Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0013594

Physical Location & Seq

Genomic Coordinates Forward (+)

22106118 .. 22113741

Gene Structure 7624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG226900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2817 bp

ATGATGAAGCAATTAAACATTTGGGTTTTAAGACTGACAGAGTTCTTCATACTTTGCCTCTTCATTTTTAATCCATTGACTTCTGCAGATGAAGGCAGTAATTCAAGCAGCTTTGTGAGTATTGCATGCTGCTCAGAATCTAATTTTACAGATATAAGAAACATAAGTTGGGTAACAGACTTTAATGAGTTTCGTAATAGGCTAAGTTGTGAGGACAGAAAGCCAATTGCGATTGATTATGTTAACAATAAAACAAGGGTCTTTCACGTTGGTCCAAATCAGAAAAGATGTTATACTTTACCATCAAAAAAGGGTGAAGACTATCTAATAAGGGGTATTTTCGGAGGCATCTGGGGAGTGAAATTTACAGTTGCCGTTGGTGTGACCACAATCGGAGTAGTAGATACATCCGATGATTTAGCGGTTGAGGGAATCTTTAGAGCTACCAAGGACTACACACACTTTTGCTTGGTAAGTGACGAAGGAGCACTTTATATTTCAGAGATTCAGTTGAGGCCTCTGTGGAACTTGGGTTACTATCTAGAGGACTTCTCTTCAAGTGTTCTGGAACTGCTTAAAAGGACTAGTTTTGATGATATAAGAGCAGCAAAGTTCATCAGGTACGAAGCTGATCCGAGTGACAGAATCTGGTTAACAAACTCAACTGTCGACCTGGGAACCTTCCACATAACAGAAGAACCCAATGTCAACGTTCTGGGCGTCACAGATGCTCGAGTACCCATTCAAGTGCTCCAAACAGCTCTAGCTTCTTCAGACCGCTTGGTCATTCTTCACGATGGCCTGTCCTCAACAAACAATCACTACCTTTTGTTCCTGTACTTCTATGAAGTCAATCACACTGTTCAAGCTGGGAAGAGGGTTTTTGATGTTTACTTGAACAGTAAGCTGAGACGGCAAGGATTTGATGTTATGGGTAATGGGTCAAATTACAGGGAGCTTGCTTTGAATGTGACAGCAAATGGGTATCTGAATCTGACTCTGGTTAAGGCGTCTGAGTCTGAAAATGGACCCATTTGCAATGCCTATGAGATTTTGCAGGTGCACCAGTTGGTTCAAGAGACTAACACAGATGACGTGGAAGTGATTTTGGAGGTGAGGAGTGAGTTGCTGGAGAATAATCAGATGAATGAAGTTTGGGAAGGGTGGACTGCAGACCCATGTCTTCCTGTTCCCTGGAATGGTATAGGTTGTGAAACTGTTAATGGTGTCACTGTCATTACCAAACTGGATCTTTCTTCTGGCATTCAGAGAGGGTCTGATGAAGAACGCAAACTTATAGGACCATTTCCTAAAAGCATCACTAAGCTGACTCACCTAAAATTCCTGAACCTCAGCAACAATGGGTTTATTGGCCAAATTCCAGAATTTCTTGAACGTTCCATGTTGATTTCAGTGGATCTGAGCCATAATAATCTTTCGGGGCCACTTCCAAATTCTCTTGCCTCACAACCAAATTTGGAAACACTAAATTTTGGCTGCAATCCTCAGCTTACCAAAGTTAGTCCATCAACCTTCAATGGCTTAAACTTTACAACAGACCATGGAAATTGTGGTGTGACTGGTGTCCAAAAATTCTCGAAACGAGGAATCATCATTAGTGCTGCTGCTGCATCTGGATCTTTACTAGTAACAGCTGTAGCCGGGATTTTTTTTTTCATGTGGAGACAAAAGTTTATGCCTCGAGGAAAATTTGATAAGAACCCGTATCCCATGGCAAAGAATTTAATTTTCTCATTACCTAGCATGGATGATCTGATGATGAAATCAATAGCAATAGAGACATTTGCTCTTGAGTACCTAGAGGCTGTCACCCAAAGTTACAAAACGCTGATAGGTGAAGGAGGTTTTGGGTCTGTTTACAGTGGCACTCTAACTGATGGTCAGGAAGTGGCAGTGAAGGTTCGATCAGCAACATCAACCCAAGGGACTCGGGAGTTTGATAATGAGCTAAATCTTCTTTCAACTATTCGGCATGAGAACCTTGTGCCTCTTCTTGGTTATTGTAACGAAAAGGACCAAGAAATTCTTGTTTATCCATTTATGTCCAATGGCTCTCTGCAAGATCGCCTATATGGGGAAGCAGCAAAAAGGAAAATTCTGGACTGGCCAACAAGACTATCAATTGCTCTTGGTGCTGCTCGAGGTTTGACACATCTGCACAATTTTGCTGGGCGTTGCATTATACATAGGGATGTGAAATCAAGTAATATACTTCTGGATCAAAGCATGTGTGCCAAGGTGGCAGACTTTGGTTTTTCAAAATATGCTCCTCAAGAAGGTGACAGTGGTGCTTCTCTGGAAGTTAGAGGGACAGCTGGATACCTGGATCCAGAGTACTACACAACCCATCATTTATCAGCAAAAAGTGATGTGTTTAGCTTTGGCGTGGTTCTACTTGAAATTGTTACTGGTCGGGAACCTCTGAACATACACAGGCCACGTCCCGAGTGGAGCTTAGTCGAATGGGCGAAACCCTATATAAGAGAGTCAAAGATTGATGAAATTGTGGATCCAAACATAAAAGGAGCATACCATGCAGAAGCTATGTGGAGGGTGGTGGAGGTAGCATTGTCATGTATTGAGCCCTTCTCTGCTTACCGACCAGGCATGGCTGACATTGTTCGCGAGCTAGAGGATTCTCTGATAATAGAGAACAATGCATCAGAATACATGAGATCCATAGAAAGTACTGGATCTAATCGCTTTTCCATAATCATGGACAGAAGGATACCGCCACCAACTCCTTCGGAACCCTCAACTATTTTGACACAAATGGCCCCTCCAGAGCCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046777 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

938

Amino Acids

104.84

Weight (kDa)

5.38

Isoelectric Point (pI)

35.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	49 - 354	3e-34	Malectin-like domain
Malectin	PF11721	268 - 312	1.3e-06	Malectin domain
PK_Tyr_Ser-Thr	PF07714	615 - 884	3.1e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	615 - 817	2.3e-39	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013594)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g19010 FvH4_1g19010 FvH4_1g19010
malus_domestica	MD01G1044500.v1.1 MD15G1307000.v1.1
prunus_persica	Prupe.6G209400_v2.0.a1 Prupe.6G209400_v2.0.a1 Prupe.6G209400_v2.0.a1
pyrus_communis	pycom15g27100
rosa_chinensis	RchiOBHm_Chr2g0110021
rosa_laevigata	RLG00000017781
rosa_roxburghii	Rroxscaffold_2G00133770
rosa_rugosa	Rorug02G0165200
rosa_samantha	Rh2AG217000 Rh2BG226900 Rh2CG219100 Rh2DG222700
rosa_wichuraiana	Rw2G016760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1048
AasI	GACNNNNNNGTC	1 cut(s)	782
AbsI	CCTCGAGG	1 cut(s)	1701
Acc36I	ACCTGC	1 cut(s)	1048
AccI	GTMKAC	1 cut(s)	669
AccII	CGCG	1 cut(s)	2646
AciI	CCGC	3 cut(s)	422, 778, 2753
AclI	AACGTT	2 cut(s)	711, 1396
AcoI	YGGCCR	2 cut(s)	1372, 2126
AcuI	CTGAAG	1 cut(s)	756
AcyI	GRCGYC	2 cut(s)	720, 1010
