Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0009080

Physical Location & Seq

Genomic Coordinates Reverse (-)

22588784 .. 22595295

Gene Structure 6512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G219900.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGGAAGCTCTGCAAGGATCCCTCCCTCAACTCCCTCATACCAAATTCGAACCAGACACTGATAAAATCAAACGCAGGCTCAACAATGGAGGCGTCTACCCAACTCCCAAGATAGTCCACACCATCCGCAAGAAAGAAATTCAAAAGCACAACCGCAAGCTCAATCGCCTCGCAAAGGCCGACCCGTCGTCCCCACCTCTCTCTCAGTCCCAAAAACAAGCCTTGGCGGACGAAACCCATTTCCAAACTCTCAAGCGCGAGTACAGGGACTTCACCAAAGCTGTCAAAGCGAAGACTGGTGACGGTGAATCCATGGTTGGGCGGCCATGGGAGGGGATTGAGAGAATTGGGTTCCGAGAGCTTGCGAGTACGAGTGCAGAGTATGGTGGAGAGAAGCTGAAAAAGGAGGAGCTGAAAGCATTGAGGGAAATGTTCGAGGCTCGGAAGCTTGAGGACTTGAAATGGGTCTTGGATGATGATATTGAGCTGAAAGAAGACTGGATGGATGGTGAAAATAGGGTCTGGGACCCGGCTAAGCGGAGGAGACGCGGCGAGGGCGAGGTGATTCAGTTTCTTGTTGACAGACTTAGTGCTACAGAGTTTTCCATGAAGGACTGGAAGCTTTCAAAAATGATGAAACAATCAGGGTTGCAGTTCACTGAGGGTCAGATGCTTAAGATTCTTGGAGGGCTCGGTGCTAAGGGATGTTGGAAACATTCGCTGGCTGTTGTGGAATGGGTATACAATGATAAGGGCAATAAACATTGCAAAAGCAGGTTTGTTTACACAAAACTTTTGGCAATTCTTGGGAAGGCACGAAGGCCCCAGGAAGCTCTTCACATTTTCAATCTGATGCTTGTGATGTCTTGTTCTTTTGGAGATTTCCACATATATCCTGATGCTGCTGCCTACCATAGCATTACAGTTACACTTGGTCAAACTGGTCTTCTGAAGGAATTGTTGAAAATTATTGAAAGCATGAGACAGAGACCTTTCAGAAGCAATAAAAATATGTTCCCCAAGAACTGGGACCCTGTCGTTGAACCCGATGTCATTGTGTATAATGCTCTACTGAATGCTTGTACTCAGTCCCATCAGTGGAAGGGTGTATCCTGGGTGTTTAACCAGTTGAGAAAGAGTGGTCTGAAACCTAATGGAGCAACCTATGGACTTGCTATGGAGGTAATGCTGCAATCTGGAAAGTATGACCTTGTGCACGAGCTCTTCAGGAAAATGAAAAACAGCGGTGAAGCTCCAAAAGCTCTTAACTACAAAGTTCTTGTCAGAGCTTTTTGGTGTGAAGGAAAAGTCAACGAAGCTGTGGAAGCAGTTAGAGATATGGAACAAAGGGGAGTGGTTGGAACAGGCAGTGTATATTATGAGTTAGCTTGCTGCCTTTGCAACAATGGTAGGTGGCAGGATGCTCTGGTAGAGGTTGAGAAGATGAAAAATGTATCAAACACTAAACCTTTGGAGGTCACTTTCACGGGCATGATAACGTCTTCCATGGAGGGTGGGCATATTGATAGTTGCATATCTATATTTAAACACATGAAAAACCGTTGTGCCCCCAACATAGGGACCATAAATACAATGCTGAAAGTCTTTGGACGTAGTGATATGTTTTTCAAAGCTAAAGAATTGTTTGAAGAAATCAAGACTGTTAGAGCTGAGTCTGATTTTTCACTAGAAGGTGGTGGTACTTTGGTTGTCCCTGATCAGTACACGTATACGTCAATGCTCAAGGCATCTGCCAGCGCTCTGCAATGGGAATACTTTGAATATGTGTACAAGGAGATGGCTCTATCTGGATATCAAGTAGATCAAACTAAACATGCATCGCTACTTGTGAAAGCATCCAGAAGTGGGAAGTTTTATCTACTAGAGCATGCATTTGACACGAGTTTGGAAGCTGGAGAAATTCCCCATCCATTGATCTTTACTGAAATGGTATTTCAAGCTACAGCTCAACATGATTATAAGAGAGCTGTAACCCTGGTCAATGCCATGGCTTATGCTCCATTTCAAGTCAGCGAAAGACAGTGGACAGACCTTTTCGAGAAAAATGGAGACACAATCACTCAGGATGGCTTAGAGAAACTGTTGGATGCTCTACACAATTGTGATGTAGTATCGGAAGCCACCGTCTTAAATTTATCAAGATCATTGCTTCGTCTTTGTCGGTCTTACAGATCAAGAGGCTTATCAAGTTCCGCCCCTTTTGGCAGTGGAGCCACAGAAACATCATCCTTGGATGGTGATAATGAGGAAATTTATGGTAATGGAATTATGCCAAATCATTCTTTAGAATCGATTGATGGTAGCCATAACCCTAGGAGGGAGCCTCTTGATAAGAGTACCAATGTTCCTTTGGATGCATTTTCTGTTAATCATGCTAGCACCAGAAGAGATGTTGATGAAGTTACAAGGACAGTGTCTAGGTCATCCGAATATATTTCTGATGAAGATGGTGAATACTCAACAGAAATCGATAAGGAAATTGAAGCACTGATTTATAAAGATGTTGATGATTCTCATGACTCAGATTTGCCCTCAGCACCTGAAATACTGAAAGTGTGGAAGGAAAGAAGGAAAGAAGCAAGGGATAGTCTTCCTCTTTCAACTTGGGCAGAAGTAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0018130 GO:0019438 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0042793 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

881

Amino Acids

99.79

Weight (kDa)

6.77

Isoelectric Point (pI)

42.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67570
fragaria_vesca	FvH4_1g17780 FvH4_1g17780 FvH4_1g17780 FvH4_1g17891
malus_domestica	MD02G1186800.v1.1
prunus_persica	Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1
pyrus_communis	pycom02g15180
rosa_chinensis	RchiOBHm_Chr2g0108231
rosa_laevigata	RLG00000017648
rosa_multiflora	Rmu_sc0007406.1_g000010
rosa_roxburghii	Rroxscaffold_2G00135470
rosa_rugosa	Rorug02G0151200
rosa_samantha	Rh2AG199800 Rh2BG212500 Rh2CG204500 Rh2DG207400
rosa_wichuraiana	Rw2G015900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1980, 2517
Acc36I	ACCTGC	1 cut(s)	765
AccB7I	CCANNNNNTGG	1 cut(s)	1026
AccI	GTMKAC	3 cut(s)	96, 741, 1730
AccII	CGCG	2 cut(s)	258, 549
AciI	CCGC	8 cut(s)	127, 154, 227, 322, 538, 549, 1245, 2214
AclWI	GGATC	2 cut(s)	12, 25
AcoI	YGGCCR	1 cut(s)	323
AcsI	RAATTY	5 cut(s)	44, 138, 1920, 2152, 2271
AcuI	CTGAAG	2 cut(s)	971, 1210
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	7 cut(s)	263, 370, 1084, 1702, 1724, 1790, 2359
AfeI	AGCGCT	1 cut(s)	1759
AfiI	CCNNNNNNNGG	9 cut(s)	175, 318, 332, 1026, 1098, 1577, 1578, 1866, 2338
AflII	CTTAAG	1 cut(s)	674
AflIII	ACRYGT	1 cut(s)	1725
AhdI	GACNNNNNGTC	1 cut(s)	187
AjnI	CCWGG	3 cut(s)	825, 1112, 1995
