Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0013594

Physical Location & Seq

Genomic Coordinates Forward (+)

11264096 .. 11271834

Gene Structure 7739 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g19010.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2841 bp

ATGATGAAGGAATTAAACATTTGGGTTTTAAGACTAACAGACTTCTTCATCCTTTGCCTCTTCATTTTTACGCCATTGACTTCTGCAGATGAAGGCAGTAATTCAAGCAGCTTTGTGAGCATTGCATGCTGCTCAGAATCTAACTTTATAGATAGCAAAAACATCAGTTGGGTAACAGACGTGAATGAGTTTCATAATAGGCTAAGTTGTGAGAACAGAACTTCTGTAGGTGTGCGAGTTGCGATCGGTAATGTCAACAATAAAACAAGGGTGTTTCACGTTGGTCCAGATCAGAAAAGATGTTATACCTTGCCATCAAAAAAGGGGCAAGACTATCTAATTAGGGGTATTTTCGGAGGCATCTGGGGATTGAAATTTACAGTTGCTGTTGATGTGACCACAATCGGAGTAGTAGATTCACTCGATGATTATGCGGTCGAGGGAGTTGTTAGAGCTACCAAGGACTACATAAACTTTTGCTTGGTCAGTGACAAAGGAGAACTTTATATTTCAGAGATTCATTTGAGGCCTCTGTGGAACTTGACTTACTATCTAGAGGACTTCCCCTCAAGTGTTCTGCAACTGCTTGAAAGGACTAGTTTTGATGAAGACGACGCAGAAAAGGTCATCAGGTACGGAGTTGACCCGAGTGACAGAATCTGGTTAACGAACTCAACTGTCGACCCGGGGACCTACCTCATACCAGAACCCAATGTCGTCAACGTTCTGGGTTCCAGAGATGTTCGAGTCCCCATTCAAGTCCTCAAAACAGCTCTAGCTTCTTCAGACCGCTTGGTCATTCTTCACAATGGCCTGTCCTCATCGAACAGCCACTACCTTTTGTTCTTGTACTTCTATGAAGTCAATCACACTGTTCAAGCTGGGGAGAGGGTTTTTGATGTTTACTTGAACAGTGAGCTGAGACAATCTGGGTTTGATGTTATGGGTGATGGATCAAATTACAGGGAGCTTGCTTTGAATGTGACAGCAAATTGGTATCTGAATCTAACTCTGGTCAAGGCCTCTGAGTCTGAAAATGGACCCATTTGCAATGCCTATGAGATCTTGCAGGTGCACCAGTTGGTTCAGGAGACTGACACAGATGATGTGGAAGTGATTTTGGAGGTGAGGAGTGAGTTGCTGGAGAGGAATGAGAAGAATGAAGTTTGGGAAGGGTGGACTGGAGACCCATGTCTTCCTGTTCCCTGGAATGGTATAGGTTGTGATACTGTTAATGGTGTCCCTGTCATTACCAAACTGGATCTTTCTTCTGGCATTCAGAGAAGCCCTGATGAAGAACGCATACTTAGGGGACCATTTCCTAAAAGCATTCCTAAACTGACTCACCTAAGATTCCTGAACCTCAGCAACAATGAGTTTATTGGCCAAATTCCAGAATTTCTTCAATCTTCCTTGTTGATTTCAGTGGATCTGAGCCACAATAAACTTTCGGGGCCACTTCCAAAATCTCTTACTTCACTACCAAATTTGGCAACACTAAATTATGGCTGCAATCCAGAGCTCACTGAAGTTAGTCCATCAACCTTCAAAGCCTTAAAAGTTACAACAGACCATGGAAATTGTGGTGTTCAAGAATCATCAAAACGAGGAATCATCATTGGTGCTGCTGCTGTATCTGGATCTTTACTAGTAACAGCTGTCGCCGGGATCATTTTTTTCATGTGGAGAAAAAAGTTTATGCCTCGAGGAAAATCTGATAAGAAATTATATCCTATGGCAAAGAATTTAATTTTCTCATTACCTAGCATGGATGATCTGGTCATAAAATCAATATCCATAGAGACATTTACTCTTGATTACCTAGAGGCTGTCACCCAAAGTTACAAAACGCTGATAGGTGAAGGAGGTTTTGGGTCTGTTTACCGGGGCACTTTAACTGATGGTCAGGAAGTGGCAGTGAAGGTTCGATCAGCAACATCAACCCAAGGGACTCGGGAATTTAATAATGAGCTAAATCTTCTATCAACCATTCGGCATGAAAATCTTGTGCCTCTTCTTGGTTATTGTAACGAAAAGGACCAAGAAATTCTTGTTTATCCATTTATGTCCAATGGCTCTCTGCAAGATCGCCTATATGGGGAAGCAGCAAAAAGGAAAATTCTGGACTGGCCAACAAGACTGTCAATCGCTCTTGGTGCTGCTCGAGGTTTGACGCATCTGCACAATTTTGCTGGGCGTTGCATTATACATAGGGATGTGAAATCAAGTAATATACTTCTGGATCAAAGCATGTGTGCCAAGGTGGCAGACTTTGGTTTTTCAAAATATGCTCCTCAAGAAGGTGATAGTGGTGCTTCTCTGGAAGTAAGAGGGACAGCTGGATACTTGGATCCAGAGTACTACACAACCCATCATTTATCAACAAAAAGTGATGTGTTCAGCTTTGGTGTGGTTCTACTTGAAATTGTTACTGGTCGGGAACCTCTAAACATACACAGGCCACGTCCCGAGTGGAGCCTAGTCGAATGGGCGAAACCTTATATAAGGGAGTCAAAGATTGAAGAAATTGTTGATCCAAATATAAAAGGAGCATACCATGCAGAAGCAATGTGGAGGGTAGTGGAGGTAGCATTGTCATGTATTGAGCCCTTCTCTGCTTACCGACCAGGCATGGCTGACATTGTTCGCGAGCTAGAGGATTCTCTGATAATAGAGAACAATGCATCAGAATACATGAGATCCATAGAGAGTACCGGATCAAATCGCTTTTCCTCAATCATGGAAAGAAGCATAGTCATGGACAGAAGAATACCGCCACCTTCTACTCCTTCAGAACCCTCAACTATTTTGACACAAATGGCCCCTCCAGAGCCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046777 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

947

Amino Acids

105.68

Weight (kDa)

5.29

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	47 - 358	2.7e-34	Malectin-like domain
Malectin	PF11721	274 - 315	9.4e-06	Malectin domain
PK_Tyr_Ser-Thr	PF07714	616 - 768	1.2e-30	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	616 - 786	6.4e-30	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013594)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g19010 FvH4_1g19010 FvH4_1g19010
malus_domestica	MD01G1044500.v1.1 MD15G1307000.v1.1
prunus_persica	Prupe.6G209400_v2.0.a1 Prupe.6G209400_v2.0.a1 Prupe.6G209400_v2.0.a1
pyrus_communis	pycom15g27100
rosa_chinensis	RchiOBHm_Chr2g0110021
rosa_laevigata	RLG00000017781
rosa_roxburghii	Rroxscaffold_2G00133770
rosa_rugosa	Rorug02G0165200
rosa_samantha	Rh2AG217000 Rh2BG226900 Rh2CG219100 Rh2DG222700
rosa_wichuraiana	Rw2G016760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1060
AasI	GACNNNNNNGTC	1 cut(s)	794
AbsI	CCTCGAGG	1 cut(s)	1704
Acc36I	ACCTGC	1 cut(s)	1060
AccI	GTMKAC	1 cut(s)	681
AccII	CGCG	1 cut(s)	2649
AciI	CCGC	3 cut(s)	434, 790, 2774
AclI	AACGTT	1 cut(s)	723
AcoI	YGGCCR	2 cut(s)	1384, 2129
AcsI	RAATTY	8 cut(s)	374, 1389, 1397, 1486, 1744, 1958, 2046, 2118
