Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007406.1

Orthogroup ID

OG0009080

Physical Location & Seq

Genomic Coordinates Reverse (-)

26180 .. 30414

Gene Structure 4235 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007406.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

atgccttgggagagagtggagagaattgggttccgggagctggcgagtagtagcggtgagtatggtggagagaagctgaagaaggaggagttgaatgcattgagggaaatgttcgaaacccgaaaaagggaggagctgaaatgggtgttggatgatgatgtggagataaaagaggagtggtttgatggtgagaatagggtgtgggacccgacgaagcggcggcgcggcgagggggaggtgatccagtttcttgttgagaggcttagtggtactgagtttacaatgagggactggaagctttcgaggatgatgaagcagtcaggtttggagttcactgagggtcaggttttgaagattttgaatgggcttggtgctaagcaatgttggaagcaggcattgtctgtggtggaatgggtttataaggacaggggtaataaacactgcaaaagcaggtttgtatacacgaaacttttggcaattcttgggaaggcacgaaggccccaggaagctcttgacattttcaacatgatgcggggagattgtcatatgtatccggatattgctgcctatcattgcattgctgttacactcggtcaaacaggtcgtctgaaggaattgctgaaagttattgaatgcatgaggcagaaacctgtcaaaatagctagaaatatgtttcgtaactgggaccccgtccttgaacccaatgtagttgtatataatgctatactgaacgcttgtgttcaatcccgtcagtggaagagtgtatattgggtgttcaaccagttgagaaagagtggtctgaaacctactggagcaacgtatgggcttgctatggaggtaatgctgcagtctggaaagtttgacctcgtgcatgaattatttagaaaaatgaaaaaaagcggagaagctccaaaagctcttacctataaagttattgttagagctttatggtgtgaaggaaaagtgaatgaagctgtggaagcagtcagggacatggaacgaagaggagtggttgggacaagtggtgtctattacgagttagcttgctgcctttgcaagagtggtaggtgtcaggatgctctgttacaggttgagaagatgaaacatgtatctaatactaaacctttggaggtcaccttcacaggcatgataaggtcttccatggagggtggacatattgatgactgtatatccatatttgaacacatgaagaaccattgcacccctaacatggggacaataaatatgatgttgaaagtatttggacgcaccgatatgttttccaaagctaaagaattgtttgaagaaactaaggctgcaaaatctgattatgacccttcactggaaggtggtggtagttctcttgtgcccgatgagtacacatatacctcaatgctcaaggcttctgccagtgctctgcaatgggaatactttgaatacgtgtacaaggagatggctctctcgggatataaaatagatcaaagtaaaaatgcatcaatactcgtggaagcatccagatctgggaaggggtatctactagagcatgcatttgacaccacactggaagccggtgaaattccccatcaattgttctttattgaaatggtatatcaagctacagctcgacatgattacaagagagcggcaactctggttaatacaatggcttatgccccatttcaagtcagcgaaaggcagtggacagatgtttttgagaaaaatgaagacgggatcagtcaggatggtttaacgaaactgctgcatgctctacagcactgtgatgttacatcggaagccacgcttttaaacttaaaaagatctttgcaaagtctctgccggtcgtatacatcgagagacttctcaaattctatgtcagtatcatctttggatgataatgatgagggatttgatgataatgaagggctcatcatgccaaatcattctttagaatatattgatggtaagcccaagcctggcactgctcctcctgatgacagtagtgatgctccttttagtgaatttcctcatcgaaatagtacccaaagaggtgttgccgctgatatagagacaccttgcaggcctttggattatatttctgatgaagatggactagactcgacagaaatcgatgaggaaatcgaagcactgataagtaaggatgattctcacgaatctcattcgccctcaccaaaggaaataatgaaagattggaaggaaagaaggaaaaagcatgggatactcatgccctttcaactcggccaaaagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arf PPR

Protein Analysis

755

Amino Acids

86.22

Weight (kDa)

6.0

Isoelectric Point (pI)

