FvH4_1g17780

Signal recognition particle receptor beta subunit

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
10335702 .. 10341197
5496 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g17780.t1

Sequence Viewer

Length: 2565 bp
ATGGAAGCTCTGCAAGGAGCCCACCCTCAAATCCCAAACCCCAAATTCGAACCCAACACTGACCAAATCAAAAGCAGCCTCACCAACAAAGGCTTCCACCCAACTCCCAAAATCGTCCACACTCTCCGCAAGAAGCAACTCCAGAAACACAACCGCAAACTCAACCGCCTCAACCAACAAGACCCACCTCTCTCCGAGTCTCAAAGCCAAGCCCTTTTGGAAGAAACCCACTTCCAAACCCTCAAAGCAGAGTACAGGGGATTCACCAGAGCCGTCAGATCAAAGAATGAATTGACGGTTGGGATGCCTTGGGAGGGTGTGGAGAGAATTGGGTTCAGGGAGCTGGCGAGTGGTGCTGGGGAGTATGGTGGGGAGAAGCTGAAGAGGGAGGAGCTGAACAAGTTGAGGGAAATGTTCGAAACCCGAAAAAGGGAGGAGATGAAATGGGTGTTGGAGGATGATGTGGAGATGAATGAGGAGTGGTTTGATGAGGGGAGTAAGGTTTGGGACCCGCCTAAGAGGCGGCGCAGCGAGAGGGAAGTGGTTGAGTTTCTTGTTGAGAGGCTTAGTGGGACAGAGTTTACAATGAGGGACTGGAAGCTTTCGAGGATGATGAAGCAGTCGGGTTTGGAGTTCAGTGAGGGTCAGGTTCTGAAGGTTCTGAATGGGCTTGCTGCTAAGAAATGTTGGAAGCAGGCATTGGCTGTGGTGGAATGGGTTTATAAGGACAGGGGTAATAAACACTGCAAAAGCAGGTTTGTATACACAAAGCTTTTGGCAATTCTTGGGAAGGCAGGAAGGCCCCAGGAAGCTCTTAACATTTTCAACATGATGCGTGGAGATTGTCATATATATCCAGATATTGCTGCCTATCATAGCATTGCTGTTACACTCGGTCAAACAGGTCGTCTGAAGGAATTACTAAAAGTTATTGAATGCATGAGGCAGAAACCTGTCAAAATAAATAGAAATATGTTTCGCAACTGGGACCCTATCCTTGAACCCGATGTAGTAGTGTATAATGCTATACTGAATGCTTGTGTTCAATCTCATCAGTGGAAGAGTGTATATTGGGTGTTTAACCAGTTGAGAAAGAGTGGTCTGAAACCTAATGGAGCAACTTATGGGCTTGCTATGGAGGTAATGCTGCAATCTGGAAAGTATGACCTCGTGCATGAGTTATTTAGAAAAATGAAAAAAAGCGGAGAAGCTCCGAAAGCTCTTACCTATAAAGTTATTGTTAGAGCTTTATGGTGTGAAGGAAAAGTGAATGAAGCTATTGAAGCAGTCAGGGACATGGAACGAAGGGGAGTGGTTGGGACTAGTGGCGTATATTACGAGTTAGCTTGTTGCCTTTGCAAGAGTGGTAGGTGGCAGGATGCTCTGTTACAGGTTGAGAAGATGAAAAATGTAACTAATACTAAACCTTTGGAGGTCACCTTCACAGGCATGATAAAATCTTCCATGGAGGGTGGACATATTGATGACTGTGTATCCATATTTGAACACATGAAGAACCATTGCAGCCCTAACATAGGGACAATAAATACAATGTTGAAAGTCTTTGGACACACTGATATGTTTTCCAAAGCTAAAGAATTGTTTGAAGAAACTAAGGCTGCTAAATCTGATTCTGACCCTTCGCTGGAAGGTGGTGGTAGTTCTCTTGTGCCCGATGAGTACACATATACCTCAATGCTCAAGGCATCTGCCAGTGCTCTGCAATGGGAATACTTTGAATATGTGTACAAGGAGATGGCTCTCTCAGGATATCAAATAGATCAAAGTAAAAATGCATCAATACTCATGGAAGCATCCAGAGCTGGGAAGGGGTACCTACTAGAGCATGCATTTGACAGAACATTGGAAGCCGGTGAAATCCCCCATCTATTGTTCTTTATTGAAATGGTATATCAAGCAACAGCTCGGCATGATTACAAGAGAGCGGCAACTCTGGTTAATACAATGGCTTATGCCCCATTTCAAGTCAGTGAAAGGCAGTGGACAGATGTTTTTAAGAAAAATGAAGACGGGATCAGTCAGGATGGTTTAAAGAAACTGCTGGATGCTCTAGAGCATTGTGATGTAACATCGGAAGCCACACTCTTAAACTTGAAAAGGTCTTTGCAAAGTCTCTGTTGGTCTTATACATCAAGAGACTTCTCAGATTCTGTATCAGTATCATCTTTAAATGATAATGATGAGGGATCTGACGATAATGAAGGGCTCATTACGCCAAATCATTATTTAGGATATATTAATGGTAAGATGAGTCCTGGCACTGACCCTCCTGATGACAGTAGTGATGCTCCTGTCAATGAATTTCCTCACCGCAGTAGTACCAGGAGAGATGTTGCGGCTGATATAGAGATAGTTTCCAGGCCATTGGATTATATTTCTGATGGAGGACTAGAATCGACAGAAATTGATGAGGAAATCGAAGCACTGATATATAAAGATGATTCTCACAAATCTCATCTGCCCTCAGCAAAGGAAATAATGAAAGATTGGAAGGAACGAAGGAAAAAGGGTGGGATACTCGTTCCCTTTCAACTCGGCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

855

Amino Acids

97.33

Weight (kDa)

6.66

Isoelectric Point (pI)

45.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 333 - 380 8.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 335 - 375 8e-09 PPR repeat family
PPR_long PF17177 339 - 441 7e-07 Pentacotripeptide-repeat region of PRORP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 723
Acc36I ACCTGC 1 cut(s) 744
Acc65I GGTACC 1 cut(s) 1833
AccB1I GGYRCC 1 cut(s) 1833
AccBSI CCGCTC 1 cut(s) 1946
AccI GTMKAC 1 cut(s) 762
AciI CCGC 9 cut(s) 127, 154, 166, 512, 523, 1203, 1946, 2332, 2357
AclWI GGATC 2 cut(s) 2042, 2215
AcsI RAATTY 2 cut(s) 44, 2321
AcuI CTGAAG 3 cut(s) 401, 674, 932
AfaI GTAC 5 cut(s) 254, 1682, 1748, 1835, 2341
AfiI CCNNNNNNNGG 6 cut(s) 314, 429, 430, 1535, 1645, 1824
AhlI ACTAGT 1 cut(s) 1322
AjnI CCWGG 4 cut(s) 804, 2275, 2342, 2378
AjuI GAANNNNNNNTTGG 8 cut(s) 77, 109, 282, 314, 434, 466, 683, 715
Alw21I GWGCWC 1 cut(s) 1720
Alw26I GTCTC 3 cut(s) 204, 2138, 2151
AlwI GGATC 2 cut(s) 2042, 2215
AlwNI CAGNNNCTG 2 cut(s) 652, 2171
AoxI GGCC 2 cut(s) 800, 2381
ApeKI GCWGC 7 cut(s) 75, 528, 674, 866, 1147, 1524, 1619
ApoI RAATTY 2 cut(s) 44, 2321
ArsI GACNNNNNNTTYG 2 cut(s) 892, 924
AseI ATTAAT 1 cut(s) 2259
Asp718I GGTACC 1 cut(s) 1833