AfaI	GTAC	6 cut(s)	623, 738, 839, 1817, 2357, 2710
AfiI	CCNNNNNNNGG	4 cut(s)	1199, 2015, 2095, 2297
AhlI	ACTAGT	2 cut(s)	584, 1645
AjiI	CACGTC	2 cut(s)	1096, 2462
AjnI	CCWGG	4 cut(s)	672, 1193, 2343, 2623
AjuI	GAANNNNNNNTTGG	4 cut(s)	151, 183, 1851, 1883
Alw21I	GWGCWC	3 cut(s)	490, 753, 1065
Alw26I	GTCTC	4 cut(s)	904, 1073, 1678, 1793
Alw44I	GTGCAC	1 cut(s)	1061
AlwNI	CAGNNNCTG	1 cut(s)	648
Ama87I	CYCGRG	5 cut(s)	732, 1701, 1950, 2160, 2465
AoxI	GGCC	7 cut(s)	515, 799, 1372, 1442, 2126, 2456, 2796
ApaLI	GTGCAC	1 cut(s)	1061
ApeKI	GCWGC	9 cut(s)	108, 129, 605, 1497, 1622, 1625, 1628, 2102, 2156
AspS9I	GGNCC	6 cut(s)	272, 1028, 1301, 1442, 2035, 2797
AsuC2I	CCSGG	1 cut(s)	1663
AsuHPI	GGTGA	6 cut(s)	326, 1126, 1325, 1822, 1868, 2312
AvaI	CYCGRG	5 cut(s)	732, 1701, 1950, 2160, 2465
AvaII	GGWCC	4 cut(s)	272, 1028, 1301, 2035
BaeGI	GKGCMC	1 cut(s)	1065
BalI	TGGCCA	2 cut(s)	1374, 2128
BamHI	GGATCC	2 cut(s)	2347, 2530
BanII	GRGCYC	1 cut(s)	2607
BbsI	GAAGAC	2 cut(s)	324, 1175
Bbv12I	GWGCWC	3 cut(s)	490, 753, 1065
BbvCI	CCTCAGC	2 cut(s)	1352, 1506
BbvI	GCAGC	9 cut(s)	116, 120, 617, 1484, 1609, 1612, 1615, 2114, 2143
BccI	CCATC	5 cut(s)	310, 791, 1534, 1892, 2376
BceAI	ACGGC	2 cut(s)	359, 929
BciT130I	CCWGG	4 cut(s)	674, 1195, 2345, 2625
BciVI	GTATCC	3 cut(s)	1737, 2333, 2742
BcnI	CCSGG	1 cut(s)	1663
BcoDI	GTCTC	4 cut(s)	904, 1073, 1678, 1793
BcuI	ACTAGT	2 cut(s)	584, 1645
BfaI	CTAG	7 cut(s)	542, 585, 764, 1646, 1761, 1820, 2651
BfmI	CTRYAG	3 cut(s)	84, 1170, 1656
BfuAI	ACCTGC	1 cut(s)	1048
BfuI	GTATCC	3 cut(s)	1737, 2333, 2742
BglI	GCCNNNNNGGC	1 cut(s)	2261
BisI	GCNGC	9 cut(s)	109, 130, 606, 1498, 1623, 1626, 1629, 2103, 2157
BlsI	GCNGC	9 cut(s)	110, 131, 607, 1499, 1624, 1627, 1630, 2104, 2158
BmcAI	AGTACT	2 cut(s)	2357, 2710
Bme1390I	CCNGG	5 cut(s)	674, 1195, 1663, 2345, 2625
Bme18I	GGWCC	4 cut(s)	272, 1028, 1301, 2035
BmeT110I	CYCGRG	5 cut(s)	732, 1701, 1950, 2160, 2465
BmgBI	CACGTC	2 cut(s)	1096, 2462
BmgT120I	GGNCC	6 cut(s)	272, 1028, 1301, 1442, 2035, 2797
BmiI	GGNNCC	8 cut(s)	679, 1030, 1443, 2349, 2439, 2532, 2772, 2799
BmrFI	CCNGG	5 cut(s)	674, 1195, 1663, 2345, 2625
BmsI	GCATC	5 cut(s)	357, 718, 1326, 1640, 2690
BoxI	GACNNNNGTC	2 cut(s)	1179, 1583
BpiI	GAAGAC	2 cut(s)	324, 1175
BplI	GAGNNNNNCTC	4 cut(s)	536, 568, 2594, 2626