44.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67570
fragaria_vesca	FvH4_1g17780 FvH4_1g17780 FvH4_1g17780 FvH4_1g17891
malus_domestica	MD02G1186800.v1.1
prunus_persica	Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1
pyrus_communis	pycom02g15180
rosa_chinensis	RchiOBHm_Chr2g0108231
rosa_laevigata	RLG00000017648
rosa_multiflora	Rmu_sc0007406.1_g000010
rosa_roxburghii	Rroxscaffold_2G00135470
rosa_rugosa	Rorug02G0151200
rosa_samantha	Rh2AG199800 Rh2BG212500 Rh2CG204500 Rh2DG207400
rosa_wichuraiana	Rw2G015900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	420
Acc36I	ACCTGC	1 cut(s)	441
AccBSI	CCGCTC	1 cut(s)	1643
AccI	GTMKAC	2 cut(s)	459, 1844
AccII	CGCG	1 cut(s)	225
AccIII	TCCGGA	1 cut(s)	553
AciI	CCGC	8 cut(s)	54, 217, 220, 225, 532, 900, 1643, 2055
AclWI	GGATC	2 cut(s)	235, 1739
AcoI	YGGCCR	1 cut(s)	2257
AcsI	RAATTY	3 cut(s)	1575, 1864, 2018
AcuI	CTGAAG	2 cut(s)	98, 629
AfaI	GTAC	4 cut(s)	271, 1379, 1445, 2038
AfiI	CCNNNNNNNGG	9 cut(s)	40, 126, 127, 753, 1231, 1232, 1342, 1521, 1973
AflIII	ACRYGT	2 cut(s)	1105, 1440
AjnI	CCWGG	2 cut(s)	501, 1972
AjuI	GAANNNNNNNTTGG	2 cut(s)	131, 163
Alw21I	GWGCWC	1 cut(s)	1417
Alw26I	GTCTC	3 cut(s)	1835, 1848, 2060
AlwI	GGATC	2 cut(s)	235, 1739
Ama87I	CYCGRG	1 cut(s)	1462
Aor13HI	TCCGGA	1 cut(s)	553
AoxI	GGCC	3 cut(s)	497, 2078, 2257
ApeKI	GCWGC	5 cut(s)	563, 844, 1047, 1316, 1759
ApoI	RAATTY	3 cut(s)	1575, 1864, 2018
ArsI	GACNNNNNNTTYG	4 cut(s)	589, 621, 1856, 1888
AspLEI	GCGC	1 cut(s)	225
AspS9I	GGNCC	3 cut(s)	205, 498, 685
AsuC2I	CCSGG	1 cut(s)	35
AsuHPI	GGTGA	6 cut(s)	68, 200, 250, 1126, 1583, 2178
AsuII	TTCGAA	1 cut(s)	114
AvaI	CYCGRG	1 cut(s)	1462
AvaII	GGWCC	2 cut(s)	205, 685
BaeGI	GKGCMC	1 cut(s)	1371
BanII	GRGCYC	1 cut(s)	1926
BauI	CACGAG	2 cut(s)	866, 1502
BbsI	GAAGAC	2 cut(s)	1149, 1731
Bbv12I	GWGCWC	1 cut(s)	1417
BbvI	GCAGC	5 cut(s)	550, 831, 1034, 1303, 1746
BccI	CCATC	6 cut(s)	179, 1447, 1590, 1736, 1952, 2099
BcgI	CGANNNNNNTGC	2 cut(s)	1741, 1775
BciT130I	CCWGG	2 cut(s)	503, 1974
BciVI	GTATCC	2 cut(s)	561, 2229
BcnI	CCSGG	1 cut(s)	35
BcoDI	GTCTC	3 cut(s)	1835, 1848, 2060
BfaI	CTAG	3 cut(s)	663, 1538, 2111
