Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0009080

Physical Location & Seq

Genomic Coordinates Forward (+)

20060240 .. 20184782

Gene Structure 124543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG212500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGTGAGAATAGGGTGTGGGACCCGACAAAGCGGCGGCCAGGGGGAGGTGATTCAGTTTCTTGTTGTGAGGCTTAGTGGTACAGAGTTTGCAATGAGGGACTGGAAGCTTTCGAGGATGATGAAGCAGTCAGGTTTGGAGTTCACTGAGGGTCAGGTTCTGAATGGACTTGGTGCTAAGAAATGTTGGAAACAGGCATTGTCTGTTGTGGAATGGGTTTATAAGGACGGGGGCAATAAACACTGCAAAAGCAGGTTTGTATACACGAAACTTTTGGCAATTCTTGGGAAGGCACGAAGGCCCCAGGAAGCTCTTGACATTTTCAACATGATGCGGGGAGATTGTCATATGTATCCAGATATTGCTGCCTATCATTGCATTGCTGTTACACTCGGTCAAACGGGTCGTCTGAAGGAATTGCTGAAAGTTATTGAATGCATGAGGCAGAAACCTGTCAAAATAGCTAGAAATATGTTTCGTAACTGGGACCCCGTCCTTGAACCCAATGTAGTTGTATATAATGCTATACTGAACGCTTGTGTTCAATCCCGTCAGTGGAAGAGTGTATATTGGGTGTTCAACCAGTTGAGAAAGAGTGGTCTGAAACCTAATGGAGCAACGTATGGGCTTGCTATGGAGGTAATGCTGCAGTCTGGAAAGTTTGACCTCGTGCATGAATTATTTAGAAAAATGAAAAAAAGCGGAGAAGCTCCAAAAGCTCTTACCTATAAAGTTATTGTTAGAGCTTTATGGTGTGAAGGAAAAGTGAATGAAGCTGTGGAAGCAGTCAGGGACATGGAACGAAGAGGAGTGGTTGGGACAAGTGGTGTATATTACGAGTTAGCTTGCTGCCTTTGCAAGAGTGGTAGGTGGCAGGATGCTCTGTTACAGGTTGAGAAGATGAAACATGTATCTAATACTAAACCTTTGGAGGTCACCTTCACAGGCATGATAAGGTCTTCCATGGAGGGTGGACATATTGATGACTGTATATCCATATTTGAACACATGAAGAACCATTGCACCCCTAACATAGGGACAATAAATATGATGTTGAAAGTATTTGGACGCACCGATATGTTTTCCAAAGCTAAAGAATTGTTTGAAGAAACTAAGGCTGCAAAATCTGATTATGACCCTTCACTGGAAGGTGGTGGTAGTTCTCTTGTGCCCGATGAGTACACATATACCTCAATGCTCAAGGCTTCTGCCAGTGCTCTGCAATGGGAATACTTTGAATACGTGTACAAGGAGATGGCTCTCTCGGGATATAAAATAGATCAAAGTAAATATGCATCAATACTCGTGGAAGCATCCAGATCTGGGAAGGGGTATCTACTAGAGCATGCATTTGACACCACACTGGAAGCCGGTGAAATTCCCCATCAATTGTTCTTTATTGAAATGGTATATCAAGCTACAGCTCGACATGATTACAAGAGAGCGGCAACTCTGGTTAATACAATGGCTTATGCCCCATTTCAAGTCAGCGAAAGGCAGTGGACAGATGTTTTTGAGAAAAATGAAGACGGGATCAGTCAGGATGGTTTAACGAAACTGCTGGATGCTCTACAGCACTGTGATGTTACATCGGAAGCCACGCTTTTAAACTTAAAAAGATCTTTGCAAAGTCTCTGCCGGTCGTATACATCGAGAGACTTCTCAAATTCTATGTCAGTATCATCTTTGGATGATAATGATGAGGGATTTGATGATAATGAAGGGCTCATCATGCCAAATCATTCTTTAGAATATATTGATGGTAAGCCCAAGCCTGGCACTGCTCCTCCTGATGACAGTAGTGATGCTCCTTTCAGTGAATTTCTTCATCGAAATAGTACCCAAAGAGGTGTTGCCGCTGATATGGAGACACCTTGCAGGCCTTTGGATTATATTTCTGATGAAGATGGACTAGAATCGACAGAAATCGATGAGGAAATCGAAGCACTGATAAGTAAGGATGATTCTCACGAATCTCATTCGCCCTCACCAAAGGAAATAATGAAAGATTGGAAGGAAAGAAGGAAAAAGCATGGGATACTCATGCCCTTTCAACTCGGCCAAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arf PPR

Protein Analysis

689

Amino Acids

77.91

Weight (kDa)

6.32

Isoelectric Point (pI)

45.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	143 - 274	4.7e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	166 - 214	9.9e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	168 - 208	3.4e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67570
fragaria_vesca	FvH4_1g17780 FvH4_1g17780 FvH4_1g17780 FvH4_1g17891
malus_domestica	MD02G1186800.v1.1
prunus_persica	Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1
pyrus_communis	pycom02g15180
rosa_chinensis	RchiOBHm_Chr2g0108231
rosa_laevigata	RLG00000017648
rosa_multiflora	Rmu_sc0007406.1_g000010
rosa_roxburghii	Rroxscaffold_2G00135470
rosa_rugosa	Rorug02G0151200
rosa_samantha	Rh2AG199800 Rh2BG212500 Rh2CG204500 Rh2DG207400
rosa_wichuraiana	Rw2G015900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	222
Acc36I	ACCTGC	1 cut(s)	243
AccBSI	CCGCTC	1 cut(s)	1445
AccI	GTMKAC	2 cut(s)	261, 1646
AciI	CCGC	6 cut(s)	33, 36, 334, 702, 1445, 1857
AclWI	GGATC	1 cut(s)	1541
AcoI	YGGCCR	2 cut(s)	37, 2059
AcsI	RAATTY	3 cut(s)	1377, 1666, 1820
AcuI	CTGAAG	1 cut(s)	431
AfaI	GTAC	4 cut(s)	82, 1181, 1247, 1840
AfiI	CCNNNNNNNGG	6 cut(s)	46, 555, 1034, 1144, 1323, 1775
AflIII	ACRYGT	2 cut(s)	907, 1242
AjnI	CCWGG	3 cut(s)	39, 303, 1774
Alw21I	GWGCWC	1 cut(s)	1219
Alw26I	GTCTC	3 cut(s)	1637, 1650, 1862
AlwI	GGATC	1 cut(s)	1541
AlwNI	CAGNNNCTG	1 cut(s)	160
Ama87I	CYCGRG	1 cut(s)	1264
AoxI	GGCC	4 cut(s)	37, 299, 1880, 2059
ApeKI	GCWGC	4 cut(s)	365, 646, 849, 1118
ApoI	RAATTY	3 cut(s)	1377, 1666, 1820
ArsI	GACNNNNNNTTYG	4 cut(s)	391, 423, 1658, 1690
Asp700I	GAANNNNTTC	1 cut(s)	1824
AspS9I	GGNCC	3 cut(s)	21, 300, 487
AsuHPI	GGTGA	5 cut(s)	16, 61, 928, 1385, 1980
AvaI	CYCGRG	1 cut(s)	1264
