Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0009080

Physical Location & Seq

Genomic Coordinates Forward (+)

20181164 .. 20225553

Gene Structure 44390 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG199800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGTGAGAATAGGGTGTGGGACCCGACAAAGCGGCGGCGAGGGGGAGGTGATTCAGTTTCTTGTTGAGAGGCTTAGTGGTACAGAGTTTGCAATGAGGGACTGGAAGCTTTCGAGGATGATGAAGCAGTCAGGTTTGGAGTTCACTGAGGGTCAGGTTCTTAAGGTTCTGAATGGACTTGGTGCTAAGAAATGTTGGAAACAGGCATTGTCTGTTGTGGAATGGGTTTATAAGGACAGGGGCAATAAACATTGCAAAAGCAGGTTTGTATACACGAAACTTTTGGCAATTCTTGGGAAGGCACGAAGGCCCCAGGAAGCTCTTGACATTTTCAACATGATGCGGGGAGAATGTCATATGTATCCGGATATTGCTGCCTATCATAGCATTGCTGTTACACTCGGTCAAACGGGTCGTCTGAAGGAATTGCTGAAAGTTATTGAATGCATGAGGCAGAAACCTGTCAAAATAGATAGAAATATGTTTCGCAACTGGGACCCCATCCTTGAACCCGACGTAGTTGTGTATAATGCTATACTGAACGCTTGTGTTCAATCCCATCAGTGGAAGAGTGTATATTGGGTGTTCAACCAGTTGAGAAAGAGTGGTCTGAAACCTAATGGAGCAACATATGGGCTTGCTATGGAGGTAATGCTGCAGTCTGGAAAGTATGACCTCGTGCATGAATTATTTAGAAAAATGAAAAAAAGCGGAGAAGCTCCGAAAGCTCTTACCTATAAAGTTATTGTTAGAGCTTTATGGTGTGAAGGAAAAGTGAATGAAGCTGTGGAAGCAGTCAGGGACATGGAACGAAGGGGAGTGGTTGGGACAAGTGGTGTATATTACGAGTTAGCTTGCTGCCTTTGCAAGAGTGGTAGGTGGCAGGATGCTCTGTTACAGGTTGAGAAGATGAAACATGTATCTAATACTAAACCTTTGGAGGTCACCTTCACAGGCATGATAAGGTCTTCCATGGAGGGTGGACATATTGATGACTGTATATCCATATTTGAACACATGAAGAACCATTGCACCCCTAACATAGGGACAATAAATACAATGTTGAAAGTATTTGGACGCACCGATATGTTTTCCAAAGCTAAAGAATTGTTTGAAGAAACTAAGGCTGCTGAATCTGATTCTGACCCTTCACTGGAAGGTGGTGGTAGTTCTCTTGTGCCCGATGAGTACACATATACCTCAATGCTCAAGGCATCTGCCAGTGCTCTGCAATGGGAATACTTTGAATATGTGTACAAGGAGATGGCTCTCTCGGGATATAAAATAGATCAAAGTAAAAATGCATCAATACTCGTAGAAGCATCCAGAGCCGGGAAGGGGTATCTACTAGAGCATGCATTTGACACCACACTGGAAGCCGGTGAAATTCCCCATCAATTGTTCTTTATTGAAATGGTATATCAAGCTACAGCTCGACATGATTACAAGAGAGCGGCAACTCTGGTTAATACAATGGCTTATGCCCCATTTCAAGTCAGCGAAAGGCATTGGACAGATGTTTTTGAGAAAAATGAAGACGGGATCAGTCAGGATGGTTTAACAAAACTGCTGGATGCTCTACAGCACTGTGATGTTACATCGGAAGCCACGCTCTTAAACTTAAAAAGATCTCTGCAAAGTCTCTGCCGGTCGTATACATCGAGAGACTTCTCAAATTCTATGTCAGTATCATCTTTGGATGATAATGATGAGGGATTTGATGATAATGAAGGGCTCATCATGCCAAATCATTCTTTAGAATATATTGATGGTAAGCCCAAGCCTGGCACTGCTCCTCCTGATGACAGTAGTGATGCTCCTTTCAGTGAATTTCCTCATCGAAATAGTACCCAAAGAGGTGTTGCCGCTGATATAGAGACACCTTGCAGGCCTTTGGATTATATTTCTGATGAAGATGGACTAGACTCGACAGAAATCGATGAGGAAATCGAAGCACTGATAAGTAAGGATGATTCTCACGAATCTCATTCGCCCTCACCAAAGGAAATAATGAAAGATTGGAAGGAAAGAAGGAAAAAGCATGGGATACTCATGCCCTTTCAACTCGGCCAAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arf PPR