AjuI	GAANNNNNNNTTGG	4 cut(s)	300, 332, 452, 484
AleI	CACNNNNGTG	1 cut(s)	2121
Alw21I	GWGCWC	2 cut(s)	1218, 1224
Alw26I	GTCTC	4 cut(s)	538, 976, 982, 2064
Alw44I	GTGCAC	1 cut(s)	1214
AlwI	GGATC	2 cut(s)	12, 25
AlwNI	CAGNNNCTG	2 cut(s)	59, 2561
Aor51HI	AGCGCT	1 cut(s)	1759
AoxI	GGCC	3 cut(s)	177, 323, 821
ApaLI	GTGCAC	1 cut(s)	1214
ApeKI	GCWGC	4 cut(s)	902, 905, 1189, 1392
ApoI	RAATTY	5 cut(s)	44, 138, 1920, 2152, 2271
ArsI	GACNNNNNNTTYG	2 cut(s)	1266, 1298
Asp700I	GAANNNNTTC	1 cut(s)	834
AspA2I	CCTAGG	1 cut(s)	2333
AspLEI	GCGC	2 cut(s)	258, 1760
AspS9I	GGNCC	4 cut(s)	526, 822, 1030, 1581
AsuC2I	CCSGG	1 cut(s)	530
AsuHPI	GGTGA	8 cut(s)	265, 311, 317, 521, 574, 1259, 2270, 2483
AsuII	TTCGAA	1 cut(s)	48
AsuNHI	GCTAGC	1 cut(s)	2396
AvaII	GGWCC	3 cut(s)	526, 1030, 1581
AvrII	CCTAGG	1 cut(s)	2333
BaeGI	GKGCMC	2 cut(s)	1218, 1570
BaeI	ACNNNNGTAYC	2 cut(s)	1692, 1725
BamHI	GGATCC	1 cut(s)	17
BanII	GRGCYC	2 cut(s)	693, 1224
BarI	GAAGNNNNNNTAC	2 cut(s)	254, 286
BauI	CACGAG	2 cut(s)	1217, 1900
BbsI	GAAGAC	5 cut(s)	299, 501, 938, 1494, 2603
Bbv12I	GWGCWC	2 cut(s)	1218, 1224
BbvCI	CCTCAGC	1 cut(s)	2554
BbvI	GCAGC	4 cut(s)	889, 892, 1176, 1379
BciT130I	CCWGG	3 cut(s)	827, 1114, 1997
BciVI	GTATCC	1 cut(s)	1120
BclI	TGATCA	1 cut(s)	1717
BcnI	CCSGG	1 cut(s)	530
BcoDI	GTCTC	4 cut(s)	538, 976, 982, 2064
BfaI	CTAG	5 cut(s)	1688, 1883, 2334, 2397, 2439
BfmI	CTRYAG	2 cut(s)	594, 1962
BfoI	RGCGCY	1 cut(s)	1761
BfrI	CTTAAG	1 cut(s)	674
BfuAI	ACCTGC	1 cut(s)	765
BfuI	GTATCC	1 cut(s)	1120
BisI	GCNGC	6 cut(s)	323, 550, 903, 906, 1190, 1393
BlnI	CCTAGG	1 cut(s)	2333
BlpI	GCTNAGC	1 cut(s)	534
BlsI	GCNGC	6 cut(s)	324, 551, 904, 907, 1191, 1394
Bme1390I	CCNGG	4 cut(s)	530, 827, 1114, 1997
Bme18I	GGWCC	3 cut(s)	526, 1030, 1581
BmeRI	GACNNNNNGTC	1 cut(s)	187
BmgT120I	GGNCC	4 cut(s)	526, 822, 1030, 1581
BmrFI	CCNGG	4 cut(s)	530, 827, 1114, 1997
BmrI	ACTGGG	1 cut(s)	1036
BmsI	GCATC	9 cut(s)	660, 843, 889, 1411, 1757, 1847, 1865, 2098, 2365
BmtI	GCTAGC	1 cut(s)	2400
BmuI	ACTGGG	1 cut(s)	1036
BpiI	GAAGAC	5 cut(s)	299, 501, 938, 1494, 2603
BplI	GAGNNNNNCTC	2 cut(s)	2329, 2361
BpmI	CTGGAG	1 cut(s)	1935
Bpu10I	CCTNAGC	2 cut(s)	699, 2554
Bpu1102I	GCTNAGC	1 cut(s)	534
Bpu14I	TTCGAA	1 cut(s)	48
BpuEI	CTTGAG	3 cut(s)	236, 470, 1727
