut(s)	411, 1061, 1872
AcyI	GRCGYC	1 cut(s)	1762
AfaI	GTAC	5 cut(s)	411, 1018, 1174, 1625, 1757
AfeI	AGCGCT	1 cut(s)	1402
AfiI	CCNNNNNNNGG	4 cut(s)	546, 1175, 1535, 1611
AgsI	TTSAA	6 cut(s)	344, 371, 788, 1564, 1576, 1745
AjnI	CCWGG	5 cut(s)	464, 967, 1168, 1474, 1534
AjuI	GAANNNNNNNTTGG	2 cut(s)	260, 292
AloI	GAACNNNNNNTCC	2 cut(s)	1047, 1079
Alw21I	GWGCWC	2 cut(s)	1267, 1827
Alw26I	GTCTC	1 cut(s)	1437
Alw44I	GTGCAC	1 cut(s)	1263
AlwI	GGATC	4 cut(s)	492, 577, 1665, 1669
AlwNI	CAGNNNCTG	1 cut(s)	1025
Ama87I	CYCGRG	1 cut(s)	1104
Aor51HI	AGCGCT	1 cut(s)	1402
ApaI	GGGCCC	1 cut(s)	679
ApaLI	GTGCAC	1 cut(s)	1263
AspLEI	GCGC	2 cut(s)	1403, 1764
AspS9I	GGNCC	8 cut(s)	145, 195, 205, 675, 676, 700, 1034, 1163
AsuC2I	CCSGG	2 cut(s)	199, 1690
AsuHPI	GGTGA	4 cut(s)	749, 1490, 1604, 1871
AvaI	CYCGRG	1 cut(s)	1104
AvaII	GGWCC	5 cut(s)	145, 195, 205, 700, 1034
BaeGI	GKGCMC	2 cut(s)	679, 1267
BalI	TGGCCA	1 cut(s)	464
BanI	GGYRCC	3 cut(s)	845, 1135, 1761
BanII	GRGCYC	2 cut(s)	679, 1619
BbsI	GAAGAC	2 cut(s)	12, 111
Bbv12I	GWGCWC	2 cut(s)	1267, 1827
BccI	CCATC	5 cut(s)	196, 940, 1077, 1293, 1856
BceAI	ACGGC	1 cut(s)	103
BciT130I	CCWGG	5 cut(s)	466, 969, 1170, 1476, 1536
BciVI	GTATCC	1 cut(s)	912
BcnI	CCSGG	2 cut(s)	199, 1690
BcoDI	GTCTC	1 cut(s)	1437
BfaI	CTAG	4 cut(s)	626, 879, 891, 1844
BfmI	CTRYAG	2 cut(s)	1026, 1110
BfoI	RGCGCY	2 cut(s)	1404, 1765
BfuI	GTATCC	1 cut(s)	912
BglI	GCCNNNNNGGC	1 cut(s)	332
BlpI	GCTNAGC	3 cut(s)	28, 348, 591
Bme1390I	CCNGG	7 cut(s)	199, 466, 969, 1170, 1476, 1536, 1690
Bme18I	GGWCC	5 cut(s)	145, 195, 205, 700, 1034
BmeT110I	CYCGRG	1 cut(s)	1104
BmgT120I	GGNCC	8 cut(s)	145, 195, 205, 675, 676, 700, 1034, 1163
BmiI	GGNNCC	9 cut(s)	147, 196, 207, 677, 847, 1036, 1137, 1165, 1763
BmrFI	CCNGG	7 cut(s)	199, 466, 969, 1170, 1476, 1536, 1690
BmsI	GCATC	3 cut(s)	409, 516, 1339
BpiI	GAAGAC	2 cut(s)	12, 111
BplI	GAGNNNNNCTC	6 cut(s)	524, 556, 1375, 1407, 1589, 1621
BpmI	CTGGAG	2 cut(s)	1449, 1557
Bpu1102I	GCTNAGC	3 cut(s)	28, 348, 591