BpmI	CTGGAG	2 cut(s)	1151, 2787
Bpu10I	CCTNAGC	2 cut(s)	1352, 1506
BpuEI	CTTGAG	2 cut(s)	1832, 2277
BpuMI	CCSGG	1 cut(s)	1663
BsaHI	GRCGYC	2 cut(s)	720, 1010
BsaJI	CCNNGG	7 cut(s)	447, 673, 1193, 1561, 1731, 1942, 2256
Bsc4I	CCNNNNNNNGG	4 cut(s)	1199, 2015, 2095, 2297
Bse1I	ACTGG	6 cut(s)	1066, 1251, 1585, 2129, 2434, 2716
Bse3DI	GCAATG	1 cut(s)	1045
BseBI	CCWGG	4 cut(s)	674, 1195, 2345, 2625
BseDI	CCNNGG	7 cut(s)	447, 673, 1193, 1561, 1731, 1942, 2256
BseGI	GGATG	3 cut(s)	407, 1774, 2218
BseLI	CCNNNNNNNGG	4 cut(s)	1199, 2015, 2095, 2297
BseMI	GCAATG	1 cut(s)	1045
BseMII	CTCAG	6 cut(s)	147, 899, 1005, 1366, 1412, 1520
BseNI	ACTGG	6 cut(s)	1066, 1251, 1585, 2129, 2434, 2716
BseRI	GAGGAG	2 cut(s)	1132, 2280
BseSI	GKGCMC	1 cut(s)	1065
BseXI	GCAGC	9 cut(s)	116, 120, 617, 1484, 1609, 1612, 1615, 2114, 2143
BseYI	CCCAGC	2 cut(s)	869, 2189
BsgI	GTGCAG	1 cut(s)	2162
Bsh1236I	CGCG	1 cut(s)	2646
BshFI	GGCC	7 cut(s)	517, 801, 1374, 1444, 2128, 2458, 2798
BsiHKAI	GWGCWC	3 cut(s)	490, 753, 1065
BsiHKCI	CYCGRG	5 cut(s)	732, 1701, 1950, 2160, 2465
BsiSI	CCGG	1 cut(s)	1662
BslFI	GGGAC	3 cut(s)	1960, 2344, 2448
BslI	CCNNNNNNNGG	4 cut(s)	1199, 2015, 2095, 2297
BsmAI	GTCTC	4 cut(s)	904, 1073, 1678, 1793
BsmBI	CGTCTC	1 cut(s)	904
BsmFI	GGGAC	3 cut(s)	1960, 2344, 2448
BsmI	GAATGC	1 cut(s)	1263
BsnI	GGCC	7 cut(s)	517, 801, 1374, 1444, 2128, 2458, 2798
BsoBI	CYCGRG	5 cut(s)	732, 1701, 1950, 2160, 2465
Bsp1286I	GDGCHC	4 cut(s)	490, 753, 1065, 2607
Bsp19I	CCATGG	2 cut(s)	1561, 1731
Bsp68I	TCGCGA	1 cut(s)	2646
BspACI	CCGC	3 cut(s)	422, 778, 2753
BspANI	GGCC	7 cut(s)	517, 801, 1374, 1444, 2128, 2458, 2798
BspCNI	CTCAG	6 cut(s)	146, 900, 1006, 1365, 1413, 1519
BspFNI	CGCG	1 cut(s)	2646
BspLI	GGNNCC	8 cut(s)	679, 1030, 1443, 2349, 2439, 2532, 2772, 2799
BspMAI	CTGCAG	2 cut(s)	88, 1174
BspMI	ACCTGC	1 cut(s)	1048
BsrDI	GCAATG	1 cut(s)	1045
BsrI	ACTGG	6 cut(s)	1066, 1251, 1585, 2129, 2434, 2716
BssECI	CCNNGG	7 cut(s)	447, 673, 1193, 1561, 1731, 1942, 2256
BssNI	GRCGYC	2 cut(s)	720, 1010
BssT1I	CCWWGG	5 cut(s)	447, 1561, 1731, 1942, 2256
Bst2UI	CCWGG	4 cut(s)	674, 1195, 2345, 2625
Bst4CI	ACNGT	8 cut(s)	370, 667, 862, 902, 1219, 1234, 1883, 2306
Bst6I	CTCTTC	4 cut(s)	65, 559, 869, 2016