AcuI	CTGAAG	3 cut(s)	768, 1548, 2775
AfaI	GTAC	4 cut(s)	635, 851, 2360, 2713
AfiI	CCNNNNNNNGG	4 cut(s)	1211, 2018, 2098, 2300
AhlI	ACTAGT	2 cut(s)	596, 1648
AjiI	CACGTC	2 cut(s)	181, 2465
AjnI	CCWGG	2 cut(s)	1205, 2626
AjuI	GAANNNNNNNTTGG	2 cut(s)	1854, 1886
Alw21I	GWGCWC	2 cut(s)	1077, 1524
Alw26I	GTCTC	4 cut(s)	916, 1085, 1179, 1796
Alw44I	GTGCAC	1 cut(s)	1073
AlwNI	CAGNNNCTG	2 cut(s)	386, 660
Ama87I	CYCGRG	6 cut(s)	646, 685, 1704, 1953, 2163, 2468
AoxI	GGCC	8 cut(s)	527, 811, 1020, 1384, 1454, 2129, 2459, 2820
ApaLI	GTGCAC	1 cut(s)	1073
ApeKI	GCWGC	7 cut(s)	108, 129, 1509, 1625, 1628, 2105, 2159
ApoI	RAATTY	8 cut(s)	374, 1389, 1397, 1486, 1744, 1958, 2046, 2118
Asp700I	GAANNNNTTC	1 cut(s)	1401
AspS9I	GGNCC	7 cut(s)	284, 690, 1040, 1313, 1454, 2038, 2821
AsuC2I	CCSGG	4 cut(s)	686, 687, 1666, 1886
AsuHPI	GGTGA	6 cut(s)	959, 1138, 1337, 1825, 1871, 2315
AvaI	CYCGRG	6 cut(s)	646, 685, 1704, 1953, 2163, 2468
AvaII	GGWCC	5 cut(s)	284, 690, 1040, 1313, 2038
BaeGI	GKGCMC	2 cut(s)	1077, 1892
BalI	TGGCCA	2 cut(s)	1386, 2131
BamHI	GGATCC	1 cut(s)	2350
BanII	GRGCYC	2 cut(s)	1524, 2610
BarI	GAAGNNNNNNTAC	2 cut(s)	1287, 1319
BbsI	GAAGAC	2 cut(s)	615, 1187
Bbv12I	GWGCWC	2 cut(s)	1077, 1524
BbvCI	CCTCAGC	1 cut(s)	1364
BbvI	GCAGC	7 cut(s)	116, 120, 1496, 1612, 1615, 2117, 2146
BccI	CCATC	5 cut(s)	322, 944, 1546, 1895, 2379
BcgI	CGANNNNNNTGC	2 cut(s)	413, 447
BciT130I	CCWGG	2 cut(s)	1207, 2628
BciVI	GTATCC	1 cut(s)	2336
BcnI	CCSGG	4 cut(s)	686, 687, 1666, 1886
BcoDI	GTCTC	4 cut(s)	916, 1085, 1179, 1796
BcuI	ACTAGT	2 cut(s)	596, 1648
BfaI	CTAG	8 cut(s)	554, 597, 776, 1649, 1764, 1823, 2480, 2654
BfmI	CTRYAG	2 cut(s)	84, 225
BfuAI	ACCTGC	1 cut(s)	1060
BfuI	GTATCC	1 cut(s)	2336
BglI	GCCNNNNNGGC	1 cut(s)	2264
BglII	AGATCT	1 cut(s)	1062
BisI	GCNGC	7 cut(s)	109, 130, 1510, 1626, 1629, 2106, 2160
BlsI	GCNGC	7 cut(s)	110, 131, 1511, 1627, 1630, 2107, 2161
BmcAI	AGTACT	1 cut(s)	2360
Bme1390I	CCNGG	6 cut(s)	686, 687, 1207, 1666, 1886, 2628
Bme18I	GGWCC	5 cut(s)	284, 690, 1040, 1313, 2038
BmeT110I	CYCGRG	6 cut(s)	646, 685, 1704, 1953, 2163, 2468
BmgBI	CACGTC	2 cut(s)	181, 2465
BmgT120I	GGNCC	7 cut(s)	284, 690, 1040, 1313, 1454, 2038, 2821
BmiI	GGNNCC	9 cut(s)	691, 733, 1042, 1314, 1455, 2352, 2442, 2477, 2823