Protein Analysis

692

Amino Acids

78.23

Weight (kDa)

6.01

Isoelectric Point (pI)

44.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	169 - 216	6.2e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	171 - 212	5.3e-09	PPR repeat family
PPR_long	PF17177	175 - 277	7e-07	Pentacotripeptide-repeat region of PRORP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009080)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67570
fragaria_vesca	FvH4_1g17780 FvH4_1g17780 FvH4_1g17780 FvH4_1g17891
malus_domestica	MD02G1186800.v1.1
prunus_persica	Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1 Prupe.6G219900_v2.0.a1
pyrus_communis	pycom02g15180
rosa_chinensis	RchiOBHm_Chr2g0108231
rosa_laevigata	RLG00000017648
rosa_multiflora	Rmu_sc0007406.1_g000010
rosa_roxburghii	Rroxscaffold_2G00135470
rosa_rugosa	Rorug02G0151200
rosa_samantha	Rh2AG199800 Rh2BG212500 Rh2CG204500 Rh2DG207400
rosa_wichuraiana	Rw2G015900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	231
Acc36I	ACCTGC	1 cut(s)	252
AccBSI	CCGCTC	1 cut(s)	1454
AccI	GTMKAC	2 cut(s)	270, 1655
AccIII	TCCGGA	1 cut(s)	364
AciI	CCGC	6 cut(s)	33, 36, 343, 711, 1454, 1866
AclWI	GGATC	1 cut(s)	1550
AcoI	YGGCCR	1 cut(s)	2068
AcsI	RAATTY	3 cut(s)	1386, 1675, 1829
AcuI	CTGAAG	1 cut(s)	440
AfaI	GTAC	4 cut(s)	82, 1190, 1256, 1849
AfiI	CCNNNNNNNGG	6 cut(s)	564, 1043, 1153, 1332, 1338, 1784
AflII	CTTAAG	1 cut(s)	161
AflIII	ACRYGT	1 cut(s)	916
AjnI	CCWGG	2 cut(s)	312, 1783
Alw21I	GWGCWC	1 cut(s)	1228
Alw26I	GTCTC	3 cut(s)	1646, 1659, 1871
AlwI	GGATC	1 cut(s)	1550
Ama87I	CYCGRG	1 cut(s)	1273
Aor13HI	TCCGGA	1 cut(s)	364
AoxI	GGCC	3 cut(s)	308, 1889, 2068
ApeKI	GCWGC	4 cut(s)	374, 655, 858, 1127
ApoI	RAATTY	3 cut(s)	1386, 1675, 1829
ArsI	GACNNNNNNTTYG	4 cut(s)	400, 432, 1667, 1699
AspS9I	GGNCC	3 cut(s)	21, 309, 496
AsuC2I	CCSGG	1 cut(s)	1333
AsuHPI	GGTGA	5 cut(s)	16, 61, 937, 1394, 1989
