Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0009080

Physical Location & Seq

Genomic Coordinates Forward (+)

19911783 .. 19938839

Gene Structure 27057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG204500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGGACGGTGCTAAGAAATGTTGGAAACAGGCATTGTCTGTTGTGGAATGGGTTTATAAGGACGGGGGCAATAAACACTGCAAAAGCAGGTTTGTATACACGAAACTTTTGGCAATTCTTGGGAAGGCACGAAGGCCCCAGGAAGCTCTTGACATTTTCAACATGATGCGGGGAGATTGTCATATGTATCCAGATATTGCTGCCTATCATTGCATTGCTGTTACACTCGGTCAAACGGGTCGTCTGAAGGAATTGCTGAAAGTTATTGAATGCATGAGGCAGAAACCTGTCAAAATAGCTAGAAATATGTTTCGTAACTGGGACCCCATCCTTGAACCCAATGTAGTTGTATATAATGCTATACTGAACGCTTGTGTTCAATCCCGTCAGTGGAAGAGTGTATATTGGGTGTTCAACCAGTTGAGAAAGAGTGGTCTGAAACCTAATGGAGCAACGTATGGGCTTGCTATGGAGGTAATGCTGCAGTCTGGAAAGTATGACCTCGTGCATGAATTATTTAGAAAAATGAAAAAAAGCGGAGAAGCTCCAAAAGCTCTTACCTATAAAGTTATTGTTAGAGCTTTATGGTGTGAAGGAAAAGTGAATGAAGCTGTGGAAGCAGTCAGGGACATGGAACGAAGAGGAGTGGTTGGGACAAGTGGTGTATATTACGAGTTAGCTTGCTGCCTTTGCAAGAGTGGGAGGTGGCAGGATGCTCTGTTACAGGTTGAGAAGATGAAACATGTATCTAATACTAAACCTTTGGAGGTCACCTTCACAGGCATGATAAGGTCTTCCATGGAGGGTGGACATATTGATGACTGTATATCCATATTTGAACACATGAAGAACCATTGCACCCCTAACATAGGGACAATAAATACAATGTTGAAAGTATTTGGACGCACCGATATGTTTTCCAAAGCTAAAGAATTGTTTGAAGAAACTAAGGCTGCTGAATCTGATTCTGACCCTTCACTGGAAGGTGGTGGTAGTTCTCTTGTGCCCGATGAGTACACATATACCTCAATGCTCAAGGCATCTGCCAGTGCTCTGCAATGGGAGTACTTTGAATATGTGTACAAGGAGATGGCTCTCTCGGGATATAAAATGGATCAAAGTAAAAATGCATCAATACTCGTAGAAGCATCCAGAGCCGGGAAGGGGTATCTACTAGAGCATGCATTTGACACCACACTGGAAGCCGGTGAAATTCCCCATCAATTGTTCTTTATTGAAATGGTATATCAAGCTACAGCTCGACATGATTACAAGAGAGCGGCAACTCTGGTTAATACAATGGCTTATGCCCCATTTCAAGTCAGCGAAAGGCAGTGGACAGATGTTTTTGAGAAAAATGAAGACGGGATCAGTCAGGATGGTTTAACGAAACTGCTGGATGCTCTACAGCACTGTGATGTAACATCGGAAGCCACGCTTTTAAACTTAAAAAGATCTGTGCAAAGTCTCTGCCGGTCGTATACATCGAGAGACTTCTCAAATTCTATGTCGGAATCATCTTTGGATGATAATGATGAGGGATTTGATGATAATGAAGGGCTCATCATGCCAAATCATTCTTTAGAATATATTGACGGTAAGCCCAAGCCTGGCACTGCTCCTCCTGATGACAGTAGTGATGCTCCTTTCAGTGAATTTCCTCATCGAAATAGTACCCAAAGAGGTGTTGCCGCTGATATAGAGACACCTTGCAGGCCTTTGGATTATATTTCTGATGAAGATGGACTAGACTCGACAGAAATCGATGAGGAAATCGAAGCACTGATAAGTAAGGATGATTCTCACGAATCTCATTCGCCCTCGCCAAAGGAAATAATGAAAGATTGGAAGGAAAGAAGGAAAAAGCATGGGATACTCATGCCCTTTCAACTCGGCCAAAAGCAAGTCAAAGTTGCTTCTTCAGCCAGATCACTTCAGGAGAGGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arf PPR

Protein Analysis

649

Amino Acids

73.36

Weight (kDa)

5.94

Isoelectric Point (pI)

