Rw2G015900

Signal recognition particle receptor beta subunit

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
18585137 .. 18589686
4550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G015900.1

Sequence Viewer

Length: 2580 bp
ATGGAAGCTCTGCAAGGATCCCTCCCTCAAATCACAAACCCCCAATTCGAACCCAACACTGATAAAATCAAACGCAACCTCACCAACAAAGGCGTCCACCCAACTCCCAAAATCGTCCACACTCTCCGCAAGAAACAAATCCAAAAACACAACCGCAAACTCAACCGCCTCAACGAACAAGACCCACCTCTCTCCGAGTCCCAAAGCCAAGCCCTTTCCGAAGAAACCCATTTCCAAACCCTGAAAGCCGAGTACAGAAGCTTCACCAGAGCCGTGAAATCAAAGAATGGTGGCGGTGAATTGACGGTTGGGATGCCTTGGGAGAGAGTGGAGAGAATTGGGTTCCGGGAGCTGGCGAGTAGTAGCGGTGAGTATGGTGGAGAGAAGCTGAAGAAGGAGGAGTTTAATGCATTGAGGGAAATGTTCGAAACCCGAAAAAGGGAGGAGCTGAAATGGGTGTTGGATGATCATGTGGAGATAAAAGAGGAGTGGTTTGATGGTGAGAATAGGGTGTCGGACCCGACGAAGAGGCGGCGCGGCGAGGGGGAGGTGATTCAGTTTCTTGTTGAGAGGCTTAGTGGTACTGAGTTTACAATGAGGGACTGGAAGCTTTCGAGGATGATGAAGCAGTCAGGTTTGGAGTTCACTGAGGGTCAGGTTTTGAAGATTTTGAATGGGCTTGGTGCTAAGAAATGTTGGAAGCAGGCATTGTCTGTGGTGGAATGGGTTTATAAGGACAGGGGTAATAAACACTGCAAAAGCAGGTTTGTATACACGAAACTTTTGGCAATTCTTGGGAAGGCACGAAGGCCCCAGGAAGCTCTTGACATTTTCAACATGATGCGGGGAGATTGTCATATGTATCCGGATATTGCTGCCTATCATTGCATTGCTGTTACACTCGGTCAAACGGGTCGTCTGAAGGAATTGCTGAAAGTTATTGAATGCATGAGGCAGAAACCTGTCAAAATAGCTAGAAATATGTTTCGTAACTGGGACCCCGTCCTTGAACCCAATGTAGTTGTATATAATGCTATACTGAACGCTTGTGTTCAATCCCGTCAGTGGAAGAGTGTATATTGGGTGTTCAACCAGTTGAGAAAGAGTGGTCTGAAACCTAATGGAGCAACGTATGGGCTTGCTATGGAGGTAATGCTGCAGTCTGGAAAGTTTGACCTCGTGCATGAATTATTTAGAAAAATGAAAAAAAGCGGAGAAGCTCCAAAAGCTCTTACCTATAAAGTTATTGTTAGAGCTTTATGGTGTGAAGGAAAAGTGAATGAAGCTGTGGAAGCAGTCAGGGACATGGAACGAAGAGGAGTGGTTGGGACAAGTGGTGTATATTACGAGTTAGCTTGCTGCCTTTGCAAGAGTGGTAGGTGGCAGGATGCTCTGTTACAGGTTGAGAAGATGAAACATGTATCTAATACTAAACCTTTGGAGGTCACCTTCACAGGCATGATAAGGTCTTCCATGGAGGGTGGACATATTGATGACTGTATATCCACATTTGAACACATGAAGAACCATTGCACCCCTAACATAGGGACAATAAATATGATGTTGAAAGTATTTGGACGCACCGATATGTTTTCCAAAGCTAAAGAATTGTTTGAAGAAACTAAGGCTGCAAAATCTGATTATGACCCTTCACTGGAAGGTGGTGGTAGTTCTCTTGTGCCCGATGAGTACACATATACCTCAATGCTCAAGGCTTCTGCCAGTGCTCTGCAATGGGAATACTTTGAATACGTGTACAAGGAGATGGCTCTCTCAGGATATAAAATAGATCAAAGTAAAAATGCATCAATACTCGTGGAAGCATCCAGATCTGGGAAGGGGTATCTACTAGAGCATGCATTTGACACCACATTGGAAGCCGGTGAAATTCCCCATCAATTGTTCTTTATTGATATGGTATATCAAGCTACAGCTCGACATGATTACAAGAGAGCGGCAACTCTGGTTAATACAATGGCTTATGCCCCATTTCAAGTCAGCGAAAGGCAGTGGACAGATGTTTTTGAGAAAAATGAAGACGGGATCAGTCAGGATGGTTTAACGAAACTGCTGGATGCTCTACAGCACTGTGATGTTACATCGGAAGCCACGCTCTTAAACTTAAAAAGATCTCTGCAAAGTCTCTGCCGGTCGTATACATCGAGAGACTTCTCAAATTCTAAGGCAGTATCATCTTTGGATGATAATGATGAGGGATTTGATGATAATGAAGGGCTCATCATGCCAAATCATTCTTTAGAATATATTGATGGTAAGCCCAAGCCTGGCACTGCTCCTCCTGATGACAGTAGTGATGCTCCTTTCAGTGAATTTCCTCATCGAAATAGTACCCAAAGAGGTGTTGCCGCTGATATAGAGACACCTTGCAGGCCTTTGGATTATATTTCTGATGAAGATGGACTAGAATCGACAGAAATCGATGAGGAAATCGAAGCACTGATAAGTAAGGATGATTCTCACGAATCTCATTCGCCCTCAGCAAAGGAAATAATGAAAGATTGGAAGGAAAGAAGGAAAAAGCATGGGATACTCATGCCCTTTCAACTCGGCCAAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

859

Amino Acids

97.95

Weight (kDa)

6.91

Isoelectric Point (pI)

43.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 336 - 383 1.4e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 338 - 378 4.4e-09 PPR repeat family
PPR_long PF17177 338 - 444 1e-07 Pentacotripeptide-repeat region of PRORP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 732
Acc36I ACCTGC 1 cut(s) 753
AccBSI CCGCTC 1 cut(s) 1955
AccI GTMKAC 2 cut(s) 771, 2156
AccII CGCG 1 cut(s) 537
AccIII TCCGGA 1 cut(s) 865
AclWI GGATC 3 cut(s) 12, 25, 2051
AcoI YGGCCR 1 cut(s) 2569
AcsI RAATTY 3 cut(s) 1887, 2176, 2330
AcuI CTGAAG 2 cut(s) 410, 941
AcyI GRCGYC 1 cut(s) 93
AfaI GTAC 5 cut(s) 254, 583, 1691, 1757, 2350
AfiI CCNNNNNNNGG 8 cut(s) 352, 438, 439, 1065, 1544, 1654, 1833, 2285
AflIII ACRYGT 2 cut(s) 1417, 1752
AjnI CCWGG 2 cut(s) 813, 2284
AjuI GAANNNNNNNTTGG 4 cut(s) 291, 323, 443, 475
Alw21I GWGCWC 1 cut(s) 1729
Alw26I GTCTC 3 cut(s) 2147, 2160, 2372
AlwI GGATC 3 cut(s) 12, 25, 2051
Aor13HI TCCGGA 1 cut(s) 865
AoxI GGCC 3 cut(s) 809, 2390, 2569
ApeKI GCWGC 4 cut(s) 875, 1156, 1359, 1628
ApoI RAATTY 3 cut(s) 1887, 2176, 2330
ArsI GACNNNNNNTTYG 2 cut(s) 901, 933
AspLEI GCGC 1 cut(s) 537
AspS9I GGNCC 3 cut(s) 517, 810, 997
AsuC2I CCSGG 1 cut(s) 347
AsuHPI GGTGA 8 cut(s) 73, 256, 308, 380, 512, 562, 1438, 1895
AsuII TTCGAA 2 cut(s) 48, 426
AvaII GGWCC 2 cut(s) 517, 997
BaeGI GKGCMC 1 cut(s) 1683
BamHI GGATCC 1 cut(s) 17
BanII GRGCYC 1 cut(s) 2238
BarI GAAGNNNNNNTAC 2 cut(s) 245, 277
BauI CACGAG 2 cut(s) 1178, 1814
BbsI GAAGAC 2 cut(s) 1461, 2043
Bbv12I GWGCWC 1 cut(s) 1729
BbvCI CCTCAGC 1 cut(s) 2497
BbvI GCAGC 4 cut(s) 862, 1143, 1346, 1615