AvaII	GGWCC	2 cut(s)	21, 487
BaeGI	GKGCMC	1 cut(s)	1173
BanII	GRGCYC	1 cut(s)	1728
BauI	CACGAG	2 cut(s)	668, 1304
BbsI	GAAGAC	2 cut(s)	951, 1533
Bbv12I	GWGCWC	1 cut(s)	1219
BbvI	GCAGC	4 cut(s)	352, 633, 836, 1105
BccI	CCATC	5 cut(s)	1249, 1392, 1538, 1754, 1901
BciT130I	CCWGG	3 cut(s)	41, 305, 1776
BciVI	GTATCC	2 cut(s)	363, 2031
BcoDI	GTCTC	3 cut(s)	1637, 1650, 1862
BfaI	CTAG	3 cut(s)	465, 1340, 1913
BfmI	CTRYAG	3 cut(s)	647, 1419, 1571
BfuAI	ACCTGC	1 cut(s)	243
BfuI	GTATCC	2 cut(s)	363, 2031
BglII	AGATCT	2 cut(s)	1319, 1619
BisI	GCNGC	8 cut(s)	34, 37, 366, 647, 850, 1119, 1446, 1857
BlsI	GCNGC	8 cut(s)	35, 38, 367, 648, 851, 1120, 1447, 1858
Bme1390I	CCNGG	3 cut(s)	41, 305, 1776
Bme18I	GGWCC	2 cut(s)	21, 487
BmeT110I	CYCGRG	1 cut(s)	1264
BmgT120I	GGNCC	3 cut(s)	21, 300, 487
BmiI	GGNNCC	5 cut(s)	22, 23, 302, 488, 489
BmrFI	CCNGG	3 cut(s)	41, 305, 1776
BmrI	ACTGGG	1 cut(s)	493
BmsI	GCATC	6 cut(s)	321, 868, 1304, 1322, 1555, 1795
BmuI	ACTGGG	1 cut(s)	493
BpiI	GAAGAC	2 cut(s)	951, 1533
BpuEI	CTTGAG	1 cut(s)	1184
Bsa29I	ATCGAT	1 cut(s)	1929
BsaAI	YACGTR	1 cut(s)	1243
BsaJI	CCNNGG	3 cut(s)	40, 303, 963
BsaXI	ACNNNNNCTCC	2 cut(s)	1771, 1801
Bsc4I	CCNNNNNNNGG	6 cut(s)	46, 555, 1034, 1144, 1323, 1775
Bse118I	RCCGGY	2 cut(s)	1370, 1638
Bse1I	ACTGG	6 cut(s)	107, 488, 583, 1149, 1212, 1368
Bse3DI	GCAATG	5 cut(s)	99, 373, 378, 1018, 1229
BseBI	CCWGG	3 cut(s)	41, 305, 1776
BseCI	ATCGAT	1 cut(s)	1929
BseDI	CCNNGG	3 cut(s)	40, 303, 963
BseGI	GGATG	7 cut(s)	123, 883, 1313, 1549, 1570, 1696, 1966
BseLI	CCNNNNNNNGG	6 cut(s)	46, 555, 1034, 1144, 1323, 1775
BseMI	GCAATG	5 cut(s)	99, 373, 378, 1018, 1229
BseMII	CTCAG	1 cut(s)	138
BseNI	ACTGG	6 cut(s)	107, 488, 583, 1149, 1212, 1368
BseRI	GAGGAG	2 cut(s)	822, 1776
BseSI	GKGCMC	1 cut(s)	1173
BseXI	GCAGC	4 cut(s)	352, 633, 836, 1105
Bsh1285I	CGRYCG	1 cut(s)	1643
BshFI	GGCC	4 cut(s)	39, 301, 1882, 2061
BshVI	ATCGAT	1 cut(s)	1929
BsiEI	CGRYCG	1 cut(s)	1643
BsiHKAI	GWGCWC	1 cut(s)	1219
BsiHKCI	CYCGRG	1 cut(s)	1264
BsiSI	CCGG	2 cut(s)	1371, 1639
BslFI	GGGAC	6 cut(s)	34, 113, 500, 806, 832, 1051
BslI	CCNNNNNNNGG	6 cut(s)	46, 555, 1034, 1144, 1323, 1775
