Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0008485

Physical Location & Seq

Genomic Coordinates Forward (+)

22171604 .. 22177549

Gene Structure 5946 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1260100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGTTGCTGCCTCGAAGCTGTCTTCGTGCATAGCAATGGCGGTCGCGGCGGCCTCCATGCCCGCGCTCTCCAACCGCACCTACGCCGATTCTCCCTTCCGATTCAATCCGTTCTCGTATTCTTCTCCTTCTCCTCCTCCTCCGCCTTCCGCCGCTCCGGCGGACCAGATCCCCAATGCGAAATCGGAACCGCAAGCTGAAGAGCCCAGAGGGTCGGGGTTCGATCCCGAGGCTCTCGAACGAGGTGCCAAAGCTCTCCGCGAAATCAATTCCTCTAAGTTATCCAAGCAGGTTTTTAGTCTGATGAGGAGCCAAGAAAAAAGTCGTCTCACCGAGTTGGATGCAGAGAAGGCTCATTTTGAAGCAATACAAGCTCAAAATGATCTTGAAAGGAGTAAGAACATGGCTGAGGAACAATTAAATATACTGCAACAAGAAGCACAGGCAAAGGCTCAAATGCTTCGTATGGAAGATGAACACGCTAGGAATAGAATGAAGATGGATCATGAAAAGCAGAGGCAGAATAATGCTGAAATGCTTAGGATGCAAGAGGAGTCAAATATCCGAAAAGAGAAAGCAAGACTGGCTACTGAGGCACAGAACCAAGAGCAGCAGCGCCAAACTGAAAGAGAGAAACATGAATTAGAACTAAAAAACATAAAAGCGGAGGCCATTGCAAAGGCTAAAGGTCGGGCCCATGAAGAAAAACTGAATGCGGAACTTAACAGGAATATGCTTATAGATCAGATGAATGGTGAAAAAGAAAAATGGCTTGCTGCAATCAATACAACTTTTGGTCACATTGAAGGGGGCATTAGAACTTTGCTGACTGATAGGAATAAGTTGGTTATGACCGTTGGAGGTGCTACAGCAGTGGCTGCAGGCGTTTATACAACTAGAGAAGGTTCTAGAGTTATATGGGGATATGTCAACCGGCTGCTAGGGCAGCCATCTCTGATTCGAGAATCATCCATTGAAAGATTTCCAGGTTCAGAGATGATTTCTCTAGCAAAGAATAAAGTTTTAAATTACAGTACTGGATCTTCGCAAGGCAAGAATGGTCTTGCAAATATAATTCTCCATCCTTCGTTGCGGAGCAGAATAGAGCACCTTGCTCGAGCTACAGCAAACACTAAGGCTCACCAAGCCCCCTTTCGCAACATGATGTTTTATGGCCCCCCTGGCACTGGTAAAACCATGGTTGCAAGAGAAATAGCTCGAAAATCGGGTTTGGATTATGCTATGATGACTGGAGGAGATGTTGCACCCTTGGGTGCACAGGCTGTTACTAAGATTCATCAGATATTTGATTGGGCTAAAAAATCAAACAAAGGTCTACTGCTTTTTATTGACGAGGCAGATGCTTTCCTATGCGAGCGAAACAGTACACACATGAGTGAAGCTCAACGTAGTGCTTTAAATGCATTGCTCTTCCGAACTGGAGACCAGTCAAGAGACATAGTTCTAGTACTTGCCACAAACAGGCCAGGAGATCTTGACGGCGCTATCACTGACCGGATGGATGAAGTGATTGAGTTCCCAATTCCTGGGGAGGAGGAACGATTCAAACTTTTGAAGCTCTATTTGAACAAATATCTTGGTGATGAAGGCGAAAGCTCCAAGTCAGGCATTTTCCTGAAGAAGAAACCACAAAAGATTGTGATAAAGGATGTGTCTGATGATCTGATTCGAGAGGCTGCACGTAAGACAGAAGGGTTCTCTGGCCGTGAGATAGCAAAACTCATGGCCAGCGTCCAAGCAGCTGTGTATGGACGCGAAGACTGTGTACTGGATTCGCAATTGTTGGAGGAAATTGTAGATTACAAAGTTACAGAACACCACCAAAGAATGAAACTAGCCGCTGAAGCTGGTCATCCGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA DUF3523