AvaI	CYCGRG	1 cut(s)	1273
AvaII	GGWCC	2 cut(s)	21, 496
BaeGI	GKGCMC	1 cut(s)	1182
BanII	GRGCYC	1 cut(s)	1737
BauI	CACGAG	1 cut(s)	677
BbsI	GAAGAC	2 cut(s)	960, 1542
Bbv12I	GWGCWC	1 cut(s)	1228
BbvI	GCAGC	4 cut(s)	361, 642, 845, 1114
BccI	CCATC	7 cut(s)	509, 567, 1258, 1401, 1547, 1763, 1910
BciT130I	CCWGG	2 cut(s)	314, 1785
BciVI	GTATCC	2 cut(s)	372, 2040
BcnI	CCSGG	1 cut(s)	1333
BcoDI	GTCTC	3 cut(s)	1646, 1659, 1871
BfaI	CTAG	2 cut(s)	1349, 1922
BfmI	CTRYAG	3 cut(s)	656, 1428, 1580
BfrI	CTTAAG	1 cut(s)	161
BfuAI	ACCTGC	1 cut(s)	252
BfuI	GTATCC	2 cut(s)	372, 2040
BglII	AGATCT	1 cut(s)	1628
BisI	GCNGC	8 cut(s)	34, 37, 375, 656, 859, 1128, 1455, 1866
BlsI	GCNGC	8 cut(s)	35, 38, 376, 657, 860, 1129, 1456, 1867
Bme1390I	CCNGG	3 cut(s)	314, 1333, 1785
Bme18I	GGWCC	2 cut(s)	21, 496
BmeT110I	CYCGRG	1 cut(s)	1273
BmgT120I	GGNCC	3 cut(s)	21, 309, 496
BmiI	GGNNCC	5 cut(s)	22, 23, 311, 497, 498
BmrFI	CCNGG	3 cut(s)	314, 1333, 1785
BmrI	ACTGGG	1 cut(s)	502
BmsI	GCATC	7 cut(s)	330, 877, 1223, 1313, 1331, 1564, 1804
BmuI	ACTGGG	1 cut(s)	502
BpiI	GAAGAC	2 cut(s)	960, 1542
BpuEI	CTTGAG	1 cut(s)	1193
BpuMI	CCSGG	1 cut(s)	1333
Bsa29I	ATCGAT	1 cut(s)	1938
BsaJI	CCNNGG	2 cut(s)	312, 972
BsaWI	WCCGGW	1 cut(s)	364
BsaXI	ACNNNNNCTCC	2 cut(s)	1780, 1810
Bsc4I	CCNNNNNNNGG	6 cut(s)	564, 1043, 1153, 1332, 1338, 1784
Bse118I	RCCGGY	2 cut(s)	1379, 1647
Bse1I	ACTGG	6 cut(s)	107, 497, 592, 1158, 1221, 1377
Bse3DI	GCAATG	5 cut(s)	99, 250, 387, 1027, 1238
BseAI	TCCGGA	1 cut(s)	364
BseBI	CCWGG	2 cut(s)	314, 1785
BseCI	ATCGAT	1 cut(s)	1938
BseDI	CCNNGG	2 cut(s)	312, 972
BseGI	GGATG	8 cut(s)	123, 501, 892, 1322, 1558, 1579, 1705, 1975
BseLI	CCNNNNNNNGG	6 cut(s)	564, 1043, 1153, 1332, 1338, 1784
BseMI	GCAATG	5 cut(s)	99, 250, 387, 1027, 1238
BseMII	CTCAG	1 cut(s)	138
BseNI	ACTGG	6 cut(s)	107, 497, 592, 1158, 1221, 1377
BseRI	GAGGAG	1 cut(s)	1785
BseSI	GKGCMC	1 cut(s)	1182
BseXI	GCAGC	4 cut(s)	361, 642, 845, 1114
Bsh1285I	CGRYCG	1 cut(s)	1652
BshFI	GGCC	3 cut(s)	310, 1891, 2070
BshVI	ATCGAT	1 cut(s)	1938
BsiEI	CGRYCG	1 cut(s)	1652
BsiHKAI	GWGCWC	1 cut(s)	1228
BsiHKCI	CYCGRG	1 cut(s)	1273
BsiSI	CCGG	4 cut(s)	365, 1332, 1380, 1648