BsmAI	GTCTC	3 cut(s)	1637, 1650, 1862
BsmFI	GGGAC	6 cut(s)	34, 113, 500, 806, 832, 1051
BsmI	GAATGC	1 cut(s)	440
BsnI	GGCC	4 cut(s)	39, 301, 1882, 2061
BsoBI	CYCGRG	1 cut(s)	1264
Bsp1286I	GDGCHC	3 cut(s)	1173, 1219, 1728
Bsp1407I	TGTACA	1 cut(s)	1245
Bsp143I	GATC	4 cut(s)	1279, 1319, 1533, 1619
Bsp19I	CCATGG	1 cut(s)	963
BspACI	CCGC	6 cut(s)	33, 36, 334, 702, 1445, 1857
BspANI	GGCC	4 cut(s)	39, 301, 1882, 2061
BspCNI	CTCAG	1 cut(s)	139
BspDI	ATCGAT	1 cut(s)	1929
BspLI	GGNNCC	5 cut(s)	22, 23, 302, 488, 489
BspMAI	CTGCAG	1 cut(s)	651
BspMI	ACCTGC	1 cut(s)	243
BspPI	GGATC	1 cut(s)	1541
BsrBI	CCGCTC	1 cut(s)	1445
BsrDI	GCAATG	5 cut(s)	99, 373, 378, 1018, 1229
BsrFI	RCCGGY	2 cut(s)	1370, 1638
BsrGI	TGTACA	1 cut(s)	1245
BsrI	ACTGG	6 cut(s)	107, 488, 583, 1149, 1212, 1368
BssAI	RCCGGY	2 cut(s)	1370, 1638
BssECI	CCNNGG	3 cut(s)	40, 303, 963
BssMI	GATC	4 cut(s)	1279, 1319, 1533, 1619
BssNAI	GTATAC	2 cut(s)	262, 1647
BssSI	CACGAG	2 cut(s)	668, 1304
BssT1I	CCWWGG	1 cut(s)	963
Bst1107I	GTATAC	2 cut(s)	262, 1647
Bst2BI	CACGAG	2 cut(s)	668, 1304
Bst2UI	CCWGG	3 cut(s)	41, 305, 1776
Bst4CI	ACNGT	3 cut(s)	989, 1580, 1799
Bst6I	CTCTTC	2 cut(s)	554, 799
BstAUI	TGTACA	1 cut(s)	1245
BstBAI	YACGTR	1 cut(s)	1243
BstC8I	GCNNGC	4 cut(s)	630, 847, 1347, 1880
BstDEI	CTNAG	4 cut(s)	74, 147, 177, 1113
BstDSI	CCRYGG	1 cut(s)	963
BstEII	GGTNACC	1 cut(s)	934
BstENI	CCTNNNNNAGG	1 cut(s)	1032
BstF5I	GGATG	7 cut(s)	123, 883, 1313, 1549, 1570, 1696, 1966
BstKTI	GATC	4 cut(s)	1282, 1322, 1536, 1622
BstMAI	GTCTC	3 cut(s)	1637, 1650, 1862
BstMBI	GATC	4 cut(s)	1279, 1319, 1533, 1619
BstMCI	CGRYCG	1 cut(s)	1643
BstMWI	GCNNNNNNNGC	4 cut(s)	716, 782, 855, 1732
BstNI	CCWGG	3 cut(s)	41, 305, 1776
BstNSI	RCATGY	2 cut(s)	911, 1349
BstPI	GGTNACC	1 cut(s)	934
BstSCI	CCNGG	3 cut(s)	39, 303, 1774
BstSFI	CTRYAG	3 cut(s)	647, 1419, 1571
BstSLI	GKGCMC	1 cut(s)	1173
BstV1I	GCAGC	4 cut(s)	352, 633, 836, 1105
BstV2I	GAAGAC	2 cut(s)	951, 1533
BstX2I	RGATCY	2 cut(s)	1319, 1619
BstYI	RGATCY	2 cut(s)	1319, 1619
BstZ17I	GTATAC	2 cut(s)	262, 1647
Bsu15I	ATCGAT	1 cut(s)	1929