BpuEI	CTTGAG	1 cut(s)	972
BpuMI	CCSGG	2 cut(s)	199, 1690
BsaHI	GRCGYC	1 cut(s)	1762
BsaJI	CCNNGG	3 cut(s)	1168, 1185, 1257
BsaWI	WCCGGW	2 cut(s)	915, 1238
BsaXI	ACNNNNNCTCC	2 cut(s)	1233, 1263
Bsc4I	CCNNNNNNNGG	4 cut(s)	546, 1175, 1535, 1611
Bse1I	ACTGG	3 cut(s)	465, 1180, 1432
Bse3DI	GCAATG	3 cut(s)	39, 954, 1412
BseBI	CCWGG	5 cut(s)	466, 969, 1170, 1476, 1536
BseDI	CCNNGG	3 cut(s)	1168, 1185, 1257
BseGI	GGATG	5 cut(s)	207, 531, 735, 950, 1069
BseLI	CCNNNNNNNGG	4 cut(s)	546, 1175, 1535, 1611
BseMI	GCAATG	3 cut(s)	39, 954, 1412
BseMII	CTCAG	7 cut(s)	253, 306, 362, 564, 605, 687, 1406
BseNI	ACTGG	3 cut(s)	465, 1180, 1432
BseRI	GAGGAG	5 cut(s)	548, 1099, 1257, 1559, 1811
BseSI	GKGCMC	2 cut(s)	679, 1267
BseX3I	CGGCCG	2 cut(s)	45, 135
Bsh1236I	CGCG	3 cut(s)	116, 140, 1716
Bsh1285I	CGRYCG	2 cut(s)	48, 138
BshNI	GGYRCC	3 cut(s)	845, 1135, 1761
BsiEI	CGRYCG	2 cut(s)	48, 138
BsiHKAI	GWGCWC	2 cut(s)	1267, 1827
BsiHKCI	CYCGRG	1 cut(s)	1104
BsiSI	CCGG	5 cut(s)	167, 198, 916, 1239, 1690
BslFI	GGGAC	1 cut(s)	1020
BslI	CCNNNNNNNGG	4 cut(s)	546, 1175, 1535, 1611
BsmAI	GTCTC	1 cut(s)	1437
BsmFI	GGGAC	1 cut(s)	1020
BsmI	GAATGC	3 cut(s)	480, 720, 1352
BsoBI	CYCGRG	1 cut(s)	1104
Bsp120I	GGGCCC	1 cut(s)	675
Bsp1286I	GDGCHC	4 cut(s)	679, 1267, 1619, 1827
Bsp1407I	TGTACA	2 cut(s)	409, 1623
Bsp143I	GATC	6 cut(s)	484, 582, 1432, 1480, 1657, 1674
Bsp1720I	GCTNAGC	3 cut(s)	28, 348, 591
Bsp19I	CCATGG	1 cut(s)	1185
BspCNI	CTCAG	7 cut(s)	252, 307, 361, 565, 604, 688, 1405
BspFNI	CGCG	3 cut(s)	116, 140, 1716
BspHI	TCATGA	1 cut(s)	487
BspLI	GGNNCC	9 cut(s)	147, 196, 207, 677, 847, 1036, 1137, 1165, 1763
BspMAI	CTGCAG	1 cut(s)	1030
BspPI	GGATC	4 cut(s)	492, 577, 1665, 1669
BspQI	GCTCTTC	1 cut(s)	177
BspT107I	GGYRCC	3 cut(s)	845, 1135, 1761
BsrDI	GCAATG	3 cut(s)	39, 954, 1412
BsrGI	TGTACA	2 cut(s)	409, 1623
BsrI	ACTGG	3 cut(s)	465, 1180, 1432
BssECI	CCNNGG	3 cut(s)	1168, 1185, 1257
BssMI	GATC	6 cut(s)	484, 582, 1432, 1480, 1657, 1674
BssNI	GRCGYC	1 cut(s)	1762
BssT1I	CCWWGG	2 cut(s)	1185, 1257
