Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0008485

Physical Location & Seq

Genomic Coordinates Forward (+)

13316703 .. 13321477

Gene Structure 4775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG145800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGGCGGCCTCGAAACTGTCTTCGTGCTTAGCAATGGCTATTGCGGCGGCCGCTATGCCGACGCTCTCCACACGCGCCTACGCCGACGGCGGCGGCTTTCGCTTTTCTCCGTTCTCGTCTTCTTCTTCTTCTTCTTCTTCATCGGCCGCGAAGGACCCAAGTTCGGGTGGGAAGCCGGAATATGAAGCCGAAGAGCCAAGAGGGTCCGGGATGGACCCAGAGGCTTTAGAAAGAGCTGCCAAAGCTCTCAGAGAAATCAATAGCTCTAAGAACTCCAAGCAGATTTTCGACATGATGAGGAAGCAGGAACAAACTCGCCAGACTGAGTTGTCTGCTGAAAAGGCTCATTTTCAAGCTCAGCAATCTCATGCTGACATTGAAAGGCAGAGGAAATTGGCTGAAGAACAAAGAAATCTTGTACAGCAAGATGCACAGCGAAAGGCACAAGTTATGCGATACGAAGATGAACTGGCCAGGAAAAGAATGCAGACAGATCATGAAACCCAGAGGCAGCATAATATTGAGTTGGTTAGGATGCAAGAGGAGTCCTCTATGAGGAAAGAGCGAGCAAGACAGGCTACTGAGGAACAGATCCAAGCTCAGCAGCGTCAGACTGAAAAAGAGAGAGCTGAACTAGAAAGAGAAACCATAAGAGTGAAGGCCATAGCAGAGGCAGAAGGTCGGGCCCATGAAGCAAAATTGACTGAGGACCAAAACAGGAGAATGCTTATCGAACGGATGAATGGTGAAAAGGAAAAATGGCTTGCTGCAATAAATACAGCTTTCAGTCACATTGAAGGGGGTTTTAGAACTTTACTGACTGATAGGAATAAATTGGTTATGACCGTTGGAGGTGCCACAGCATTGGCTGCAGGTGTTTATACAACTAGAGAAGGTTCTAGGGTTCTATGGGGTTATGTCAACCGGATACTTGGGCAGCCATCTTTGATTCGAGAATCATCCATTGCAAGATTTCCAGGTTCAGATATAATTTCTCAAGCAAAGAATAAAGTTTTAAATTATAGTACAGCAGCTGCAGCTTCTGGTCCCCTGAAGAATGGTCTTGGAAATATTGTTCTCCATCCTTCGTTGCAGAGGAGAATAGAACAACTCGCTCGAGCTACAGCAAACACTAAGGCTCATCAGGCACCCTTTCGCAACATGATGTTTTATGGCCCCCCTGGTACTGGCAAAACCATGGTTGCAAGGGAAATAGCTCGAAAATCGGGTTTGGATTATGCTATGATGACTGGAGGAGATGTTGCACCCTTGGGTGCACAGGCTGTTACTAAAATCCATCAGATATTTGATTGGGCAAAAAAATCAAACAAAGGTCTACTACTCTTCATTGATGAGGCAGATGCATTCCTATGCGAGTACGTTAAATTTGTTCCTTTAAAGCTGTATTTTGCATCTTACTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA DUF3523

Protein Analysis

474

Amino Acids

52.8

Weight (kDa)

9.49

Isoelectric Point (pI)

49.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATAD3_N	PF12037	58 - 318	4.4e-104	ATPase family AAA domain-containing protein 3, N-terminal
AAA	PF00004	388 - 457	4.7e-15	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18330 AT4G36580
fragaria_vesca	FvH4_1g13120 FvH4_1g13120 FvH4_1g13120
malus_domestica	MD02G1145900.v1.1 MD15G1260100.v1.1
prunus_persica	Prupe.7G156000_v2.0.a1 Prupe.7G156000_v2.0.a1
pyrus_communis	pycom02g11540 pycom02g11550 pycom15g22750
rosa_chinensis	RchiOBHm_Chr2g0101291
rosa_laevigata	RLG00000017067
rosa_multiflora	Rmu_co8334191.1_g000001 Rmu_sc0006128.1_g000022
rosa_roxburghii	Rroxscaffold_2G00141430
rosa_rugosa	Rorug02G0099300
rosa_samantha	Rh2AG145800 Rh2BG151200 Rh2CG151700 Rh2DG151300
rosa_wichuraiana	Rw2G011380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	863
AasI	GACNNNNNNGTC	1 cut(s)	328
Acc36I	ACCTGC	1 cut(s)	863
AccB1I	GGYRCC	2 cut(s)	854, 1147
AccI	GTMKAC	1 cut(s)	1336
AccII	CGCG	2 cut(s)	75, 149
AciI	CCGC	7 cut(s)	5, 44, 47, 51, 90, 93, 147
AclWI	GGATC	1 cut(s)	586
AcoI	YGGCCR	3 cut(s)	48, 144, 471
AcsI	RAATTY	1 cut(s)	1385
AcuI	CTGAAG	2 cut(s)	420, 1073
AfaI	GTAC	4 cut(s)	420, 1027, 1186, 1379
AfiI	CCNNNNNNNGG	4 cut(s)	163, 164, 555, 1187
AgsI	TTSAA	3 cut(s)	353, 380, 797
AjnI	CCWGG	3 cut(s)	473, 976, 1180
AjuI	GAANNNNNNNTTGG	2 cut(s)	269, 301
AloI	GAACNNNNNNTCC	2 cut(s)	1059, 1091
Alw21I	GWGCWC	1 cut(s)	1279
Alw44I	GTGCAC	1 cut(s)	1275
AlwI	GGATC	1 cut(s)	586
AlwNI	CAGNNNCTG	2 cut(s)	1034, 1043
Ama87I	CYCGRG	1 cut(s)	1116
AoxI	GGCC	7 cut(s)	6, 48, 144, 471, 660, 684, 1174
ApaI	GGGCCC	1 cut(s)	688
ApaLI	GTGCAC	1 cut(s)	1275
ApeKI	GCWGC	9 cut(s)	236, 511, 604, 767, 869, 937, 1031, 1034, 1037
ApoI	RAATTY	1 cut(s)	1385
AspLEI	GCGC	1 cut(s)	77
AspS9I	GGNCC	8 cut(s)	154, 204, 214, 684, 685, 709, 1046, 1175
AsuC2I	CCSGG	1 cut(s)	208
AsuHPI	GGTGA	1 cut(s)	758
AvaI	CYCGRG	1 cut(s)	1116
AvaII	GGWCC	5 cut(s)	154, 204, 214, 709, 1046
BaeGI	GKGCMC	2 cut(s)	688, 1279
BalI	TGGCCA	1 cut(s)	473
BanI	GGYRCC	2 cut(s)	854, 1147
BanII	GRGCYC	1 cut(s)	688
BbsI	GAAGAC	2 cut(s)	12, 111
Bbv12I	GWGCWC	1 cut(s)	1279
BbvI	GCAGC	9 cut(s)	223, 523, 616, 754, 856, 949, 1021, 1043, 1049
BccI	CCATC	4 cut(s)	205, 949, 1089, 1305
BceAI	ACGGC	1 cut(s)	103
BciT130I	CCWGG	3 cut(s)	475, 978, 1182
BciVI	GTATCC	1 cut(s)	921
BcnI	CCSGG	1 cut(s)	208
BfaI	CTAG	3 cut(s)	635, 888, 900
BfmI	CTRYAG	3 cut(s)	870, 1035, 1122
BfuAI	ACCTGC	1 cut(s)	863