BsuI	GTATCC	2 cut(s)	363, 2031
BsuRI	GGCC	4 cut(s)	39, 301, 1882, 2061
BsuTUI	ATCGAT	1 cut(s)	1929
BtgI	CCRYGG	1 cut(s)	963
BtsCI	GGATG	7 cut(s)	123, 883, 1313, 1549, 1570, 1696, 1966
BtsI	GCAGTG	3 cut(s)	241, 1505, 1779
BveI	ACCTGC	1 cut(s)	243
Cac8I	GCNNGC	4 cut(s)	630, 847, 1347, 1880
CaiI	CAGNNNCTG	1 cut(s)	160
Cfr10I	RCCGGY	2 cut(s)	1370, 1638
Cfr13I	GGNCC	3 cut(s)	21, 300, 487
ClaI	ATCGAT	1 cut(s)	1929
CseI	GACGC	1 cut(s)	1077
Csp6I	GTAC	4 cut(s)	81, 1180, 1246, 1839
CspCI	CAANNNNNGTGG	2 cut(s)	1287, 1322
CviQI	GTAC	4 cut(s)	81, 1180, 1246, 1839
DdeI	CTNAG	4 cut(s)	74, 147, 177, 1113
DpnI	GATC	4 cut(s)	1281, 1321, 1535, 1621
DpnII	GATC	4 cut(s)	1279, 1319, 1533, 1619
DraI	TTTAAA	1 cut(s)	1608
EaeI	YGGCCR	2 cut(s)	37, 2059
Eam1104I	CTCTTC	2 cut(s)	554, 799
EarI	CTCTTC	2 cut(s)	554, 799
Eco130I	CCWWGG	1 cut(s)	963
Eco147I	AGGCCT	1 cut(s)	1882
Eco24I	GRGCYC	1 cut(s)	1728
Eco47I	GGWCC	2 cut(s)	21, 487
Eco57I	CTGAAG	1 cut(s)	431
Eco88I	CYCGRG	1 cut(s)	1264
Eco91I	GGTNACC	1 cut(s)	934
EcoNI	CCTNNNNNAGG	1 cut(s)	1032
EcoO109I	RGGNCCY	3 cut(s)	21, 300, 487
EcoO65I	GGTNACC	1 cut(s)	934
EcoRII	CCWGG	3 cut(s)	39, 303, 1774
EcoT14I	CCWWGG	1 cut(s)	963
EcoT22I	ATGCAT	3 cut(s)	440, 1297, 1351
EcoT38I	GRGCYC	1 cut(s)	1728
ErhI	CCWWGG	1 cut(s)	963
FalI	AAGNNNNNCTT	2 cut(s)	1587, 1619
FaqI	GGGAC	6 cut(s)	34, 113, 500, 806, 832, 1051
FauI	CCCGC	1 cut(s)	327
FauNDI	CATATG	1 cut(s)	348
FblI	GTMKAC	2 cut(s)	261, 1646
Fnu4HI	GCNGC	8 cut(s)	34, 37, 366, 647, 850, 1119, 1446, 1857
FokI	GGATG	7 cut(s)	130, 890, 1300, 1556, 1577, 1703, 1973
FriOI	GRGCYC	1 cut(s)	1728
Fsp4HI	GCNGC	8 cut(s)	34, 37, 366, 647, 850, 1119, 1446, 1857
FspBI	CTAG	3 cut(s)	465, 1340, 1913
GluI	GCNGC	8 cut(s)	34, 37, 366, 647, 850, 1119, 1446, 1857
HaeIII	GGCC	4 cut(s)	39, 301, 1882, 2061
HapII	CCGG	2 cut(s)	1371, 1639
HgaI	GACGC	1 cut(s)	1077
HindIII	AAGCTT	1 cut(s)	107
HinfI	GANTC	4 cut(s)	52, 1916, 1964, 1973
HpaII	CCGG	2 cut(s)	1371, 1639
HphI	GGTGA	5 cut(s)	16, 61, 928, 1385, 1980
Hpy166II	GTNNAC	7 cut(s)	144, 262, 974, 1182, 1246, 1503, 1647
Hpy188I	TCNGA	6 cut(s)	162, 411, 603, 1129, 1594, 1900
