Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0013594

Physical Location & Seq

Genomic Coordinates Reverse (-)

14398627 .. 14407522

Gene Structure 8896 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1044500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2796 bp

ATGATGAAGGAATTTGATTATTGGGTTTTAAGACTAATCGAGTTTTCGATCATCTGCCTCTTGATTCTTGTTCCATCCACTTCTGCAGATGAAGGCAGTTTTGTGAGCATTGCGTGCTGCACTGAATCGAATTACACGGATAGCAGAAACATTAGTTGGATATCGGACTATAATCAGTTTCCGAATGCCACAGGCTGTCACACAATTCAGTCAGAGGCAGACTATTCCGGTTACAACAGAAGTAGAGCATTCTACCAAAACTCAGGCCAGAAAAGATGTTATAAGCTATCAACAGAAAAGGGTGAAGACTATCTGATTAGGGCTACATTTCTATTTGGACACATTTGGAGCTCTAGTTTTTCAGTTTCGGTTGGTGTGACCCCAATTAGTGTCGTAGATTCATCGGAGGACTCAGCAGTGGTTGAAGGGATTTTTCGGGCTACCGAGGACAATACATACTTGTGCTTGGTGTATGGCAAGGGAGCTCCTTATATTTCAGAGCTTGAGTTGAGGCCTCTACAGAATTTGAAATATTATTTAGAGGACTTCCCTTCAAGCGTTCTGAAATTGGTTACAAGAAATAGTTTTGCAATTACAAAAGATGATATCAGGTACCCAAATGACACGAGTGACAGAATTTGGAAATCAAATCCAAGTGCCGACCCAGGAACCGGAACCGGAACCTATCACATATCACAACCCAACGTCTCCATTTCCGGCAACGCCACCGCGTCTCCGCCCGTGCAAGTACTACAAACAGCTCTAGCGGCTCCAGACCGACTGCTCCTTCTCCACAATGGCCTTCCCACAGAAAGTTACCAGTACCTCGTGTTCCTCTACTTCTACGAGGTCGATCGGACGGTCCAAGCCGGCGAGAGGGTGTTCGACATTTTCCTCAACGATGAGCTGAAAAAGCGGAGATTTGACGTCTCGGGAAATGGGTCCAACTACAAGGAGCTTTCTTTCACTGTCACGGCAAATGGGTCTCTGAATTTGACTCTGGTTAAGGTCTCCGGGTCGGAAAATGGACCCATTTGCAATGCTTATGAGATCTTGCAGGTACTTCCATGGCGTCCAGAGACTAATAAAAGTGATGTGGAAGTGATTTTGGAGGTGAGAAATGAGGTGCTGAAGAGTAACCAAGAGAGTGAAGTTTGGGAAGGGTGGTCTGGAGATCCATGTCTTCCAGTTCCATGGGATGGTATTACTTGTGAATCCGTTGCTGGTTATGCTGTCATTACTGTATTGGATCTATCGTCAGGTATTCAGAGGGGGGGCTTTCTTAAAGGGCCAGTTCCTTCAAGTATCACTAAGCTGACCTATCTAAGAGTCCTGAACCTTAGCCACAATGACTTTACTGGCAACATTCCAGCATTTCTTCCTTCCTCCCTGTTGACCTCAGTGGATCTGAGCTTCAATGACCTTGGGGGATCACTTCCAACATCTCTTATCTCACTGCCACATTTGGATATACTAAATATCAGGTGCAACCCTCATGTCGCAAAAGATATTCCCTCCAGCTTCAATGGCTCAACACTTACCACGGGCCAAGAAAGTTGCAGTGCTCAAGAAGCTTCTAATCAACGAATCATCATTGGTGCTGCTGCTGCATCTGGGTCTCTACTATTAACCATTGTAGTTGGGATAATTTTCTACACTTGGAGACGACACTTTCTGCCTCAAGGAAAATTTGATATGAAACAACATCATATGACAAAGAATTTAATTTTTTCGTTACCGAGCATGGATGATCTGGTTATGAAGTCGATATCCATAGAGACATTTACTCTTGAGTACATAGAGGCTGCTACCCAAAGGTACAAAACATTGATAGGTGAAGGAGGTTTTGGGTCTGTTTACCGTGGCACTTTAATTGATGGTCAGGAAGTGGCAGTGAAGGTCCGGTCAGCGACATCAACCCAAGGAACTCGGGAATTTGAGAATGAGCTAAATCTTCTGTCAGCTATTCGCCATGAGAATCTCGTGCCCCTTCTCGGTTATTGTTGCGAAAATGACCAAGAAATTCTGGTTTATCCATTTATGTCCAATGGCTCATTACAGGATCGTCTCTATGGGGAAGCAGCAAAAAGAAAAATTCTGGACTGGCCGACCAGACTCTCAATTGCTCTTGGTGCTGCTCGAGGTTTGACGCATCTTCACAATTTTGCTGGTCGCTGCATTATACATAGGGATGTGAAATCAAGTAATATACTTCTGGACCATAGCATGACTGCCAAGGTGGCGGACTTTGGTTTTTCAAAATACGCTCCTCAAGAAGGTGACAGTTGTGCTTCTCTTGAAGTAAGAGGGACAGCGGGATACTTGGATCCGGAGTACTACATGACTCATCATCTATCAGCAAAAAGTGATGTTTTTAGCTTTGGCGTTGTTCTGCTTGAAATTGTTAGCGGACGGGAACCTCTGAACATACACAGGCCACGGCCCGAGTGGAGTTTGGTTGAATGGGCAAAACCCTATGTAAGGGAATCAAAGATTGATGAAATTGTTGACCCGAACATAAAAGGAGCGTACCATGCCGAGGCCATGTGGAGAGTAGTGGAGGTGGCATTGTCATGTATTGAGCCCTTTGCCGCTTCACGACCAAACATGATTGAAATCGTAAGGGAGCTAGAGGATGCTCTGATTATAGAGAACAACGCATCAGAATACATGAGATCCATAGAGAGCTCGGGATCCAATCGCTTTTCCATGGTGATGGAGAGGAGGATTCCGCCGCCCACTCCTTCAGAACCGTCATCTATTTTGTCACAAATGGCTCCTCCAGAGCCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046777 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

932

Amino Acids

103.48

Weight (kDa)

5.26

Isoelectric Point (pI)

46.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	41 - 354	3.9e-50	Malectin-like domain
PK_Tyr_Ser-Thr	PF07714	608 - 877	6.9e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	608 - 810	7.1e-38	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013594)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g19010 FvH4_1g19010 FvH4_1g19010
malus_domestica	MD01G1044500.v1.1 MD15G1307000.v1.1
prunus_persica	Prupe.6G209400_v2.0.a1 Prupe.6G209400_v2.0.a1 Prupe.6G209400_v2.0.a1
pyrus_communis	pycom15g27100
rosa_chinensis	RchiOBHm_Chr2g0110021
rosa_laevigata	RLG00000017781
rosa_roxburghii	Rroxscaffold_2G00133770
rosa_rugosa	Rorug02G0165200
rosa_samantha	Rh2AG217000 Rh2BG226900 Rh2CG219100 Rh2DG222700
rosa_wichuraiana	Rw2G016760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	282
AatII	GACGTC	1 cut(s)	930
Acc36I	ACCTGC	1 cut(s)	1048
Acc65I	GGTACC	1 cut(s)	612
AccB1I	GGYRCC	1 cut(s)	612
AccB7I	CCANNNNNTGG	1 cut(s)	1199
AccII	CGCG	1 cut(s)	731
AccIII	TCCGGA	1 cut(s)	2329
AcoI	YGGCCR	1 cut(s)	2105
AcsI	RAATTY	9 cut(s)	11, 523, 636, 991, 1688, 1720, 1934, 2022, 2094
AcuI	CTGAAG	2 cut(s)	1151, 2730
AcyI	GRCGYC	2 cut(s)	927, 1072
AfaI	GTAC	8 cut(s)	614, 750, 824, 1062, 1796, 1820, 2336, 2531
AfiI	CCNNNNNNNGG	7 cut(s)	671, 876, 1199, 1994, 2276, 2481, 2539
AjnI	CCWGG	1 cut(s)	664
AjuI	GAANNNNNNNTTGG	4 cut(s)	139, 171, 1830, 1862