BpuMI	CCSGG	1 cut(s)	530
Bsa29I	ATCGAT	2 cut(s)	2312, 2490
BsaAI	YACGTR	1 cut(s)	1728
BsaHI	GRCGYC	1 cut(s)	93
BsaI	GGTCTC	1 cut(s)	982
Bsc4I	CCNNNNNNNGG	9 cut(s)	175, 318, 332, 1026, 1098, 1577, 1578, 1866, 2338
Bse1I	ACTGG	6 cut(s)	301, 503, 620, 946, 1031, 1126
Bse3DI	GCAATG	3 cut(s)	763, 1772, 2165
BseBI	CCWGG	3 cut(s)	827, 1114, 1997
BseCI	ATCGAT	2 cut(s)	2312, 2490
BseLI	CCNNNNNNNGG	9 cut(s)	175, 318, 332, 1026, 1098, 1577, 1578, 1866, 2338
BseMI	GCAATG	3 cut(s)	763, 1772, 2165
BseMII	CTCAG	7 cut(s)	218, 651, 1100, 1662, 2096, 2556, 2568
BseNI	ACTGG	6 cut(s)	301, 503, 620, 946, 1031, 1126
BseRI	GAGGAG	2 cut(s)	422, 556
BseSI	GKGCMC	2 cut(s)	1218, 1570
BseXI	GCAGC	4 cut(s)	889, 892, 1176, 1379
BsgI	GTGCAG	1 cut(s)	396
Bsh1236I	CGCG	2 cut(s)	258, 549
BshFI	GGCC	3 cut(s)	179, 325, 823
BshVI	ATCGAT	2 cut(s)	2312, 2490
BsiHKAI	GWGCWC	2 cut(s)	1218, 1224
BsiSI	CCGG	1 cut(s)	530
BslFI	GGGAC	8 cut(s)	175, 193, 281, 539, 1043, 1075, 1594, 1697
BslI	CCNNNNNNNGG	9 cut(s)	175, 318, 332, 1026, 1098, 1577, 1578, 1866, 2338
BsmAI	GTCTC	4 cut(s)	538, 976, 982, 2064
BsmBI	CGTCTC	1 cut(s)	538
BsmFI	GGGAC	8 cut(s)	175, 193, 281, 539, 1043, 1075, 1594, 1697
BsmI	GAATGC	1 cut(s)	1081
BsnI	GGCC	3 cut(s)	179, 325, 823
Bso31I	GGTCTC	1 cut(s)	982
Bsp119I	TTCGAA	1 cut(s)	48
Bsp1286I	GDGCHC	4 cut(s)	693, 1218, 1224, 1570
Bsp1407I	TGTACA	1 cut(s)	1788
Bsp143I	GATC	6 cut(s)	17, 1717, 1822, 1935, 2162, 2192
Bsp1720I	GCTNAGC	1 cut(s)	534
Bsp19I	CCATGG	4 cut(s)	312, 326, 1506, 2007
BspACI	CCGC	8 cut(s)	127, 154, 227, 322, 538, 549, 1245, 2214
BspANI	GGCC	3 cut(s)	179, 325, 823
BspCNI	CTCAG	7 cut(s)	217, 652, 1099, 1663, 2095, 2555, 2567
BspDI	ATCGAT	2 cut(s)	2312, 2490
BspFNI	CGCG	2 cut(s)	258, 549
BspHI	TCATGA	1 cut(s)	2536
BspMI	ACCTGC	1 cut(s)	765
BspOI	GCTAGC	1 cut(s)	2400
BspPI	GGATC	2 cut(s)	12, 25
BspQI	GCTCTTC	2 cut(s)	840, 1229
BspT104I	TTCGAA	1 cut(s)	48
BspTI	CTTAAG	1 cut(s)	674
BspTNI	GGTCTC	1 cut(s)	982
BsrDI	GCAATG	3 cut(s)	763, 1772, 2165
BsrGI	TGTACA	1 cut(s)	1788
BsrI	ACTGG	6 cut(s)	301, 503, 620, 946, 1031, 1126
BssMI	GATC	6 cut(s)	17, 1717, 1822, 1935, 2162, 2192
BssNAI	GTATAC	2 cut(s)	742, 1731
BssNI	GRCGYC	1 cut(s)	93
BssSI	CACGAG	2 cut(s)	1217, 1900
