Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0009080

Physical Location & Seq

Genomic Coordinates Forward (+)

11863500 .. 11868348

Gene Structure 4849 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g15180.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGGAAGCTTTGCAAGCTTCCCTCCCGCAAGTCCCTCACACCCAATTCGAACCCGACACTGATAAAATCAAACGCAACCTCACCAAGAAAGGCGTCCACCCAACTCCCAAGATCGTTCACACCGTCCGCAAAAAAGAAATCCAAAAACACAACCGCAAGCTCAACCGCCTCGCGGGGGCGGATCCATCTCCGCCGTTCTCGCAGACCCAAAAACAGGCCTTGGCCGAAGAAACCCATTTCCGAACTCTCAAGCGCGAGTTCAGGGACTTCACCAAAGCGGTCAAAGCGAAGAGTGGCGGCGAGGAATTCATGGTTGGGAGGCCTTGGGAGGGGATTGAGAGAATTGGGTTCCGAGAGCTCGCCAGTACTAGTGCTGAGTACGGCGGAGAGAAGCTGAAGAAGGAGGAGCTGAATGCGTTGAGGGAAATGTTCGAGGCCCGGAAGCTCGAGGAGTTGAAATGGGTGTTGGATGATGATATTGAGATGAAAGAAGAGTGGTTCAATGGTGAAGACAGGGTCTGGGACCCTTCTAAGCGGCGGAGACGTGGCGAGGGCGAGGTGATTCAGTTCCTTGTTGATAGGCTTAGTTCTACCGAGTTTTCGGCGAGGGACTGGAAGCTTTCGAAGATGATGAAACAGTCAGGGTTGCAGTTCACTGAAGGTCAGATGCTTAAAATTCTTGGAGGACTTGGTGCTAAGGGATGTTGGAAACAGGCATTGTCTGTTGTGGATTGGGCATACAATGATAAGGGGAATAAACATTACAAAAGCAGGTTCGTATATACAAAACTTTTGGCAGTTCTTGGGAAGGCACGAAGGCCCCATGAAGCTCTTCGCATTTTCAATCAGATGCTTGGAGATTTCAACATATATCCTGATGTTGCTGCCTACCATAGCATTGTGGTTACACTTGGTCAAACCGGTCTTCTGAAGGAATTGCTGAAGATTATTGAATGCATGAGGCAGAAACCTTTCAAAGGAAATAAGAGTTTGTCTCGCACGAACTGGGACCCTGTTGTTGAACCCGATGTCATTGTGTATAATGCTTTACTGAATGCTTGTGCTCAAACCCATCAGTGGAAGGGTGTATCTTGGGTCTTTAACCAGTTGAGGAAGAGTGGCCTGAAACCTAATGGAGCAACATATGGACTTGCTATGGAGGTAATGCTGCAATCTGGGAAATATGACCTTGTCCACGAACTCTTTAGGAAAATGAAAAAAAGTGGAGAAGCTCCAAAAGCTCTTAACTACAAAGTTATTGTCAAAGCTTTTTGGTGTGAAGGGAAAATTGATGAAGCAGTGGAAGCAGTTAGGGATATGGAACAAAGAGGAGTGGTTGGAACAGGCAGTGTATATTATGAGTTAGCTTCCTGCCTTTGCAACAGTGGCAGGTGGCAGGATGCCCTGGTAGAAGTTGAGAAGATGAAAAAGGTACCGAATACTAAACCTTTGGAGGTCACCTTCACAGGCATGATAACGTCTTCCATGGAGGGAAGACGCATTGATGACTGCATATCTATATTTGAACACATGAAAACCCAGTGTTCCCCTAACATAGGGACCATAAATGCAATGCTGAAAGTCTTTGGACGTAGCGATATGTTTTTCAAAGCTAAAGAATTGTTTGAAGAAATCAAGACGGTTAAACCTGATTCTGATCCGTTACCAGATGGAGGTGGTACTTCCCTTGCCCCCGATGAGTACACATATATCTCAATGCTGAAGGCATCTGCCAGTGCTCTACAATGGGAATACTTTGAACATGTGTACAAGGAAATGGCTTTGTCTGGATATCAAATCGATCAAAGTAAACACGCATCGCTACTTGTGGAAGCATCCAGAGCTGGGAAGTGCCATCTACTCGAGCACGCATTTGATGCAATTTTGGAAGCTGGAGAAATCCCCCATCCGTTGTTCTTCACTGAAATGGTATATCAAGCTACAGTCCGGCGTGATTATAAGAGAGCCGTAACCTTGGTCAGCGCCATGGCTCACGCCCCGTTTCAAATCAGCGATAGGCAGTGGACGTACCTTTTCGAGAAAAATGGAGACGCGATCAGTCAGGATGGTTTAGAGGAACTGCTGGATGCTCTAAACAATTGTGATGTAACATCGGAAGCCACGGTCATAAACTTGAAAAGATCATTGCTTTCTCTTTGTCGGTCTTACAGATCAAGAGGCTTACCAAGTTCCGGCTATTTTGGCAGTGGAGCCACAGATACATCATCCTCGGTCTATAGCAACGAGGGATTTGATGGTAACAAACTGGTTATTCCGAATCATTATTTGGATTCGGTTGATGGTATCCCCAAGCCGGGGAGGGATCATCTTGTTGGTGAGAGTATTGACGTTCCCTCAGATGAGTTTTCTGTTGGTAAGACCCGCACCAGAAGAGACATAGACATGGTTAGGTCAATGGATTATGTTTCAGATGAAGATGGAGAACACTCAGAAGTCGATGAGGAAATTGAAACACTGGTAAATGGAGTTGATTCTCACGGCTCGGATTTGCCCGCGGCAAATGAAATACTGGAAGCTTGGAAGGAAAGAAGGAAAAGGGATGGGATACTCTTCCCCTTTCAACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016787 GO:0016788 GO:0018130 GO:0019438 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0042793 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

863

Amino Acids

97.62

Weight (kDa)

6.64

Isoelectric Point (pI)

39.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67570
fragaria_vesca	FvH4_1g17780 FvH4_1g17780 FvH4_1g17780 FvH4_1g17891
malus_domestica	MD02G1186800.v1.1
prunus_persica	Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1
pyrus_communis	pycom02g15180
rosa_chinensis	RchiOBHm_Chr2g0108231
rosa_laevigata	RLG00000017648
rosa_multiflora	Rmu_sc0007406.1_g000010
rosa_roxburghii	Rroxscaffold_2G00135470
rosa_rugosa	Rorug02G0151200
rosa_samantha	Rh2AG199800 Rh2BG212500 Rh2CG204500 Rh2DG207400
rosa_wichuraiana	Rw2G015900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1959
AarI	CACCTGC	1 cut(s)	1380
Acc36I	ACCTGC	2 cut(s)	762, 1380
Acc65I	GGTACC	1 cut(s)	1432
AccB1I	GGYRCC	1 cut(s)	1432
AccII	CGCG	4 cut(s)	173, 255, 2054, 2516
AclWI	GGATC	4 cut(s)	176, 189, 1652, 2331
AcoI	YGGCCR	1 cut(s)	222
AcsI	RAATTY	2 cut(s)	305, 675
AcuI	CTGAAG	5 cut(s)	416, 678, 950, 962, 1742
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	7 cut(s)	367, 380, 1434, 1681, 1703, 1769, 2030
AflIII	ACRYGT	1 cut(s)	1762
AgeI	ACCGGT	1 cut(s)	920
AhlI	ACTAGT	1 cut(s)	368
AjiI	CACGTC	1 cut(s)	545
AjnI	CCWGG	1 cut(s)	1404
AjuI	GAANNNNNNNTTGG	6 cut(s)	297, 329, 449, 481, 2270, 2302
Alw21I	GWGCWC	4 cut(s)	360, 1066, 1741, 1869
Alw26I	GTCTC	4 cut(s)	535, 999, 2043, 2388
AlwI	GGATC	4 cut(s)	176, 189, 1652, 2331