Alw21I	GWGCWC	4 cut(s)	353, 487, 1567, 2690
Ama87I	CYCGRG	5 cut(s)	931, 1929, 2139, 2444, 2689
Aor13HI	TCCGGA	1 cut(s)	2329
AoxI	GGCC	9 cut(s)	265, 512, 799, 1289, 1546, 2105, 2435, 2441, 2541
ApeKI	GCWGC	8 cut(s)	117, 1601, 1604, 1607, 1805, 2081, 2135, 2175
ApoI	RAATTY	9 cut(s)	11, 523, 636, 991, 1688, 1720, 1934, 2022, 2094
Asp718I	GGTACC	1 cut(s)	612
AspS9I	GGNCC	8 cut(s)	862, 942, 1028, 1289, 1546, 1900, 2218, 2442
AsuC2I	CCSGG	1 cut(s)	1015
AsuHPI	GGTGA	5 cut(s)	314, 1126, 1847, 2291, 2725
AvaI	CYCGRG	5 cut(s)	931, 1929, 2139, 2444, 2689
AvaII	GGWCC	5 cut(s)	862, 942, 1028, 1900, 2218
BaeGI	GKGCMC	1 cut(s)	1989
BamHI	GGATCC	2 cut(s)	2326, 2693
BanI	GGYRCC	1 cut(s)	612
BanII	GRGCYC	4 cut(s)	353, 487, 2586, 2690
BauI	CACGAG	3 cut(s)	625, 827, 1982
BbsI	GAAGAC	2 cut(s)	312, 1175
Bbv12I	GWGCWC	4 cut(s)	353, 487, 1567, 2690
BbvI	GCAGC	8 cut(s)	104, 1588, 1591, 1594, 1792, 2093, 2122, 2162
BccI	CCATC	4 cut(s)	82, 1193, 1871, 2710
BceAI	ACGGC	2 cut(s)	990, 2456
BciT130I	CCWGG	1 cut(s)	666
BciVI	GTATCC	1 cut(s)	2312
BcnI	CCSGG	1 cut(s)	1015
BfaI	CTAG	3 cut(s)	354, 764, 2630
BfmI	CTRYAG	2 cut(s)	84, 518
BfuAI	ACCTGC	1 cut(s)	1048
BfuI	GTATCC	1 cut(s)	2312
BglI	GCCNNNNNGGC	1 cut(s)	2240
BglII	AGATCT	1 cut(s)	1050
BmcAI	AGTACT	2 cut(s)	750, 2336
Bme1390I	CCNGG	2 cut(s)	666, 1015
Bme18I	GGWCC	5 cut(s)	862, 942, 1028, 1900, 2218
BmeT110I	CYCGRG	5 cut(s)	931, 1929, 2139, 2444, 2689
BmgT120I	GGNCC	8 cut(s)	862, 942, 1028, 1289, 1546, 1900, 2218, 2442
BmrFI	CCNGG	2 cut(s)	666, 1015
BmsI	GCATC	4 cut(s)	1619, 2161, 2626, 2669
BpiI	GAAGAC	2 cut(s)	312, 1175
BpmI	CTGGAG	4 cut(s)	756, 1191, 1501, 2766
Bpu10I	CCTNAGC	1 cut(s)	1340
BpuEI	CTTGAG	5 cut(s)	524, 1551, 1665, 1811, 2256
BpuMI	CCSGG	1 cut(s)	1015
BsaBI	GATNNNNATC	1 cut(s)	2615
BsaHI	GRCGYC	2 cut(s)	927, 1072
BsaI	GGTCTC	3 cut(s)	990, 1015, 1623
BsaWI	WCCGGW	5 cut(s)	227, 671, 677, 1902, 2329
BsaXI	ACNNNNNCTCC	4 cut(s)	340, 370, 718, 748
Bsc4I	CCNNNNNNNGG	7 cut(s)	671, 876, 1199, 1994, 2276, 2481, 2539
Bse118I	RCCGGY	1 cut(s)	869
Bse1I	ACTGG	5 cut(s)	820, 1187, 1292, 1363, 2108
Bse3DI	GCAATG	2 cut(s)	108, 1045
Bse8I	GATNNNNATC	1 cut(s)	2615
BseAI	TCCGGA	1 cut(s)	2329
BseBI	CCWGG	1 cut(s)	666
BseGI	GGATG	5 cut(s)	74, 1204, 1753, 2197, 2641
BseJI	GATNNNNATC	1 cut(s)	2615
BseLI	CCNNNNNNNGG	7 cut(s)	671, 876, 1199, 1994, 2276, 2481, 2539