BssT1I	CCWWGG	7 cut(s)	222, 312, 326, 1506, 2007, 2250, 2333
Bst1107I	GTATAC	2 cut(s)	742, 1731
Bst2BI	CACGAG	2 cut(s)	1217, 1900
Bst2UI	CCWGG	3 cut(s)	827, 1114, 1997
Bst4CI	ACNGT	8 cut(s)	305, 925, 1562, 1663, 2043, 2103, 2146, 2434
Bst6I	CTCTTC	3 cut(s)	840, 1229, 2401
BstACI	GRCGYC	1 cut(s)	93
BstAFI	CTTAAG	1 cut(s)	674
BstAUI	TGTACA	1 cut(s)	1788
BstBAI	YACGTR	1 cut(s)	1728
BstBI	TTCGAA	1 cut(s)	48
BstC8I	GCNNGC	8 cut(s)	77, 158, 363, 723, 1390, 1756, 1890, 2398
BstDSI	CCRYGG	4 cut(s)	312, 326, 1506, 2007
BstENI	CCTNNNNNAGG	1 cut(s)	173
BstFNI	CGCG	2 cut(s)	258, 549
BstH2I	RGCGCY	1 cut(s)	1761
BstHHI	GCGC	2 cut(s)	258, 1760
BstKTI	GATC	6 cut(s)	20, 1720, 1825, 1938, 2165, 2195
BstMAI	GTCTC	4 cut(s)	538, 976, 982, 2064
BstMBI	GATC	6 cut(s)	17, 1717, 1822, 1935, 2162, 2192
BstMWI	GCNNNNNNNGC	5 cut(s)	287, 555, 1259, 1325, 1398
BstNI	CCWGG	3 cut(s)	827, 1114, 1997
BstNSI	RCATGY	2 cut(s)	1838, 1892
BstSCI	CCNGG	4 cut(s)	528, 825, 1112, 1995
BstSFI	CTRYAG	2 cut(s)	594, 1962
BstSLI	GKGCMC	2 cut(s)	1218, 1570
BstUI	CGCG	2 cut(s)	258, 549
BstV1I	GCAGC	4 cut(s)	889, 892, 1176, 1379
BstV2I	GAAGAC	5 cut(s)	299, 501, 938, 1494, 2603
BstX2I	RGATCY	1 cut(s)	17
BstYI	RGATCY	1 cut(s)	17
BstZ17I	GTATAC	2 cut(s)	742, 1731
Bsu15I	ATCGAT	2 cut(s)	2312, 2490
BsuI	GTATCC	1 cut(s)	1120
BsuRI	GGCC	3 cut(s)	179, 325, 823
BsuTUI	ATCGAT	2 cut(s)	2312, 2490
BtgI	CCRYGG	4 cut(s)	312, 326, 1506, 2007
BtgZI	GCGATG	1 cut(s)	1824
BtsI	GCAGTG	2 cut(s)	1375, 2233
BtsIMutI	CAGTG	8 cut(s)	57, 657, 1103, 1375, 2048, 2233, 2439, 2507
BveI	ACCTGC	1 cut(s)	765
Cac8I	GCNNGC	8 cut(s)	77, 158, 363, 723, 1390, 1756, 1890, 2398
CaiI	CAGNNNCTG	2 cut(s)	59, 2561
CciI	TCATGA	1 cut(s)	2536
CfoI	GCGC	2 cut(s)	258, 1760
Cfr13I	GGNCC	4 cut(s)	526, 822, 1030, 1581
ClaI	ATCGAT	2 cut(s)	2312, 2490
CseI	GACGC	2 cut(s)	82, 555
Csp6I	GTAC	7 cut(s)	262, 369, 1083, 1701, 1723, 1789, 2358
CviQI	GTAC	7 cut(s)	262, 369, 1083, 1701, 1723, 1789, 2358
DpnI	GATC	6 cut(s)	19, 1719, 1824, 1937, 2164, 2194
DpnII	GATC	6 cut(s)	17, 1717, 1822, 1935, 2162, 2192
DraI	TTTAAA	1 cut(s)	1546
DriI	GACNNNNNGTC	1 cut(s)	187
EaeI	YGGCCR	1 cut(s)	323
Eam1104I	CTCTTC	3 cut(s)	840, 1229, 2401
Eam1105I	GACNNNNNGTC	1 cut(s)	187
EarI	CTCTTC	3 cut(s)	840, 1229, 2401