BslFI	GGGAC	6 cut(s)	34, 113, 509, 815, 841, 1060
BslI	CCNNNNNNNGG	6 cut(s)	564, 1043, 1153, 1332, 1338, 1784
BsmAI	GTCTC	3 cut(s)	1646, 1659, 1871
BsmFI	GGGAC	6 cut(s)	34, 113, 509, 815, 841, 1060
BsmI	GAATGC	1 cut(s)	449
BsnI	GGCC	3 cut(s)	310, 1891, 2070
BsoBI	CYCGRG	1 cut(s)	1273
Bsp1286I	GDGCHC	3 cut(s)	1182, 1228, 1737
Bsp13I	TCCGGA	1 cut(s)	364
Bsp1407I	TGTACA	1 cut(s)	1254
Bsp143I	GATC	3 cut(s)	1288, 1542, 1628
Bsp19I	CCATGG	1 cut(s)	972
BspACI	CCGC	6 cut(s)	33, 36, 343, 711, 1454, 1866
BspANI	GGCC	3 cut(s)	310, 1891, 2070
BspCNI	CTCAG	1 cut(s)	139
BspDI	ATCGAT	1 cut(s)	1938
BspEI	TCCGGA	1 cut(s)	364
BspLI	GGNNCC	5 cut(s)	22, 23, 311, 497, 498
BspMAI	CTGCAG	1 cut(s)	660
BspMI	ACCTGC	1 cut(s)	252
BspPI	GGATC	1 cut(s)	1550
BspTI	CTTAAG	1 cut(s)	161
BsrBI	CCGCTC	1 cut(s)	1454
BsrDI	GCAATG	5 cut(s)	99, 250, 387, 1027, 1238
BsrFI	RCCGGY	2 cut(s)	1379, 1647
BsrGI	TGTACA	1 cut(s)	1254
BsrI	ACTGG	6 cut(s)	107, 497, 592, 1158, 1221, 1377
BssAI	RCCGGY	2 cut(s)	1379, 1647
BssECI	CCNNGG	2 cut(s)	312, 972
BssMI	GATC	3 cut(s)	1288, 1542, 1628
BssNAI	GTATAC	2 cut(s)	271, 1656
BssSI	CACGAG	1 cut(s)	677
BssT1I	CCWWGG	1 cut(s)	972
Bst1107I	GTATAC	2 cut(s)	271, 1656
Bst2BI	CACGAG	1 cut(s)	677
Bst2UI	CCWGG	2 cut(s)	314, 1785
Bst4CI	ACNGT	3 cut(s)	998, 1589, 1808
Bst6I	CTCTTC	1 cut(s)	563
BstAFI	CTTAAG	1 cut(s)	161
BstAUI	TGTACA	1 cut(s)	1254
BstC8I	GCNNGC	4 cut(s)	639, 856, 1356, 1889
BstDEI	CTNAG	4 cut(s)	74, 147, 186, 1122
BstDSI	CCRYGG	1 cut(s)	972
BstEII	GGTNACC	1 cut(s)	943
BstENI	CCTNNNNNAGG	1 cut(s)	1041
BstF5I	GGATG	8 cut(s)	123, 501, 892, 1322, 1558, 1579, 1705, 1975
BstKTI	GATC	3 cut(s)	1291, 1545, 1631
BstMAI	GTCTC	3 cut(s)	1646, 1659, 1871
BstMBI	GATC	3 cut(s)	1288, 1542, 1628
BstMCI	CGRYCG	1 cut(s)	1652
BstMWI	GCNNNNNNNGC	5 cut(s)	725, 791, 864, 1328, 1741
BstNI	CCWGG	2 cut(s)	314, 1785
BstNSI	RCATGY	2 cut(s)	920, 1358
BstPI	GGTNACC	1 cut(s)	943
BstSCI	CCNGG	3 cut(s)	312, 1331, 1783
BstSFI	CTRYAG	3 cut(s)	656, 1428, 1580
BstSLI	GKGCMC	1 cut(s)	1182
BstV1I	GCAGC	4 cut(s)	361, 642, 845, 1114
BstV2I	GAAGAC	2 cut(s)	960, 1542
BstX2I	RGATCY	1 cut(s)	1628
BstYI	RGATCY	1 cut(s)	1628