Bst2UI	CCWGG	5 cut(s)	466, 969, 1170, 1476, 1536
Bst4CI	ACNGT	3 cut(s)	18, 838, 1490
Bst6I	CTCTTC	4 cut(s)	177, 1337, 1536, 1590
BstACI	GRCGYC	1 cut(s)	1762
BstAPI	GCANNNNNTGC	1 cut(s)	860
BstAUI	TGTACA	2 cut(s)	409, 1623
BstC8I	GCNNGC	4 cut(s)	558, 756, 1364, 1461
BstDSI	CCRYGG	1 cut(s)	1185
BstENI	CCTNNNNNAGG	1 cut(s)	544
BstF5I	GGATG	5 cut(s)	207, 531, 735, 950, 1069
BstFNI	CGCG	3 cut(s)	116, 140, 1716
BstH2I	RGCGCY	2 cut(s)	1404, 1765
BstHHI	GCGC	2 cut(s)	1403, 1764
BstKTI	GATC	6 cut(s)	487, 585, 1435, 1483, 1660, 1677
BstMAI	GTCTC	1 cut(s)	1437
BstMBI	GATC	6 cut(s)	484, 582, 1432, 1480, 1657, 1674
BstMCI	CGRYCG	2 cut(s)	48, 138
BstNI	CCWGG	5 cut(s)	466, 969, 1170, 1476, 1536
BstSCI	CCNGG	7 cut(s)	197, 464, 967, 1168, 1474, 1534, 1688
BstSFI	CTRYAG	2 cut(s)	1026, 1110
BstSLI	GKGCMC	2 cut(s)	679, 1267
BstUI	CGCG	3 cut(s)	116, 140, 1716
BstV2I	GAAGAC	2 cut(s)	12, 111
BstX2I	RGATCY	2 cut(s)	582, 1657
BstXI	CCANNNNNNTGG	1 cut(s)	856
BstYI	RGATCY	2 cut(s)	582, 1657
BstZI	CGGCCG	2 cut(s)	45, 135
BsuI	GTATCC	1 cut(s)	912
BtgI	CCRYGG	1 cut(s)	1185
BtsCI	GGATG	5 cut(s)	207, 531, 735, 950, 1069
BtsIMutI	CAGTG	2 cut(s)	1495, 1497
Cac8I	GCNNGC	4 cut(s)	558, 756, 1364, 1461
CaiI	CAGNNNCTG	1 cut(s)	1025
CciI	TCATGA	1 cut(s)	487
CciNI	GCGGCCGC	1 cut(s)	45
CfoI	GCGC	2 cut(s)	1403, 1764
Cfr13I	GGNCC	8 cut(s)	145, 195, 205, 675, 676, 700, 1034, 1163
CseI	GACGC	3 cut(s)	70, 105, 587
Csp6I	GTAC	5 cut(s)	410, 1017, 1173, 1624, 1756
CviAII	CATG	6 cut(s)	283, 488, 680, 1150, 1186, 1732
CviQI	GTAC	5 cut(s)	410, 1017, 1173, 1624, 1756
DinI	GGCGCC	1 cut(s)	1763
DpnI	GATC	6 cut(s)	486, 584, 1434, 1482, 1659, 1676
DpnII	GATC	6 cut(s)	484, 582, 1432, 1480, 1657, 1674
DraI	TTTAAA	1 cut(s)	1008
DrdI	GACNNNNNNGTC	1 cut(s)	319
DseDI	GACNNNNNNGTC	1 cut(s)	319
EaeI	YGGCCR	4 cut(s)	45, 135, 462, 1711
EagI	CGGCCG	2 cut(s)	45, 135
Eam1104I	CTCTTC	4 cut(s)	177, 1337, 1536, 1590
EarI	CTCTTC	4 cut(s)	177, 1337, 1536, 1590
EclXI	CGGCCG	2 cut(s)	45, 135
Eco130I	CCWWGG	2 cut(s)	1185, 1257