BccI CCATC 6 cut(s) 491, 1759, 1902, 2048, 2264, 2411
BceAI ACGGC 1 cut(s) 257
BciT130I CCWGG 2 cut(s) 815, 2286
BciVI GTATCC 2 cut(s) 873, 2541
BclI TGATCA 1 cut(s) 466
BcnI CCSGG 1 cut(s) 347
BcoDI GTCTC 3 cut(s) 2147, 2160, 2372
BfaI CTAG 3 cut(s) 975, 1850, 2423
BfmI CTRYAG 3 cut(s) 1157, 1929, 2081
BfuAI ACCTGC 1 cut(s) 753
BfuI GTATCC 2 cut(s) 873, 2541
BglII AGATCT 2 cut(s) 1829, 2129
BisI GCNGC 8 cut(s) 533, 538, 876, 1157, 1360, 1629, 1956, 2367
BlsI GCNGC 8 cut(s) 534, 539, 877, 1158, 1361, 1630, 1957, 2368
Bme1390I CCNGG 3 cut(s) 347, 815, 2286
Bme18I GGWCC 2 cut(s) 517, 997
BmgT120I GGNCC 3 cut(s) 517, 810, 997
BmiI GGNNCC 6 cut(s) 19, 344, 519, 812, 998, 999
BmrFI CCNGG 3 cut(s) 347, 815, 2286
BmrI ACTGGG 1 cut(s) 1003
BmsI GCATC 7 cut(s) 303, 831, 1378, 1814, 1832, 2065, 2305
BmuI ACTGGG 1 cut(s) 1003
BpiI GAAGAC 2 cut(s) 1461, 2043
Bpu10I CCTNAGC 1 cut(s) 2497
Bpu14I TTCGAA 2 cut(s) 48, 426
BpuEI CTTGAG 1 cut(s) 1694
BpuMI CCSGG 1 cut(s) 347
Bsa29I ATCGAT 1 cut(s) 2439
BsaAI YACGTR 1 cut(s) 1753
BsaHI GRCGYC 1 cut(s) 93
BsaJI CCNNGG 3 cut(s) 317, 813, 1473
BsaWI WCCGGW 1 cut(s) 865
BsaXI ACNNNNNCTCC 2 cut(s) 2281, 2311
Bsc4I CCNNNNNNNGG 8 cut(s) 352, 438, 439, 1065, 1544, 1654, 1833, 2285
Bse118I RCCGGY 2 cut(s) 1880, 2148
Bse1I ACTGG 5 cut(s) 608, 998, 1093, 1659, 1722
Bse3DI GCAATG 4 cut(s) 883, 888, 1528, 1739
BseAI TCCGGA 1 cut(s) 865
BseBI CCWGG 2 cut(s) 815, 2286
BseCI ATCGAT 1 cut(s) 2439
BseDI CCNNGG 3 cut(s) 317, 813, 1473
BseGI GGATG 9 cut(s) 318, 469, 624, 1393, 1823, 2059, 2080, 2206, 2476
BseLI CCNNNNNNNGG 8 cut(s) 352, 438, 439, 1065, 1544, 1654, 1833, 2285
BseMI GCAATG 4 cut(s) 883, 888, 1528, 1739
BseMII CTCAG 4 cut(s) 576, 639, 1788, 2511
BseNI ACTGG 5 cut(s) 608, 998, 1093, 1659, 1722
BseRI GAGGAG 5 cut(s) 413, 458, 500, 1332, 2286
BseSI GKGCMC 1 cut(s) 1683
BseXI GCAGC 4 cut(s) 862, 1143, 1346, 1615
Bsh1236I CGCG 1 cut(s) 537
Bsh1285I CGRYCG 1 cut(s) 2153
BshFI GGCC 3 cut(s) 811, 2392, 2571
BshVI ATCGAT 1 cut(s) 2439
BsiEI CGRYCG 1 cut(s) 2153
BsiHKAI GWGCWC 1 cut(s) 1729
BsiSI CCGG 4 cut(s) 346, 866, 1881, 2149
BslFI GGGAC 6 cut(s) 184, 614, 1010, 1316, 1342, 1561
BslI CCNNNNNNNGG 8 cut(s) 352, 438, 439, 1065, 1544, 1654, 1833, 2285
BsmAI GTCTC 3 cut(s) 2147, 2160, 2372