Protein Analysis

628

Amino Acids

69.77

Weight (kDa)

8.61

Isoelectric Point (pI)

46.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATAD3_N	PF12037	60 - 321	8.1e-93	ATPase family AAA domain-containing protein 3, N-terminal
AAA	PF00004	388 - 514	1.5e-27	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18330 AT4G36580
fragaria_vesca	FvH4_1g13120 FvH4_1g13120 FvH4_1g13120
malus_domestica	MD02G1145900.v1.1 MD15G1260100.v1.1
prunus_persica	Prupe.7G156000_v2.0.a1 Prupe.7G156000_v2.0.a1
pyrus_communis	pycom02g11540 pycom02g11550 pycom15g22750
rosa_chinensis	RchiOBHm_Chr2g0101291
rosa_laevigata	RLG00000017067
rosa_multiflora	Rmu_co8334191.1_g000001 Rmu_sc0006128.1_g000022
rosa_roxburghii	Rroxscaffold_2G00141430
rosa_rugosa	Rorug02G0099300
rosa_samantha	Rh2AG145800 Rh2BG151200 Rh2CG151700 Rh2DG151300
rosa_wichuraiana	Rw2G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	280
AccB1I	GGYRCC	1 cut(s)	245
AccB7I	CCANNNNNTGG	1 cut(s)	1547
AccBSI	CCGCTC	1 cut(s)	155
AccI	GTMKAC	1 cut(s)	1336
AccII	CGCG	4 cut(s)	47, 65, 261, 1776
AclWI	GGATC	4 cut(s)	163, 218, 510, 1048
AcoI	YGGCCR	2 cut(s)	1723, 1746
AcuI	CTGAAG	3 cut(s)	219, 1658, 1884
AfaI	GTAC	4 cut(s)	1036, 1387, 1470, 1788
AfiI	CCNNNNNNNGG	3 cut(s)	1187, 1482, 1547
AgsI	TTSAA	8 cut(s)	106, 362, 389, 806, 977, 1567, 1576, 1588
AjnI	CCWGG	4 cut(s)	985, 1180, 1486, 1546
AjuI	GAANNNNNNNTTGG	2 cut(s)	1137, 1169
AleI	CACNNNNGTG	1 cut(s)	1395
Alw21I	GWGCWC	2 cut(s)	1110, 1279
Alw26I	GTCTC	3 cut(s)	332, 1437, 1449
Alw44I	GTGCAC	1 cut(s)	1275
AlwI	GGATC	4 cut(s)	163, 218, 510, 1048
AlwNI	CAGNNNCTG	1 cut(s)	878
Ama87I	CYCGRG	2 cut(s)	227, 1116
AoxI	GGCC	7 cut(s)	51, 669, 693, 1174, 1484, 1723, 1746
ApaI	GGGCCC	1 cut(s)	697
ApaLI	GTGCAC	1 cut(s)	1275
ApeKI	GCWGC	9 cut(s)	8, 610, 613, 776, 878, 937, 946, 1697, 1760
Asp700I	GAANNNNTTC	1 cut(s)	981
AspLEI	GCGC	3 cut(s)	67, 618, 1505
AspS9I	GGNCC	4 cut(s)	163, 693, 694, 1175
AsuHPI	GGTGA	4 cut(s)	322, 767, 1133, 1613
AvaI	CYCGRG	2 cut(s)	227, 1116
AvaII	GGWCC	1 cut(s)	163
BaeGI	GKGCMC	2 cut(s)	697, 1279
BalI	TGGCCA	1 cut(s)	1748
BanI	GGYRCC	1 cut(s)	245
BanII	GRGCYC	2 cut(s)	207, 697
BarI	GAAGNNNNNNTAC	4 cut(s)	1027, 1059, 1770, 1802
BbsI	GAAGAC	2 cut(s)	15, 1785
Bbv12I	GWGCWC	2 cut(s)	1110, 1279