BstZ17I	GTATAC	2 cut(s)	271, 1656
Bsu15I	ATCGAT	1 cut(s)	1938
BsuI	GTATCC	2 cut(s)	372, 2040
BsuRI	GGCC	3 cut(s)	310, 1891, 2070
BsuTUI	ATCGAT	1 cut(s)	1938
BtgI	CCRYGG	1 cut(s)	972
BtsCI	GGATG	8 cut(s)	123, 501, 892, 1322, 1558, 1579, 1705, 1975
BtsI	GCAGTG	1 cut(s)	1788
BtsIMutI	CAGTG	9 cut(s)	144, 569, 1151, 1228, 1370, 1585, 1788, 1831, 1955
BveI	ACCTGC	1 cut(s)	252
Cac8I	GCNNGC	4 cut(s)	639, 856, 1356, 1889
Cfr10I	RCCGGY	2 cut(s)	1379, 1647
Cfr13I	GGNCC	3 cut(s)	21, 309, 496
ClaI	ATCGAT	1 cut(s)	1938
CseI	GACGC	1 cut(s)	1086
Csp6I	GTAC	4 cut(s)	81, 1189, 1255, 1848
CviQI	GTAC	4 cut(s)	81, 1189, 1255, 1848
DdeI	CTNAG	4 cut(s)	74, 147, 186, 1122
DpnI	GATC	3 cut(s)	1290, 1544, 1630
DpnII	GATC	3 cut(s)	1288, 1542, 1628
EaeI	YGGCCR	1 cut(s)	2068
Eam1104I	CTCTTC	1 cut(s)	563
EarI	CTCTTC	1 cut(s)	563
Eco130I	CCWWGG	1 cut(s)	972
Eco147I	AGGCCT	1 cut(s)	1891
Eco24I	GRGCYC	1 cut(s)	1737
Eco47I	GGWCC	2 cut(s)	21, 496
Eco57I	CTGAAG	1 cut(s)	440
Eco88I	CYCGRG	1 cut(s)	1273
Eco91I	GGTNACC	1 cut(s)	943
EcoNI	CCTNNNNNAGG	1 cut(s)	1041
EcoO109I	RGGNCCY	3 cut(s)	21, 309, 496
EcoO65I	GGTNACC	1 cut(s)	943
EcoRII	CCWGG	2 cut(s)	312, 1783
EcoT14I	CCWWGG	1 cut(s)	972
EcoT22I	ATGCAT	3 cut(s)	449, 1306, 1360
EcoT38I	GRGCYC	1 cut(s)	1737
ErhI	CCWWGG	1 cut(s)	972
FaqI	GGGAC	6 cut(s)	34, 113, 509, 815, 841, 1060
FauI	CCCGC	1 cut(s)	336
FauNDI	CATATG	2 cut(s)	357, 631
FblI	GTMKAC	2 cut(s)	270, 1655
Fnu4HI	GCNGC	8 cut(s)	34, 37, 375, 656, 859, 1128, 1455, 1866
FokI	GGATG	8 cut(s)	130, 488, 899, 1309, 1565, 1586, 1712, 1982
FriOI	GRGCYC	1 cut(s)	1737
Fsp4HI	GCNGC	8 cut(s)	34, 37, 375, 656, 859, 1128, 1455, 1866
FspBI	CTAG	2 cut(s)	1349, 1922
GluI	GCNGC	8 cut(s)	34, 37, 375, 656, 859, 1128, 1455, 1866
HaeIII	GGCC	3 cut(s)	310, 1891, 2070
HapII	CCGG	4 cut(s)	365, 1332, 1380, 1648
HgaI	GACGC	1 cut(s)	1086
HindIII	AAGCTT	1 cut(s)	107
HinfI	GANTC	6 cut(s)	52, 1133, 1139, 1925, 1973, 1982
HpaII	CCGG	4 cut(s)	365, 1332, 1380, 1648
HphI	GGTGA	5 cut(s)	16, 61, 937, 1394, 1989
Hpy166II	GTNNAC	6 cut(s)	144, 271, 983, 1191, 1255, 1656
Hpy188I	TCNGA	8 cut(s)	171, 420, 612, 723, 1138, 1144, 1603, 1909
Hpy188III	TCNNGA	9 cut(s)	323, 365, 663, 1275, 1326, 1550, 1662, 1799, 1979