EciI	GGCGGA	2 cut(s)	242, 2203
Ecl136II	GAGCTC	1 cut(s)	1222
Eco130I	CCWWGG	7 cut(s)	222, 312, 326, 1506, 2007, 2250, 2333
Eco24I	GRGCYC	2 cut(s)	693, 1224
Eco31I	GGTCTC	1 cut(s)	982
Eco32I	GATATC	1 cut(s)	1814
Eco47I	GGWCC	3 cut(s)	526, 1030, 1581
Eco47III	AGCGCT	1 cut(s)	1759
Eco53kI	GAGCTC	1 cut(s)	1222
Eco57I	CTGAAG	2 cut(s)	971, 1210
EcoICRI	GAGCTC	1 cut(s)	1222
EcoNI	CCTNNNNNAGG	1 cut(s)	173
EcoO109I	RGGNCCY	3 cut(s)	526, 822, 1030
EcoRII	CCWGG	3 cut(s)	825, 1112, 1995
EcoRV	GATATC	1 cut(s)	1814
EcoT14I	CCWWGG	7 cut(s)	222, 312, 326, 1506, 2007, 2250, 2333
EcoT22I	ATGCAT	3 cut(s)	1840, 1894, 2380
EcoT38I	GRGCYC	2 cut(s)	693, 1224
ErhI	CCWWGG	7 cut(s)	222, 312, 326, 1506, 2007, 2250, 2333
Esp3I	CGTCTC	1 cut(s)	538
FaqI	GGGAC	8 cut(s)	175, 193, 281, 539, 1043, 1075, 1594, 1697
FbaI	TGATCA	1 cut(s)	1717
FblI	GTMKAC	3 cut(s)	96, 741, 1730
Fnu4HI	GCNGC	6 cut(s)	323, 550, 903, 906, 1190, 1393
FriOI	GRGCYC	2 cut(s)	693, 1224
Fsp4HI	GCNGC	6 cut(s)	323, 550, 903, 906, 1190, 1393
FspBI	CTAG	5 cut(s)	1688, 1883, 2334, 2397, 2439
GlaI	GCGC	2 cut(s)	257, 1759
GluI	GCNGC	6 cut(s)	323, 550, 903, 906, 1190, 1393
GsuI	CTGGAG	1 cut(s)	1935
HaeII	RGCGCY	1 cut(s)	1761
HaeIII	GGCC	3 cut(s)	179, 325, 823
HapII	CCGG	1 cut(s)	530
HgaI	GACGC	2 cut(s)	82, 555
HhaI	GCGC	2 cut(s)	258, 1760
Hin1I	GRCGYC	1 cut(s)	93
Hin6I	GCGC	2 cut(s)	256, 1758
HinP1I	GCGC	2 cut(s)	256, 1758
HincII	GTYRAC	2 cut(s)	580, 1312
HindII	GTYRAC	2 cut(s)	580, 1312
HindIII	AAGCTT	2 cut(s)	446, 620
HinfI	GANTC	7 cut(s)	308, 565, 679, 1673, 2309, 2531, 2540
HpaII	CCGG	1 cut(s)	530
HphI	GGTGA	8 cut(s)	265, 311, 317, 521, 574, 1259, 2270, 2483
Hpy99I	CGWCG	1 cut(s)	190
HpyAV	CCTTC	9 cut(s)	604, 805, 813, 946, 1096, 1295, 1685, 2575, 2583
HpyCH4III	ACNGT	8 cut(s)	305, 925, 1562, 1663, 2043, 2103, 2146, 2434
HpyCH4IV	ACGT	4 cut(s)	1499, 1612, 1727, 1733
HpyF10VI	GCNNNNNNNGC	5 cut(s)	287, 555, 1259, 1325, 1398
HpySE526I	ACGT	4 cut(s)	1499, 1612, 1727, 1733
Hsp92I	GRCGYC	1 cut(s)	93
HspAI	GCGC	2 cut(s)	256, 1758
KflI	GGGWCCC	2 cut(s)	526, 1030
Ksp22I	TGATCA	1 cut(s)	1717
Kzo9I	GATC	6 cut(s)	17, 1717, 1822, 1935, 2162, 2192
LguI	GCTCTTC	2 cut(s)	840, 1229
LmnI	GCTCC	6 cut(s)	409, 1157, 1258, 2023, 2231, 2341