BbvCI	CCTCAGC	1 cut(s)	408
BbvI	GCAGC	8 cut(s)	622, 625, 763, 865, 924, 958, 1684, 1772
BccI	CCATC	4 cut(s)	493, 958, 1089, 1513
BceAI	ACGGC	2 cut(s)	1516, 1710
BcgI	CGANNNNNNTGC	8 cut(s)	227, 261, 323, 357, 1097, 1131, 1343, 1377
BciT130I	CCWGG	4 cut(s)	987, 1182, 1488, 1548
BcoDI	GTCTC	3 cut(s)	332, 1437, 1449
BfaI	CTAG	7 cut(s)	483, 897, 909, 941, 1007, 1466, 1856
BfmI	CTRYAG	3 cut(s)	867, 879, 1122
BfoI	RGCGCY	2 cut(s)	619, 1506
BfuAI	ACCTGC	1 cut(s)	280
BglI	GCCNNNNNGGC	2 cut(s)	158, 1182
BglII	AGATCT	1 cut(s)	1492
BmcAI	AGTACT	2 cut(s)	1036, 1470
Bme1390I	CCNGG	4 cut(s)	987, 1182, 1488, 1548
Bme18I	GGWCC	1 cut(s)	163
BmeT110I	CYCGRG	2 cut(s)	227, 1116
BmgT120I	GGNCC	4 cut(s)	163, 693, 694, 1175
BmiI	GGNNCC	5 cut(s)	189, 247, 311, 695, 1177
BmrFI	CCNGG	4 cut(s)	987, 1182, 1488, 1548
BmsI	GCATC	3 cut(s)	331, 534, 1351
BpiI	GAAGAC	2 cut(s)	15, 1785
BplI	GAGNNNNNCTC	2 cut(s)	1387, 1419
BpmI	CTGGAG	2 cut(s)	1272, 1461
Bpu10I	CCTNAGC	2 cut(s)	408, 539
BsaAI	YACGTR	1 cut(s)	1703
BsaI	GGTCTC	1 cut(s)	1437
BsaJI	CCNNGG	5 cut(s)	228, 1180, 1197, 1269, 1547
BsaWI	WCCGGW	1 cut(s)	1515
BsaXI	ACNNNNNCTCC	2 cut(s)	1245, 1275
Bsc4I	CCNNNNNNNGG	3 cut(s)	1187, 1482, 1547
Bse118I	RCCGGY	1 cut(s)	933
Bse1I	ACTGG	7 cut(s)	588, 1042, 1192, 1255, 1444, 1447, 1794
Bse3DI	GCAATG	3 cut(s)	42, 672, 1424
BseBI	CCWGG	4 cut(s)	987, 1182, 1488, 1548
BseDI	CCNNGG	5 cut(s)	228, 1180, 1197, 1269, 1547
BseGI	GGATG	8 cut(s)	346, 549, 968, 1081, 1524, 1528, 1675, 1873
BseLI	CCNNNNNNNGG	3 cut(s)	1187, 1482, 1547
BseMI	GCAATG	3 cut(s)	42, 672, 1424
BseMII	CTCAG	2 cut(s)	399, 582
BseNI	ACTGG	7 cut(s)	588, 1042, 1192, 1255, 1444, 1447, 1794
BseRI	GAGGAG	7 cut(s)	123, 126, 129, 322, 566, 1269, 1568
BseSI	GKGCMC	2 cut(s)	697, 1279
BseXI	GCAGC	8 cut(s)	622, 625, 763, 865, 924, 958, 1684, 1772
BsgI	GTGCAG	1 cut(s)	1683
Bsh1236I	CGCG	4 cut(s)	47, 65, 261, 1776
Bsh1285I	CGRYCG	1 cut(s)	45
BshFI	GGCC	7 cut(s)	53, 671, 695, 1176, 1486, 1725, 1748
BshNI	GGYRCC	1 cut(s)	245
BsiEI	CGRYCG	1 cut(s)	45
BsiHKAI	GWGCWC	2 cut(s)	1110, 1279
BsiHKCI	CYCGRG	2 cut(s)	227, 1116
BsiSI	CCGG	4 cut(s)	158, 934, 1516, 1877
BslI	CCNNNNNNNGG	3 cut(s)	1187, 1482, 1547
BsmAI	GTCTC	3 cut(s)	332, 1437, 1449
BsmBI	CGTCTC	1 cut(s)	332