BfmI	CTRYAG	3 cut(s)	845, 1617, 1769
BfuAI	ACCTGC	1 cut(s)	441
BfuI	GTATCC	2 cut(s)	561, 2229
BglII	AGATCT	2 cut(s)	1517, 1817
BlpI	GCTNAGC	1 cut(s)	375
Bme1390I	CCNGG	3 cut(s)	35, 503, 1974
Bme18I	GGWCC	2 cut(s)	205, 685
BmeT110I	CYCGRG	1 cut(s)	1462
BmgT120I	GGNCC	3 cut(s)	205, 498, 685
BmiI	GGNNCC	6 cut(s)	32, 206, 207, 500, 686, 687
BmrFI	CCNGG	3 cut(s)	35, 503, 1974
BmrI	ACTGGG	1 cut(s)	691
BmsI	GCATC	5 cut(s)	519, 1066, 1502, 1520, 1993
BmuI	ACTGGG	1 cut(s)	691
BpiI	GAAGAC	2 cut(s)	1149, 1731
BpmI	CTGGAG	1 cut(s)	831
Bpu1102I	GCTNAGC	1 cut(s)	375
Bpu14I	TTCGAA	1 cut(s)	114
BpuEI	CTTGAG	1 cut(s)	1382
BpuMI	CCSGG	1 cut(s)	35
Bsa29I	ATCGAT	1 cut(s)	2127
BsaAI	YACGTR	1 cut(s)	1441
BsaJI	CCNNGG	3 cut(s)	5, 501, 1161
BsaWI	WCCGGW	1 cut(s)	553
BsaXI	ACNNNNNCTCC	2 cut(s)	1969, 1999
Bsc4I	CCNNNNNNNGG	9 cut(s)	40, 126, 127, 753, 1231, 1232, 1342, 1521, 1973
Bse118I	RCCGGY	2 cut(s)	1568, 1836
Bse1I	ACTGG	8 cut(s)	244, 296, 686, 781, 814, 1347, 1410, 1566
Bse3DI	GCAATG	5 cut(s)	386, 571, 576, 1216, 1427
BseAI	TCCGGA	1 cut(s)	553
BseBI	CCWGG	2 cut(s)	503, 1974
BseCI	ATCGAT	1 cut(s)	2127
BseDI	CCNNGG	3 cut(s)	5, 501, 1161
BseGI	GGATG	7 cut(s)	157, 312, 1081, 1511, 1747, 1894, 2164
BseLI	CCNNNNNNNGG	9 cut(s)	40, 126, 127, 753, 1231, 1232, 1342, 1521, 1973
BseMI	GCAATG	5 cut(s)	386, 571, 576, 1216, 1427
BseMII	CTCAG	2 cut(s)	264, 327
BseNI	ACTGG	8 cut(s)	244, 296, 686, 781, 814, 1347, 1410, 1566
BseRI	GAGGAG	5 cut(s)	101, 146, 188, 1020, 1974
BseSI	GKGCMC	1 cut(s)	1371
BseXI	GCAGC	5 cut(s)	550, 831, 1034, 1303, 1746
Bsh1236I	CGCG	1 cut(s)	225
Bsh1285I	CGRYCG	1 cut(s)	1841
BshFI	GGCC	3 cut(s)	499, 2080, 2259
BshVI	ATCGAT	1 cut(s)	2127
BsiEI	CGRYCG	1 cut(s)	1841
BsiHKAI	GWGCWC	1 cut(s)	1417
BsiHKCI	CYCGRG	1 cut(s)	1462
BsiSI	CCGG	4 cut(s)	34, 554, 1569, 1837
BslFI	GGGAC	6 cut(s)	218, 302, 698, 1004, 1030, 1249
BslI	CCNNNNNNNGG	9 cut(s)	40, 126, 127, 753, 1231, 1232, 1342, 1521, 1973
BsmAI	GTCTC	3 cut(s)	1835, 1848, 2060
BsmFI	GGGAC	6 cut(s)	218, 302, 698, 1004, 1030, 1249
BsmI	GAATGC	2 cut(s)	100, 638
BsnI	GGCC	3 cut(s)	499, 2080, 2259
BsoBI	CYCGRG	1 cut(s)	1462
Bsp119I	TTCGAA	1 cut(s)	114