Lsp1109I	GCAGC	4 cut(s)	889, 892, 1176, 1379
LweI	GCATC	9 cut(s)	660, 843, 889, 1411, 1757, 1847, 1865, 2098, 2365
MaeI	CTAG	5 cut(s)	1688, 1883, 2334, 2397, 2439
MaeII	ACGT	4 cut(s)	1499, 1612, 1727, 1733
MaeIII	GTNAC	5 cut(s)	299, 925, 1477, 1990, 2422
MalI	GATC	6 cut(s)	19, 1719, 1824, 1937, 2164, 2194
MboI	GATC	6 cut(s)	17, 1717, 1822, 1935, 2162, 2192
MfeI	CAATTG	1 cut(s)	2119
MflI	RGATCY	1 cut(s)	17
MhlI	GDGCHC	4 cut(s)	693, 1218, 1224, 1570
MlyI	GAGTC	2 cut(s)	1682, 2534
MmeI	TCCRAC	3 cut(s)	689, 1339, 2085
Mph1103I	ATGCAT	3 cut(s)	1840, 1894, 2380
MroXI	GAANNNNTTC	1 cut(s)	834
MseI	TTAA	6 cut(s)	675, 1122, 1266, 1545, 2150, 2388
MslI	CAYNNNNRTG	2 cut(s)	1490, 2121
MspA1I	CMGCKG	1 cut(s)	1245
MspCI	CTTAAG	1 cut(s)	674
MspI	CCGG	1 cut(s)	530
MspR9I	CCNGG	4 cut(s)	530, 827, 1114, 1997
MunI	CAATTG	1 cut(s)	2119
Mva1269I	GAATGC	1 cut(s)	1081
MvaI	CCWGG	3 cut(s)	827, 1114, 1997
MvnI	CGCG	2 cut(s)	258, 549
MwoI	GCNNNNNNNGC	5 cut(s)	287, 555, 1259, 1325, 1398
NciI	CCSGG	1 cut(s)	530
NcoI	CCATGG	4 cut(s)	312, 326, 1506, 2007
NdeII	GATC	6 cut(s)	17, 1717, 1822, 1935, 2162, 2192
NheI	GCTAGC	1 cut(s)	2396
NmuCI	GTSAC	2 cut(s)	299, 1477
NsiI	ATGCAT	3 cut(s)	1840, 1894, 2380
NspI	RCATGY	2 cut(s)	1838, 1892
NspV	TTCGAA	1 cut(s)	48
OliI	CACNNNNGTG	1 cut(s)	2121
PaeI	GCATGC	1 cut(s)	1892
PagI	TCATGA	1 cut(s)	2536
PciSI	GCTCTTC	2 cut(s)	840, 1229
PcsI	WCGNNNNNNNCGW	2 cut(s)	177, 1044
PctI	GAATGC	1 cut(s)	1081
PdmI	GAANNNNTTC	1 cut(s)	834
PfeI	GAWTC	5 cut(s)	308, 565, 679, 2309, 2531
PflFI	GACNNNGTC	2 cut(s)	1034, 2434
PflMI	CCANNNNNTGG	1 cut(s)	1026
PkrI	GCNGC	6 cut(s)	324, 551, 904, 907, 1191, 1394
PleI	GAGTC	2 cut(s)	1681, 2534
PpsI	GAGTC	2 cut(s)	1681, 2534
Ppu21I	YACGTR	1 cut(s)	1728
PpuMI	RGGWCCY	2 cut(s)	526, 1030
PsiI	TTATAA	2 cut(s)	1980, 2517
Psp124BI	GAGCTC	1 cut(s)	1224
Psp5II	RGGWCCY	2 cut(s)	526, 1030
Psp6I	CCWGG	3 cut(s)	825, 1112, 1995
PspGI	CCWGG	3 cut(s)	825, 1112, 1995
PspPI	GGNCC	4 cut(s)	526, 822, 1030, 1581
PspPPI	RGGWCCY	2 cut(s)	526, 1030
PstNI	CAGNNNCTG	2 cut(s)	59, 2561
PsuI	RGATCY	1 cut(s)	17
PsyI	GACNNNGTC	2 cut(s)	1034, 2434
RsaI	GTAC	7 cut(s)	263, 370, 1084, 1702, 1724, 1790, 2359
RsaNI	GTAC	7 cut(s)	262, 369, 1083, 1701, 1723, 1789, 2358