BsmFI GGGAC 6 cut(s) 184, 614, 1010, 1316, 1342, 1561
BsmI GAATGC 1 cut(s) 950
BsnI GGCC 3 cut(s) 811, 2392, 2571
Bsp119I TTCGAA 2 cut(s) 48, 426
Bsp1286I GDGCHC 3 cut(s) 1683, 1729, 2238
Bsp13I TCCGGA 1 cut(s) 865
Bsp1407I TGTACA 1 cut(s) 1755
Bsp143I GATC 6 cut(s) 17, 466, 1789, 1829, 2043, 2129
Bsp19I CCATGG 1 cut(s) 1473
BspANI GGCC 3 cut(s) 811, 2392, 2571
BspCNI CTCAG 4 cut(s) 577, 640, 1787, 2510
BspDI ATCGAT 1 cut(s) 2439
BspEI TCCGGA 1 cut(s) 865
BspFNI CGCG 1 cut(s) 537
BspLI GGNNCC 6 cut(s) 19, 344, 519, 812, 998, 999
BspMAI CTGCAG 1 cut(s) 1161
BspMI ACCTGC 1 cut(s) 753
BspPI GGATC 3 cut(s) 12, 25, 2051
BspT104I TTCGAA 2 cut(s) 48, 426
BsrBI CCGCTC 1 cut(s) 1955
BsrDI GCAATG 4 cut(s) 883, 888, 1528, 1739
BsrFI RCCGGY 2 cut(s) 1880, 2148
BsrGI TGTACA 1 cut(s) 1755
BsrI ACTGG 5 cut(s) 608, 998, 1093, 1659, 1722
BssAI RCCGGY 2 cut(s) 1880, 2148
BssECI CCNNGG 3 cut(s) 317, 813, 1473
BssMI GATC 6 cut(s) 17, 466, 1789, 1829, 2043, 2129
BssNAI GTATAC 2 cut(s) 772, 2157
BssNI GRCGYC 1 cut(s) 93
BssSI CACGAG 2 cut(s) 1178, 1814
BssT1I CCWWGG 2 cut(s) 317, 1473
Bst1107I GTATAC 2 cut(s) 772, 2157
Bst2BI CACGAG 2 cut(s) 1178, 1814
Bst2UI CCWGG 2 cut(s) 815, 2286
Bst4CI ACNGT 4 cut(s) 307, 1499, 2090, 2309
Bst6I CTCTTC 3 cut(s) 521, 1064, 1309
BstACI GRCGYC 1 cut(s) 93
BstAUI TGTACA 1 cut(s) 1755
BstBAI YACGTR 1 cut(s) 1753
BstBI TTCGAA 2 cut(s) 48, 426
BstC8I GCNNGC 6 cut(s) 354, 705, 1140, 1357, 1857, 2390
BstDEI CTNAG 8 cut(s) 575, 585, 648, 687, 1623, 1774, 2181, 2497
BstDSI CCRYGG 1 cut(s) 1473
BstEII GGTNACC 1 cut(s) 1444
BstENI CCTNNNNNAGG 1 cut(s) 1542
BstF5I GGATG 9 cut(s) 318, 469, 624, 1393, 1823, 2059, 2080, 2206, 2476
BstFNI CGCG 1 cut(s) 537
BstHHI GCGC 1 cut(s) 537
BstKTI GATC 6 cut(s) 20, 469, 1792, 1832, 2046, 2132
BstMAI GTCTC 3 cut(s) 2147, 2160, 2372
BstMBI GATC 6 cut(s) 17, 466, 1789, 1829, 2043, 2129
BstMCI CGRYCG 1 cut(s) 2153
BstMWI GCNNNNNNNGC 4 cut(s) 1226, 1292, 1365, 2242
BstNI CCWGG 2 cut(s) 815, 2286
BstNSI RCATGY 2 cut(s) 1421, 1859
BstPI GGTNACC 1 cut(s) 1444
BstSCI CCNGG 3 cut(s) 345, 813, 2284
BstSFI CTRYAG 3 cut(s) 1157, 1929, 2081
BstSLI GKGCMC 1 cut(s) 1683
BstUI CGCG 1 cut(s) 537
BstV1I GCAGC 4 cut(s) 862, 1143, 1346, 1615
BstV2I GAAGAC 2 cut(s) 1461, 2043