AspLEI GCGC 1 cut(s) 528
AspS9I GGNCC 3 cut(s) 508, 801, 988
AsuHPI GGTGA 5 cut(s) 73, 256, 1429, 1886, 2321
AsuII TTCGAA 2 cut(s) 48, 417
AvaII GGWCC 2 cut(s) 508, 988
BaeGI GKGCMC 1 cut(s) 1674
BanI GGYRCC 1 cut(s) 1833
BanII GRGCYC 2 cut(s) 22, 2229
BauI CACGAG 1 cut(s) 1169
BbsI GAAGAC 1 cut(s) 2034
Bbv12I GWGCWC 1 cut(s) 1720
BbvCI CCTCAGC 1 cut(s) 2485
BbvI GCAGC 7 cut(s) 87, 540, 661, 853, 1134, 1536, 1606
BccI CCATC 4 cut(s) 1750, 1893, 2039, 2396
BceAI ACGGC 1 cut(s) 257
BciT130I CCWGG 4 cut(s) 806, 2277, 2344, 2380
BciVI GTATCC 2 cut(s) 1504, 2529
BcoDI GTCTC 3 cut(s) 204, 2138, 2151
BcuI ACTAGT 1 cut(s) 1322
BfaI CTAG 4 cut(s) 1323, 1841, 2072, 2411
BfuAI ACCTGC 1 cut(s) 744
BfuI GTATCC 2 cut(s) 1504, 2529
BglI GCCNNNNNGGC 1 cut(s) 520
Bme1390I CCNGG 4 cut(s) 806, 2277, 2344, 2380
Bme18I GGWCC 2 cut(s) 508, 988
BmgT120I GGNCC 3 cut(s) 508, 801, 988
BmiI GGNNCC 7 cut(s) 19, 509, 510, 803, 989, 990, 1835
BmrFI CCNGG 4 cut(s) 806, 2277, 2344, 2380
BmrI ACTGGG 1 cut(s) 994
BmsI GCATC 8 cut(s) 294, 822, 1369, 1715, 1805, 1823, 2056, 2296
BmuI ACTGGG 1 cut(s) 994
BpiI GAAGAC 1 cut(s) 2034
BpmI CTGGAG 1 cut(s) 125
Bpu10I CCTNAGC 1 cut(s) 2485
Bpu14I TTCGAA 2 cut(s) 48, 417
BpuEI CTTGAG 1 cut(s) 1685
BsaJI CCNNGG 3 cut(s) 308, 804, 1464
BsaXI ACNNNNNCTCC 2 cut(s) 2272, 2302
Bsc4I CCNNNNNNNGG 6 cut(s) 314, 429, 430, 1535, 1645, 1824
Bse118I RCCGGY 1 cut(s) 1871
Bse1I ACTGG 4 cut(s) 599, 989, 1084, 1713
Bse3DI GCAATG 3 cut(s) 879, 1519, 1730
BseBI CCWGG 4 cut(s) 806, 2277, 2344, 2380
BseDI CCNNGG 3 cut(s) 308, 804, 1464
BseGI GGATG 7 cut(s) 309, 463, 615, 1384, 1814, 2050, 2071
BseLI CCNNNNNNNGG 6 cut(s) 314, 429, 430, 1535, 1645, 1824
BseMI GCAATG 3 cut(s) 879, 1519, 1730
BseMII CTCAG 3 cut(s) 1779, 2178, 2499
BseNI ACTGG 4 cut(s) 599, 989, 1084, 1713
BseRI GAGGAG 3 cut(s) 404, 449, 491
BseSI GKGCMC 1 cut(s) 1674
BseXI GCAGC 7 cut(s) 87, 540, 661, 853, 1134, 1536, 1606
BseYI CCCAGC 2 cut(s) 356, 1823
BshFI GGCC 2 cut(s) 802, 2383
BshNI GGYRCC 1 cut(s) 1833
BsiHKAI GWGCWC 1 cut(s) 1720
BsiSI CCGG 1 cut(s) 1872