BseMI	GCAATG	2 cut(s)	108, 1045
BseMII	CTCAG	4 cut(s)	276, 426, 1400, 1413
BseNI	ACTGG	5 cut(s)	820, 1187, 1292, 1363, 2108
BseRI	GAGGAG	3 cut(s)	2259, 2737, 2769
BseSI	GKGCMC	1 cut(s)	1989
BseXI	GCAGC	8 cut(s)	104, 1588, 1591, 1594, 1792, 2093, 2122, 2162
BsgI	GTGCAG	1 cut(s)	103
Bsh1236I	CGCG	1 cut(s)	731
Bsh1285I	CGRYCG	1 cut(s)	856
BshFI	GGCC	9 cut(s)	267, 514, 801, 1291, 1548, 2107, 2437, 2443, 2543
BshNI	GGYRCC	1 cut(s)	612
BsiEI	CGRYCG	1 cut(s)	856
BsiHKAI	GWGCWC	4 cut(s)	353, 487, 1567, 2690
BsiHKCI	CYCGRG	5 cut(s)	931, 1929, 2139, 2444, 2689
BsiSI	CCGG	8 cut(s)	228, 672, 678, 717, 870, 1014, 1903, 2330
BslFI	GGGAC	1 cut(s)	2323
BslI	CCNNNNNNNGG	7 cut(s)	671, 876, 1199, 1994, 2276, 2481, 2539
BsmBI	CGTCTC	5 cut(s)	712, 738, 934, 1657, 2072
BsmFI	GGGAC	1 cut(s)	2323
BsmI	GAATGC	2 cut(s)	190, 248
BsnI	GGCC	9 cut(s)	267, 514, 801, 1291, 1548, 2107, 2437, 2443, 2543
Bso31I	GGTCTC	3 cut(s)	990, 1015, 1623
BsoBI	CYCGRG	5 cut(s)	931, 1929, 2139, 2444, 2689
Bsp1286I	GDGCHC	6 cut(s)	353, 487, 1567, 1989, 2586, 2690
Bsp13I	TCCGGA	1 cut(s)	2329
Bsp19I	CCATGG	3 cut(s)	1067, 1193, 2709
BspANI	GGCC	9 cut(s)	267, 514, 801, 1291, 1548, 2107, 2437, 2443, 2543
BspCNI	CTCAG	4 cut(s)	275, 425, 1401, 1412
BspEI	TCCGGA	1 cut(s)	2329
BspFNI	CGCG	1 cut(s)	731
BspMAI	CTGCAG	1 cut(s)	88
BspMI	ACCTGC	1 cut(s)	1048
BspT107I	GGYRCC	1 cut(s)	612
BspTNI	GGTCTC	3 cut(s)	990, 1015, 1623
BsrDI	GCAATG	2 cut(s)	108, 1045
BsrFI	RCCGGY	1 cut(s)	869
BsrI	ACTGG	5 cut(s)	820, 1187, 1292, 1363, 2108
BssAI	RCCGGY	1 cut(s)	869
BssNI	GRCGYC	2 cut(s)	927, 1072
BssSI	CACGAG	3 cut(s)	625, 827, 1982
BssT1I	CCWWGG	6 cut(s)	1067, 1193, 1423, 1921, 2235, 2709
Bst2BI	CACGAG	3 cut(s)	625, 827, 1982
Bst2UI	CCWGG	1 cut(s)	666
Bst4CI	ACNGT	6 cut(s)	862, 970, 1243, 1862, 2285, 2754
Bst6I	CTCTTC	1 cut(s)	1127
BstACI	GRCGYC	2 cut(s)	927, 1072
BstAPI	GCANNNNNTGC	1 cut(s)	114
BstC8I	GCNNGC	2 cut(s)	115, 871
BstDEI	CTNAG	7 cut(s)	262, 412, 1311, 1325, 1340, 1399, 1409
BstDSI	CCRYGG	6 cut(s)	1067, 1193, 1542, 1861, 2438, 2709
BstENI	CCTNNNNNAGG	2 cut(s)	2274, 2479
BstF5I	GGATG	5 cut(s)	74, 1204, 1753, 2197, 2641
BstFNI	CGCG	1 cut(s)	731
BstMCI	CGRYCG	1 cut(s)	856
BstNI	CCWGG	1 cut(s)	666
BstSCI	CCNGG	2 cut(s)	664, 1013
BstSFI	CTRYAG	2 cut(s)	84, 518
BstSLI	GKGCMC	1 cut(s)	1989