BstX2I RGATCY 3 cut(s) 17, 1829, 2129
BstYI RGATCY 3 cut(s) 17, 1829, 2129
BstZ17I GTATAC 2 cut(s) 772, 2157
Bsu15I ATCGAT 1 cut(s) 2439
BsuI GTATCC 2 cut(s) 873, 2541
BsuRI GGCC 3 cut(s) 811, 2392, 2571
BsuTUI ATCGAT 1 cut(s) 2439
BtgI CCRYGG 1 cut(s) 1473
BtsCI GGATG 9 cut(s) 318, 469, 624, 1393, 1823, 2059, 2080, 2206, 2476
BtsI GCAGTG 3 cut(s) 751, 2015, 2289
BveI ACCTGC 1 cut(s) 753
Cac8I GCNNGC 6 cut(s) 354, 705, 1140, 1357, 1857, 2390
CfoI GCGC 1 cut(s) 537
Cfr10I RCCGGY 2 cut(s) 1880, 2148
Cfr13I GGNCC 3 cut(s) 517, 810, 997
ClaI ATCGAT 1 cut(s) 2439
CseI GACGC 2 cut(s) 82, 1587
Csp6I GTAC 5 cut(s) 253, 582, 1690, 1756, 2349
CspCI CAANNNNNGTGG 2 cut(s) 1797, 1832
CviQI GTAC 5 cut(s) 253, 582, 1690, 1756, 2349
DdeI CTNAG 8 cut(s) 575, 585, 648, 687, 1623, 1774, 2181, 2497
DpnI GATC 6 cut(s) 19, 468, 1791, 1831, 2045, 2131
DpnII GATC 6 cut(s) 17, 466, 1789, 1829, 2043, 2129
EaeI YGGCCR 1 cut(s) 2569
Eam1104I CTCTTC 3 cut(s) 521, 1064, 1309
EarI CTCTTC 3 cut(s) 521, 1064, 1309
Eco130I CCWWGG 2 cut(s) 317, 1473
Eco147I AGGCCT 1 cut(s) 2392
Eco24I GRGCYC 1 cut(s) 2238
Eco47I GGWCC 2 cut(s) 517, 997
Eco57I CTGAAG 2 cut(s) 410, 941
Eco91I GGTNACC 1 cut(s) 1444
EcoNI CCTNNNNNAGG 1 cut(s) 1542
EcoO109I RGGNCCY 2 cut(s) 810, 997
EcoO65I GGTNACC 1 cut(s) 1444
EcoRII CCWGG 2 cut(s) 813, 2284
EcoT14I CCWWGG 2 cut(s) 317, 1473
EcoT22I ATGCAT 4 cut(s) 412, 950, 1807, 1861
EcoT38I GRGCYC 1 cut(s) 2238
ErhI CCWWGG 2 cut(s) 317, 1473
FaqI GGGAC 6 cut(s) 184, 614, 1010, 1316, 1342, 1561
FauI CCCGC 1 cut(s) 837
FauNDI CATATG 1 cut(s) 858
FbaI TGATCA 1 cut(s) 466
FblI GTMKAC 2 cut(s) 771, 2156
Fnu4HI GCNGC 8 cut(s) 533, 538, 876, 1157, 1360, 1629, 1956, 2367
FokI GGATG 9 cut(s) 325, 476, 631, 1400, 1810, 2066, 2087, 2213, 2483
FriOI GRGCYC 1 cut(s) 2238
Fsp4HI GCNGC 8 cut(s) 533, 538, 876, 1157, 1360, 1629, 1956, 2367
FspBI CTAG 3 cut(s) 975, 1850, 2423
GlaI GCGC 1 cut(s) 536
GluI GCNGC 8 cut(s) 533, 538, 876, 1157, 1360, 1629, 1956, 2367
HaeIII GGCC 3 cut(s) 811, 2392, 2571
HapII CCGG 4 cut(s) 346, 866, 1881, 2149
HgaI GACGC 2 cut(s) 82, 1587
HhaI GCGC 1 cut(s) 537
Hin1I GRCGYC 1 cut(s) 93
Hin6I GCGC 1 cut(s) 535
HinP1I GCGC 1 cut(s) 535
HindIII AAGCTT 2 cut(s) 259, 608
HinfI GANTC 5 cut(s) 197, 553, 2426, 2474, 2483