AlwNI	CAGNNNCTG	1 cut(s)	519
Ama87I	CYCGRG	2 cut(s)	446, 1862
AoxI	GGCC	6 cut(s)	216, 222, 320, 435, 818, 1120
ApeKI	GCWGC	2 cut(s)	884, 1168
ApoI	RAATTY	2 cut(s)	305, 675
ArsI	GACNNNNNNTTYG	2 cut(s)	1245, 1277
AsiGI	ACCGGT	1 cut(s)	920
Asp700I	GAANNNNTTC	2 cut(s)	831, 971
Asp718I	GGTACC	1 cut(s)	1432
AspLEI	GCGC	2 cut(s)	255, 1985
AspS9I	GGNCC	5 cut(s)	436, 523, 819, 1009, 1560
AsuC2I	CCSGG	2 cut(s)	439, 2316
AsuHPI	GGTGA	6 cut(s)	73, 262, 518, 571, 1450, 2348
AsuII	TTCGAA	2 cut(s)	48, 623
AvaI	CYCGRG	2 cut(s)	446, 1862
AvaII	GGWCC	3 cut(s)	523, 1009, 1560
BamHI	GGATCC	1 cut(s)	181
BanI	GGYRCC	1 cut(s)	1432
BanII	GRGCYC	1 cut(s)	360
BbsI	GAAGAC	4 cut(s)	516, 917, 1473, 1501
Bbv12I	GWGCWC	4 cut(s)	360, 1066, 1741, 1869
BbvI	GCAGC	2 cut(s)	871, 1155
BceAI	ACGGC	4 cut(s)	178, 397, 1952, 2515
BciT130I	CCWGG	1 cut(s)	1406
BciVI	GTATCC	2 cut(s)	2315, 2559
BcnI	CCSGG	2 cut(s)	439, 2316
BcoDI	GTCTC	4 cut(s)	535, 999, 2043, 2388
BcuI	ACTAGT	1 cut(s)	368
BfaI	CTAG	1 cut(s)	369
BfmI	CTRYAG	2 cut(s)	1941, 2236
BfoI	RGCGCY	1 cut(s)	1986
BfuAI	ACCTGC	2 cut(s)	762, 1380
BfuI	GTATCC	2 cut(s)	2315, 2559
BisI	GCNGC	5 cut(s)	298, 536, 885, 1169, 2517
BlsI	GCNGC	5 cut(s)	299, 537, 886, 1170, 2518
BmcAI	AGTACT	1 cut(s)	367
Bme1390I	CCNGG	3 cut(s)	439, 1406, 2316
Bme18I	GGWCC	3 cut(s)	523, 1009, 1560
BmeT110I	CYCGRG	2 cut(s)	446, 1862
BmgBI	CACGTC	1 cut(s)	545
BmgT120I	GGNCC	5 cut(s)	436, 523, 819, 1009, 1560
BmrFI	CCNGG	3 cut(s)	439, 1406, 2316
BmrI	ACTGGG	2 cut(s)	1015, 1534
BmsI	GCATC	8 cut(s)	657, 840, 1390, 1736, 1826, 1844, 1867, 2077
BmuI	ACTGGG	2 cut(s)	1015, 1534
BpiI	GAAGAC	4 cut(s)	516, 917, 1473, 1501
BplI	GAGNNNNNCTC	2 cut(s)	979, 1011
BpmI	CTGGAG	1 cut(s)	1914
Bpu10I	CCTNAGC	1 cut(s)	696
Bpu14I	TTCGAA	2 cut(s)	48, 623
BpuEI	CTTGAG	1 cut(s)	233
BpuMI	CCSGG	2 cut(s)	439, 2316
Bsa29I	ATCGAT	1 cut(s)	1800
BsaBI	GATNNNNATC	1 cut(s)	1656
BsaHI	GRCGYC	1 cut(s)	93
BsaWI	WCCGGW	1 cut(s)	920
Bse118I	RCCGGY	1 cut(s)	920
Bse1I	ACTGG	9 cut(s)	363, 617, 1010, 1105, 1540, 1734, 2271, 2481, 2535
Bse3DI	GCAATG	2 cut(s)	1578, 2144
Bse8I	GATNNNNATC	1 cut(s)	1656
BseBI	CCWGG	1 cut(s)	1406
BseCI	ATCGAT	1 cut(s)	1800
BseGI	GGATG	9 cut(s)	475, 707, 1405, 1835, 1906, 2071, 2092, 2225, 2566
BseJI	GATNNNNATC	1 cut(s)	1656