Eco24I	GRGCYC	2 cut(s)	679, 1619
Eco47I	GGWCC	5 cut(s)	145, 195, 205, 700, 1034
Eco47III	AGCGCT	1 cut(s)	1402
Eco52I	CGGCCG	2 cut(s)	45, 135
Eco57I	CTGAAG	3 cut(s)	411, 1061, 1872
Eco88I	CYCGRG	1 cut(s)	1104
EcoNI	CCTNNNNNAGG	1 cut(s)	544
EcoO109I	RGGNCCY	1 cut(s)	145
EcoRII	CCWGG	5 cut(s)	464, 967, 1168, 1474, 1534
EcoT14I	CCWWGG	2 cut(s)	1185, 1257
EcoT22I	ATGCAT	2 cut(s)	1354, 1414
EcoT38I	GRGCYC	2 cut(s)	679, 1619
EgeI	GGCGCC	1 cut(s)	1763
EheI	GGCGCC	1 cut(s)	1763
ErhI	CCWWGG	2 cut(s)	1185, 1257
FaeI	CATG	6 cut(s)	286, 491, 683, 1153, 1189, 1735
FaqI	GGGAC	1 cut(s)	1020
FatI	CATG	6 cut(s)	282, 487, 679, 1149, 1185, 1731
FauI	CCCGC	1 cut(s)	856
FauNDI	CATATG	1 cut(s)	1380
FblI	GTMKAC	1 cut(s)	1324
FokI	GGATG	5 cut(s)	214, 538, 742, 937, 1056
FriOI	GRGCYC	2 cut(s)	679, 1619
FspBI	CTAG	4 cut(s)	626, 879, 891, 1844
GlaI	GCGC	2 cut(s)	1402, 1763
GsuI	CTGGAG	2 cut(s)	1449, 1557
HaeII	RGCGCY	2 cut(s)	1404, 1765
HapII	CCGG	5 cut(s)	167, 198, 916, 1239, 1690
HgaI	GACGC	3 cut(s)	70, 105, 587
HhaI	GCGC	2 cut(s)	1403, 1764
Hin1I	GRCGYC	1 cut(s)	1762
Hin1II	CATG	6 cut(s)	286, 491, 683, 1153, 1189, 1735
Hin6I	GCGC	2 cut(s)	1401, 1762
HinP1I	GCGC	2 cut(s)	1401, 1762
HincII	GTYRAC	1 cut(s)	913
HindII	GTYRAC	1 cut(s)	913
HinfI	GANTC	5 cut(s)	536, 940, 947, 1388, 1781
HpaII	CCGG	5 cut(s)	167, 198, 916, 1239, 1690
HphI	GGTGA	4 cut(s)	749, 1490, 1604, 1871
Hpy166II	GTNNAC	4 cut(s)	913, 1265, 1325, 1756
Hpy188I	TCNGA	7 cut(s)	242, 603, 976, 1290, 1424, 1666, 1679
Hpy188III	TCNNGA	4 cut(s)	488, 944, 1440, 1484
Hpy8I	GTNNAC	4 cut(s)	913, 1265, 1325, 1756
Hpy99I	CGWCG	3 cut(s)	64, 89, 136
HpyCH4III	ACNGT	3 cut(s)	18, 838, 1490
Hsp92I	GRCGYC	1 cut(s)	1762
Hsp92II	CATG	6 cut(s)	286, 491, 683, 1153, 1189, 1735
HspAI	GCGC	2 cut(s)	1401, 1762
KasI	GGCGCC	1 cut(s)	1761
Kzo9I	GATC	6 cut(s)	484, 582, 1432, 1480, 1657, 1674
LguI	GCTCTTC	1 cut(s)	177
LmnI	GCTCC	1 cut(s)	1546
LweI	GCATC	3 cut(s)	409, 516, 1339
MaeI	CTAG	4 cut(s)	626, 879, 891, 1844
MaeIII	GTNAC	3 cut(s)	779, 1273, 1367