BmrFI	CCNGG	6 cut(s)	686, 687, 1207, 1666, 1886, 2628
BmsI	GCATC	3 cut(s)	369, 2185, 2693
BoxI	GACNNNNGTC	1 cut(s)	1191
BpiI	GAAGAC	2 cut(s)	615, 1187
BplI	GAGNNNNNCTC	2 cut(s)	2597, 2629
BpmI	CTGGAG	3 cut(s)	1163, 1203, 2811
Bpu10I	CCTNAGC	1 cut(s)	1364
BpuEI	CTTGAG	2 cut(s)	553, 2280
BpuMI	CCSGG	4 cut(s)	686, 687, 1666, 1886
BsaI	GGTCTC	1 cut(s)	1179
BsaJI	CCNNGG	8 cut(s)	459, 685, 686, 1205, 1573, 1885, 1945, 2259
BsaWI	WCCGGW	1 cut(s)	2714
Bsc4I	CCNNNNNNNGG	4 cut(s)	1211, 2018, 2098, 2300
Bse1I	ACTGG	5 cut(s)	1078, 1186, 1263, 2132, 2437
Bse3DI	GCAATG	3 cut(s)	120, 1057, 2574
BseBI	CCWGG	2 cut(s)	1207, 2628
BseDI	CCNNGG	8 cut(s)	459, 685, 686, 1205, 1573, 1885, 1945, 2259
BseGI	GGATG	3 cut(s)	48, 1777, 2221
BseLI	CCNNNNNNNGG	4 cut(s)	1211, 2018, 2098, 2300
BseMI	GCAATG	3 cut(s)	120, 1057, 2574
BseMII	CTCAG	5 cut(s)	147, 911, 1017, 1378, 1424
BseNI	ACTGG	5 cut(s)	1078, 1186, 1263, 2132, 2437
BseRI	GAGGAG	2 cut(s)	1144, 2283
BseSI	GKGCMC	2 cut(s)	1077, 1892
BseXI	GCAGC	7 cut(s)	116, 120, 1496, 1612, 1615, 2117, 2146
BseYI	CCCAGC	2 cut(s)	881, 2192
BsgI	GTGCAG	1 cut(s)	2165
Bsh1236I	CGCG	1 cut(s)	2649
Bsh1285I	CGRYCG	2 cut(s)	246, 438
BshFI	GGCC	8 cut(s)	529, 813, 1022, 1386, 1456, 2131, 2461, 2822
BsiEI	CGRYCG	2 cut(s)	246, 438
BsiHKAI	GWGCWC	2 cut(s)	1077, 1524
BsiHKCI	CYCGRG	6 cut(s)	646, 685, 1704, 1953, 2163, 2468
BsiSI	CCGG	4 cut(s)	686, 1665, 1885, 2715
BslFI	GGGAC	7 cut(s)	703, 734, 1226, 1326, 1963, 2347, 2451
BslI	CCNNNNNNNGG	4 cut(s)	1211, 2018, 2098, 2300
BsmAI	GTCTC	4 cut(s)	916, 1085, 1179, 1796
BsmFI	GGGAC	7 cut(s)	703, 734, 1226, 1326, 1963, 2347, 2451
BsmI	GAATGC	2 cut(s)	1275, 1329
BsnI	GGCC	8 cut(s)	529, 813, 1022, 1386, 1456, 2131, 2461, 2822
Bso31I	GGTCTC	1 cut(s)	1179
BsoBI	CYCGRG	6 cut(s)	646, 685, 1704, 1953, 2163, 2468
Bsp1286I	GDGCHC	4 cut(s)	1077, 1524, 1892, 2610
Bsp19I	CCATGG	1 cut(s)	1573
Bsp68I	TCGCGA	1 cut(s)	2649
BspACI	CCGC	3 cut(s)	434, 790, 2774
BspANI	GGCC	8 cut(s)	529, 813, 1022, 1386, 1456, 2131, 2461, 2822
BspCNI	CTCAG	5 cut(s)	146, 912, 1018, 1377, 1425
BspFNI	CGCG	1 cut(s)	2649
BspLI	GGNNCC	9 cut(s)	691, 733, 1042, 1314, 1455, 2352, 2442, 2477, 2823
BspMAI	CTGCAG	1 cut(s)	88
BspMI	ACCTGC	1 cut(s)	1060
BspTNI	GGTCTC	1 cut(s)	1179