48.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	111 - 158	1.2e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	113 - 154	2.7e-09	PPR repeat family
PPR_long	PF17177	114 - 219	3e-07	Pentacotripeptide-repeat region of PRORP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67570
fragaria_vesca	FvH4_1g17780 FvH4_1g17780 FvH4_1g17780 FvH4_1g17891
malus_domestica	MD02G1186800.v1.1
prunus_persica	Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1
pyrus_communis	pycom02g15180
rosa_chinensis	RchiOBHm_Chr2g0108231
rosa_laevigata	RLG00000017648
rosa_multiflora	Rmu_sc0007406.1_g000010
rosa_roxburghii	Rroxscaffold_2G00135470
rosa_rugosa	Rorug02G0151200
rosa_samantha	Rh2AG199800 Rh2BG212500 Rh2CG204500 Rh2DG207400
rosa_wichuraiana	Rw2G015900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	57
Acc36I	ACCTGC	1 cut(s)	78
AccBSI	CCGCTC	1 cut(s)	1280
AccI	GTMKAC	2 cut(s)	96, 1481
AciI	CCGC	4 cut(s)	169, 537, 1280, 1692
AclWI	GGATC	2 cut(s)	1122, 1376
AcoI	YGGCCR	1 cut(s)	1894
AcsI	RAATTY	3 cut(s)	1212, 1501, 1655
AcuI	CTGAAG	3 cut(s)	266, 1905, 1919
AfaI	GTAC	4 cut(s)	1016, 1067, 1082, 1675
AfiI	CCNNNNNNNGG	6 cut(s)	390, 869, 979, 1158, 1164, 1610
AflIII	ACRYGT	1 cut(s)	742
AjnI	CCWGG	2 cut(s)	138, 1609
Alw21I	GWGCWC	1 cut(s)	1054
Alw26I	GTCTC	3 cut(s)	1472, 1485, 1697
AlwI	GGATC	2 cut(s)	1122, 1376
Ama87I	CYCGRG	1 cut(s)	1099
AoxI	GGCC	3 cut(s)	134, 1715, 1894
ApeKI	GCWGC	4 cut(s)	200, 481, 684, 953
ApoI	RAATTY	3 cut(s)	1212, 1501, 1655
ArsI	GACNNNNNNTTYG	4 cut(s)	226, 258, 1493, 1525
AspS9I	GGNCC	2 cut(s)	135, 322
AsuC2I	CCSGG	1 cut(s)	1159
AsuHPI	GGTGA	2 cut(s)	763, 1220
AvaI	CYCGRG	1 cut(s)	1099
AvaII	GGWCC	1 cut(s)	322
BaeGI	GKGCMC	1 cut(s)	1008
BanII	GRGCYC	1 cut(s)	1563
BauI	CACGAG	1 cut(s)	503
BbsI	GAAGAC	2 cut(s)	786, 1368
Bbv12I	GWGCWC	1 cut(s)	1054
BbvI	GCAGC	4 cut(s)	187, 468, 671, 940
BccI	CCATC	5 cut(s)	335, 1084, 1227, 1373, 1736
BciT130I	CCWGG	2 cut(s)	140, 1611
BciVI	GTATCC	2 cut(s)	198, 1866
BcnI	CCSGG	1 cut(s)	1159
BcoDI	GTCTC	3 cut(s)	1472, 1485, 1697
BfaI	CTAG	3 cut(s)	300, 1175, 1748
BfmI	CTRYAG	3 cut(s)	482, 1254, 1406
BfuAI	ACCTGC	1 cut(s)	78
BfuI	GTATCC	2 cut(s)	198, 1866
BglII	AGATCT	1 cut(s)	1454
BisI	GCNGC	6 cut(s)	201, 482, 685, 954, 1281, 1692
BlsI	GCNGC	6 cut(s)	202, 483, 686, 955, 1282, 1693
BmcAI	AGTACT	1 cut(s)	1067