Bsp1286I	GDGCHC	3 cut(s)	1371, 1417, 1926
Bsp13I	TCCGGA	1 cut(s)	553
Bsp1407I	TGTACA	1 cut(s)	1443
Bsp143I	GATC	5 cut(s)	240, 1477, 1517, 1731, 1817
Bsp1720I	GCTNAGC	1 cut(s)	375
Bsp19I	CCATGG	1 cut(s)	1161
BspACI	CCGC	8 cut(s)	54, 217, 220, 225, 532, 900, 1643, 2055
BspANI	GGCC	3 cut(s)	499, 2080, 2259
BspCNI	CTCAG	2 cut(s)	265, 328
BspDI	ATCGAT	1 cut(s)	2127
BspEI	TCCGGA	1 cut(s)	553
BspFNI	CGCG	1 cut(s)	225
BspLI	GGNNCC	6 cut(s)	32, 206, 207, 500, 686, 687
BspMAI	CTGCAG	1 cut(s)	849
BspMI	ACCTGC	1 cut(s)	441
BspPI	GGATC	2 cut(s)	235, 1739
BspT104I	TTCGAA	1 cut(s)	114
BsrBI	CCGCTC	1 cut(s)	1643
BsrDI	GCAATG	5 cut(s)	386, 571, 576, 1216, 1427
BsrFI	RCCGGY	2 cut(s)	1568, 1836
BsrGI	TGTACA	1 cut(s)	1443
BsrI	ACTGG	8 cut(s)	244, 296, 686, 781, 814, 1347, 1410, 1566
BssAI	RCCGGY	2 cut(s)	1568, 1836
BssECI	CCNNGG	3 cut(s)	5, 501, 1161
BssMI	GATC	5 cut(s)	240, 1477, 1517, 1731, 1817
BssNAI	GTATAC	2 cut(s)	460, 1845
BssSI	CACGAG	2 cut(s)	866, 1502
BssT1I	CCWWGG	2 cut(s)	5, 1161
Bst1107I	GTATAC	2 cut(s)	460, 1845
Bst2BI	CACGAG	2 cut(s)	866, 1502
Bst2UI	CCWGG	2 cut(s)	503, 1974
Bst4CI	ACNGT	3 cut(s)	1187, 1778, 1997
Bst6I	CTCTTC	2 cut(s)	752, 997
BstAUI	TGTACA	1 cut(s)	1443
BstBAI	YACGTR	1 cut(s)	1441
BstBI	TTCGAA	1 cut(s)	114
BstC8I	GCNNGC	7 cut(s)	42, 393, 828, 1045, 1545, 1764, 2078
BstDEI	CTNAG	5 cut(s)	263, 273, 336, 375, 1311
BstDSI	CCRYGG	1 cut(s)	1161
BstEII	GGTNACC	1 cut(s)	1132
BstF5I	GGATG	7 cut(s)	157, 312, 1081, 1511, 1747, 1894, 2164
BstFNI	CGCG	1 cut(s)	225
BstHHI	GCGC	1 cut(s)	225
BstKTI	GATC	5 cut(s)	243, 1480, 1520, 1734, 1820
BstMAI	GTCTC	3 cut(s)	1835, 1848, 2060
BstMBI	GATC	5 cut(s)	240, 1477, 1517, 1731, 1817
BstMCI	CGRYCG	1 cut(s)	1841
BstMWI	GCNNNNNNNGC	4 cut(s)	914, 980, 1053, 1930
BstNI	CCWGG	2 cut(s)	503, 1974
BstNSI	RCATGY	3 cut(s)	1109, 1547, 1766
BstPI	GGTNACC	1 cut(s)	1132
BstSCI	CCNGG	3 cut(s)	33, 501, 1972
BstSFI	CTRYAG	3 cut(s)	845, 1617, 1769
BstSLI	GKGCMC	1 cut(s)	1371
BstUI	CGCG	1 cut(s)	225
BstV1I	GCAGC	5 cut(s)	550, 831, 1034, 1303, 1746
BstV2I	GAAGAC	2 cut(s)	1149, 1731
BstX2I	RGATCY	2 cut(s)	1517, 1817
BstYI	RGATCY	2 cut(s)	1517, 1817