BsmI	GAATGC	1 cut(s)	718
BsnI	GGCC	7 cut(s)	53, 671, 695, 1176, 1486, 1725, 1748
Bso31I	GGTCTC	1 cut(s)	1437
BsoBI	CYCGRG	2 cut(s)	227, 1116
Bsp120I	GGGCCC	1 cut(s)	693
Bsp1286I	GDGCHC	4 cut(s)	207, 697, 1110, 1279
Bsp143I	GATC	8 cut(s)	168, 223, 382, 502, 742, 1040, 1492, 1681
Bsp19I	CCATGG	1 cut(s)	1197
BspANI	GGCC	7 cut(s)	53, 671, 695, 1176, 1486, 1725, 1748
BspCNI	CTCAG	2 cut(s)	400, 583
BspFNI	CGCG	4 cut(s)	47, 65, 261, 1776
BspHI	TCATGA	1 cut(s)	505
BspLI	GGNNCC	5 cut(s)	189, 247, 311, 695, 1177
BspMAI	CTGCAG	1 cut(s)	883
BspMI	ACCTGC	1 cut(s)	280
BspPI	GGATC	4 cut(s)	163, 218, 510, 1048
BspQI	GCTCTTC	2 cut(s)	195, 1436
BspT107I	GGYRCC	1 cut(s)	245
BspTNI	GGTCTC	1 cut(s)	1437
BsrBI	CCGCTC	1 cut(s)	155
BsrDI	GCAATG	3 cut(s)	42, 672, 1424
BsrFI	RCCGGY	1 cut(s)	933
BsrI	ACTGG	7 cut(s)	588, 1042, 1192, 1255, 1444, 1447, 1794
BssAI	RCCGGY	1 cut(s)	933
BssECI	CCNNGG	5 cut(s)	228, 1180, 1197, 1269, 1547
BssMI	GATC	8 cut(s)	168, 223, 382, 502, 742, 1040, 1492, 1681
BssT1I	CCWWGG	2 cut(s)	1197, 1269
Bst2UI	CCWGG	4 cut(s)	987, 1182, 1488, 1548
Bst4CI	ACNGT	4 cut(s)	856, 1034, 1385, 1784
Bst6I	CTCTTC	2 cut(s)	195, 1436
BstAPI	GCANNNNNTGC	1 cut(s)	878
BstBAI	YACGTR	1 cut(s)	1703
BstC8I	GCNNGC	6 cut(s)	63, 195, 774, 883, 1376, 1750
BstDEI	CTNAG	7 cut(s)	276, 408, 539, 591, 1134, 1290, 1881
BstDSI	CCRYGG	1 cut(s)	1197
BstF5I	GGATG	8 cut(s)	346, 549, 968, 1081, 1524, 1528, 1675, 1873
BstFNI	CGCG	4 cut(s)	47, 65, 261, 1776
BstH2I	RGCGCY	2 cut(s)	619, 1506
BstHHI	GCGC	3 cut(s)	67, 618, 1505
BstKTI	GATC	8 cut(s)	171, 226, 385, 505, 745, 1043, 1495, 1684
BstMAI	GTCTC	3 cut(s)	332, 1437, 1449
BstMBI	GATC	8 cut(s)	168, 223, 382, 502, 742, 1040, 1492, 1681
BstMCI	CGRYCG	1 cut(s)	45
BstNI	CCWGG	4 cut(s)	987, 1182, 1488, 1548
BstSCI	CCNGG	4 cut(s)	985, 1180, 1486, 1546
BstSFI	CTRYAG	3 cut(s)	867, 879, 1122
BstSLI	GKGCMC	2 cut(s)	697, 1279
BstUI	CGCG	4 cut(s)	47, 65, 261, 1776
BstV1I	GCAGC	8 cut(s)	622, 625, 763, 865, 924, 958, 1684, 1772
BstV2I	GAAGAC	2 cut(s)	15, 1785
BstX2I	RGATCY	3 cut(s)	168, 1040, 1492
BstYI	RGATCY	3 cut(s)	168, 1040, 1492
BsuRI	GGCC	7 cut(s)	53, 671, 695, 1176, 1486, 1725, 1748
BtgI	CCRYGG	1 cut(s)	1197
BtsCI	GGATG	8 cut(s)	346, 549, 968, 1081, 1524, 1528, 1675, 1873
BtsI	GCAGTG	1 cut(s)	879