BstACI	GRCGYC	2 cut(s)	720, 1010
BstAPI	GCANNNNNTGC	1 cut(s)	2555
BstC8I	GCNNGC	3 cut(s)	127, 960, 2648
BstDEI	CTNAG	9 cut(s)	133, 203, 908, 1014, 1323, 1352, 1421, 1506, 2476
BstDSI	CCRYGG	2 cut(s)	1561, 1731
BstENI	CCTNNNNNAGG	1 cut(s)	2295
BstF5I	GGATG	3 cut(s)	407, 1774, 2218
BstFNI	CGCG	1 cut(s)	2646
BstMAI	GTCTC	4 cut(s)	904, 1073, 1678, 1793
BstMWI	GCNNNNNNNGC	5 cut(s)	913, 1628, 2153, 2261, 2555
BstNI	CCWGG	4 cut(s)	674, 1195, 2345, 2625
BstNSI	RCATGY	2 cut(s)	129, 2251
BstPAI	GACNNNNGTC	2 cut(s)	1179, 1583
BstSCI	CCNGG	5 cut(s)	672, 1193, 1661, 2343, 2623
BstSFI	CTRYAG	3 cut(s)	84, 1170, 1656
BstSLI	GKGCMC	1 cut(s)	1065
BstUI	CGCG	1 cut(s)	2646
BstV1I	GCAGC	9 cut(s)	116, 120, 617, 1484, 1609, 1612, 1615, 2114, 2143
BstV2I	GAAGAC	2 cut(s)	324, 1175
BstX2I	RGATCY	7 cut(s)	1249, 1417, 1637, 2347, 2530, 2696, 2714
BstXI	CCANNNNNNTGG	1 cut(s)	2737
BstYI	RGATCY	7 cut(s)	1249, 1417, 1637, 2347, 2530, 2696, 2714
BsuI	GTATCC	3 cut(s)	1737, 2333, 2742
BsuRI	GGCC	7 cut(s)	517, 801, 1374, 1444, 2128, 2458, 2798
BtgI	CCRYGG	2 cut(s)	1561, 1731
BtrI	CACGTC	2 cut(s)	1096, 2462
BtsCI	GGATG	3 cut(s)	407, 1774, 2218
BtsI	GCAGTG	1 cut(s)	1920
BtsIMutI	CAGTG	6 cut(s)	858, 1230, 1419, 1888, 1920, 2311
BtuMI	TCGCGA	1 cut(s)	2646
BveI	ACCTGC	1 cut(s)	1048
Cac8I	GCNNGC	3 cut(s)	127, 960, 2648
CaiI	CAGNNNCTG	1 cut(s)	648
Cfr13I	GGNCC	6 cut(s)	272, 1028, 1301, 1442, 2035, 2797
CseI	GACGC	2 cut(s)	709, 999
Csp6I	GTAC	6 cut(s)	622, 737, 838, 1816, 2356, 2709
CviQI	GTAC	6 cut(s)	622, 737, 838, 1816, 2356, 2709
DdeI	CTNAG	9 cut(s)	133, 203, 908, 1014, 1323, 1352, 1421, 1506, 2476
DrdI	GACNNNNNNGTC	1 cut(s)	782
DseDI	GACNNNNNNGTC	1 cut(s)	782
EaeI	YGGCCR	2 cut(s)	1372, 2126
Eam1104I	CTCTTC	4 cut(s)	65, 559, 869, 2016
EarI	CTCTTC	4 cut(s)	65, 559, 869, 2016
Eco130I	CCWWGG	5 cut(s)	447, 1561, 1731, 1942, 2256
Eco147I	AGGCCT	1 cut(s)	517
Eco24I	GRGCYC	1 cut(s)	2607
Eco47I	GGWCC	4 cut(s)	272, 1028, 1301, 2035
Eco57I	CTGAAG	1 cut(s)	756
Eco88I	CYCGRG	5 cut(s)	732, 1701, 1950, 2160, 2465
EcoNI	CCTNNNNNAGG	1 cut(s)	2295
EcoRII	CCWGG	4 cut(s)	672, 1193, 2343, 2623
EcoT14I	CCWWGG	5 cut(s)	447, 1561, 1731, 1942, 2256
EcoT22I	ATGCAT	1 cut(s)	2683
EcoT38I	GRGCYC	1 cut(s)	2607
ErhI	CCWWGG	5 cut(s)	447, 1561, 1731, 1942, 2256