BseMI	GCAATG	2 cut(s)	1578, 2144
BseMII	CTCAG	3 cut(s)	366, 2370, 2463
BseNI	ACTGG	9 cut(s)	363, 617, 1010, 1105, 1540, 1734, 2271, 2481, 2535
BseRI	GAGGAG	3 cut(s)	419, 464, 1344
BseXI	GCAGC	2 cut(s)	871, 1155
BseYI	CCCAGC	1 cut(s)	1844
Bsh1236I	CGCG	4 cut(s)	173, 255, 2054, 2516
BshFI	GGCC	6 cut(s)	218, 224, 322, 437, 820, 1122
BshNI	GGYRCC	1 cut(s)	1432
BshTI	ACCGGT	1 cut(s)	920
BshVI	ATCGAT	1 cut(s)	1800
BsiHKAI	GWGCWC	4 cut(s)	360, 1066, 1741, 1869
BsiHKCI	CYCGRG	2 cut(s)	446, 1862
BsiSI	CCGG	5 cut(s)	439, 921, 1948, 2193, 2315
BslFI	GGGAC	6 cut(s)	17, 278, 536, 623, 1022, 1573
BsmAI	GTCTC	4 cut(s)	535, 999, 2043, 2388
BsmBI	CGTCTC	2 cut(s)	535, 2043
BsmFI	GGGAC	6 cut(s)	17, 278, 536, 623, 1022, 1573
BsmI	GAATGC	3 cut(s)	418, 959, 1060
BsnI	GGCC	6 cut(s)	218, 224, 322, 437, 820, 1122
BsoBI	CYCGRG	2 cut(s)	446, 1862
Bsp119I	TTCGAA	2 cut(s)	48, 623
Bsp1286I	GDGCHC	4 cut(s)	360, 1066, 1741, 1869
Bsp1407I	TGTACA	1 cut(s)	1767
Bsp143I	GATC	8 cut(s)	111, 181, 1657, 1801, 2055, 2141, 2171, 2323
Bsp19I	CCATGG	2 cut(s)	1485, 1986
BspANI	GGCC	6 cut(s)	218, 224, 322, 437, 820, 1122
BspCNI	CTCAG	3 cut(s)	367, 2369, 2462
BspDI	ATCGAT	1 cut(s)	1800
BspFNI	CGCG	4 cut(s)	173, 255, 2054, 2516
BspMI	ACCTGC	2 cut(s)	762, 1380
BspPI	GGATC	4 cut(s)	176, 189, 1652, 2331
BspQI	GCTCTTC	1 cut(s)	837
BspT104I	TTCGAA	2 cut(s)	48, 623
BspT107I	GGYRCC	1 cut(s)	1432
BsrDI	GCAATG	2 cut(s)	1578, 2144
BsrFI	RCCGGY	1 cut(s)	920
BsrGI	TGTACA	1 cut(s)	1767
BsrI	ACTGG	9 cut(s)	363, 617, 1010, 1105, 1540, 1734, 2271, 2481, 2535
BssAI	RCCGGY	1 cut(s)	920
BssMI	GATC	8 cut(s)	111, 181, 1657, 1801, 2055, 2141, 2171, 2323
BssNI	GRCGYC	1 cut(s)	93
BssT1I	CCWWGG	5 cut(s)	219, 323, 1485, 1974, 1986
Bst2UI	CCWGG	1 cut(s)	1406
Bst4CI	ACNGT	6 cut(s)	124, 639, 1385, 1642, 1945, 2125
Bst6I	CTCTTC	6 cut(s)	284, 486, 837, 1109, 2386, 2576
BstACI	GRCGYC	1 cut(s)	93
BstAPI	GCANNNNNTGC	1 cut(s)	1877
BstAUI	TGTACA	1 cut(s)	1767
BstBI	TTCGAA	2 cut(s)	48, 623
BstC8I	GCNNGC	5 cut(s)	15, 158, 360, 1869, 2514
BstDEI	CTNAG	6 cut(s)	375, 531, 584, 696, 2356, 2449
BstDSI	CCRYGG	4 cut(s)	1485, 1986, 2121, 2514
BstEII	GGTNACC	1 cut(s)	1456
BstENI	CCTNNNNNAGG	2 cut(s)	975, 1554
BstF5I	GGATG	9 cut(s)	475, 707, 1405, 1835, 1906, 2071, 2092, 2225, 2566