BstZ17I	GTATAC	2 cut(s)	460, 1845
Bsu15I	ATCGAT	1 cut(s)	2127
BsuI	GTATCC	2 cut(s)	561, 2229
BsuRI	GGCC	3 cut(s)	499, 2080, 2259
BsuTUI	ATCGAT	1 cut(s)	2127
BtgI	CCRYGG	1 cut(s)	1161
BtsCI	GGATG	7 cut(s)	157, 312, 1081, 1511, 1747, 1894, 2164
BtsI	GCAGTG	3 cut(s)	439, 1703, 1977
BveI	ACCTGC	1 cut(s)	441
Cac8I	GCNNGC	7 cut(s)	42, 393, 828, 1045, 1545, 1764, 2078
CfoI	GCGC	1 cut(s)	225
Cfr10I	RCCGGY	2 cut(s)	1568, 1836
Cfr13I	GGNCC	3 cut(s)	205, 498, 685
ClaI	ATCGAT	1 cut(s)	2127
CseI	GACGC	1 cut(s)	1275
Csp6I	GTAC	4 cut(s)	270, 1378, 1444, 2037
CspCI	CAANNNNNGTGG	2 cut(s)	1485, 1520
CviQI	GTAC	4 cut(s)	270, 1378, 1444, 2037
DdeI	CTNAG	5 cut(s)	263, 273, 336, 375, 1311
DpnI	GATC	5 cut(s)	242, 1479, 1519, 1733, 1819
DpnII	GATC	5 cut(s)	240, 1477, 1517, 1731, 1817
DraI	TTTAAA	1 cut(s)	1806
EaeI	YGGCCR	1 cut(s)	2257
Eam1104I	CTCTTC	2 cut(s)	752, 997
EarI	CTCTTC	2 cut(s)	752, 997
Eco130I	CCWWGG	2 cut(s)	5, 1161
Eco147I	AGGCCT	1 cut(s)	2080
Eco24I	GRGCYC	1 cut(s)	1926
Eco47I	GGWCC	2 cut(s)	205, 685
Eco57I	CTGAAG	2 cut(s)	98, 629
Eco88I	CYCGRG	1 cut(s)	1462
Eco91I	GGTNACC	1 cut(s)	1132
EcoO109I	RGGNCCY	3 cut(s)	205, 498, 685
EcoO65I	GGTNACC	1 cut(s)	1132
EcoRII	CCWGG	2 cut(s)	501, 1972
EcoT14I	CCWWGG	2 cut(s)	5, 1161
EcoT22I	ATGCAT	4 cut(s)	100, 638, 1495, 1549
EcoT38I	GRGCYC	1 cut(s)	1926
ErhI	CCWWGG	2 cut(s)	5, 1161
FalI	AAGNNNNNCTT	2 cut(s)	1785, 1817
FaqI	GGGAC	6 cut(s)	218, 302, 698, 1004, 1030, 1249
FauI	CCCGC	1 cut(s)	525
FauNDI	CATATG	1 cut(s)	546
FblI	GTMKAC	2 cut(s)	459, 1844
FokI	GGATG	7 cut(s)	164, 319, 1088, 1498, 1754, 1901, 2171
FriOI	GRGCYC	1 cut(s)	1926
FspBI	CTAG	3 cut(s)	663, 1538, 2111
GlaI	GCGC	1 cut(s)	224
GsuI	CTGGAG	1 cut(s)	831
HaeIII	GGCC	3 cut(s)	499, 2080, 2259
HapII	CCGG	4 cut(s)	34, 554, 1569, 1837
HgaI	GACGC	1 cut(s)	1275
HhaI	GCGC	1 cut(s)	225
Hin6I	GCGC	1 cut(s)	223
HinP1I	GCGC	1 cut(s)	223
HindIII	AAGCTT	1 cut(s)	296
HinfI	GANTC	3 cut(s)	2114, 2162, 2171
HpaII	CCGG	4 cut(s)	34, 554, 1569, 1837
HphI	GGTGA	6 cut(s)	68, 200, 250, 1126, 1583, 2178
Hpy166II	GTNNAC	8 cut(s)	279, 333, 460, 1172, 1380, 1444, 1701, 1845
Hpy188I	TCNGA	5 cut(s)	609, 801, 1327, 1792, 2098