BfuI	GTATCC	1 cut(s)	921
BlpI	GCTNAGC	3 cut(s)	28, 357, 600
Bme1390I	CCNGG	4 cut(s)	208, 475, 978, 1182
Bme18I	GGWCC	5 cut(s)	154, 204, 214, 709, 1046
BmeT110I	CYCGRG	1 cut(s)	1116
BmgT120I	GGNCC	8 cut(s)	154, 204, 214, 684, 685, 709, 1046, 1175
BmiI	GGNNCC	8 cut(s)	156, 205, 216, 686, 856, 1048, 1149, 1177
BmrFI	CCNGG	4 cut(s)	208, 475, 978, 1182
BmsI	GCATC	4 cut(s)	418, 525, 1351, 1421
BpiI	GAAGAC	2 cut(s)	12, 111
BplI	GAGNNNNNCTC	2 cut(s)	533, 565
BpmI	CTGGAG	1 cut(s)	1272
Bpu1102I	GCTNAGC	3 cut(s)	28, 357, 600
BpuEI	CTTGAG	1 cut(s)	981
BpuMI	CCSGG	1 cut(s)	208
BsaJI	CCNNGG	3 cut(s)	1180, 1197, 1269
BsaWI	WCCGGW	1 cut(s)	924
BsaXI	ACNNNNNCTCC	2 cut(s)	1245, 1275
Bsc4I	CCNNNNNNNGG	4 cut(s)	163, 164, 555, 1187
Bse1I	ACTGG	3 cut(s)	474, 1192, 1255
Bse3DI	GCAATG	2 cut(s)	39, 963
BseBI	CCWGG	3 cut(s)	475, 978, 1182
BseDI	CCNNGG	3 cut(s)	1180, 1197, 1269
BseGI	GGATG	5 cut(s)	216, 540, 744, 959, 1081
BseLI	CCNNNNNNNGG	4 cut(s)	163, 164, 555, 1187
BseMI	GCAATG	2 cut(s)	39, 963
BseMII	CTCAG	6 cut(s)	262, 315, 371, 573, 614, 696
BseNI	ACTGG	3 cut(s)	474, 1192, 1255
BseRI	GAGGAG	3 cut(s)	557, 1111, 1269
BseSI	GKGCMC	2 cut(s)	688, 1279
BseX3I	CGGCCG	2 cut(s)	48, 144
BseXI	GCAGC	9 cut(s)	223, 523, 616, 754, 856, 949, 1021, 1043, 1049
Bsh1236I	CGCG	2 cut(s)	75, 149
Bsh1285I	CGRYCG	2 cut(s)	51, 147
BshFI	GGCC	7 cut(s)	8, 50, 146, 473, 662, 686, 1176
BshNI	GGYRCC	2 cut(s)	854, 1147
BsiEI	CGRYCG	2 cut(s)	51, 147
BsiHKAI	GWGCWC	1 cut(s)	1279
BsiHKCI	CYCGRG	1 cut(s)	1116
BsiSI	CCGG	3 cut(s)	176, 207, 925
BslFI	GGGAC	1 cut(s)	1032
BslI	CCNNNNNNNGG	4 cut(s)	163, 164, 555, 1187
BsmFI	GGGAC	1 cut(s)	1032
BsmI	GAATGC	3 cut(s)	489, 729, 1364
BsnI	GGCC	7 cut(s)	8, 50, 146, 473, 662, 686, 1176
BsoBI	CYCGRG	1 cut(s)	1116
Bsp120I	GGGCCC	1 cut(s)	684
Bsp1286I	GDGCHC	2 cut(s)	688, 1279
Bsp1407I	TGTACA	1 cut(s)	418
Bsp143I	GATC	2 cut(s)	493, 591
Bsp1720I	GCTNAGC	3 cut(s)	28, 357, 600
Bsp19I	CCATGG	1 cut(s)	1197
BspACI	CCGC	7 cut(s)	5, 44, 47, 51, 90, 93, 147
BspANI	GGCC	7 cut(s)	8, 50, 146, 473, 662, 686, 1176
BspCNI	CTCAG	6 cut(s)	261, 316, 370, 574, 613, 697
BspFNI	CGCG	2 cut(s)	75, 149
BspHI	TCATGA	1 cut(s)	496
BspLI	GGNNCC	8 cut(s)	156, 205, 216, 686, 856, 1048, 1149, 1177
BspMAI	CTGCAG	2 cut(s)	874, 1039
BspMI	ACCTGC	1 cut(s)	863
BspPI	GGATC	1 cut(s)	586
BspQI	GCTCTTC	1 cut(s)	186
BspT107I	GGYRCC	2 cut(s)	854, 1147
BsrDI	GCAATG	2 cut(s)	39, 963
BsrGI	TGTACA	1 cut(s)	418