BstFNI	CGCG	4 cut(s)	173, 255, 2054, 2516
BstH2I	RGCGCY	1 cut(s)	1986
BstHHI	GCGC	2 cut(s)	255, 1985
BstKTI	GATC	8 cut(s)	114, 184, 1660, 1804, 2058, 2144, 2174, 2326
BstMAI	GTCTC	4 cut(s)	535, 999, 2043, 2388
BstMBI	GATC	8 cut(s)	111, 181, 1657, 1801, 2055, 2141, 2171, 2323
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 199, 284, 1238, 1304, 1386, 1841, 1877, 2202
BstNI	CCWGG	1 cut(s)	1406
BstNSI	RCATGY	1 cut(s)	1766
BstPI	GGTNACC	1 cut(s)	1456
BstSCI	CCNGG	3 cut(s)	437, 1404, 2314
BstSFI	CTRYAG	2 cut(s)	1941, 2236
BstUI	CGCG	4 cut(s)	173, 255, 2054, 2516
BstV1I	GCAGC	2 cut(s)	871, 1155
BstV2I	GAAGAC	4 cut(s)	516, 917, 1473, 1501
BstX2I	RGATCY	1 cut(s)	181
BstYI	RGATCY	1 cut(s)	181
Bsu15I	ATCGAT	1 cut(s)	1800
BsuI	GTATCC	2 cut(s)	2315, 2559
BsuRI	GGCC	6 cut(s)	218, 224, 322, 437, 820, 1122
BsuTUI	ATCGAT	1 cut(s)	1800
BtgI	CCRYGG	4 cut(s)	1485, 1986, 2121, 2514
BtgZI	GCGATG	1 cut(s)	1803
BtrI	CACGTC	1 cut(s)	545
BtsCI	GGATG	9 cut(s)	475, 707, 1405, 1835, 1906, 2071, 2092, 2225, 2566
BtsI	GCAGTG	4 cut(s)	1305, 1354, 2027, 2212
BveI	ACCTGC	2 cut(s)	762, 1380
Cac8I	GCNNGC	5 cut(s)	15, 158, 360, 1869, 2514
CaiI	CAGNNNCTG	1 cut(s)	519
CfoI	GCGC	2 cut(s)	255, 1985
Cfr10I	RCCGGY	1 cut(s)	920
Cfr13I	GGNCC	5 cut(s)	436, 523, 819, 1009, 1560
Cfr42I	CCGCGG	1 cut(s)	2517
ClaI	ATCGAT	1 cut(s)	1800
CseI	GACGC	3 cut(s)	82, 1506, 2060
Csp6I	GTAC	7 cut(s)	366, 379, 1433, 1680, 1702, 1768, 2029
CspAI	ACCGGT	1 cut(s)	920
CviAII	CATG	9 cut(s)	310, 824, 958, 1471, 1486, 1531, 1763, 1987, 2404
CviQI	GTAC	7 cut(s)	366, 379, 1433, 1680, 1702, 1768, 2029
DdeI	CTNAG	6 cut(s)	375, 531, 584, 696, 2356, 2449
DpnI	GATC	8 cut(s)	113, 183, 1659, 1803, 2057, 2143, 2173, 2325
DpnII	GATC	8 cut(s)	111, 181, 1657, 1801, 2055, 2141, 2171, 2323
EaeI	YGGCCR	1 cut(s)	222
Eam1104I	CTCTTC	6 cut(s)	284, 486, 837, 1109, 2386, 2576
EarI	CTCTTC	6 cut(s)	284, 486, 837, 1109, 2386, 2576
EciI	GGCGGA	4 cut(s)	180, 194, 399, 553
Ecl136II	GAGCTC	1 cut(s)	358
Eco130I	CCWWGG	5 cut(s)	219, 323, 1485, 1974, 1986
Eco147I	AGGCCT	2 cut(s)	218, 322
Eco24I	GRGCYC	1 cut(s)	360
Eco32I	GATATC	1 cut(s)	1793
Eco47I	GGWCC	3 cut(s)	523, 1009, 1560
Eco53kI	GAGCTC	1 cut(s)	358
Eco57I	CTGAAG	5 cut(s)	416, 678, 950, 962, 1742
Eco88I	CYCGRG	2 cut(s)	446, 1862