RseI	CAYNNNNRTG	2 cut(s)	1490, 2121
SacI	GAGCTC	1 cut(s)	1224
SapI	GCTCTTC	2 cut(s)	840, 1229
SaqAI	TTAA	6 cut(s)	675, 1122, 1266, 1545, 2150, 2388
SatI	GCNGC	6 cut(s)	323, 550, 903, 906, 1190, 1393
Sau3AI	GATC	6 cut(s)	17, 1717, 1822, 1935, 2162, 2192
Sau96I	GGNCC	4 cut(s)	526, 822, 1030, 1581
SchI	GAGTC	2 cut(s)	1682, 2534
ScrFI	CCNGG	4 cut(s)	530, 827, 1114, 1997
SduI	GDGCHC	4 cut(s)	693, 1218, 1224, 1570
SfaNI	GCATC	9 cut(s)	660, 843, 889, 1411, 1757, 1847, 1865, 2098, 2365
SfcI	CTRYAG	2 cut(s)	594, 1962
SfuI	TTCGAA	1 cut(s)	48
SinI	GGWCC	3 cut(s)	526, 1030, 1581
SmiMI	CAYNNNNRTG	2 cut(s)	1490, 2121
SmlI	CTYRAG	4 cut(s)	251, 449, 674, 1742
SmoI	CTYRAG	4 cut(s)	251, 449, 674, 1742
SphI	GCATGC	1 cut(s)	1892
SsiI	CCGC	8 cut(s)	127, 154, 227, 322, 538, 549, 1245, 2214
SspMI	CTAG	5 cut(s)	1688, 1883, 2334, 2397, 2439
SstI	GAGCTC	1 cut(s)	1224
StyD4I	CCNGG	4 cut(s)	528, 825, 1112, 1995
StyI	CCWWGG	7 cut(s)	222, 312, 326, 1506, 2007, 2250, 2333
TaaI	ACNGT	8 cut(s)	305, 925, 1562, 1663, 2043, 2103, 2146, 2434
TaiI	ACGT	4 cut(s)	1502, 1615, 1730, 1736
TaqI	TCGA	5 cut(s)	48, 435, 2058, 2312, 2490
TaqII	GACCGA	1 cut(s)	2172
TatI	WGTACW	4 cut(s)	261, 1082, 1722, 1788
TauI	GCSGC	2 cut(s)	325, 552
TfiI	GAWTC	5 cut(s)	308, 565, 679, 2309, 2531
Tru1I	TTAA	6 cut(s)	675, 1122, 1266, 1545, 2150, 2388
Tru9I	TTAA	6 cut(s)	675, 1122, 1266, 1545, 2150, 2388
TscAI	CASTG	8 cut(s)	64, 664, 1103, 1375, 2048, 2233, 2439, 2514
TseFI	GTSAC	2 cut(s)	299, 1477
TseI	GCWGC	4 cut(s)	902, 905, 1189, 1392
Tsp45I	GTSAC	2 cut(s)	299, 1477
TspDTI	ATGAA	7 cut(s)	623, 650, 1250, 1460, 1568, 2433, 2478
TspRI	CASTG	8 cut(s)	64, 664, 1103, 1375, 2048, 2233, 2439, 2514
Tth111I	GACNNNGTC	2 cut(s)	1034, 2434
Van91I	CCANNNNNTGG	1 cut(s)	1026
Vha464I	CTTAAG	1 cut(s)	674
VneI	GTGCAC	1 cut(s)	1214
VpaK11BI	GGWCC	3 cut(s)	526, 1030, 1581
XagI	CCTNNNNNAGG	1 cut(s)	173
XapI	RAATTY	5 cut(s)	44, 138, 1920, 2152, 2271
XceI	RCATGY	2 cut(s)	1838, 1892
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2368
XmaJI	CCTAGG	1 cut(s)	2333
XmiI	GTMKAC	3 cut(s)	96, 741, 1730
XmnI	GAANNNNTTC	1 cut(s)	834
XspI	CTAG	5 cut(s)	1688, 1883, 2334, 2397, 2439
Zsp2I	ATGCAT	3 cut(s)	1840, 1894, 2380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.