Hpy8I	GTNNAC	6 cut(s)	144, 271, 983, 1191, 1255, 1656
Hpy99I	CGWCG	1 cut(s)	518
HpyCH4III	ACNGT	3 cut(s)	998, 1589, 1808
HpyCH4IV	ACGT	1 cut(s)	516
HpyF10VI	GCNNNNNNNGC	5 cut(s)	725, 791, 864, 1328, 1741
HpyF3I	CTNAG	4 cut(s)	74, 147, 186, 1122
HpySE526I	ACGT	1 cut(s)	516
KflI	GGGWCCC	2 cut(s)	21, 496
Kpn2I	TCCGGA	1 cut(s)	364
Kzo9I	GATC	3 cut(s)	1288, 1542, 1628
LmnI	GCTCC	4 cut(s)	623, 724, 1798, 1822
Lsp1109I	GCAGC	4 cut(s)	361, 642, 845, 1114
LweI	GCATC	7 cut(s)	330, 877, 1223, 1313, 1331, 1564, 1804
MaeI	CTAG	2 cut(s)	1349, 1922
MaeII	ACGT	1 cut(s)	516
MaeIII	GTNAC	4 cut(s)	394, 894, 943, 1594
MalI	GATC	3 cut(s)	1290, 1544, 1630
MbiI	CCGCTC	1 cut(s)	1454
MboI	GATC	3 cut(s)	1288, 1542, 1628
MboII	GAAGA	7 cut(s)	580, 919, 960, 1033, 1127, 1547, 1925
MfeI	CAATTG	1 cut(s)	1397
MflI	RGATCY	1 cut(s)	1628
MhlI	GDGCHC	3 cut(s)	1182, 1228, 1737
MluCI	AATT	8 cut(s)	288, 425, 686, 1106, 1386, 1397, 1675, 1829
MlyI	GAGTC	1 cut(s)	1919
MmeI	TCCRAC	1 cut(s)	176
Mph1103I	ATGCAT	3 cut(s)	449, 1306, 1360
MroI	TCCGGA	1 cut(s)	364
MseI	TTAA	5 cut(s)	162, 1467, 1559, 1616, 1622
MslI	CAYNNNNRTG	4 cut(s)	956, 990, 1085, 1590
MspA1I	CMGCKG	1 cut(s)	1868
MspCI	CTTAAG	1 cut(s)	161
MspI	CCGG	4 cut(s)	365, 1332, 1380, 1648
MspR9I	CCNGG	3 cut(s)	314, 1333, 1785
MunI	CAATTG	1 cut(s)	1397
Mva1269I	GAATGC	1 cut(s)	449
MvaI	CCWGG	2 cut(s)	314, 1785
MwoI	GCNNNNNNNGC	5 cut(s)	725, 791, 864, 1328, 1741
NciI	CCSGG	1 cut(s)	1333
NcoI	CCATGG	1 cut(s)	972
NdeI	CATATG	2 cut(s)	357, 631
NdeII	GATC	3 cut(s)	1288, 1542, 1628
NlaIV	GGNNCC	5 cut(s)	22, 23, 311, 497, 498
NmeAIII	GCCGAG	1 cut(s)	2046
NmuCI	GTSAC	1 cut(s)	943
NsiI	ATGCAT	3 cut(s)	449, 1306, 1360
NspI	RCATGY	2 cut(s)	920, 1358
PaeI	GCATGC	1 cut(s)	1358
PceI	AGGCCT	1 cut(s)	1891
PciI	ACATGT	1 cut(s)	916
PcsI	WCGNNNNNNNCGW	1 cut(s)	1658
PctI	GAATGC	1 cut(s)	449
PfeI	GAWTC	5 cut(s)	52, 1133, 1139, 1973, 1982
PkrI	GCNGC	8 cut(s)	35, 38, 376, 657, 860, 1129, 1456, 1867
PleI	GAGTC	1 cut(s)	1919
PpsI	GAGTC	1 cut(s)	1919
PpuMI	RGGWCCY	2 cut(s)	21, 496
PscI	ACATGT	1 cut(s)	916
PsiI	TTATAA	1 cut(s)	231
Psp5II	RGGWCCY	2 cut(s)	21, 496