BtsIMutI	CAGTG	3 cut(s)	879, 1185, 1509
BveI	ACCTGC	1 cut(s)	280
Cac8I	GCNNGC	6 cut(s)	63, 195, 774, 883, 1376, 1750
CaiI	CAGNNNCTG	1 cut(s)	878
CciI	TCATGA	1 cut(s)	505
CfoI	GCGC	3 cut(s)	67, 618, 1505
Cfr10I	RCCGGY	1 cut(s)	933
Cfr13I	GGNCC	4 cut(s)	163, 693, 694, 1175
CseI	GACGC	2 cut(s)	1741, 1782
Csp6I	GTAC	4 cut(s)	1035, 1386, 1469, 1787
CviAII	CATG	9 cut(s)	58, 403, 506, 638, 698, 1162, 1198, 1393, 1744
CviQI	GTAC	4 cut(s)	1035, 1386, 1469, 1787
DdeI	CTNAG	7 cut(s)	276, 408, 539, 591, 1134, 1290, 1881
DpnI	GATC	8 cut(s)	170, 225, 384, 504, 744, 1042, 1494, 1683
DpnII	GATC	8 cut(s)	168, 223, 382, 502, 742, 1040, 1492, 1681
DraI	TTTAAA	2 cut(s)	1026, 1419
EaeI	YGGCCR	2 cut(s)	1723, 1746
Eam1104I	CTCTTC	2 cut(s)	195, 1436
EarI	CTCTTC	2 cut(s)	195, 1436
EciI	GGCGGA	3 cut(s)	132, 139, 176
Eco130I	CCWWGG	2 cut(s)	1197, 1269
Eco24I	GRGCYC	2 cut(s)	207, 697
Eco31I	GGTCTC	1 cut(s)	1437
Eco47I	GGWCC	1 cut(s)	163
Eco57I	CTGAAG	3 cut(s)	219, 1658, 1884
Eco88I	CYCGRG	2 cut(s)	227, 1116
EcoRII	CCWGG	4 cut(s)	985, 1180, 1486, 1546
EcoT14I	CCWWGG	2 cut(s)	1197, 1269
EcoT22I	ATGCAT	1 cut(s)	1426
EcoT38I	GRGCYC	2 cut(s)	207, 697
ErhI	CCWWGG	2 cut(s)	1197, 1269
Esp3I	CGTCTC	1 cut(s)	332
FaeI	CATG	9 cut(s)	61, 406, 509, 641, 701, 1165, 1201, 1396, 1747
FatI	CATG	9 cut(s)	57, 402, 505, 637, 697, 1161, 1197, 1392, 1743
FauI	CCCGC	1 cut(s)	70
FblI	GTMKAC	1 cut(s)	1336
FokI	GGATG	8 cut(s)	353, 556, 955, 1068, 1531, 1535, 1682, 1860
FriOI	GRGCYC	2 cut(s)	207, 697
FspBI	CTAG	7 cut(s)	483, 897, 909, 941, 1007, 1466, 1856
GlaI	GCGC	3 cut(s)	66, 617, 1504
GsuI	CTGGAG	2 cut(s)	1272, 1461
HaeII	RGCGCY	2 cut(s)	619, 1506
HaeIII	GGCC	7 cut(s)	53, 671, 695, 1176, 1486, 1725, 1748
HapII	CCGG	4 cut(s)	158, 934, 1516, 1877
HgaI	GACGC	2 cut(s)	1741, 1782
HhaI	GCGC	3 cut(s)	67, 618, 1505
Hin1II	CATG	9 cut(s)	61, 406, 509, 641, 701, 1165, 1201, 1396, 1747
Hin6I	GCGC	3 cut(s)	65, 616, 1503
HinP1I	GCGC	3 cut(s)	65, 616, 1503
HincII	GTYRAC	1 cut(s)	931
HindII	GTYRAC	1 cut(s)	931
HinfI	GANTC	9 cut(s)	89, 102, 554, 958, 965, 1294, 1563, 1687, 1793
HpaII	CCGG	4 cut(s)	158, 934, 1516, 1877
HphI	GGTGA	4 cut(s)	322, 767, 1133, 1613
Hpy166II	GTNNAC	5 cut(s)	931, 1277, 1337, 1388, 1787
Hpy8I	GTNNAC	5 cut(s)	931, 1277, 1337, 1388, 1787