BstUI	CGCG	1 cut(s)	731
BstV1I	GCAGC	8 cut(s)	104, 1588, 1591, 1594, 1792, 2093, 2122, 2162
BstV2I	GAAGAC	2 cut(s)	312, 1175
BstX2I	RGATCY	7 cut(s)	1050, 1174, 1249, 1405, 2326, 2675, 2693
BstXI	CCANNNNNNTGG	2 cut(s)	1194, 2716
BstYI	RGATCY	7 cut(s)	1050, 1174, 1249, 1405, 2326, 2675, 2693
BsuI	GTATCC	1 cut(s)	2312
BsuRI	GGCC	9 cut(s)	267, 514, 801, 1291, 1548, 2107, 2437, 2443, 2543
BtgI	CCRYGG	6 cut(s)	1067, 1193, 1542, 1861, 2438, 2709
BtsCI	GGATG	5 cut(s)	74, 1204, 1753, 2197, 2641
BtsI	GCAGTG	4 cut(s)	423, 1454, 1567, 1899
BtsIMutI	CAGTG	7 cut(s)	120, 423, 966, 1407, 1454, 1567, 1899
BveI	ACCTGC	1 cut(s)	1048
Cac8I	GCNNGC	2 cut(s)	115, 871
Cfr10I	RCCGGY	1 cut(s)	869
Cfr13I	GGNCC	8 cut(s)	862, 942, 1028, 1289, 1546, 1900, 2218, 2442
CseI	GACGC	3 cut(s)	720, 1061, 2158
Csp6I	GTAC	8 cut(s)	613, 749, 823, 1061, 1795, 1819, 2335, 2530
CviQI	GTAC	8 cut(s)	613, 749, 823, 1061, 1795, 1819, 2335, 2530
DdeI	CTNAG	7 cut(s)	262, 412, 1311, 1325, 1340, 1399, 1409
EaeI	YGGCCR	1 cut(s)	2105
Eam1104I	CTCTTC	1 cut(s)	1127
EarI	CTCTTC	1 cut(s)	1127
EciI	GGCGGA	3 cut(s)	726, 2258, 2721
Ecl136II	GAGCTC	3 cut(s)	351, 485, 2688
Eco130I	CCWWGG	6 cut(s)	1067, 1193, 1423, 1921, 2235, 2709
Eco147I	AGGCCT	1 cut(s)	514
Eco24I	GRGCYC	4 cut(s)	353, 487, 2586, 2690
Eco31I	GGTCTC	3 cut(s)	990, 1015, 1623
Eco32I	GATATC	3 cut(s)	162, 607, 1770
Eco47I	GGWCC	5 cut(s)	862, 942, 1028, 1900, 2218
Eco53kI	GAGCTC	3 cut(s)	351, 485, 2688
Eco57I	CTGAAG	2 cut(s)	1151, 2730
Eco88I	CYCGRG	5 cut(s)	931, 1929, 2139, 2444, 2689
EcoICRI	GAGCTC	3 cut(s)	351, 485, 2688
EcoNI	CCTNNNNNAGG	2 cut(s)	2274, 2479
EcoRII	CCWGG	1 cut(s)	664
EcoRV	GATATC	3 cut(s)	162, 607, 1770
EcoT14I	CCWWGG	6 cut(s)	1067, 1193, 1423, 1921, 2235, 2709
EcoT38I	GRGCYC	4 cut(s)	353, 487, 2586, 2690
ErhI	CCWWGG	6 cut(s)	1067, 1193, 1423, 1921, 2235, 2709
Esp3I	CGTCTC	5 cut(s)	712, 738, 934, 1657, 2072
FaqI	GGGAC	1 cut(s)	2323
FauI	CCCGC	1 cut(s)	2308
FauNDI	CATATG	1 cut(s)	1710
FokI	GGATG	5 cut(s)	61, 1211, 1760, 2204, 2648
FriOI	GRGCYC	4 cut(s)	353, 487, 2586, 2690
FspBI	CTAG	3 cut(s)	354, 764, 2630
GsuI	CTGGAG	4 cut(s)	756, 1191, 1501, 2766
HaeIII	GGCC	9 cut(s)	267, 514, 801, 1291, 1548, 2107, 2437, 2443, 2543
HapII	CCGG	8 cut(s)	228, 672, 678, 717, 870, 1014, 1903, 2330
HgaI	GACGC	3 cut(s)	720, 1061, 2158
Hin1I	GRCGYC	2 cut(s)	927, 1072