HpaII CCGG 4 cut(s) 346, 866, 1881, 2149
HphI GGTGA 8 cut(s) 73, 256, 308, 380, 512, 562, 1438, 1895
Hpy188I TCNGA 8 cut(s) 196, 220, 517, 921, 1113, 1639, 2104, 2410
Hpy188III TCNNGA 9 cut(s) 824, 866, 1164, 1776, 1827, 2051, 2163, 2300, 2480
Hpy99I CGWCG 1 cut(s) 526
HpyCH4III ACNGT 4 cut(s) 307, 1499, 2090, 2309
HpyCH4IV ACGT 2 cut(s) 1130, 1752
HpyF10VI GCNNNNNNNGC 4 cut(s) 1226, 1292, 1365, 2242
HpyF3I CTNAG 8 cut(s) 575, 585, 648, 687, 1623, 1774, 2181, 2497
HpySE526I ACGT 2 cut(s) 1130, 1752
Hsp92I GRCGYC 1 cut(s) 93
HspAI GCGC 1 cut(s) 535
KflI GGGWCCC 1 cut(s) 997
Kpn2I TCCGGA 1 cut(s) 865
Ksp22I TGATCA 1 cut(s) 466
Kzo9I GATC 6 cut(s) 17, 466, 1789, 1829, 2043, 2129
LmnI GCTCC 6 cut(s) 349, 445, 1124, 1225, 2299, 2323
Lsp1109I GCAGC 4 cut(s) 862, 1143, 1346, 1615
LweI GCATC 7 cut(s) 303, 831, 1378, 1814, 1832, 2065, 2305
MaeI CTAG 3 cut(s) 975, 1850, 2423
MaeII ACGT 2 cut(s) 1130, 1752
MaeIII GTNAC 5 cut(s) 895, 989, 1395, 1444, 2095
MalI GATC 6 cut(s) 19, 468, 1791, 1831, 2045, 2131
MbiI CCGCTC 1 cut(s) 1955
MboI GATC 6 cut(s) 17, 466, 1789, 1829, 2043, 2129
MfeI CAATTG 1 cut(s) 1898
MflI RGATCY 3 cut(s) 17, 1829, 2129
MhlI GDGCHC 3 cut(s) 1683, 1729, 2238
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 3 cut(s) 441, 495, 677
Mph1103I ATGCAT 4 cut(s) 412, 950, 1807, 1861
MroI TCCGGA 1 cut(s) 865
MseI TTAA 5 cut(s) 405, 1968, 2060, 2117, 2123
MslI CAYNNNNRTG 4 cut(s) 1457, 1491, 1586, 2091
MspA1I CMGCKG 1 cut(s) 2369
MspI CCGG 4 cut(s) 346, 866, 1881, 2149
MspR9I CCNGG 3 cut(s) 347, 815, 2286
MunI CAATTG 1 cut(s) 1898
Mva1269I GAATGC 1 cut(s) 950
MvaI CCWGG 2 cut(s) 815, 2286
MvnI CGCG 1 cut(s) 537
MwoI GCNNNNNNNGC 4 cut(s) 1226, 1292, 1365, 2242
NciI CCSGG 1 cut(s) 347
NcoI CCATGG 1 cut(s) 1473
NdeI CATATG 1 cut(s) 858
NdeII GATC 6 cut(s) 17, 466, 1789, 1829, 2043, 2129
NlaIV GGNNCC 6 cut(s) 19, 344, 519, 812, 998, 999
NmeAIII GCCGAG 2 cut(s) 274, 2547
NmuCI GTSAC 1 cut(s) 1444
NsiI ATGCAT 4 cut(s) 412, 950, 1807, 1861
NspI RCATGY 2 cut(s) 1421, 1859
NspV TTCGAA 2 cut(s) 48, 426
PaeI GCATGC 1 cut(s) 1859
PceI AGGCCT 1 cut(s) 2392
PciI ACATGT 1 cut(s) 1417
PcsI WCGNNNNNNNCGW 2 cut(s) 521, 2159
PctI GAATGC 1 cut(s) 950
PfeI GAWTC 4 cut(s) 553, 2426, 2474, 2483
PflFI GACNNNGTC 1 cut(s) 1001