BsrDI	GCAATG	3 cut(s)	120, 1057, 2574
BsrI	ACTGG	5 cut(s)	1078, 1186, 1263, 2132, 2437
BssECI	CCNNGG	8 cut(s)	459, 685, 686, 1205, 1573, 1885, 1945, 2259
BssT1I	CCWWGG	4 cut(s)	459, 1573, 1945, 2259
Bst2UI	CCWGG	2 cut(s)	1207, 2628
Bst4CI	ACNGT	6 cut(s)	382, 679, 874, 914, 1231, 2142
Bst6I	CTCTTC	2 cut(s)	65, 2019
BstAPI	GCANNNNNTGC	2 cut(s)	126, 2558
BstC8I	GCNNGC	3 cut(s)	127, 972, 2651
BstDEI	CTNAG	8 cut(s)	133, 203, 920, 1026, 1307, 1349, 1364, 1433
BstDSI	CCRYGG	1 cut(s)	1573
BstENI	CCTNNNNNAGG	1 cut(s)	2298
BstF5I	GGATG	3 cut(s)	48, 1777, 2221
BstFNI	CGCG	1 cut(s)	2649
BstMAI	GTCTC	4 cut(s)	916, 1085, 1179, 1796
BstMCI	CGRYCG	2 cut(s)	246, 438
BstMWI	GCNNNNNNNGC	5 cut(s)	117, 126, 2156, 2264, 2558
BstNI	CCWGG	2 cut(s)	1207, 2628
BstNSI	RCATGY	2 cut(s)	129, 2254
BstPAI	GACNNNNGTC	1 cut(s)	1191
BstSCI	CCNGG	6 cut(s)	684, 685, 1205, 1664, 1884, 2626
BstSFI	CTRYAG	2 cut(s)	84, 225
BstSLI	GKGCMC	2 cut(s)	1077, 1892
BstUI	CGCG	1 cut(s)	2649
BstV1I	GCAGC	7 cut(s)	116, 120, 1496, 1612, 1615, 2117, 2146
BstV2I	GAAGAC	2 cut(s)	615, 1187
BstX2I	RGATCY	6 cut(s)	1062, 1261, 1429, 1640, 2350, 2699
BstYI	RGATCY	6 cut(s)	1062, 1261, 1429, 1640, 2350, 2699
BsuI	GTATCC	1 cut(s)	2336
BsuRI	GGCC	8 cut(s)	529, 813, 1022, 1386, 1456, 2131, 2461, 2822
BtgI	CCRYGG	1 cut(s)	1573
BtrI	CACGTC	2 cut(s)	181, 2465
BtsCI	GGATG	3 cut(s)	48, 1777, 2221
BtsI	GCAGTG	1 cut(s)	1923
BtsIMutI	CAGTG	6 cut(s)	493, 870, 919, 1431, 1524, 1923
BtuMI	TCGCGA	1 cut(s)	2649
BveI	ACCTGC	1 cut(s)	1060
Cac8I	GCNNGC	3 cut(s)	127, 972, 2651
CaiI	CAGNNNCTG	2 cut(s)	386, 660
Cfr13I	GGNCC	7 cut(s)	284, 690, 1040, 1313, 1454, 2038, 2821
Cfr9I	CCCGGG	1 cut(s)	685
CseI	GACGC	2 cut(s)	623, 2182
Csp6I	GTAC	4 cut(s)	634, 850, 2359, 2712
CviQI	GTAC	4 cut(s)	634, 850, 2359, 2712
DdeI	CTNAG	8 cut(s)	133, 203, 920, 1026, 1307, 1349, 1364, 1433
DrdI	GACNNNNNNGTC	1 cut(s)	794
DseDI	GACNNNNNNGTC	1 cut(s)	794
EaeI	YGGCCR	2 cut(s)	1384, 2129
Eam1104I	CTCTTC	2 cut(s)	65, 2019
EarI	CTCTTC	2 cut(s)	65, 2019
Ecl136II	GAGCTC	1 cut(s)	1522
Eco130I	CCWWGG	4 cut(s)	459, 1573, 1945, 2259
Eco147I	AGGCCT	2 cut(s)	529, 1022
Eco24I	GRGCYC	2 cut(s)	1524, 2610
Eco31I	GGTCTC	1 cut(s)	1179
Eco47I	GGWCC	5 cut(s)	284, 690, 1040, 1313, 2038