Esp3I	CGTCTC	1 cut(s)	904
FalI	AAGNNNNNCTT	4 cut(s)	474, 506, 2031, 2063
FaqI	GGGAC	3 cut(s)	1960, 2344, 2448
FblI	GTMKAC	1 cut(s)	669
Fnu4HI	GCNGC	9 cut(s)	109, 130, 606, 1498, 1623, 1626, 1629, 2103, 2157
FokI	GGATG	3 cut(s)	394, 1781, 2225
FriOI	GRGCYC	1 cut(s)	2607
Fsp4HI	GCNGC	9 cut(s)	109, 130, 606, 1498, 1623, 1626, 1629, 2103, 2157
FspBI	CTAG	7 cut(s)	542, 585, 764, 1646, 1761, 1820, 2651
GluI	GCNGC	9 cut(s)	109, 130, 606, 1498, 1623, 1626, 1629, 2103, 2157
GsaI	CCCAGC	2 cut(s)	873, 2193
GsuI	CTGGAG	2 cut(s)	1151, 2787
HaeIII	GGCC	7 cut(s)	517, 801, 1374, 1444, 2128, 2458, 2798
HapII	CCGG	1 cut(s)	1662
HgaI	GACGC	2 cut(s)	709, 999
Hin1I	GRCGYC	2 cut(s)	720, 1010
HincII	GTYRAC	4 cut(s)	244, 654, 670, 709
HindII	GTYRAC	4 cut(s)	244, 654, 670, 709
HpaI	GTTAAC	2 cut(s)	244, 654
HpaII	CCGG	1 cut(s)	1662
HphI	GGTGA	6 cut(s)	326, 1126, 1325, 1822, 1868, 2312
Hpy166II	GTNNAC	8 cut(s)	244, 654, 670, 709, 892, 1063, 1167, 1879
Hpy8I	GTNNAC	8 cut(s)	244, 654, 670, 709, 892, 1063, 1167, 1879
HpyCH4III	ACNGT	8 cut(s)	370, 667, 862, 902, 1219, 1234, 1883, 2306
HpyCH4IV	ACGT	5 cut(s)	267, 711, 1095, 1396, 2461
HpyF10VI	GCNNNNNNNGC	5 cut(s)	913, 1628, 2153, 2261, 2555
HpyF3I	CTNAG	9 cut(s)	133, 203, 908, 1014, 1323, 1352, 1421, 1506, 2476
HpySE526I	ACGT	5 cut(s)	267, 711, 1095, 1396, 2461
Hsp92I	GRCGYC	2 cut(s)	720, 1010
KspAI	GTTAAC	2 cut(s)	244, 654
LmnI	GCTCC	6 cut(s)	485, 756, 955, 2293, 2472, 2546
Lsp1109I	GCAGC	9 cut(s)	116, 120, 617, 1484, 1609, 1612, 1615, 2114, 2143
LweI	GCATC	5 cut(s)	357, 718, 1326, 1640, 2690
MaeI	CTAG	7 cut(s)	542, 585, 764, 1646, 1761, 1820, 2651
MaeII	ACGT	5 cut(s)	267, 711, 1095, 1396, 2461
MfeI	CAATTG	2 cut(s)	225, 2142
MflI	RGATCY	7 cut(s)	1249, 1417, 1637, 2347, 2530, 2696, 2714
MhlI	GDGCHC	4 cut(s)	490, 753, 1065, 2607
MlsI	TGGCCA	2 cut(s)	1374, 2128
MluNI	TGGCCA	2 cut(s)	1374, 2128
MlyI	GAGTC	5 cut(s)	991, 1025, 1324, 1942, 2516
Mox20I	TGGCCA	2 cut(s)	1374, 2128
Mph1103I	ATGCAT	1 cut(s)	2683
MscI	TGGCCA	2 cut(s)	1374, 2128
MslI	CAYNNNNRTG	4 cut(s)	746, 2211, 2593, 2735
Msp20I	TGGCCA	2 cut(s)	1374, 2128
MspA1I	CMGCKG	2 cut(s)	1655, 2336
MspI	CCGG	1 cut(s)	1662
MspR9I	CCNGG	5 cut(s)	674, 1195, 1663, 2345, 2625
MunI	CAATTG	2 cut(s)	225, 2142