HincII	GTYRAC	2 cut(s)	1395, 2509
HindII	GTYRAC	2 cut(s)	1395, 2509
HindIII	AAGCTT	1 cut(s)	1572
HpaII	CCGG	8 cut(s)	228, 672, 678, 717, 870, 1014, 1903, 2330
HphI	GGTGA	5 cut(s)	314, 1126, 1847, 2291, 2725
Hpy166II	GTNNAC	3 cut(s)	1395, 1858, 2509
Hpy8I	GTNNAC	3 cut(s)	1395, 1858, 2509
HpyCH4III	ACNGT	6 cut(s)	862, 970, 1243, 1862, 2285, 2754
HpyCH4IV	ACGT	2 cut(s)	705, 927
HpyF3I	CTNAG	7 cut(s)	262, 412, 1311, 1325, 1340, 1399, 1409
HpySE526I	ACGT	2 cut(s)	705, 927
Hsp92I	GRCGYC	2 cut(s)	927, 1072
Kpn2I	TCCGGA	1 cut(s)	2329
KpnI	GGTACC	1 cut(s)	616
KroI	GCCGGC	1 cut(s)	869
KroNI	GCCGGC	1 cut(s)	871
Lsp1109I	GCAGC	8 cut(s)	104, 1588, 1591, 1594, 1792, 2093, 2122, 2162
LweI	GCATC	4 cut(s)	1619, 2161, 2626, 2669
MaeI	CTAG	3 cut(s)	354, 764, 2630
MaeII	ACGT	2 cut(s)	705, 927
MboII	GAAGA	6 cut(s)	317, 1144, 1175, 1370, 1946, 2147
MfeI	CAATTG	1 cut(s)	2121
MflI	RGATCY	7 cut(s)	1050, 1174, 1249, 1405, 2326, 2675, 2693
MhlI	GDGCHC	6 cut(s)	353, 487, 1567, 1989, 2586, 2690
MlyI	GAGTC	5 cut(s)	404, 991, 1338, 2109, 2338
MmeI	TCCRAC	4 cut(s)	137, 969, 999, 1463
MroI	TCCGGA	1 cut(s)	2329
MroNI	GCCGGC	1 cut(s)	869
MseI	TTAA	6 cut(s)	29, 1005, 1284, 1628, 1724, 1871
MslI	CAYNNNNRTG	4 cut(s)	460, 2190, 2572, 2714
MspA1I	CMGCKG	1 cut(s)	2315
MspI	CCGG	8 cut(s)	228, 672, 678, 717, 870, 1014, 1903, 2330
MspR9I	CCNGG	2 cut(s)	666, 1015
MunI	CAATTG	1 cut(s)	2121
Mva1269I	GAATGC	2 cut(s)	190, 248
MvaI	CCWGG	1 cut(s)	666
MvnI	CGCG	1 cut(s)	731
NaeI	GCCGGC	1 cut(s)	871
NciI	CCSGG	1 cut(s)	1015
NcoI	CCATGG	3 cut(s)	1067, 1193, 2709
NdeI	CATATG	1 cut(s)	1710
NgoMIV	GCCGGC	1 cut(s)	869
NmeAIII	GCCGAG	1 cut(s)	2563
NmuCI	GTSAC	6 cut(s)	197, 376, 629, 970, 2279, 2766
PaeR7I	CTCGAG	1 cut(s)	2139
PceI	AGGCCT	1 cut(s)	514
PctI	GAATGC	2 cut(s)	190, 248
PdiI	GCCGGC	1 cut(s)	871
PfeI	GAWTC	8 cut(s)	64, 125, 398, 1214, 1587, 1978, 2486, 2728
PflMI	CCANNNNNTGG	1 cut(s)	1199
Ple19I	CGATCG	1 cut(s)	856
PleI	GAGTC	5 cut(s)	404, 991, 1337, 2109, 2338
PpsI	GAGTC	5 cut(s)	404, 991, 1337, 2109, 2338
PsiI	TTATAA	1 cut(s)	282
Psp124BI	GAGCTC	3 cut(s)	353, 487, 2690
Psp6I	CCWGG	1 cut(s)	664
PspGI	CCWGG	1 cut(s)	664
PspPI	GGNCC	8 cut(s)	862, 942, 1028, 1289, 1546, 1900, 2218, 2442
PspXI	VCTCGAGB	1 cut(s)	2139
PsrI	GAACNNNNNNTAC	2 cut(s)	815, 847
PstI	CTGCAG	1 cut(s)	88
PsuI	RGATCY	7 cut(s)	1050, 1174, 1249, 1405, 2326, 2675, 2693