BslFI GGGAC 7 cut(s) 521, 586, 605, 1001, 1307, 1333, 1552
BslI CCNNNNNNNGG 6 cut(s) 314, 429, 430, 1535, 1645, 1824
BsmAI GTCTC 3 cut(s) 204, 2138, 2151
BsmFI GGGAC 7 cut(s) 521, 586, 605, 1001, 1307, 1333, 1552
BsmI GAATGC 2 cut(s) 941, 1039
BsnI GGCC 2 cut(s) 802, 2383
Bsp119I TTCGAA 2 cut(s) 48, 417
Bsp1286I GDGCHC 4 cut(s) 22, 1674, 1720, 2229
Bsp1407I TGTACA 1 cut(s) 1746
Bsp143I GATC 4 cut(s) 278, 1780, 2034, 2207
Bsp19I CCATGG 1 cut(s) 1464
BspACI CCGC 9 cut(s) 127, 154, 166, 512, 523, 1203, 1946, 2332, 2357
BspANI GGCC 2 cut(s) 802, 2383
BspCNI CTCAG 3 cut(s) 1778, 2177, 2498
BspLI GGNNCC 7 cut(s) 19, 509, 510, 803, 989, 990, 1835
BspMI ACCTGC 1 cut(s) 744
BspPI GGATC 2 cut(s) 2042, 2215
BspT104I TTCGAA 2 cut(s) 48, 417
BspT107I GGYRCC 1 cut(s) 1833
BsrBI CCGCTC 1 cut(s) 1946
BsrDI GCAATG 3 cut(s) 879, 1519, 1730
BsrFI RCCGGY 1 cut(s) 1871
BsrGI TGTACA 1 cut(s) 1746
BsrI ACTGG 4 cut(s) 599, 989, 1084, 1713
BssAI RCCGGY 1 cut(s) 1871
BssECI CCNNGG 3 cut(s) 308, 804, 1464
BssMI GATC 4 cut(s) 278, 1780, 2034, 2207
BssNAI GTATAC 1 cut(s) 763
BssSI CACGAG 1 cut(s) 1169
BssT1I CCWWGG 2 cut(s) 308, 1464
Bst1107I GTATAC 1 cut(s) 763
Bst2BI CACGAG 1 cut(s) 1169
Bst2UI CCWGG 4 cut(s) 806, 2277, 2344, 2380
Bst4CI ACNGT 3 cut(s) 298, 1490, 2300
Bst6I CTCTTC 2 cut(s) 377, 1055
BstAUI TGTACA 1 cut(s) 1746
BstBI TTCGAA 2 cut(s) 48, 417
BstC8I GCNNGC 5 cut(s) 345, 672, 696, 1131, 1848
BstDEI CTNAG 7 cut(s) 516, 566, 678, 1614, 1765, 2164, 2485
BstDSI CCRYGG 1 cut(s) 1464
BstEII GGTNACC 1 cut(s) 1435
BstENI CCTNNNNNAGG 1 cut(s) 1533
BstF5I GGATG 7 cut(s) 309, 463, 615, 1384, 1814, 2050, 2071
BstHHI GCGC 1 cut(s) 528
BstKTI GATC 4 cut(s) 281, 1783, 2037, 2210
BstMAI GTCTC 3 cut(s) 204, 2138, 2151
BstMBI GATC 4 cut(s) 278, 1780, 2034, 2207
BstMWI GCNNNNNNNGC 6 cut(s) 353, 520, 1217, 1283, 1820, 2233
BstNI CCWGG 4 cut(s) 806, 2277, 2344, 2380
BstNSI RCATGY 2 cut(s) 1850, 2563
BstPI GGTNACC 1 cut(s) 1435
BstSCI CCNGG 4 cut(s) 804, 2275, 2342, 2378
BstSLI GKGCMC 1 cut(s) 1674
BstV1I GCAGC 7 cut(s) 87, 540, 661, 853, 1134, 1536, 1606