MalI	GATC	6 cut(s)	486, 584, 1434, 1482, 1659, 1676
MboI	GATC	6 cut(s)	484, 582, 1432, 1480, 1657, 1674
MfeI	CAATTG	1 cut(s)	1787
MflI	RGATCY	2 cut(s)	582, 1657
MhlI	GDGCHC	4 cut(s)	679, 1267, 1619, 1827
MlsI	TGGCCA	1 cut(s)	464
MluCI	AATT	6 cut(s)	383, 689, 824, 981, 1009, 1787
MluNI	TGGCCA	1 cut(s)	464
Mly113I	GGCGCC	1 cut(s)	1762
MlyI	GAGTC	2 cut(s)	545, 1775
MmeI	TCCRAC	1 cut(s)	820
Mox20I	TGGCCA	1 cut(s)	464
Mph1103I	ATGCAT	2 cut(s)	1354, 1414
MscI	TGGCCA	1 cut(s)	464
MseI	TTAA	2 cut(s)	1007, 1554
MslI	CAYNNNNRTG	3 cut(s)	644, 1357, 1379
Msp20I	TGGCCA	1 cut(s)	464
MspA1I	CMGCKG	5 cut(s)	379, 1025, 1031, 1751, 1850
MspI	CCGG	5 cut(s)	167, 198, 916, 1239, 1690
MspR9I	CCNGG	7 cut(s)	199, 466, 969, 1170, 1476, 1536, 1690
MunI	CAATTG	1 cut(s)	1787
Mva1269I	GAATGC	3 cut(s)	480, 720, 1352
MvaI	CCWGG	5 cut(s)	466, 969, 1170, 1476, 1536
MvnI	CGCG	3 cut(s)	116, 140, 1716
NarI	GGCGCC	1 cut(s)	1762
NciI	CCSGG	2 cut(s)	199, 1690
NcoI	CCATGG	1 cut(s)	1185
NdeI	CATATG	1 cut(s)	1380
NdeII	GATC	6 cut(s)	484, 582, 1432, 1480, 1657, 1674
NlaIII	CATG	6 cut(s)	286, 491, 683, 1153, 1189, 1735
NlaIV	GGNNCC	9 cut(s)	147, 196, 207, 677, 847, 1036, 1137, 1165, 1763
NmeAIII	GCCGAG	1 cut(s)	352
NmuCI	GTSAC	1 cut(s)	779
NotI	GCGGCCGC	1 cut(s)	45
NsiI	ATGCAT	2 cut(s)	1354, 1414
PaeR7I	CTCGAG	1 cut(s)	1104
PagI	TCATGA	1 cut(s)	487
PciSI	GCTCTTC	1 cut(s)	177
PcsI	WCGNNNNNNNCGW	2 cut(s)	81, 137
PctI	GAATGC	3 cut(s)	480, 720, 1352
PfeI	GAWTC	3 cut(s)	940, 947, 1388
PflMI	CCANNNNNTGG	1 cut(s)	1535
PfoI	TCCNGGA	2 cut(s)	197, 1534
PleI	GAGTC	2 cut(s)	544, 1775
PluTI	GGCGCC	1 cut(s)	1765
PpsI	GAGTC	2 cut(s)	544, 1775
PpuMI	RGGWCCY	1 cut(s)	145
Psp5II	RGGWCCY	1 cut(s)	145
Psp6I	CCWGG	5 cut(s)	464, 967, 1168, 1474, 1534
PspGI	CCWGG	5 cut(s)	464, 967, 1168, 1474, 1534
PspN4I	GGNNCC	9 cut(s)	147, 196, 207, 677, 847, 1036, 1137, 1165, 1763
PspOMI	GGGCCC	1 cut(s)	675
PspPI	GGNCC	8 cut(s)	145, 195, 205, 675, 676, 700, 1034, 1163
PspPPI	RGGWCCY	1 cut(s)	145
PspXI	VCTCGAGB	1 cut(s)	1104