Hpy188III	TCNNGA	9 cut(s)	314, 356, 654, 1266, 1317, 1541, 1653, 1790, 1970
Hpy8I	GTNNAC	7 cut(s)	144, 262, 974, 1182, 1246, 1503, 1647
HpyCH4III	ACNGT	3 cut(s)	989, 1580, 1799
HpyCH4IV	ACGT	2 cut(s)	620, 1242
HpyF10VI	GCNNNNNNNGC	4 cut(s)	716, 782, 855, 1732
HpyF3I	CTNAG	4 cut(s)	74, 147, 177, 1113
HpySE526I	ACGT	2 cut(s)	620, 1242
KflI	GGGWCCC	2 cut(s)	21, 487
Kzo9I	GATC	4 cut(s)	1279, 1319, 1533, 1619
LmnI	GCTCC	4 cut(s)	614, 715, 1789, 1813
Lsp1109I	GCAGC	4 cut(s)	352, 633, 836, 1105
LweI	GCATC	6 cut(s)	321, 868, 1304, 1322, 1555, 1795
MaeI	CTAG	3 cut(s)	465, 1340, 1913
MaeII	ACGT	2 cut(s)	620, 1242
MaeIII	GTNAC	5 cut(s)	385, 479, 885, 934, 1585
MalI	GATC	4 cut(s)	1281, 1321, 1535, 1621
MbiI	CCGCTC	1 cut(s)	1445
MboI	GATC	4 cut(s)	1279, 1319, 1533, 1619
MboII	GAAGA	9 cut(s)	571, 816, 910, 951, 1024, 1118, 1538, 1817, 1916
MfeI	CAATTG	1 cut(s)	1388
MflI	RGATCY	2 cut(s)	1319, 1619
MhlI	GDGCHC	3 cut(s)	1173, 1219, 1728
MluCI	AATT	8 cut(s)	279, 416, 677, 1097, 1377, 1388, 1666, 1820
MmeI	TCCRAC	1 cut(s)	167
Mph1103I	ATGCAT	3 cut(s)	440, 1297, 1351
MroXI	GAANNNNTTC	1 cut(s)	1824
MseI	TTAA	4 cut(s)	1458, 1550, 1607, 1613
MslI	CAYNNNNRTG	4 cut(s)	947, 981, 1076, 1581
MspA1I	CMGCKG	1 cut(s)	1859
MspI	CCGG	2 cut(s)	1371, 1639
MspR9I	CCNGG	3 cut(s)	41, 305, 1776
MunI	CAATTG	1 cut(s)	1388
Mva1269I	GAATGC	1 cut(s)	440
MvaI	CCWGG	3 cut(s)	41, 305, 1776
MwoI	GCNNNNNNNGC	4 cut(s)	716, 782, 855, 1732
NcoI	CCATGG	1 cut(s)	963
NdeI	CATATG	1 cut(s)	348
NdeII	GATC	4 cut(s)	1279, 1319, 1533, 1619
NlaIV	GGNNCC	5 cut(s)	22, 23, 302, 488, 489
NmeAIII	GCCGAG	1 cut(s)	2037
NmuCI	GTSAC	1 cut(s)	934
NsiI	ATGCAT	3 cut(s)	440, 1297, 1351
NspI	RCATGY	2 cut(s)	911, 1349
PaeI	GCATGC	1 cut(s)	1349
PceI	AGGCCT	1 cut(s)	1882
PciI	ACATGT	1 cut(s)	907
PcsI	WCGNNNNNNNCGW	1 cut(s)	1649
PctI	GAATGC	1 cut(s)	440
PdmI	GAANNNNTTC	1 cut(s)	1824
PfeI	GAWTC	4 cut(s)	52, 1916, 1964, 1973
PflFI	GACNNNGTC	1 cut(s)	491
PkrI	GCNGC	8 cut(s)	35, 38, 367, 648, 851, 1120, 1447, 1858
Ppu21I	YACGTR	1 cut(s)	1243
PpuMI	RGGWCCY	2 cut(s)	21, 487
PscI	ACATGT	1 cut(s)	907
PsiI	TTATAA	1 cut(s)	222