BsrI	ACTGG	3 cut(s)	474, 1192, 1255
BssECI	CCNNGG	3 cut(s)	1180, 1197, 1269
BssMI	GATC	2 cut(s)	493, 591
BssT1I	CCWWGG	2 cut(s)	1197, 1269
Bst2UI	CCWGG	3 cut(s)	475, 978, 1182
Bst4CI	ACNGT	3 cut(s)	18, 847, 1421
Bst6I	CTCTTC	2 cut(s)	186, 1349
BstAPI	GCANNNNNTGC	1 cut(s)	869
BstAUI	TGTACA	1 cut(s)	418
BstC8I	GCNNGC	2 cut(s)	567, 765
BstDEI	CTNAG	9 cut(s)	28, 248, 267, 324, 357, 582, 600, 705, 1134
BstDSI	CCRYGG	1 cut(s)	1197
BstENI	CCTNNNNNAGG	1 cut(s)	553
BstF5I	GGATG	5 cut(s)	216, 540, 744, 959, 1081
BstFNI	CGCG	2 cut(s)	75, 149
BstHHI	GCGC	1 cut(s)	77
BstKTI	GATC	2 cut(s)	496, 594
BstMBI	GATC	2 cut(s)	493, 591
BstMCI	CGRYCG	2 cut(s)	51, 147
BstNI	CCWGG	3 cut(s)	475, 978, 1182
BstSCI	CCNGG	4 cut(s)	206, 473, 976, 1180
BstSFI	CTRYAG	3 cut(s)	870, 1035, 1122
BstSLI	GKGCMC	2 cut(s)	688, 1279
BstUI	CGCG	2 cut(s)	75, 149
BstV1I	GCAGC	9 cut(s)	223, 523, 616, 754, 856, 949, 1021, 1043, 1049
BstV2I	GAAGAC	2 cut(s)	12, 111
BstX2I	RGATCY	1 cut(s)	591
BstXI	CCANNNNNNTGG	1 cut(s)	865
BstYI	RGATCY	1 cut(s)	591
BstZI	CGGCCG	2 cut(s)	48, 144
BsuI	GTATCC	1 cut(s)	921
BsuRI	GGCC	7 cut(s)	8, 50, 146, 473, 662, 686, 1176
BtgI	CCRYGG	1 cut(s)	1197
BtsCI	GGATG	5 cut(s)	216, 540, 744, 959, 1081
BveI	ACCTGC	1 cut(s)	863
Cac8I	GCNNGC	2 cut(s)	567, 765
CaiI	CAGNNNCTG	2 cut(s)	1034, 1043
CciI	TCATGA	1 cut(s)	496
CciNI	GCGGCCGC	1 cut(s)	48
CfoI	GCGC	1 cut(s)	77
Cfr13I	GGNCC	8 cut(s)	154, 204, 214, 684, 685, 709, 1046, 1175
CseI	GACGC	2 cut(s)	70, 596
Csp6I	GTAC	4 cut(s)	419, 1026, 1185, 1378
CviAII	CATG	6 cut(s)	292, 368, 497, 689, 1162, 1198
CviQI	GTAC	4 cut(s)	419, 1026, 1185, 1378
DdeI	CTNAG	9 cut(s)	28, 248, 267, 324, 357, 582, 600, 705, 1134
DpnI	GATC	2 cut(s)	495, 593
DpnII	GATC	2 cut(s)	493, 591
DraI	TTTAAA	2 cut(s)	1017, 1398
DrdI	GACNNNNNNGTC	1 cut(s)	328
DseDI	GACNNNNNNGTC	1 cut(s)	328
EaeI	YGGCCR	3 cut(s)	48, 144, 471
EagI	CGGCCG	2 cut(s)	48, 144
Eam1104I	CTCTTC	2 cut(s)	186, 1349
EarI	CTCTTC	2 cut(s)	186, 1349
EclXI	CGGCCG	2 cut(s)	48, 144
Eco130I	CCWWGG	2 cut(s)	1197, 1269
Eco24I	GRGCYC	1 cut(s)	688
Eco47I	GGWCC	5 cut(s)	154, 204, 214, 709, 1046
Eco52I	CGGCCG	2 cut(s)	48, 144
Eco57I	CTGAAG	2 cut(s)	420, 1073
Eco88I	CYCGRG	1 cut(s)	1116
EcoNI	CCTNNNNNAGG	1 cut(s)	553
EcoO109I	RGGNCCY	1 cut(s)	154
EcoRII	CCWGG	3 cut(s)	473, 976, 1180
EcoT14I	CCWWGG	2 cut(s)	1197, 1269
EcoT22I	ATGCAT	1 cut(s)	1366
EcoT38I	GRGCYC	1 cut(s)	688
ErhI	CCWWGG	2 cut(s)	1197, 1269