BstV2I GAAGAC 1 cut(s) 2034
BstX2I RGATCY 1 cut(s) 2207
BstXI CCANNNNNNTGG 1 cut(s) 2386
BstYI RGATCY 1 cut(s) 2207
BstZ17I GTATAC 1 cut(s) 763
BsuI GTATCC 2 cut(s) 1504, 2529
BsuRI GGCC 2 cut(s) 802, 2383
BtgI CCRYGG 1 cut(s) 1464
BtsCI GGATG 7 cut(s) 309, 463, 615, 1384, 1814, 2050, 2071
BtsI GCAGTG 2 cut(s) 742, 2006
BveI ACCTGC 1 cut(s) 744
Cac8I GCNNGC 5 cut(s) 345, 672, 696, 1131, 1848
CaiI CAGNNNCTG 2 cut(s) 652, 2171
CfoI GCGC 1 cut(s) 528
Cfr10I RCCGGY 1 cut(s) 1871
Cfr13I GGNCC 3 cut(s) 508, 801, 988
Csp6I GTAC 5 cut(s) 253, 1681, 1747, 1834, 2340
CviQI GTAC 5 cut(s) 253, 1681, 1747, 1834, 2340
DdeI CTNAG 7 cut(s) 516, 566, 678, 1614, 1765, 2164, 2485
DpnI GATC 4 cut(s) 280, 1782, 2036, 2209
DpnII GATC 4 cut(s) 278, 1780, 2034, 2207
DraI TTTAAA 2 cut(s) 2052, 2190
Eam1104I CTCTTC 2 cut(s) 377, 1055
EarI CTCTTC 2 cut(s) 377, 1055
Eco130I CCWWGG 2 cut(s) 308, 1464
Eco24I GRGCYC 2 cut(s) 22, 2229
Eco32I GATATC 1 cut(s) 1772
Eco47I GGWCC 2 cut(s) 508, 988
Eco57I CTGAAG 3 cut(s) 401, 674, 932
Eco91I GGTNACC 1 cut(s) 1435
EcoNI CCTNNNNNAGG 1 cut(s) 1533
EcoO109I RGGNCCY 3 cut(s) 508, 801, 988
EcoO65I GGTNACC 1 cut(s) 1435
EcoRII CCWGG 4 cut(s) 804, 2275, 2342, 2378
EcoRV GATATC 1 cut(s) 1772
EcoT14I CCWWGG 2 cut(s) 308, 1464
EcoT22I ATGCAT 3 cut(s) 941, 1798, 1852
EcoT38I GRGCYC 2 cut(s) 22, 2229
ErhI CCWWGG 2 cut(s) 308, 1464
FaqI GGGAC 7 cut(s) 521, 586, 605, 1001, 1307, 1333, 1552
FauI CCCGC 1 cut(s) 519
FblI GTMKAC 1 cut(s) 762
FokI GGATG 7 cut(s) 316, 470, 622, 1391, 1801, 2057, 2078
FriOI GRGCYC 2 cut(s) 22, 2229
FspBI CTAG 4 cut(s) 1323, 1841, 2072, 2411
GlaI GCGC 1 cut(s) 527
GsaI CCCAGC 2 cut(s) 360, 1827
GsuI CTGGAG 1 cut(s) 125
HaeIII GGCC 2 cut(s) 802, 2383
HapII CCGG 1 cut(s) 1872
HhaI GCGC 1 cut(s) 528
Hin6I GCGC 1 cut(s) 526
HinP1I GCGC 1 cut(s) 526
HindIII AAGCTT 2 cut(s) 599, 770
HinfI GANTC 7 cut(s) 197, 261, 1631, 2168, 2272, 2414, 2462
HpaII CCGG 1 cut(s) 1872
HphI GGTGA 5 cut(s) 73, 256, 1429, 1886, 2321
Hpy166II GTNNAC 7 cut(s) 118, 582, 763, 1475, 1683, 1747, 2004