HpyAV	CCTTC	9 cut(s)	106, 138, 156, 343, 800, 896, 1095, 1601, 1706
HpyCH4III	ACNGT	4 cut(s)	856, 1034, 1385, 1784
HpyCH4IV	ACGT	2 cut(s)	1408, 1702
HpyF3I	CTNAG	7 cut(s)	276, 408, 539, 591, 1134, 1290, 1881
HpySE526I	ACGT	2 cut(s)	1408, 1702
Hsp92II	CATG	9 cut(s)	61, 406, 509, 641, 701, 1165, 1201, 1396, 1747
HspAI	GCGC	3 cut(s)	65, 616, 1503
Kzo9I	GATC	8 cut(s)	168, 223, 382, 502, 742, 1040, 1492, 1681
LguI	GCTCTTC	2 cut(s)	195, 1436
LmnI	GCTCC	4 cut(s)	160, 309, 1095, 1622
Lsp1109I	GCAGC	8 cut(s)	622, 625, 763, 865, 924, 958, 1684, 1772
LweI	GCATC	3 cut(s)	331, 534, 1351
MaeI	CTAG	7 cut(s)	483, 897, 909, 941, 1007, 1466, 1856
MaeII	ACGT	2 cut(s)	1408, 1702
MaeIII	GTNAC	3 cut(s)	797, 1285, 1828
MalI	GATC	8 cut(s)	170, 225, 384, 504, 744, 1042, 1494, 1683
MbiI	CCGCTC	1 cut(s)	155
MboI	GATC	8 cut(s)	168, 223, 382, 502, 742, 1040, 1492, 1681
MfeI	CAATTG	1 cut(s)	1799
MflI	RGATCY	3 cut(s)	168, 1040, 1492
MhlI	GDGCHC	4 cut(s)	207, 697, 1110, 1279
MlsI	TGGCCA	1 cut(s)	1748
MluCI	AATT	8 cut(s)	268, 416, 641, 1027, 1074, 1542, 1799, 1812
MluNI	TGGCCA	1 cut(s)	1748
MlyI	GAGTC	1 cut(s)	563
MmeI	TCCRAC	4 cut(s)	96, 318, 838, 1785
Mox20I	TGGCCA	1 cut(s)	1748
Mph1103I	ATGCAT	1 cut(s)	1426
MroXI	GAANNNNTTC	1 cut(s)	981
MscI	TGGCCA	1 cut(s)	1748
MseI	TTAA	4 cut(s)	419, 723, 1025, 1418
MslI	CAYNNNNRTG	2 cut(s)	35, 1395
Msp20I	TGGCCA	1 cut(s)	1748
MspA1I	CMGCKG	2 cut(s)	1763, 1862
MspI	CCGG	4 cut(s)	158, 934, 1516, 1877
MspR9I	CCNGG	4 cut(s)	987, 1182, 1488, 1548
MunI	CAATTG	1 cut(s)	1799
Mva1269I	GAATGC	1 cut(s)	718
MvaI	CCWGG	4 cut(s)	987, 1182, 1488, 1548
MvnI	CGCG	4 cut(s)	47, 65, 261, 1776
NcoI	CCATGG	1 cut(s)	1197
NdeII	GATC	8 cut(s)	168, 223, 382, 502, 742, 1040, 1492, 1681
NlaIII	CATG	9 cut(s)	61, 406, 509, 641, 701, 1165, 1201, 1396, 1747
NlaIV	GGNNCC	5 cut(s)	189, 247, 311, 695, 1177
NmuCI	GTSAC	1 cut(s)	797
NsiI	ATGCAT	1 cut(s)	1426
OliI	CACNNNNGTG	1 cut(s)	1395
PaeR7I	CTCGAG	1 cut(s)	1116
PagI	TCATGA	1 cut(s)	505
PciSI	GCTCTTC	2 cut(s)	195, 1436
PctI	GAATGC	1 cut(s)	718
PdmI	GAANNNNTTC	1 cut(s)	981
PfeI	GAWTC	8 cut(s)	89, 102, 958, 965, 1294, 1563, 1687, 1793
PflMI	CCANNNNNTGG	1 cut(s)	1547
PleI	GAGTC	1 cut(s)	562
PpsI	GAGTC	1 cut(s)	562
Ppu21I	YACGTR	1 cut(s)	1703