Bme1390I	CCNGG	3 cut(s)	140, 1159, 1611
Bme18I	GGWCC	1 cut(s)	322
BmeT110I	CYCGRG	1 cut(s)	1099
BmgT120I	GGNCC	2 cut(s)	135, 322
BmiI	GGNNCC	3 cut(s)	137, 323, 324
BmrFI	CCNGG	3 cut(s)	140, 1159, 1611
BmrI	ACTGGG	1 cut(s)	328
BmsI	GCATC	7 cut(s)	156, 703, 1049, 1139, 1157, 1390, 1630
BmuI	ACTGGG	1 cut(s)	328
BpiI	GAAGAC	2 cut(s)	786, 1368
BpuEI	CTTGAG	1 cut(s)	1019
BpuMI	CCSGG	1 cut(s)	1159
Bsa29I	ATCGAT	1 cut(s)	1764
BsaJI	CCNNGG	2 cut(s)	138, 798
BsaXI	ACNNNNNCTCC	2 cut(s)	1606, 1636
Bsc4I	CCNNNNNNNGG	6 cut(s)	390, 869, 979, 1158, 1164, 1610
Bse118I	RCCGGY	2 cut(s)	1205, 1473
Bse1I	ACTGG	5 cut(s)	323, 418, 984, 1047, 1203
Bse3DI	GCAATG	4 cut(s)	208, 213, 853, 1064
BseBI	CCWGG	2 cut(s)	140, 1611
BseCI	ATCGAT	1 cut(s)	1764
BseDI	CCNNGG	2 cut(s)	138, 798
BseGI	GGATG	7 cut(s)	327, 718, 1148, 1384, 1405, 1531, 1801
BseLI	CCNNNNNNNGG	6 cut(s)	390, 869, 979, 1158, 1164, 1610
BseMI	GCAATG	4 cut(s)	208, 213, 853, 1064
BseNI	ACTGG	5 cut(s)	323, 418, 984, 1047, 1203
BseRI	GAGGAG	2 cut(s)	657, 1611
BseSI	GKGCMC	1 cut(s)	1008
BseXI	GCAGC	4 cut(s)	187, 468, 671, 940
Bsh1285I	CGRYCG	1 cut(s)	1478
BshFI	GGCC	3 cut(s)	136, 1717, 1896
BshVI	ATCGAT	1 cut(s)	1764
BsiEI	CGRYCG	1 cut(s)	1478
BsiHKAI	GWGCWC	1 cut(s)	1054
BsiHKCI	CYCGRG	1 cut(s)	1099
BsiSI	CCGG	3 cut(s)	1158, 1206, 1474
BslFI	GGGAC	4 cut(s)	335, 641, 667, 886
BslI	CCNNNNNNNGG	6 cut(s)	390, 869, 979, 1158, 1164, 1610
BsmAI	GTCTC	3 cut(s)	1472, 1485, 1697
BsmFI	GGGAC	4 cut(s)	335, 641, 667, 886
BsmI	GAATGC	1 cut(s)	275
BsnI	GGCC	3 cut(s)	136, 1717, 1896
BsoBI	CYCGRG	1 cut(s)	1099
Bsp1286I	GDGCHC	3 cut(s)	1008, 1054, 1563
Bsp1407I	TGTACA	1 cut(s)	1080
Bsp143I	GATC	4 cut(s)	1114, 1368, 1454, 1928
Bsp19I	CCATGG	1 cut(s)	798
BspACI	CCGC	4 cut(s)	169, 537, 1280, 1692
BspANI	GGCC	3 cut(s)	136, 1717, 1896
BspDI	ATCGAT	1 cut(s)	1764
BspLI	GGNNCC	3 cut(s)	137, 323, 324
BspMAI	CTGCAG	1 cut(s)	486
BspMI	ACCTGC	1 cut(s)	78
BspPI	GGATC	2 cut(s)	1122, 1376
BsrBI	CCGCTC	1 cut(s)	1280
BsrDI	GCAATG	4 cut(s)	208, 213, 853, 1064
BsrFI	RCCGGY	2 cut(s)	1205, 1473
BsrGI	TGTACA	1 cut(s)	1080
BsrI	ACTGG	5 cut(s)	323, 418, 984, 1047, 1203
BssAI	RCCGGY	2 cut(s)	1205, 1473
BssECI	CCNNGG	2 cut(s)	138, 798
BssMI	GATC	4 cut(s)	1114, 1368, 1454, 1928
BssNAI	GTATAC	2 cut(s)	97, 1482
BssSI	CACGAG	1 cut(s)	503
BssT1I	CCWWGG	1 cut(s)	798
Bst1107I	GTATAC	2 cut(s)	97, 1482