Hpy188III TCNNGA 9 cut(s) 142, 857, 1155, 1767, 1818, 2042, 2072, 2154, 2291
Hpy8I GTNNAC 7 cut(s) 118, 582, 763, 1475, 1683, 1747, 2004
HpyCH4III ACNGT 3 cut(s) 298, 1490, 2300
HpyF10VI GCNNNNNNNGC 6 cut(s) 353, 520, 1217, 1283, 1820, 2233
HpyF3I CTNAG 7 cut(s) 516, 566, 678, 1614, 1765, 2164, 2485
HspAI GCGC 1 cut(s) 526
KflI GGGWCCC 2 cut(s) 508, 988
KpnI GGTACC 1 cut(s) 1837
Kzo9I GATC 4 cut(s) 278, 1780, 2034, 2207
LmnI GCTCC 6 cut(s) 17, 340, 391, 1115, 1216, 2314
Lsp1109I GCAGC 7 cut(s) 87, 540, 661, 853, 1134, 1536, 1606
LweI GCATC 8 cut(s) 294, 822, 1369, 1715, 1805, 1823, 2056, 2296
MaeI CTAG 4 cut(s) 1323, 1841, 2072, 2411
MaeIII GTNAC 5 cut(s) 886, 1386, 1411, 1435, 2086
MalI GATC 4 cut(s) 280, 1782, 2036, 2209
MbiI CCGCTC 1 cut(s) 1946
MboI GATC 4 cut(s) 278, 1780, 2034, 2207
MboII GAAGA 8 cut(s) 233, 394, 1072, 1411, 1452, 1525, 1619, 2039
MflI RGATCY 1 cut(s) 2207
MhlI GDGCHC 4 cut(s) 22, 1674, 1720, 2229
MluCI AATT 8 cut(s) 44, 290, 327, 780, 917, 1598, 2321, 2424
MlyI GAGTC 2 cut(s) 206, 2281
MmeI TCCRAC 2 cut(s) 432, 668
Mph1103I ATGCAT 3 cut(s) 941, 1798, 1852
MseI TTAA 8 cut(s) 816, 1080, 1959, 2016, 2051, 2108, 2189, 2259
MslI CAYNNNNRTG 4 cut(s) 1448, 1482, 1577, 2082
MspI CCGG 1 cut(s) 1872
MspR9I CCNGG 4 cut(s) 806, 2277, 2344, 2380
Mva1269I GAATGC 2 cut(s) 941, 1039
MvaI CCWGG 4 cut(s) 806, 2277, 2344, 2380
MwoI GCNNNNNNNGC 6 cut(s) 353, 520, 1217, 1283, 1820, 2233
NcoI CCATGG 1 cut(s) 1464
NdeII GATC 4 cut(s) 278, 1780, 2034, 2207
NlaIV GGNNCC 7 cut(s) 19, 509, 510, 803, 989, 990, 1835
NmeAIII GCCGAG 2 cut(s) 1906, 2535
NmuCI GTSAC 1 cut(s) 1435
NsiI ATGCAT 3 cut(s) 941, 1798, 1852
NspI RCATGY 2 cut(s) 1850, 2563
NspV TTCGAA 2 cut(s) 48, 417
PaeI GCATGC 1 cut(s) 1850
PctI GAATGC 2 cut(s) 941, 1039
PfeI GAWTC 5 cut(s) 261, 1631, 2168, 2414, 2462
PleI GAGTC 2 cut(s) 205, 2280
PpsI GAGTC 2 cut(s) 205, 2280
PpuMI RGGWCCY 2 cut(s) 508, 988
PshBI ATTAAT 1 cut(s) 2259
PsiI TTATAA 1 cut(s) 723
Psp5II RGGWCCY 2 cut(s) 508, 988
Psp6I CCWGG 4 cut(s) 804, 2275, 2342, 2378
PspEI GGTNACC 1 cut(s) 1435