PstI	CTGCAG	1 cut(s)	1030
PstNI	CAGNNNCTG	1 cut(s)	1025
PsuI	RGATCY	2 cut(s)	582, 1657
PvuII	CAGCTG	4 cut(s)	1025, 1031, 1751, 1850
RsaI	GTAC	5 cut(s)	411, 1018, 1174, 1625, 1757
RsaNI	GTAC	5 cut(s)	410, 1017, 1173, 1624, 1756
RseI	CAYNNNNRTG	3 cut(s)	644, 1357, 1379
SapI	GCTCTTC	1 cut(s)	177
SaqAI	TTAA	2 cut(s)	1007, 1554
Sau3AI	GATC	6 cut(s)	484, 582, 1432, 1480, 1657, 1674
Sau96I	GGNCC	8 cut(s)	145, 195, 205, 675, 676, 700, 1034, 1163
SchI	GAGTC	2 cut(s)	545, 1775
ScrFI	CCNGG	7 cut(s)	199, 466, 969, 1170, 1476, 1536, 1690
SduI	GDGCHC	4 cut(s)	679, 1267, 1619, 1827
SfaNI	GCATC	3 cut(s)	409, 516, 1339
SfcI	CTRYAG	2 cut(s)	1026, 1110
SfoI	GGCGCC	1 cut(s)	1763
Sfr274I	CTCGAG	1 cut(s)	1104
SinI	GGWCC	5 cut(s)	145, 195, 205, 700, 1034
SlaI	CTCGAG	1 cut(s)	1104
SmiMI	CAYNNNNRTG	3 cut(s)	644, 1357, 1379
SmlI	CTYRAG	2 cut(s)	987, 1104
SmoI	CTYRAG	2 cut(s)	987, 1104
Sse9I	AATT	6 cut(s)	383, 689, 824, 981, 1009, 1787
SspDI	GGCGCC	1 cut(s)	1761
SspI	AATATT	2 cut(s)	511, 1060
SspMI	CTAG	4 cut(s)	626, 879, 891, 1844
StyD4I	CCNGG	7 cut(s)	197, 464, 967, 1168, 1474, 1534, 1688
StyI	CCWWGG	2 cut(s)	1185, 1257
TaaI	ACNGT	3 cut(s)	18, 838, 1490
TaqI	TCGA	8 cut(s)	11, 155, 279, 723, 943, 1105, 1207, 1439
TasI	AATT	6 cut(s)	383, 689, 824, 981, 1009, 1787
TatI	WGTACW	3 cut(s)	409, 1016, 1623
TauI	GCSGC	8 cut(s)	8, 47, 50, 53, 93, 96, 140, 1716
TfiI	GAWTC	3 cut(s)	940, 947, 1388
Tru1I	TTAA	2 cut(s)	1007, 1554
Tru9I	TTAA	2 cut(s)	1007, 1554
TscAI	CASTG	2 cut(s)	1495, 1504
TseFI	GTSAC	1 cut(s)	779
Tsp45I	GTSAC	1 cut(s)	779
TspDTI	ATGAA	8 cut(s)	189, 471, 504, 696, 746, 1324, 1527, 1667
TspGWI	ACGGA	3 cut(s)	99, 497, 742
TspRI	CASTG	2 cut(s)	1495, 1504
Van91I	CCANNNNNTGG	1 cut(s)	1535
VneI	GTGCAC	1 cut(s)	1263
VpaK11BI	GGWCC	5 cut(s)	145, 195, 205, 700, 1034
XagI	CCTNNNNNAGG	1 cut(s)	544
XhoI	CTCGAG	1 cut(s)	1104
XmiI	GTMKAC	1 cut(s)	1324
XspI	CTAG	4 cut(s)	626, 879, 891, 1844
Zsp2I	ATGCAT	2 cut(s)	1354, 1414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.