Eco53kI	GAGCTC	1 cut(s)	1522
Eco57I	CTGAAG	3 cut(s)	768, 1548, 2775
Eco88I	CYCGRG	6 cut(s)	646, 685, 1704, 1953, 2163, 2468
EcoICRI	GAGCTC	1 cut(s)	1522
EcoNI	CCTNNNNNAGG	1 cut(s)	2298
EcoO109I	RGGNCCY	1 cut(s)	690
EcoRII	CCWGG	2 cut(s)	1205, 2626
EcoT14I	CCWWGG	4 cut(s)	459, 1573, 1945, 2259
EcoT22I	ATGCAT	1 cut(s)	2686
EcoT38I	GRGCYC	2 cut(s)	1524, 2610
ErhI	CCWWGG	4 cut(s)	459, 1573, 1945, 2259
FalI	AAGNNNNNCTT	4 cut(s)	486, 518, 2034, 2066
FaqI	GGGAC	7 cut(s)	703, 734, 1226, 1326, 1963, 2347, 2451
FblI	GTMKAC	1 cut(s)	681
Fnu4HI	GCNGC	7 cut(s)	109, 130, 1510, 1626, 1629, 2106, 2160
FokI	GGATG	3 cut(s)	35, 1784, 2228
FriOI	GRGCYC	2 cut(s)	1524, 2610
Fsp4HI	GCNGC	7 cut(s)	109, 130, 1510, 1626, 1629, 2106, 2160
FspBI	CTAG	8 cut(s)	554, 597, 776, 1649, 1764, 1823, 2480, 2654
GluI	GCNGC	7 cut(s)	109, 130, 1510, 1626, 1629, 2106, 2160
GsaI	CCCAGC	2 cut(s)	885, 2196
GsuI	CTGGAG	3 cut(s)	1163, 1203, 2811
HaeIII	GGCC	8 cut(s)	529, 813, 1022, 1386, 1456, 2131, 2461, 2822
HapII	CCGG	4 cut(s)	686, 1665, 1885, 2715
HgaI	GACGC	2 cut(s)	623, 2182
HincII	GTYRAC	5 cut(s)	256, 643, 666, 682, 721
HindII	GTYRAC	5 cut(s)	256, 643, 666, 682, 721
HpaI	GTTAAC	1 cut(s)	666
HpaII	CCGG	4 cut(s)	686, 1665, 1885, 2715
HphI	GGTGA	6 cut(s)	959, 1138, 1337, 1825, 1871, 2315
Hpy166II	GTNNAC	9 cut(s)	256, 643, 666, 682, 721, 904, 1075, 1179, 1882
Hpy8I	GTNNAC	9 cut(s)	256, 643, 666, 682, 721, 904, 1075, 1179, 1882
Hpy99I	CGWCG	1 cut(s)	617
HpyAV	CCTTC	9 cut(s)	86, 1166, 1555, 1856, 1915, 2294, 2620, 2790, 2799
HpyCH4III	ACNGT	6 cut(s)	382, 679, 874, 914, 1231, 2142
HpyCH4IV	ACGT	4 cut(s)	180, 279, 723, 2464
HpyF10VI	GCNNNNNNNGC	5 cut(s)	117, 126, 2156, 2264, 2558
HpyF3I	CTNAG	8 cut(s)	133, 203, 920, 1026, 1307, 1349, 1364, 1433
HpySE526I	ACGT	4 cut(s)	180, 279, 723, 2464
KspAI	GTTAAC	1 cut(s)	666
LmnI	GCTCC	4 cut(s)	967, 2296, 2475, 2549
Lsp1109I	GCAGC	7 cut(s)	116, 120, 1496, 1612, 1615, 2117, 2146
LweI	GCATC	3 cut(s)	369, 2185, 2693
MaeI	CTAG	8 cut(s)	554, 597, 776, 1649, 1764, 1823, 2480, 2654
MaeII	ACGT	4 cut(s)	180, 279, 723, 2464
MflI	RGATCY	6 cut(s)	1062, 1261, 1429, 1640, 2350, 2699
MhlI	GDGCHC	4 cut(s)	1077, 1524, 1892, 2610
MlsI	TGGCCA	2 cut(s)	1386, 2131
MluNI	TGGCCA	2 cut(s)	1386, 2131