PvuI	CGATCG	1 cut(s)	856
RsaI	GTAC	8 cut(s)	614, 750, 824, 1062, 1796, 1820, 2336, 2531
RsaNI	GTAC	8 cut(s)	613, 749, 823, 1061, 1795, 1819, 2335, 2530
RseI	CAYNNNNRTG	4 cut(s)	460, 2190, 2572, 2714
SacI	GAGCTC	3 cut(s)	353, 487, 2690
SaqAI	TTAA	6 cut(s)	29, 1005, 1284, 1628, 1724, 1871
Sau96I	GGNCC	8 cut(s)	862, 942, 1028, 1289, 1546, 1900, 2218, 2442
ScaI	AGTACT	2 cut(s)	750, 2336
SchI	GAGTC	5 cut(s)	404, 991, 1338, 2109, 2338
ScrFI	CCNGG	2 cut(s)	666, 1015
SduI	GDGCHC	6 cut(s)	353, 487, 1567, 1989, 2586, 2690
SfaNI	GCATC	4 cut(s)	1619, 2161, 2626, 2669
SfcI	CTRYAG	2 cut(s)	84, 518
Sfr274I	CTCGAG	1 cut(s)	2139
SinI	GGWCC	5 cut(s)	862, 942, 1028, 1900, 2218
SlaI	CTCGAG	1 cut(s)	2139
SmiMI	CAYNNNNRTG	4 cut(s)	460, 2190, 2572, 2714
SmlI	CTYRAG	6 cut(s)	503, 1566, 1680, 1790, 2139, 2271
SmoI	CTYRAG	6 cut(s)	503, 1566, 1680, 1790, 2139, 2271
SseBI	AGGCCT	1 cut(s)	514
SspI	AATATT	1 cut(s)	533
SspMI	CTAG	3 cut(s)	354, 764, 2630
SstI	GAGCTC	3 cut(s)	353, 487, 2690
StuI	AGGCCT	1 cut(s)	514
StyD4I	CCNGG	2 cut(s)	664, 1013
StyI	CCWWGG	6 cut(s)	1067, 1193, 1423, 1921, 2235, 2709
TaaI	ACNGT	6 cut(s)	862, 970, 1243, 1862, 2285, 2754
TaiI	ACGT	2 cut(s)	708, 930
TaqI	TCGA	7 cut(s)	39, 47, 128, 852, 885, 1766, 2140
TaqII	GACCGA	1 cut(s)	792
TatI	WGTACW	3 cut(s)	748, 1794, 2334
TauI	GCSGC	3 cut(s)	770, 2594, 2737
TfiI	GAWTC	8 cut(s)	64, 125, 398, 1214, 1587, 1978, 2486, 2728
Tru1I	TTAA	6 cut(s)	29, 1005, 1284, 1628, 1724, 1871
Tru9I	TTAA	6 cut(s)	29, 1005, 1284, 1628, 1724, 1871
TscAI	CASTG	7 cut(s)	127, 423, 973, 1407, 1461, 1567, 1899
TseFI	GTSAC	6 cut(s)	197, 376, 629, 970, 2279, 2766
TseI	GCWGC	8 cut(s)	117, 1601, 1604, 1607, 1805, 2081, 2135, 2175
Tsp45I	GTSAC	6 cut(s)	197, 376, 629, 970, 2279, 2766
TspDTI	ATGAA	6 cut(s)	20, 105, 390, 1712, 1775, 2514
TspGWI	ACGGA	2 cut(s)	152, 1207
TspRI	CASTG	7 cut(s)	127, 423, 973, 1407, 1461, 1567, 1899
Van91I	CCANNNNNTGG	1 cut(s)	1199
VpaK11BI	GGWCC	5 cut(s)	862, 942, 1028, 1900, 2218
XagI	CCTNNNNNAGG	2 cut(s)	2274, 2479
XapI	RAATTY	9 cut(s)	11, 523, 636, 991, 1688, 1720, 1934, 2022, 2094
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2445
XhoI	CTCGAG	1 cut(s)	2139
XspI	CTAG	3 cut(s)	354, 764, 2630
ZraI	GACGTC	1 cut(s)	928
ZrmI	AGTACT	2 cut(s)	750, 2336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.