PfoI TCCNGGA 1 cut(s) 345
PkrI GCNGC 8 cut(s) 534, 539, 877, 1158, 1361, 1630, 1957, 2368
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
Ppu21I YACGTR 1 cut(s) 1753
PpuMI RGGWCCY 1 cut(s) 997
PscI ACATGT 1 cut(s) 1417
PsiI TTATAA 1 cut(s) 732
Psp5II RGGWCCY 1 cut(s) 997
Psp6I CCWGG 2 cut(s) 813, 2284
PspEI GGTNACC 1 cut(s) 1444
PspGI CCWGG 2 cut(s) 813, 2284
PspN4I GGNNCC 6 cut(s) 19, 344, 519, 812, 998, 999
PspPI GGNCC 3 cut(s) 517, 810, 997
PspPPI RGGWCCY 1 cut(s) 997
PstI CTGCAG 1 cut(s) 1161
PsuI RGATCY 3 cut(s) 17, 1829, 2129
PsyI GACNNNGTC 1 cut(s) 1001
RsaI GTAC 5 cut(s) 254, 583, 1691, 1757, 2350
RsaNI GTAC 5 cut(s) 253, 582, 1690, 1756, 2349
RseI CAYNNNNRTG 4 cut(s) 1457, 1491, 1586, 2091
SaqAI TTAA 5 cut(s) 405, 1968, 2060, 2117, 2123
SatI GCNGC 8 cut(s) 533, 538, 876, 1157, 1360, 1629, 1956, 2367
Sau3AI GATC 6 cut(s) 17, 466, 1789, 1829, 2043, 2129
Sau96I GGNCC 3 cut(s) 517, 810, 997
SchI GAGTC 1 cut(s) 206
ScrFI CCNGG 3 cut(s) 347, 815, 2286
SduI GDGCHC 3 cut(s) 1683, 1729, 2238
SfaNI GCATC 7 cut(s) 303, 831, 1378, 1814, 1832, 2065, 2305
SfcI CTRYAG 3 cut(s) 1157, 1929, 2081
SfuI TTCGAA 2 cut(s) 48, 426
SinI GGWCC 2 cut(s) 517, 997
SmiMI CAYNNNNRTG 4 cut(s) 1457, 1491, 1586, 2091
SmlI CTYRAG 1 cut(s) 1709
SmoI CTYRAG 1 cut(s) 1709
SphI GCATGC 1 cut(s) 1859
SseBI AGGCCT 1 cut(s) 2392
SspMI CTAG 3 cut(s) 975, 1850, 2423
StuI AGGCCT 1 cut(s) 2392
StyD4I CCNGG 3 cut(s) 345, 813, 2284
StyI CCWWGG 2 cut(s) 317, 1473
TaaI ACNGT 4 cut(s) 307, 1499, 2090, 2309
TaiI ACGT 2 cut(s) 1133, 1755
TaqI TCGA 9 cut(s) 48, 426, 614, 1936, 2162, 2341, 2429, 2439, 2451
TaqII GACCGA 1 cut(s) 893
TatI WGTACW 3 cut(s) 252, 1689, 1755
TauI GCSGC 4 cut(s) 535, 540, 1958, 2369
TfiI GAWTC 4 cut(s) 553, 2426, 2474, 2483
Tru1I TTAA 5 cut(s) 405, 1968, 2060, 2117, 2123
Tru9I TTAA 5 cut(s) 405, 1968, 2060, 2117, 2123
TseFI GTSAC 1 cut(s) 1444
TseI GCWGC 4 cut(s) 875, 1156, 1359, 1628
Tsp45I GTSAC 1 cut(s) 1444
Tth111I GACNNNGTC 1 cut(s) 1001
VpaK11BI GGWCC 2 cut(s) 517, 997
XagI CCTNNNNNAGG 1 cut(s) 1542
XapI RAATTY 3 cut(s) 1887, 2176, 2330
XceI RCATGY 2 cut(s) 1421, 1859
XmiI GTMKAC 2 cut(s) 771, 2156
XspI CTAG 3 cut(s) 975, 1850, 2423
Zsp2I ATGCAT 4 cut(s) 412, 950, 1807, 1861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.