MlyI	GAGTC	5 cut(s)	756, 1037, 1336, 1945, 2519
Mox20I	TGGCCA	2 cut(s)	1386, 2131
Mph1103I	ATGCAT	1 cut(s)	2686
MroXI	GAANNNNTTC	1 cut(s)	1401
MscI	TGGCCA	2 cut(s)	1386, 2131
MseI	TTAA	8 cut(s)	14, 29, 665, 1233, 1556, 1748, 1895, 1962
MslI	CAYNNNNRTG	3 cut(s)	2214, 2596, 2756
Msp20I	TGGCCA	2 cut(s)	1386, 2131
MspA1I	CMGCKG	2 cut(s)	1658, 2339
MspI	CCGG	4 cut(s)	686, 1665, 1885, 2715
MspR9I	CCNGG	6 cut(s)	686, 687, 1207, 1666, 1886, 2628
Mva1269I	GAATGC	2 cut(s)	1275, 1329
MvaI	CCWGG	2 cut(s)	1207, 2628
MvnI	CGCG	1 cut(s)	2649
MwoI	GCNNNNNNNGC	5 cut(s)	117, 126, 2156, 2264, 2558
NciI	CCSGG	4 cut(s)	686, 687, 1666, 1886
NcoI	CCATGG	1 cut(s)	1573
NlaIV	GGNNCC	9 cut(s)	691, 733, 1042, 1314, 1455, 2352, 2442, 2477, 2823
NmuCI	GTSAC	5 cut(s)	394, 488, 650, 982, 1831
NruI	TCGCGA	1 cut(s)	2649
NsiI	ATGCAT	1 cut(s)	2686
NspI	RCATGY	2 cut(s)	129, 2254
PaeI	GCATGC	1 cut(s)	129
PaeR7I	CTCGAG	2 cut(s)	1704, 2163
PaqCI	CACCTGC	1 cut(s)	1060
PceI	AGGCCT	2 cut(s)	529, 1022
PctI	GAATGC	2 cut(s)	1275, 1329
PdmI	GAANNNNTTC	1 cut(s)	1401
PfeI	GAWTC	9 cut(s)	137, 416, 517, 657, 1003, 1353, 1595, 1611, 2660
PkrI	GCNGC	7 cut(s)	110, 131, 1511, 1627, 1630, 2107, 2161
Ple19I	CGATCG	1 cut(s)	246
PleI	GAGTC	5 cut(s)	755, 1036, 1336, 1945, 2518
PpsI	GAGTC	5 cut(s)	755, 1036, 1336, 1945, 2518
PpuMI	RGGWCCY	1 cut(s)	690
PshAI	GACNNNNGTC	1 cut(s)	1191
Psp124BI	GAGCTC	1 cut(s)	1524
Psp1406I	AACGTT	1 cut(s)	723
Psp5II	RGGWCCY	1 cut(s)	690
Psp6I	CCWGG	2 cut(s)	1205, 2626
PspFI	CCCAGC	2 cut(s)	881, 2192
PspGI	CCWGG	2 cut(s)	1205, 2626
PspN4I	GGNNCC	9 cut(s)	691, 733, 1042, 1314, 1455, 2352, 2442, 2477, 2823
PspPI	GGNCC	7 cut(s)	284, 690, 1040, 1313, 1454, 2038, 2821
PspPPI	RGGWCCY	1 cut(s)	690
PspXI	VCTCGAGB	2 cut(s)	1704, 2163
PsrI	GAACNNNNNNTAC	4 cut(s)	530, 562, 818, 850
PstI	CTGCAG	1 cut(s)	88
PstNI	CAGNNNCTG	2 cut(s)	386, 660
PsuI	RGATCY	6 cut(s)	1062, 1261, 1429, 1640, 2350, 2699
PvuI	CGATCG	1 cut(s)	246
PvuII	CAGCTG	2 cut(s)	1658, 2339
RruI	TCGCGA	1 cut(s)	2649
RsaI	GTAC	4 cut(s)	635, 851, 2360, 2713
RsaNI	GTAC	4 cut(s)	634, 850, 2359, 2712
RseI	CAYNNNNRTG	3 cut(s)	2214, 2596, 2756
SacI	GAGCTC	1 cut(s)	1524
SalI	GTCGAC	1 cut(s)	680
SaqAI	TTAA	8 cut(s)	14, 29, 665, 1233, 1556, 1748, 1895, 1962