Eco91I	GGTNACC	1 cut(s)	1456
EcoICRI	GAGCTC	1 cut(s)	358
EcoNI	CCTNNNNNAGG	2 cut(s)	975, 1554
EcoO109I	RGGNCCY	3 cut(s)	523, 819, 1009
EcoO65I	GGTNACC	1 cut(s)	1456
EcoRI	GAATTC	1 cut(s)	305
EcoRII	CCWGG	1 cut(s)	1404
EcoRV	GATATC	1 cut(s)	1793
EcoT14I	CCWWGG	5 cut(s)	219, 323, 1485, 1974, 1986
EcoT22I	ATGCAT	1 cut(s)	959
EcoT38I	GRGCYC	1 cut(s)	360
ErhI	CCWWGG	5 cut(s)	219, 323, 1485, 1974, 1986
Esp3I	CGTCTC	2 cut(s)	535, 2043
FaeI	CATG	9 cut(s)	313, 827, 961, 1474, 1489, 1534, 1766, 1990, 2407
FaqI	GGGAC	6 cut(s)	17, 278, 536, 623, 1022, 1573
FatI	CATG	9 cut(s)	309, 823, 957, 1470, 1485, 1530, 1762, 1986, 2403
FauI	CCCGC	4 cut(s)	33, 166, 2390, 2521
FauNDI	CATATG	1 cut(s)	1144
Fnu4HI	GCNGC	5 cut(s)	298, 536, 885, 1169, 2517
FokI	GGATG	9 cut(s)	482, 714, 1412, 1822, 1893, 2078, 2099, 2212, 2573
FriOI	GRGCYC	1 cut(s)	360
Fsp4HI	GCNGC	5 cut(s)	298, 536, 885, 1169, 2517
FspBI	CTAG	1 cut(s)	369
GlaI	GCGC	2 cut(s)	254, 1984
GluI	GCNGC	5 cut(s)	298, 536, 885, 1169, 2517
GsaI	CCCAGC	1 cut(s)	1848
GsuI	CTGGAG	1 cut(s)	1914
HaeII	RGCGCY	1 cut(s)	1986
HaeIII	GGCC	6 cut(s)	218, 224, 322, 437, 820, 1122
HapII	CCGG	5 cut(s)	439, 921, 1948, 2193, 2315
HgaI	GACGC	3 cut(s)	82, 1506, 2060
HhaI	GCGC	2 cut(s)	255, 1985
Hin1I	GRCGYC	1 cut(s)	93
Hin1II	CATG	9 cut(s)	313, 827, 961, 1474, 1489, 1534, 1766, 1990, 2407
Hin6I	GCGC	2 cut(s)	253, 1983
HinP1I	GCGC	2 cut(s)	253, 1983
HindIII	AAGCTT	5 cut(s)	6, 15, 617, 1266, 2535
HinfI	GANTC	5 cut(s)	562, 1652, 2278, 2291, 2492
HpaII	CCGG	5 cut(s)	439, 921, 1948, 2193, 2315
HphI	GGTGA	6 cut(s)	73, 262, 518, 571, 1450, 2348
Hpy166II	GTNNAC	8 cut(s)	97, 118, 654, 1195, 1704, 1768, 1811, 2025
Hpy188III	TCNNGA	7 cut(s)	875, 1636, 1788, 1839, 2038, 2063, 2175
Hpy8I	GTNNAC	8 cut(s)	97, 118, 654, 1195, 1704, 1768, 1811, 2025
HpyCH4III	ACNGT	6 cut(s)	124, 639, 1385, 1642, 1945, 2125
HpyCH4IV	ACGT	5 cut(s)	544, 1478, 1591, 2027, 2349
HpyCH4V	TGCA	8 cut(s)	13, 649, 957, 1171, 1380, 1512, 1571, 1880
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 199, 284, 1238, 1304, 1386, 1841, 1877, 2202
HpyF3I	CTNAG	6 cut(s)	375, 531, 584, 696, 2356, 2449
HpySE526I	ACGT	5 cut(s)	544, 1478, 1591, 2027, 2349
Hsp92I	GRCGYC	1 cut(s)	93
Hsp92II	CATG	9 cut(s)	313, 827, 961, 1474, 1489, 1534, 1766, 1990, 2407