PspFI CCCAGC 2 cut(s) 356, 1823
PspGI CCWGG 4 cut(s) 804, 2275, 2342, 2378
PspN4I GGNNCC 7 cut(s) 19, 509, 510, 803, 989, 990, 1835
PspPI GGNCC 3 cut(s) 508, 801, 988
PspPPI RGGWCCY 2 cut(s) 508, 988
PstNI CAGNNNCTG 2 cut(s) 652, 2171
PsuI RGATCY 1 cut(s) 2207
RsaI GTAC 5 cut(s) 254, 1682, 1748, 1835, 2341
RsaNI GTAC 5 cut(s) 253, 1681, 1747, 1834, 2340
RseI CAYNNNNRTG 4 cut(s) 1448, 1482, 1577, 2082
SaqAI TTAA 8 cut(s) 816, 1080, 1959, 2016, 2051, 2108, 2189, 2259
Sau3AI GATC 4 cut(s) 278, 1780, 2034, 2207
Sau96I GGNCC 3 cut(s) 508, 801, 988
SchI GAGTC 2 cut(s) 206, 2281
ScrFI CCNGG 4 cut(s) 806, 2277, 2344, 2380
SduI GDGCHC 4 cut(s) 22, 1674, 1720, 2229
SfaNI GCATC 8 cut(s) 294, 822, 1369, 1715, 1805, 1823, 2056, 2296
SfuI TTCGAA 2 cut(s) 48, 417
SinI GGWCC 2 cut(s) 508, 988
SmiMI CAYNNNNRTG 4 cut(s) 1448, 1482, 1577, 2082
SmlI CTYRAG 1 cut(s) 1700
SmoI CTYRAG 1 cut(s) 1700
SpeI ACTAGT 1 cut(s) 1322
SphI GCATGC 1 cut(s) 1850
Sse9I AATT 8 cut(s) 44, 290, 327, 780, 917, 1598, 2321, 2424
SsiI CCGC 9 cut(s) 127, 154, 166, 512, 523, 1203, 1946, 2332, 2357
SspMI CTAG 4 cut(s) 1323, 1841, 2072, 2411
StyD4I CCNGG 4 cut(s) 804, 2275, 2342, 2378
StyI CCWWGG 2 cut(s) 308, 1464
TaaI ACNGT 3 cut(s) 298, 1490, 2300
TaqI TCGA 5 cut(s) 48, 417, 605, 2417, 2439
TaqII GACCGA 1 cut(s) 884
TasI AATT 8 cut(s) 44, 290, 327, 780, 917, 1598, 2321, 2424
TatI WGTACW 3 cut(s) 252, 1680, 1746
TauI GCSGC 3 cut(s) 526, 1949, 2360
TfiI GAWTC 5 cut(s) 261, 1631, 2168, 2414, 2462
Tru1I TTAA 8 cut(s) 816, 1080, 1959, 2016, 2051, 2108, 2189, 2259
Tru9I TTAA 8 cut(s) 816, 1080, 1959, 2016, 2051, 2108, 2189, 2259
TseFI GTSAC 1 cut(s) 1435
TseI GCWGC 7 cut(s) 75, 528, 674, 866, 1147, 1524, 1619
Tsp45I GTSAC 1 cut(s) 1435
VpaK11BI GGWCC 2 cut(s) 508, 988
VspI ATTAAT 1 cut(s) 2259
XagI CCTNNNNNAGG 1 cut(s) 1533
XapI RAATTY 2 cut(s) 44, 2321
XbaI TCTAGA 1 cut(s) 2071
XceI RCATGY 2 cut(s) 1850, 2563
XmiI GTMKAC 1 cut(s) 762
XspI CTAG 4 cut(s) 1323, 1841, 2072, 2411
Zsp2I ATGCAT 3 cut(s) 941, 1798, 1852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.