Bst2BI	CACGAG	1 cut(s)	503
Bst2UI	CCWGG	2 cut(s)	140, 1611
Bst4CI	ACNGT	5 cut(s)	8, 824, 1415, 1598, 1634
Bst6I	CTCTTC	2 cut(s)	389, 634
BstAUI	TGTACA	1 cut(s)	1080
BstC8I	GCNNGC	4 cut(s)	465, 682, 1182, 1715
BstDEI	CTNAG	2 cut(s)	12, 948
BstDSI	CCRYGG	1 cut(s)	798
BstEII	GGTNACC	1 cut(s)	769
BstENI	CCTNNNNNAGG	1 cut(s)	867
BstF5I	GGATG	7 cut(s)	327, 718, 1148, 1384, 1405, 1531, 1801
BstKTI	GATC	4 cut(s)	1117, 1371, 1457, 1931
BstMAI	GTCTC	3 cut(s)	1472, 1485, 1697
BstMBI	GATC	4 cut(s)	1114, 1368, 1454, 1928
BstMCI	CGRYCG	1 cut(s)	1478
BstMWI	GCNNNNNNNGC	6 cut(s)	551, 617, 690, 1154, 1567, 1922
BstNI	CCWGG	2 cut(s)	140, 1611
BstNSI	RCATGY	2 cut(s)	746, 1184
BstPI	GGTNACC	1 cut(s)	769
BstSCI	CCNGG	3 cut(s)	138, 1157, 1609
BstSFI	CTRYAG	3 cut(s)	482, 1254, 1406
BstSLI	GKGCMC	1 cut(s)	1008
BstV1I	GCAGC	4 cut(s)	187, 468, 671, 940
BstV2I	GAAGAC	2 cut(s)	786, 1368
BstX2I	RGATCY	1 cut(s)	1454
BstYI	RGATCY	1 cut(s)	1454
BstZ17I	GTATAC	2 cut(s)	97, 1482
Bsu15I	ATCGAT	1 cut(s)	1764
BsuI	GTATCC	2 cut(s)	198, 1866
BsuRI	GGCC	3 cut(s)	136, 1717, 1896
BsuTUI	ATCGAT	1 cut(s)	1764
BtgI	CCRYGG	1 cut(s)	798
BtsCI	GGATG	7 cut(s)	327, 718, 1148, 1384, 1405, 1531, 1801
BtsI	GCAGTG	3 cut(s)	76, 1340, 1614
BveI	ACCTGC	1 cut(s)	78
Cac8I	GCNNGC	4 cut(s)	465, 682, 1182, 1715
Cfr10I	RCCGGY	2 cut(s)	1205, 1473
Cfr13I	GGNCC	2 cut(s)	135, 322
ClaI	ATCGAT	1 cut(s)	1764
CseI	GACGC	1 cut(s)	912
Csp6I	GTAC	4 cut(s)	1015, 1066, 1081, 1674
CviQI	GTAC	4 cut(s)	1015, 1066, 1081, 1674
DdeI	CTNAG	2 cut(s)	12, 948
DpnI	GATC	4 cut(s)	1116, 1370, 1456, 1930
DpnII	GATC	4 cut(s)	1114, 1368, 1454, 1928
DraI	TTTAAA	1 cut(s)	1443
EaeI	YGGCCR	1 cut(s)	1894
Eam1104I	CTCTTC	2 cut(s)	389, 634
EarI	CTCTTC	2 cut(s)	389, 634
Eco130I	CCWWGG	1 cut(s)	798
Eco147I	AGGCCT	1 cut(s)	1717
Eco24I	GRGCYC	1 cut(s)	1563
Eco47I	GGWCC	1 cut(s)	322
Eco57I	CTGAAG	3 cut(s)	266, 1905, 1919
Eco88I	CYCGRG	1 cut(s)	1099
Eco91I	GGTNACC	1 cut(s)	769
EcoNI	CCTNNNNNAGG	1 cut(s)	867
EcoO109I	RGGNCCY	2 cut(s)	135, 322
EcoO65I	GGTNACC	1 cut(s)	769
EcoRII	CCWGG	2 cut(s)	138, 1609
EcoT14I	CCWWGG	1 cut(s)	798
EcoT22I	ATGCAT	3 cut(s)	275, 1132, 1186
EcoT38I	GRGCYC	1 cut(s)	1563
ErhI	CCWWGG	1 cut(s)	798
FalI	AAGNNNNNCTT	2 cut(s)	1422, 1454
FaqI	GGGAC	4 cut(s)	335, 641, 667, 886
FauI	CCCGC	1 cut(s)	162
FauNDI	CATATG	1 cut(s)	183
FblI	GTMKAC	2 cut(s)	96, 1481