HspAI	GCGC	2 cut(s)	253, 1983
KflI	GGGWCCC	2 cut(s)	523, 1009
KpnI	GGTACC	1 cut(s)	1436
KspI	CCGCGG	1 cut(s)	2517
Kzo9I	GATC	8 cut(s)	111, 181, 1657, 1801, 2055, 2141, 2171, 2323
LguI	GCTCTTC	1 cut(s)	837
LmnI	GCTCC	4 cut(s)	406, 1136, 1237, 2210
Lsp1109I	GCAGC	2 cut(s)	871, 1155
LweI	GCATC	8 cut(s)	657, 840, 1390, 1736, 1826, 1844, 1867, 2077
MaeI	CTAG	1 cut(s)	369
MaeII	ACGT	5 cut(s)	544, 1478, 1591, 2027, 2349
MaeIII	GTNAC	6 cut(s)	904, 1456, 1662, 1969, 2107, 2258
MalI	GATC	8 cut(s)	113, 183, 1659, 1803, 2057, 2143, 2173, 2325
MboI	GATC	8 cut(s)	111, 181, 1657, 1801, 2055, 2141, 2171, 2323
MfeI	CAATTG	1 cut(s)	2098
MflI	RGATCY	1 cut(s)	181
MhlI	GDGCHC	4 cut(s)	360, 1066, 1741, 1869
MmeI	TCCRAC	3 cut(s)	447, 686, 1318
Mph1103I	ATGCAT	1 cut(s)	959
MroXI	GAANNNNTTC	2 cut(s)	831, 971
MseI	TTAA	4 cut(s)	672, 1101, 1245, 1644
MslI	CAYNNNNRTG	3 cut(s)	1469, 1925, 2402
MspA1I	CMGCKG	1 cut(s)	2516
MspI	CCGG	5 cut(s)	439, 921, 1948, 2193, 2315
MspR9I	CCNGG	3 cut(s)	439, 1406, 2316
MunI	CAATTG	1 cut(s)	2098
Mva1269I	GAATGC	3 cut(s)	418, 959, 1060
MvaI	CCWGG	1 cut(s)	1406
MvnI	CGCG	4 cut(s)	173, 255, 2054, 2516
MwoI	GCNNNNNNNGC	9 cut(s)	14, 199, 284, 1238, 1304, 1386, 1841, 1877, 2202
NciI	CCSGG	2 cut(s)	439, 2316
NcoI	CCATGG	2 cut(s)	1485, 1986
NdeI	CATATG	1 cut(s)	1144
NdeII	GATC	8 cut(s)	111, 181, 1657, 1801, 2055, 2141, 2171, 2323
NlaIII	CATG	9 cut(s)	313, 827, 961, 1474, 1489, 1534, 1766, 1990, 2407
NmuCI	GTSAC	1 cut(s)	1456
NsiI	ATGCAT	1 cut(s)	959
NspI	RCATGY	1 cut(s)	1766
NspV	TTCGAA	2 cut(s)	48, 623
PaeR7I	CTCGAG	2 cut(s)	446, 1862
PaqCI	CACCTGC	1 cut(s)	1380
PceI	AGGCCT	2 cut(s)	218, 322
PciI	ACATGT	1 cut(s)	1762
PciSI	GCTCTTC	1 cut(s)	837
PcsI	WCGNNNNNNNCGW	1 cut(s)	120
PctI	GAATGC	3 cut(s)	418, 959, 1060
PdmI	GAANNNNTTC	2 cut(s)	831, 971
PfeI	GAWTC	5 cut(s)	562, 1652, 2278, 2291, 2492
PflFI	GACNNNGTC	2 cut(s)	515, 1190
PinAI	ACCGGT	1 cut(s)	920
PkrI	GCNGC	5 cut(s)	299, 537, 886, 1170, 2518
PpuMI	RGGWCCY	2 cut(s)	523, 1009
PscI	ACATGT	1 cut(s)	1762
PsiI	TTATAA	1 cut(s)	1959
Psp124BI	GAGCTC	1 cut(s)	360
Psp5II	RGGWCCY	2 cut(s)	523, 1009
Psp6I	CCWGG	1 cut(s)	1404
PspEI	GGTNACC	1 cut(s)	1456
PspFI	CCCAGC	1 cut(s)	1844
PspGI	CCWGG	1 cut(s)	1404