Hpy8I	GTNNAC	8 cut(s)	279, 333, 460, 1172, 1380, 1444, 1701, 1845
Hpy99I	CGWCG	1 cut(s)	214
HpyCH4III	ACNGT	3 cut(s)	1187, 1778, 1997
HpyCH4IV	ACGT	2 cut(s)	818, 1440
HpyF10VI	GCNNNNNNNGC	4 cut(s)	914, 980, 1053, 1930
HpyF3I	CTNAG	5 cut(s)	263, 273, 336, 375, 1311
HpySE526I	ACGT	2 cut(s)	818, 1440
HspAI	GCGC	1 cut(s)	223
KflI	GGGWCCC	2 cut(s)	205, 685
Kpn2I	TCCGGA	1 cut(s)	553
Kzo9I	GATC	5 cut(s)	240, 1477, 1517, 1731, 1817
LmnI	GCTCC	6 cut(s)	37, 133, 812, 913, 1987, 2011
Lsp1109I	GCAGC	5 cut(s)	550, 831, 1034, 1303, 1746
LweI	GCATC	5 cut(s)	519, 1066, 1502, 1520, 1993
MaeI	CTAG	3 cut(s)	663, 1538, 2111
MaeII	ACGT	2 cut(s)	818, 1440
MaeIII	GTNAC	5 cut(s)	583, 677, 1083, 1132, 1783
MalI	GATC	5 cut(s)	242, 1479, 1519, 1733, 1819
MbiI	CCGCTC	1 cut(s)	1643
MboI	GATC	5 cut(s)	240, 1477, 1517, 1731, 1817
MfeI	CAATTG	1 cut(s)	1586
MflI	RGATCY	2 cut(s)	1517, 1817
MhlI	GDGCHC	3 cut(s)	1371, 1417, 1926
MluCI	AATT	9 cut(s)	24, 477, 614, 875, 1295, 1575, 1586, 1864, 2018
MlyI	GAGTC	1 cut(s)	2108
MmeI	TCCRAC	2 cut(s)	129, 365
Mph1103I	ATGCAT	4 cut(s)	100, 638, 1495, 1549
MroI	TCCGGA	1 cut(s)	553
MseI	TTAA	4 cut(s)	1656, 1748, 1805, 1811
MslI	CAYNNNNRTG	4 cut(s)	1145, 1179, 1274, 1779
MspA1I	CMGCKG	1 cut(s)	2057
MspI	CCGG	4 cut(s)	34, 554, 1569, 1837
MspR9I	CCNGG	3 cut(s)	35, 503, 1974
MunI	CAATTG	1 cut(s)	1586
Mva1269I	GAATGC	2 cut(s)	100, 638
MvaI	CCWGG	2 cut(s)	503, 1974
MvnI	CGCG	1 cut(s)	225
MwoI	GCNNNNNNNGC	4 cut(s)	914, 980, 1053, 1930
NciI	CCSGG	1 cut(s)	35
NcoI	CCATGG	1 cut(s)	1161
NdeI	CATATG	1 cut(s)	546
NdeII	GATC	5 cut(s)	240, 1477, 1517, 1731, 1817
NlaIV	GGNNCC	6 cut(s)	32, 206, 207, 500, 686, 687
NmeAIII	GCCGAG	1 cut(s)	2235
NmuCI	GTSAC	1 cut(s)	1132
NsiI	ATGCAT	4 cut(s)	100, 638, 1495, 1549
NspI	RCATGY	3 cut(s)	1109, 1547, 1766
NspV	TTCGAA	1 cut(s)	114
PaeI	GCATGC	2 cut(s)	1547, 1766
PceI	AGGCCT	1 cut(s)	2080
PciI	ACATGT	1 cut(s)	1105
PcsI	WCGNNNNNNNCGW	1 cut(s)	1847
PctI	GAATGC	2 cut(s)	100, 638
PfeI	GAWTC	2 cut(s)	2162, 2171
PflFI	GACNNNGTC	1 cut(s)	689
PfoI	TCCNGGA	1 cut(s)	33
PleI	GAGTC	1 cut(s)	2108
PpsI	GAGTC	1 cut(s)	2108
Ppu21I	YACGTR	1 cut(s)	1441
PpuMI	RGGWCCY	2 cut(s)	205, 685