SatI	GCNGC	7 cut(s)	109, 130, 1510, 1626, 1629, 2106, 2160
Sau96I	GGNCC	7 cut(s)	284, 690, 1040, 1313, 1454, 2038, 2821
ScaI	AGTACT	1 cut(s)	2360
SchI	GAGTC	5 cut(s)	756, 1037, 1336, 1945, 2519
ScrFI	CCNGG	6 cut(s)	686, 687, 1207, 1666, 1886, 2628
SduI	GDGCHC	4 cut(s)	1077, 1524, 1892, 2610
SfaNI	GCATC	3 cut(s)	369, 2185, 2693
SfcI	CTRYAG	2 cut(s)	84, 225
Sfr274I	CTCGAG	2 cut(s)	1704, 2163
SinI	GGWCC	5 cut(s)	284, 690, 1040, 1313, 2038
SlaI	CTCGAG	2 cut(s)	1704, 2163
SmaI	CCCGGG	1 cut(s)	687
SmiMI	CAYNNNNRTG	3 cut(s)	2214, 2596, 2756
SmlI	CTYRAG	4 cut(s)	568, 1704, 2163, 2295
SmoI	CTYRAG	4 cut(s)	568, 1704, 2163, 2295
SpeI	ACTAGT	2 cut(s)	596, 1648
SphI	GCATGC	1 cut(s)	129
SseBI	AGGCCT	2 cut(s)	529, 1022
SsiI	CCGC	3 cut(s)	434, 790, 2774
SspMI	CTAG	8 cut(s)	554, 597, 776, 1649, 1764, 1823, 2480, 2654
SstI	GAGCTC	1 cut(s)	1524
StuI	AGGCCT	2 cut(s)	529, 1022
StyD4I	CCNGG	6 cut(s)	684, 685, 1205, 1664, 1884, 2626
StyI	CCWWGG	4 cut(s)	459, 1573, 1945, 2259
TaaI	ACNGT	6 cut(s)	382, 679, 874, 914, 1231, 2142
TaiI	ACGT	4 cut(s)	183, 282, 726, 2467
TaqI	TCGA	9 cut(s)	423, 438, 681, 745, 824, 1705, 1927, 2164, 2484
TatI	WGTACW	2 cut(s)	849, 2358
TfiI	GAWTC	9 cut(s)	137, 416, 517, 657, 1003, 1353, 1595, 1611, 2660
Tru1I	TTAA	8 cut(s)	14, 29, 665, 1233, 1556, 1748, 1895, 1962
Tru9I	TTAA	8 cut(s)	14, 29, 665, 1233, 1556, 1748, 1895, 1962
TscAI	CASTG	6 cut(s)	493, 877, 919, 1431, 1531, 1923
TseFI	GTSAC	5 cut(s)	394, 488, 650, 982, 1831
TseI	GCWGC	7 cut(s)	108, 129, 1509, 1625, 1628, 2105, 2159
Tsp45I	GTSAC	5 cut(s)	394, 488, 650, 982, 1831
TspGWI	ACGGA	1 cut(s)	651
TspMI	CCCGGG	1 cut(s)	685
TspRI	CASTG	6 cut(s)	493, 877, 919, 1431, 1531, 1923
VneI	GTGCAC	1 cut(s)	1073
VpaK11BI	GGWCC	5 cut(s)	284, 690, 1040, 1313, 2038
XagI	CCTNNNNNAGG	1 cut(s)	2298
XapI	RAATTY	8 cut(s)	374, 1389, 1397, 1486, 1744, 1958, 2046, 2118
XbaI	TCTAGA	1 cut(s)	553
XceI	RCATGY	2 cut(s)	129, 2254
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1580, 2469
XhoI	CTCGAG	2 cut(s)	1704, 2163
XmaI	CCCGGG	1 cut(s)	685
XmiI	GTMKAC	1 cut(s)	681
XmnI	GAANNNNTTC	1 cut(s)	1401
XspI	CTAG	8 cut(s)	554, 597, 776, 1649, 1764, 1823, 2480, 2654
ZrmI	AGTACT	1 cut(s)	2360
Zsp2I	ATGCAT	1 cut(s)	2686

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.