PspPI	GGNCC	5 cut(s)	436, 523, 819, 1009, 1560
PspPPI	RGGWCCY	2 cut(s)	523, 1009
PspXI	VCTCGAGB	2 cut(s)	446, 1862
PstNI	CAGNNNCTG	1 cut(s)	519
PsuI	RGATCY	1 cut(s)	181
PsyI	GACNNNGTC	2 cut(s)	515, 1190
RsaI	GTAC	7 cut(s)	367, 380, 1434, 1681, 1703, 1769, 2030
RsaNI	GTAC	7 cut(s)	366, 379, 1433, 1680, 1702, 1768, 2029
RseI	CAYNNNNRTG	3 cut(s)	1469, 1925, 2402
SacI	GAGCTC	1 cut(s)	360
SacII	CCGCGG	1 cut(s)	2517
SapI	GCTCTTC	1 cut(s)	837
SaqAI	TTAA	4 cut(s)	672, 1101, 1245, 1644
SatI	GCNGC	5 cut(s)	298, 536, 885, 1169, 2517
Sau3AI	GATC	8 cut(s)	111, 181, 1657, 1801, 2055, 2141, 2171, 2323
Sau96I	GGNCC	5 cut(s)	436, 523, 819, 1009, 1560
ScaI	AGTACT	1 cut(s)	367
ScrFI	CCNGG	3 cut(s)	439, 1406, 2316
SduI	GDGCHC	4 cut(s)	360, 1066, 1741, 1869
SfaNI	GCATC	8 cut(s)	657, 840, 1390, 1736, 1826, 1844, 1867, 2077
SfcI	CTRYAG	2 cut(s)	1941, 2236
Sfr274I	CTCGAG	2 cut(s)	446, 1862
Sfr303I	CCGCGG	1 cut(s)	2517
SfuI	TTCGAA	2 cut(s)	48, 623
SgrBI	CCGCGG	1 cut(s)	2517
SinI	GGWCC	3 cut(s)	523, 1009, 1560
SlaI	CTCGAG	2 cut(s)	446, 1862
SmiMI	CAYNNNNRTG	3 cut(s)	1469, 1925, 2402
SmlI	CTYRAG	3 cut(s)	248, 446, 1862
SmoI	CTYRAG	3 cut(s)	248, 446, 1862
SpeI	ACTAGT	1 cut(s)	368
SseBI	AGGCCT	2 cut(s)	218, 322
SspMI	CTAG	1 cut(s)	369
SstI	GAGCTC	1 cut(s)	360
StuI	AGGCCT	2 cut(s)	218, 322
StyD4I	CCNGG	3 cut(s)	437, 1404, 2314
StyI	CCWWGG	5 cut(s)	219, 323, 1485, 1974, 1986
TaaI	ACNGT	6 cut(s)	124, 639, 1385, 1642, 1945, 2125
TaiI	ACGT	5 cut(s)	547, 1481, 1594, 2030, 2352
TaqI	TCGA	8 cut(s)	48, 432, 447, 623, 1800, 1863, 2037, 2457
TaqII	GACCGA	2 cut(s)	2151, 2221
TatI	WGTACW	3 cut(s)	365, 1701, 1767
TauI	GCSGC	3 cut(s)	300, 538, 2519
TfiI	GAWTC	5 cut(s)	562, 1652, 2278, 2291, 2492
Tru1I	TTAA	4 cut(s)	672, 1101, 1245, 1644
Tru9I	TTAA	4 cut(s)	672, 1101, 1245, 1644
TseFI	GTSAC	1 cut(s)	1456
TseI	GCWGC	2 cut(s)	884, 1168
Tsp45I	GTSAC	1 cut(s)	1456
TspGWI	ACGGA	2 cut(s)	1650, 1899
Tth111I	GACNNNGTC	2 cut(s)	515, 1190
VpaK11BI	GGWCC	3 cut(s)	523, 1009, 1560
XagI	CCTNNNNNAGG	2 cut(s)	975, 1554
XapI	RAATTY	2 cut(s)	305, 675
XceI	RCATGY	1 cut(s)	1766
XhoI	CTCGAG	2 cut(s)	446, 1862
XmnI	GAANNNNTTC	2 cut(s)	831, 971
XspI	CTAG	1 cut(s)	369
ZrmI	AGTACT	1 cut(s)	367
Zsp2I	ATGCAT	1 cut(s)	959

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.