Psp6I	CCWGG	2 cut(s)	312, 1783
PspEI	GGTNACC	1 cut(s)	943
PspGI	CCWGG	2 cut(s)	312, 1783
PspN4I	GGNNCC	5 cut(s)	22, 23, 311, 497, 498
PspPI	GGNCC	3 cut(s)	21, 309, 496
PspPPI	RGGWCCY	2 cut(s)	21, 496
PstI	CTGCAG	1 cut(s)	660
PsuI	RGATCY	1 cut(s)	1628
RsaI	GTAC	4 cut(s)	82, 1190, 1256, 1849
RsaNI	GTAC	4 cut(s)	81, 1189, 1255, 1848
RseI	CAYNNNNRTG	4 cut(s)	956, 990, 1085, 1590
SaqAI	TTAA	5 cut(s)	162, 1467, 1559, 1616, 1622
SatI	GCNGC	8 cut(s)	34, 37, 375, 656, 859, 1128, 1455, 1866
Sau3AI	GATC	3 cut(s)	1288, 1542, 1628
Sau96I	GGNCC	3 cut(s)	21, 309, 496
SchI	GAGTC	1 cut(s)	1919
ScrFI	CCNGG	3 cut(s)	314, 1333, 1785
SduI	GDGCHC	3 cut(s)	1182, 1228, 1737
SfaNI	GCATC	7 cut(s)	330, 877, 1223, 1313, 1331, 1564, 1804
SfcI	CTRYAG	3 cut(s)	656, 1428, 1580
SinI	GGWCC	2 cut(s)	21, 496
SmiMI	CAYNNNNRTG	4 cut(s)	956, 990, 1085, 1590
SmlI	CTYRAG	2 cut(s)	161, 1208
SmoI	CTYRAG	2 cut(s)	161, 1208
SphI	GCATGC	1 cut(s)	1358
Sse9I	AATT	8 cut(s)	288, 425, 686, 1106, 1386, 1397, 1675, 1829
SseBI	AGGCCT	1 cut(s)	1891
SsiI	CCGC	6 cut(s)	33, 36, 343, 711, 1454, 1866
SspMI	CTAG	2 cut(s)	1349, 1922
StuI	AGGCCT	1 cut(s)	1891
StyD4I	CCNGG	3 cut(s)	312, 1331, 1783
StyI	CCWWGG	1 cut(s)	972
TaaI	ACNGT	3 cut(s)	998, 1589, 1808
TaiI	ACGT	1 cut(s)	519
TaqI	TCGA	7 cut(s)	113, 1435, 1661, 1840, 1928, 1938, 1950
TaqII	GACCGA	1 cut(s)	392
TasI	AATT	8 cut(s)	288, 425, 686, 1106, 1386, 1397, 1675, 1829
TatI	WGTACW	2 cut(s)	1188, 1254
TauI	GCSGC	4 cut(s)	36, 39, 1457, 1868
TfiI	GAWTC	5 cut(s)	52, 1133, 1139, 1973, 1982
Tru1I	TTAA	5 cut(s)	162, 1467, 1559, 1616, 1622
Tru9I	TTAA	5 cut(s)	162, 1467, 1559, 1616, 1622
TscAI	CASTG	9 cut(s)	151, 569, 1158, 1228, 1377, 1592, 1795, 1831, 1962
TseFI	GTSAC	1 cut(s)	943
TseI	GCWGC	4 cut(s)	374, 655, 858, 1127
Tsp45I	GTSAC	1 cut(s)	943
TspRI	CASTG	9 cut(s)	151, 569, 1158, 1228, 1377, 1592, 1795, 1831, 1962
Vha464I	CTTAAG	1 cut(s)	161
VpaK11BI	GGWCC	2 cut(s)	21, 496
XagI	CCTNNNNNAGG	1 cut(s)	1041
XapI	RAATTY	3 cut(s)	1386, 1675, 1829
XceI	RCATGY	2 cut(s)	920, 1358
XmiI	GTMKAC	2 cut(s)	270, 1655
XspI	CTAG	2 cut(s)	1349, 1922
Zsp2I	ATGCAT	3 cut(s)	449, 1306, 1360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.