FaeI	CATG	6 cut(s)	295, 371, 500, 692, 1165, 1201
FaqI	GGGAC	1 cut(s)	1032
FatI	CATG	6 cut(s)	291, 367, 496, 688, 1161, 1197
FblI	GTMKAC	1 cut(s)	1336
FokI	GGATG	5 cut(s)	223, 547, 751, 946, 1068
FriOI	GRGCYC	1 cut(s)	688
FspBI	CTAG	3 cut(s)	635, 888, 900
GlaI	GCGC	1 cut(s)	76
GsuI	CTGGAG	1 cut(s)	1272
HaeIII	GGCC	7 cut(s)	8, 50, 146, 473, 662, 686, 1176
HapII	CCGG	3 cut(s)	176, 207, 925
HgaI	GACGC	2 cut(s)	70, 596
HhaI	GCGC	1 cut(s)	77
Hin1II	CATG	6 cut(s)	295, 371, 500, 692, 1165, 1201
Hin6I	GCGC	1 cut(s)	75
HinP1I	GCGC	1 cut(s)	75
HincII	GTYRAC	1 cut(s)	922
HindII	GTYRAC	1 cut(s)	922
HinfI	GANTC	3 cut(s)	545, 949, 956
HpaII	CCGG	3 cut(s)	176, 207, 925
HphI	GGTGA	1 cut(s)	758
Hpy166II	GTNNAC	3 cut(s)	922, 1277, 1337
Hpy188I	TCNGA	4 cut(s)	251, 612, 985, 1302
Hpy188III	TCNNGA	2 cut(s)	497, 953
Hpy8I	GTNNAC	3 cut(s)	922, 1277, 1337
Hpy99I	CGWCG	2 cut(s)	64, 89
HpyAV	CCTTC	6 cut(s)	145, 652, 671, 791, 887, 1095
HpyCH4III	ACNGT	3 cut(s)	18, 847, 1421
HpyCH4IV	ACGT	1 cut(s)	1380
HpyF3I	CTNAG	9 cut(s)	28, 248, 267, 324, 357, 582, 600, 705, 1134
HpySE526I	ACGT	1 cut(s)	1380
Hsp92II	CATG	6 cut(s)	295, 371, 500, 692, 1165, 1201
HspAI	GCGC	1 cut(s)	75
Kzo9I	GATC	2 cut(s)	493, 591
LguI	GCTCTTC	1 cut(s)	186
Lsp1109I	GCAGC	9 cut(s)	223, 523, 616, 754, 856, 949, 1021, 1043, 1049
LweI	GCATC	4 cut(s)	418, 525, 1351, 1421
MaeI	CTAG	3 cut(s)	635, 888, 900
MaeII	ACGT	1 cut(s)	1380
MaeIII	GTNAC	2 cut(s)	788, 1285
MalI	GATC	2 cut(s)	495, 593
MboI	GATC	2 cut(s)	493, 591
MflI	RGATCY	1 cut(s)	591
MhlI	GDGCHC	2 cut(s)	688, 1279
MlsI	TGGCCA	1 cut(s)	473
MluCI	AATT	6 cut(s)	392, 698, 833, 990, 1018, 1385
MluNI	TGGCCA	1 cut(s)	473
MlyI	GAGTC	1 cut(s)	554
MmeI	TCCRAC	1 cut(s)	829
Mox20I	TGGCCA	1 cut(s)	473
Mph1103I	ATGCAT	1 cut(s)	1366
MscI	TGGCCA	1 cut(s)	473
MseI	TTAA	3 cut(s)	1016, 1383, 1397
MslI	CAYNNNNRTG	2 cut(s)	653, 1369
Msp20I	TGGCCA	1 cut(s)	473
MspA1I	CMGCKG	1 cut(s)	1034
MspI	CCGG	3 cut(s)	176, 207, 925
MspR9I	CCNGG	4 cut(s)	208, 475, 978, 1182
Mva1269I	GAATGC	3 cut(s)	489, 729, 1364
MvaI	CCWGG	3 cut(s)	475, 978, 1182
MvnI	CGCG	2 cut(s)	75, 149
NciI	CCSGG	1 cut(s)	208
NcoI	CCATGG	1 cut(s)	1197
NdeII	GATC	2 cut(s)	493, 591
NlaIII	CATG	6 cut(s)	295, 371, 500, 692, 1165, 1201
NlaIV	GGNNCC	8 cut(s)	156, 205, 216, 686, 856, 1048, 1149, 1177
NmuCI	GTSAC	1 cut(s)	788
NotI	GCGGCCGC	1 cut(s)	48
NsiI	ATGCAT	1 cut(s)	1366
PaeR7I	CTCGAG	1 cut(s)	1116