Psp6I	CCWGG	4 cut(s)	985, 1180, 1486, 1546
PspGI	CCWGG	4 cut(s)	985, 1180, 1486, 1546
PspN4I	GGNNCC	5 cut(s)	189, 247, 311, 695, 1177
PspOMI	GGGCCC	1 cut(s)	693
PspPI	GGNCC	4 cut(s)	163, 693, 694, 1175
PspXI	VCTCGAGB	1 cut(s)	1116
PstI	CTGCAG	1 cut(s)	883
PstNI	CAGNNNCTG	1 cut(s)	878
PsuI	RGATCY	3 cut(s)	168, 1040, 1492
PvuII	CAGCTG	1 cut(s)	1763
RsaI	GTAC	4 cut(s)	1036, 1387, 1470, 1788
RsaNI	GTAC	4 cut(s)	1035, 1386, 1469, 1787
RseI	CAYNNNNRTG	2 cut(s)	35, 1395
SapI	GCTCTTC	2 cut(s)	195, 1436
SaqAI	TTAA	4 cut(s)	419, 723, 1025, 1418
Sau3AI	GATC	8 cut(s)	168, 223, 382, 502, 742, 1040, 1492, 1681
Sau96I	GGNCC	4 cut(s)	163, 693, 694, 1175
ScaI	AGTACT	2 cut(s)	1036, 1470
SchI	GAGTC	1 cut(s)	563
ScrFI	CCNGG	4 cut(s)	987, 1182, 1488, 1548
SduI	GDGCHC	4 cut(s)	207, 697, 1110, 1279
SfaNI	GCATC	3 cut(s)	331, 534, 1351
SfcI	CTRYAG	3 cut(s)	867, 879, 1122
Sfr274I	CTCGAG	1 cut(s)	1116
SinI	GGWCC	1 cut(s)	163
SlaI	CTCGAG	1 cut(s)	1116
SmiMI	CAYNNNNRTG	2 cut(s)	35, 1395
SmlI	CTYRAG	1 cut(s)	1116
SmoI	CTYRAG	1 cut(s)	1116
Sse9I	AATT	8 cut(s)	268, 416, 641, 1027, 1074, 1542, 1799, 1812
SspMI	CTAG	7 cut(s)	483, 897, 909, 941, 1007, 1466, 1856
StyD4I	CCNGG	4 cut(s)	985, 1180, 1486, 1546
StyI	CCWWGG	2 cut(s)	1197, 1269
TaaI	ACNGT	4 cut(s)	856, 1034, 1385, 1784
TaiI	ACGT	2 cut(s)	1411, 1705
TaqI	TCGA	7 cut(s)	14, 222, 237, 961, 1117, 1219, 1690
TasI	AATT	8 cut(s)	268, 416, 641, 1027, 1074, 1542, 1799, 1812
TatI	WGTACW	4 cut(s)	1034, 1385, 1468, 1786
TauI	GCSGC	4 cut(s)	50, 53, 155, 1862
TfiI	GAWTC	8 cut(s)	89, 102, 958, 965, 1294, 1563, 1687, 1793
Tru1I	TTAA	4 cut(s)	419, 723, 1025, 1418
Tru9I	TTAA	4 cut(s)	419, 723, 1025, 1418
TscAI	CASTG	3 cut(s)	879, 1192, 1516
TseFI	GTSAC	1 cut(s)	797
TseI	GCWGC	9 cut(s)	8, 610, 613, 776, 878, 937, 946, 1697, 1760
Tsp45I	GTSAC	1 cut(s)	797
TspGWI	ACGGA	1 cut(s)	99
TspRI	CASTG	3 cut(s)	879, 1192, 1516
Van91I	CCANNNNNTGG	1 cut(s)	1547
VneI	GTGCAC	1 cut(s)	1275
VpaK11BI	GGWCC	1 cut(s)	163
XbaI	TCTAGA	1 cut(s)	908
XhoI	CTCGAG	1 cut(s)	1116
XmiI	GTMKAC	1 cut(s)	1336
XmnI	GAANNNNTTC	1 cut(s)	981
XspI	CTAG	7 cut(s)	483, 897, 909, 941, 1007, 1466, 1856
ZrmI	AGTACT	2 cut(s)	1036, 1470
Zsp2I	ATGCAT	1 cut(s)	1426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.