Fnu4HI	GCNGC	6 cut(s)	201, 482, 685, 954, 1281, 1692
FokI	GGATG	7 cut(s)	314, 725, 1135, 1391, 1412, 1538, 1808
FriOI	GRGCYC	1 cut(s)	1563
Fsp4HI	GCNGC	6 cut(s)	201, 482, 685, 954, 1281, 1692
FspBI	CTAG	3 cut(s)	300, 1175, 1748
GluI	GCNGC	6 cut(s)	201, 482, 685, 954, 1281, 1692
HaeIII	GGCC	3 cut(s)	136, 1717, 1896
HapII	CCGG	3 cut(s)	1158, 1206, 1474
HgaI	GACGC	1 cut(s)	912
HinfI	GANTC	6 cut(s)	959, 965, 1514, 1751, 1799, 1808
HpaII	CCGG	3 cut(s)	1158, 1206, 1474
HphI	GGTGA	2 cut(s)	763, 1220
Hpy166II	GTNNAC	6 cut(s)	97, 809, 1017, 1081, 1338, 1482
Hpy188I	TCNGA	7 cut(s)	246, 438, 964, 970, 1429, 1513, 1735
Hpy8I	GTNNAC	6 cut(s)	97, 809, 1017, 1081, 1338, 1482
HpyCH4III	ACNGT	5 cut(s)	8, 824, 1415, 1598, 1634
HpyCH4IV	ACGT	1 cut(s)	455
HpyF10VI	GCNNNNNNNGC	6 cut(s)	551, 617, 690, 1154, 1567, 1922
HpyF3I	CTNAG	2 cut(s)	12, 948
HpySE526I	ACGT	1 cut(s)	455
KflI	GGGWCCC	1 cut(s)	322
Kzo9I	GATC	4 cut(s)	1114, 1368, 1454, 1928
LmnI	GCTCC	4 cut(s)	449, 550, 1624, 1648
Lsp1109I	GCAGC	4 cut(s)	187, 468, 671, 940
LweI	GCATC	7 cut(s)	156, 703, 1049, 1139, 1157, 1390, 1630
MaeI	CTAG	3 cut(s)	300, 1175, 1748
MaeII	ACGT	1 cut(s)	455
MaeIII	GTNAC	5 cut(s)	220, 314, 720, 769, 1420
MalI	GATC	4 cut(s)	1116, 1370, 1456, 1930
MbiI	CCGCTC	1 cut(s)	1280
MboI	GATC	4 cut(s)	1114, 1368, 1454, 1928
MboII	GAAGA	9 cut(s)	406, 651, 745, 786, 859, 953, 1373, 1751, 1911
MfeI	CAATTG	1 cut(s)	1223
MflI	RGATCY	1 cut(s)	1454
MhlI	GDGCHC	3 cut(s)	1008, 1054, 1563
MluCI	AATT	8 cut(s)	114, 251, 512, 932, 1212, 1223, 1501, 1655
MlyI	GAGTC	1 cut(s)	1745
MmeI	TCCRAC	1 cut(s)	1491
Mph1103I	ATGCAT	3 cut(s)	275, 1132, 1186
MseI	TTAA	4 cut(s)	1293, 1385, 1442, 1448
MslI	CAYNNNNRTG	4 cut(s)	782, 816, 911, 1416
MspA1I	CMGCKG	1 cut(s)	1694
MspI	CCGG	3 cut(s)	1158, 1206, 1474
MspR9I	CCNGG	3 cut(s)	140, 1159, 1611
MunI	CAATTG	1 cut(s)	1223
Mva1269I	GAATGC	1 cut(s)	275
MvaI	CCWGG	2 cut(s)	140, 1611
MwoI	GCNNNNNNNGC	6 cut(s)	551, 617, 690, 1154, 1567, 1922
NciI	CCSGG	1 cut(s)	1159
NcoI	CCATGG	1 cut(s)	798
NdeI	CATATG	1 cut(s)	183
NdeII	GATC	4 cut(s)	1114, 1368, 1454, 1928
NlaIV	GGNNCC	3 cut(s)	137, 323, 324
NmeAIII	GCCGAG	1 cut(s)	1872
NmuCI	GTSAC	1 cut(s)	769
NsiI	ATGCAT	3 cut(s)	275, 1132, 1186
NspI	RCATGY	2 cut(s)	746, 1184
PaeI	GCATGC	1 cut(s)	1184
PceI	AGGCCT	1 cut(s)	1717
PciI	ACATGT	1 cut(s)	742
PcsI	WCGNNNNNNNCGW	1 cut(s)	1484