Psp5II	RGGWCCY	2 cut(s)	21, 487
Psp6I	CCWGG	3 cut(s)	39, 303, 1774
PspEI	GGTNACC	1 cut(s)	934
PspGI	CCWGG	3 cut(s)	39, 303, 1774
PspN4I	GGNNCC	5 cut(s)	22, 23, 302, 488, 489
PspPI	GGNCC	3 cut(s)	21, 300, 487
PspPPI	RGGWCCY	2 cut(s)	21, 487
PstI	CTGCAG	1 cut(s)	651
PstNI	CAGNNNCTG	1 cut(s)	160
PsuI	RGATCY	2 cut(s)	1319, 1619
PsyI	GACNNNGTC	1 cut(s)	491
RsaI	GTAC	4 cut(s)	82, 1181, 1247, 1840
RsaNI	GTAC	4 cut(s)	81, 1180, 1246, 1839
RseI	CAYNNNNRTG	4 cut(s)	947, 981, 1076, 1581
SaqAI	TTAA	4 cut(s)	1458, 1550, 1607, 1613
SatI	GCNGC	8 cut(s)	34, 37, 366, 647, 850, 1119, 1446, 1857
Sau3AI	GATC	4 cut(s)	1279, 1319, 1533, 1619
Sau96I	GGNCC	3 cut(s)	21, 300, 487
ScrFI	CCNGG	3 cut(s)	41, 305, 1776
SduI	GDGCHC	3 cut(s)	1173, 1219, 1728
SfaNI	GCATC	6 cut(s)	321, 868, 1304, 1322, 1555, 1795
SfcI	CTRYAG	3 cut(s)	647, 1419, 1571
SinI	GGWCC	2 cut(s)	21, 487
SmiMI	CAYNNNNRTG	4 cut(s)	947, 981, 1076, 1581
SmlI	CTYRAG	1 cut(s)	1199
SmoI	CTYRAG	1 cut(s)	1199
SphI	GCATGC	1 cut(s)	1349
Sse9I	AATT	8 cut(s)	279, 416, 677, 1097, 1377, 1388, 1666, 1820
SseBI	AGGCCT	1 cut(s)	1882
SsiI	CCGC	6 cut(s)	33, 36, 334, 702, 1445, 1857
SspMI	CTAG	3 cut(s)	465, 1340, 1913
StuI	AGGCCT	1 cut(s)	1882
StyD4I	CCNGG	3 cut(s)	39, 303, 1774
StyI	CCWWGG	1 cut(s)	963
TaaI	ACNGT	3 cut(s)	989, 1580, 1799
TaiI	ACGT	2 cut(s)	623, 1245
TaqI	TCGA	7 cut(s)	113, 1426, 1652, 1831, 1919, 1929, 1941
TaqII	GACCGA	1 cut(s)	383
TasI	AATT	8 cut(s)	279, 416, 677, 1097, 1377, 1388, 1666, 1820
TatI	WGTACW	2 cut(s)	1179, 1245
TauI	GCSGC	4 cut(s)	36, 39, 1448, 1859
TfiI	GAWTC	4 cut(s)	52, 1916, 1964, 1973
Tru1I	TTAA	4 cut(s)	1458, 1550, 1607, 1613
Tru9I	TTAA	4 cut(s)	1458, 1550, 1607, 1613
TseFI	GTSAC	1 cut(s)	934
TseI	GCWGC	4 cut(s)	365, 646, 849, 1118
Tsp45I	GTSAC	1 cut(s)	934
Tth111I	GACNNNGTC	1 cut(s)	491
VpaK11BI	GGWCC	2 cut(s)	21, 487
XagI	CCTNNNNNAGG	1 cut(s)	1032
XapI	RAATTY	3 cut(s)	1377, 1666, 1820
XceI	RCATGY	2 cut(s)	911, 1349
XmiI	GTMKAC	2 cut(s)	261, 1646
XmnI	GAANNNNTTC	1 cut(s)	1824
XspI	CTAG	3 cut(s)	465, 1340, 1913
Zsp2I	ATGCAT	3 cut(s)	440, 1297, 1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.