PagI	TCATGA	1 cut(s)	496
PaqCI	CACCTGC	1 cut(s)	863
PciSI	GCTCTTC	1 cut(s)	186
PctI	GAATGC	3 cut(s)	489, 729, 1364
PfeI	GAWTC	2 cut(s)	949, 956
PfoI	TCCNGGA	1 cut(s)	206
PleI	GAGTC	1 cut(s)	553
PpsI	GAGTC	1 cut(s)	553
PpuMI	RGGWCCY	1 cut(s)	154
Psp5II	RGGWCCY	1 cut(s)	154
Psp6I	CCWGG	3 cut(s)	473, 976, 1180
PspGI	CCWGG	3 cut(s)	473, 976, 1180
PspN4I	GGNNCC	8 cut(s)	156, 205, 216, 686, 856, 1048, 1149, 1177
PspOMI	GGGCCC	1 cut(s)	684
PspPI	GGNCC	8 cut(s)	154, 204, 214, 684, 685, 709, 1046, 1175
PspPPI	RGGWCCY	1 cut(s)	154
PspXI	VCTCGAGB	1 cut(s)	1116
PstI	CTGCAG	2 cut(s)	874, 1039
PstNI	CAGNNNCTG	2 cut(s)	1034, 1043
PsuI	RGATCY	1 cut(s)	591
PvuII	CAGCTG	1 cut(s)	1034
RsaI	GTAC	4 cut(s)	420, 1027, 1186, 1379
RsaNI	GTAC	4 cut(s)	419, 1026, 1185, 1378
RseI	CAYNNNNRTG	2 cut(s)	653, 1369
SapI	GCTCTTC	1 cut(s)	186
SaqAI	TTAA	3 cut(s)	1016, 1383, 1397
Sau3AI	GATC	2 cut(s)	493, 591
Sau96I	GGNCC	8 cut(s)	154, 204, 214, 684, 685, 709, 1046, 1175
SchI	GAGTC	1 cut(s)	554
ScrFI	CCNGG	4 cut(s)	208, 475, 978, 1182
SduI	GDGCHC	2 cut(s)	688, 1279
SfaNI	GCATC	4 cut(s)	418, 525, 1351, 1421
SfcI	CTRYAG	3 cut(s)	870, 1035, 1122
Sfr274I	CTCGAG	1 cut(s)	1116
SinI	GGWCC	5 cut(s)	154, 204, 214, 709, 1046
SlaI	CTCGAG	1 cut(s)	1116
SmiMI	CAYNNNNRTG	2 cut(s)	653, 1369
SmlI	CTYRAG	2 cut(s)	996, 1116
SmoI	CTYRAG	2 cut(s)	996, 1116
Sse9I	AATT	6 cut(s)	392, 698, 833, 990, 1018, 1385
SsiI	CCGC	7 cut(s)	5, 44, 47, 51, 90, 93, 147
SspI	AATATT	2 cut(s)	520, 1072
SspMI	CTAG	3 cut(s)	635, 888, 900
StyD4I	CCNGG	4 cut(s)	206, 473, 976, 1180
StyI	CCWWGG	2 cut(s)	1197, 1269
TaaI	ACNGT	3 cut(s)	18, 847, 1421
TaiI	ACGT	1 cut(s)	1383
TaqI	TCGA	6 cut(s)	11, 288, 732, 952, 1117, 1219
TasI	AATT	6 cut(s)	392, 698, 833, 990, 1018, 1385
TatI	WGTACW	2 cut(s)	418, 1025
TauI	GCSGC	7 cut(s)	8, 47, 50, 53, 93, 96, 149
TfiI	GAWTC	2 cut(s)	949, 956
Tru1I	TTAA	3 cut(s)	1016, 1383, 1397
Tru9I	TTAA	3 cut(s)	1016, 1383, 1397
TseFI	GTSAC	1 cut(s)	788
TseI	GCWGC	9 cut(s)	236, 511, 604, 767, 869, 937, 1031, 1034, 1037
Tsp45I	GTSAC	1 cut(s)	788
TspDTI	ATGAA	7 cut(s)	129, 198, 480, 513, 705, 755, 1336
TspGWI	ACGGA	2 cut(s)	99, 751
VneI	GTGCAC	1 cut(s)	1275
VpaK11BI	GGWCC	5 cut(s)	154, 204, 214, 709, 1046
XagI	CCTNNNNNAGG	1 cut(s)	553
XapI	RAATTY	1 cut(s)	1385
XhoI	CTCGAG	1 cut(s)	1116
XmiI	GTMKAC	1 cut(s)	1336
XspI	CTAG	3 cut(s)	635, 888, 900
Zsp2I	ATGCAT	1 cut(s)	1366

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.