PctI	GAATGC	1 cut(s)	275
PfeI	GAWTC	5 cut(s)	959, 965, 1514, 1799, 1808
PkrI	GCNGC	6 cut(s)	202, 483, 686, 955, 1282, 1693
PleI	GAGTC	1 cut(s)	1745
PpsI	GAGTC	1 cut(s)	1745
PpuMI	RGGWCCY	1 cut(s)	322
PscI	ACATGT	1 cut(s)	742
PsiI	TTATAA	1 cut(s)	57
Psp5II	RGGWCCY	1 cut(s)	322
Psp6I	CCWGG	2 cut(s)	138, 1609
PspEI	GGTNACC	1 cut(s)	769
PspGI	CCWGG	2 cut(s)	138, 1609
PspN4I	GGNNCC	3 cut(s)	137, 323, 324
PspPI	GGNCC	2 cut(s)	135, 322
PspPPI	RGGWCCY	1 cut(s)	322
PstI	CTGCAG	1 cut(s)	486
PsuI	RGATCY	1 cut(s)	1454
RsaI	GTAC	4 cut(s)	1016, 1067, 1082, 1675
RsaNI	GTAC	4 cut(s)	1015, 1066, 1081, 1674
RseI	CAYNNNNRTG	4 cut(s)	782, 816, 911, 1416
SaqAI	TTAA	4 cut(s)	1293, 1385, 1442, 1448
SatI	GCNGC	6 cut(s)	201, 482, 685, 954, 1281, 1692
Sau3AI	GATC	4 cut(s)	1114, 1368, 1454, 1928
Sau96I	GGNCC	2 cut(s)	135, 322
ScaI	AGTACT	1 cut(s)	1067
SchI	GAGTC	1 cut(s)	1745
ScrFI	CCNGG	3 cut(s)	140, 1159, 1611
SduI	GDGCHC	3 cut(s)	1008, 1054, 1563
SfaNI	GCATC	7 cut(s)	156, 703, 1049, 1139, 1157, 1390, 1630
SfcI	CTRYAG	3 cut(s)	482, 1254, 1406
SinI	GGWCC	1 cut(s)	322
SmiMI	CAYNNNNRTG	4 cut(s)	782, 816, 911, 1416
SmlI	CTYRAG	1 cut(s)	1034
SmoI	CTYRAG	1 cut(s)	1034
SphI	GCATGC	1 cut(s)	1184
Sse9I	AATT	8 cut(s)	114, 251, 512, 932, 1212, 1223, 1501, 1655
SseBI	AGGCCT	1 cut(s)	1717
SsiI	CCGC	4 cut(s)	169, 537, 1280, 1692
SspMI	CTAG	3 cut(s)	300, 1175, 1748
StuI	AGGCCT	1 cut(s)	1717
StyD4I	CCNGG	3 cut(s)	138, 1157, 1609
StyI	CCWWGG	1 cut(s)	798
TaaI	ACNGT	5 cut(s)	8, 824, 1415, 1598, 1634
TaiI	ACGT	1 cut(s)	458
TaqI	TCGA	6 cut(s)	1261, 1487, 1666, 1754, 1764, 1776
TaqII	GACCGA	1 cut(s)	218
TasI	AATT	8 cut(s)	114, 251, 512, 932, 1212, 1223, 1501, 1655
TatI	WGTACW	3 cut(s)	1014, 1065, 1080
TauI	GCSGC	2 cut(s)	1283, 1694
TfiI	GAWTC	5 cut(s)	959, 965, 1514, 1799, 1808
Tru1I	TTAA	4 cut(s)	1293, 1385, 1442, 1448
Tru9I	TTAA	4 cut(s)	1293, 1385, 1442, 1448
TseFI	GTSAC	1 cut(s)	769
TseI	GCWGC	4 cut(s)	200, 481, 684, 953
Tsp45I	GTSAC	1 cut(s)	769
TspDTI	ATGAA	9 cut(s)	525, 542, 621, 752, 860, 1374, 1569, 1752, 1853
VpaK11BI	GGWCC	1 cut(s)	322
XagI	CCTNNNNNAGG	1 cut(s)	867
XapI	RAATTY	3 cut(s)	1212, 1501, 1655
XceI	RCATGY	2 cut(s)	746, 1184
XmiI	GTMKAC	2 cut(s)	96, 1481
XspI	CTAG	3 cut(s)	300, 1175, 1748
ZrmI	AGTACT	1 cut(s)	1067
Zsp2I	ATGCAT	3 cut(s)	275, 1132, 1186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.