PscI	ACATGT	1 cut(s)	1105
PsiI	TTATAA	1 cut(s)	420
Psp5II	RGGWCCY	2 cut(s)	205, 685
Psp6I	CCWGG	2 cut(s)	501, 1972
PspEI	GGTNACC	1 cut(s)	1132
PspGI	CCWGG	2 cut(s)	501, 1972
PspN4I	GGNNCC	6 cut(s)	32, 206, 207, 500, 686, 687
PspPI	GGNCC	3 cut(s)	205, 498, 685
PspPPI	RGGWCCY	2 cut(s)	205, 685
PstI	CTGCAG	1 cut(s)	849
PsuI	RGATCY	2 cut(s)	1517, 1817
PsyI	GACNNNGTC	1 cut(s)	689
RsaI	GTAC	4 cut(s)	271, 1379, 1445, 2038
RsaNI	GTAC	4 cut(s)	270, 1378, 1444, 2037
RseI	CAYNNNNRTG	4 cut(s)	1145, 1179, 1274, 1779
SaqAI	TTAA	4 cut(s)	1656, 1748, 1805, 1811
Sau3AI	GATC	5 cut(s)	240, 1477, 1517, 1731, 1817
Sau96I	GGNCC	3 cut(s)	205, 498, 685
SchI	GAGTC	1 cut(s)	2108
ScrFI	CCNGG	3 cut(s)	35, 503, 1974
SduI	GDGCHC	3 cut(s)	1371, 1417, 1926
SfaNI	GCATC	5 cut(s)	519, 1066, 1502, 1520, 1993
SfcI	CTRYAG	3 cut(s)	845, 1617, 1769
SfuI	TTCGAA	1 cut(s)	114
SinI	GGWCC	2 cut(s)	205, 685
SmiMI	CAYNNNNRTG	4 cut(s)	1145, 1179, 1274, 1779
SmlI	CTYRAG	1 cut(s)	1397
SmoI	CTYRAG	1 cut(s)	1397
SphI	GCATGC	2 cut(s)	1547, 1766
Sse9I	AATT	9 cut(s)	24, 477, 614, 875, 1295, 1575, 1586, 1864, 2018
SseBI	AGGCCT	1 cut(s)	2080
SsiI	CCGC	8 cut(s)	54, 217, 220, 225, 532, 900, 1643, 2055
SspMI	CTAG	3 cut(s)	663, 1538, 2111
StuI	AGGCCT	1 cut(s)	2080
StyD4I	CCNGG	3 cut(s)	33, 501, 1972
StyI	CCWWGG	2 cut(s)	5, 1161
TaaI	ACNGT	3 cut(s)	1187, 1778, 1997
TaiI	ACGT	2 cut(s)	821, 1443
TaqI	TCGA	8 cut(s)	114, 302, 1624, 1850, 2029, 2117, 2127, 2139
TaqII	GACCGA	1 cut(s)	581
TasI	AATT	9 cut(s)	24, 477, 614, 875, 1295, 1575, 1586, 1864, 2018
TatI	WGTACW	2 cut(s)	1377, 1443
TauI	GCSGC	5 cut(s)	220, 223, 228, 1646, 2057
TfiI	GAWTC	2 cut(s)	2162, 2171
Tru1I	TTAA	4 cut(s)	1656, 1748, 1805, 1811
Tru9I	TTAA	4 cut(s)	1656, 1748, 1805, 1811
TseFI	GTSAC	1 cut(s)	1132
TseI	GCWGC	5 cut(s)	563, 844, 1047, 1316, 1759
Tsp45I	GTSAC	1 cut(s)	1132
Tth111I	GACNNNGTC	1 cut(s)	689
VpaK11BI	GGWCC	2 cut(s)	205, 685
XapI	RAATTY	3 cut(s)	1575, 1864, 2018
XceI	RCATGY	3 cut(s)	1109, 1547, 1766
XmiI	GTMKAC	2 cut(s)	459, 1844
XspI	CTAG	3 cut(s)	663, 1538, 2111
Zsp2I	ATGCAT	4 cut(s)	100, 638, 1495, 1549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.