Mva1269I	GAATGC	1 cut(s)	1263
MvaI	CCWGG	4 cut(s)	674, 1195, 2345, 2625
MvnI	CGCG	1 cut(s)	2646
MwoI	GCNNNNNNNGC	5 cut(s)	913, 1628, 2153, 2261, 2555
NciI	CCSGG	1 cut(s)	1663
NcoI	CCATGG	2 cut(s)	1561, 1731
NlaIV	GGNNCC	8 cut(s)	679, 1030, 1443, 2349, 2439, 2532, 2772, 2799
NmuCI	GTSAC	9 cut(s)	382, 476, 638, 721, 970, 1228, 1576, 1828, 2300
NruI	TCGCGA	1 cut(s)	2646
NsiI	ATGCAT	1 cut(s)	2683
NspI	RCATGY	2 cut(s)	129, 2251
PaeI	GCATGC	1 cut(s)	129
PaeR7I	CTCGAG	3 cut(s)	732, 1701, 2160
PaqCI	CACCTGC	1 cut(s)	1048
PceI	AGGCCT	1 cut(s)	517
PcsI	WCGNNNNNNNCGW	1 cut(s)	717
PctI	GAATGC	1 cut(s)	1263
PfeI	GAWTC	7 cut(s)	137, 432, 505, 645, 991, 1608, 2657
PkrI	GCNGC	9 cut(s)	110, 131, 607, 1499, 1624, 1627, 1630, 2104, 2158
PleI	GAGTC	5 cut(s)	991, 1024, 1324, 1942, 2515
PpsI	GAGTC	5 cut(s)	991, 1024, 1324, 1942, 2515
PshAI	GACNNNNGTC	2 cut(s)	1179, 1583
Psp1406I	AACGTT	2 cut(s)	711, 1396
Psp6I	CCWGG	4 cut(s)	672, 1193, 2343, 2623
PspFI	CCCAGC	2 cut(s)	869, 2189
PspGI	CCWGG	4 cut(s)	672, 1193, 2343, 2623
PspN4I	GGNNCC	8 cut(s)	679, 1030, 1443, 2349, 2439, 2532, 2772, 2799
PspPI	GGNCC	6 cut(s)	272, 1028, 1301, 1442, 2035, 2797
PspXI	VCTCGAGB	3 cut(s)	732, 1701, 2160
PsrI	GAACNNNNNNTAC	2 cut(s)	518, 550
PstI	CTGCAG	2 cut(s)	88, 1174
PstNI	CAGNNNCTG	1 cut(s)	648
PsuI	RGATCY	7 cut(s)	1249, 1417, 1637, 2347, 2530, 2696, 2714
PvuII	CAGCTG	2 cut(s)	1655, 2336
RruI	TCGCGA	1 cut(s)	2646
RsaI	GTAC	6 cut(s)	623, 738, 839, 1817, 2357, 2710
RsaNI	GTAC	6 cut(s)	622, 737, 838, 1816, 2356, 2709
RseI	CAYNNNNRTG	4 cut(s)	746, 2211, 2593, 2735
SalI	GTCGAC	1 cut(s)	668
SatI	GCNGC	9 cut(s)	109, 130, 606, 1498, 1623, 1626, 1629, 2103, 2157
Sau96I	GGNCC	6 cut(s)	272, 1028, 1301, 1442, 2035, 2797
ScaI	AGTACT	2 cut(s)	2357, 2710
SchI	GAGTC	5 cut(s)	991, 1025, 1324, 1942, 2516
ScrFI	CCNGG	5 cut(s)	674, 1195, 1663, 2345, 2625
SduI	GDGCHC	4 cut(s)	490, 753, 1065, 2607
SfaNI	GCATC	5 cut(s)	357, 718, 1326, 1640, 2690
SfcI	CTRYAG	3 cut(s)	84, 1170, 1656
Sfr274I	CTCGAG	3 cut(s)	732, 1701, 2160
SinI	GGWCC	4 cut(s)	272, 1028, 1301, 2035
SlaI	CTCGAG	3 cut(s)	732, 1701, 2160
SmiMI	CAYNNNNRTG	4 cut(s)	746, 2211, 2593, 2735
SmlI	CTYRAG	5 cut(s)	732, 1701, 1811, 2160, 2292
SmoI	CTYRAG	5 cut(s)	732, 1701, 1811, 2160, 2292
SpeI	ACTAGT	2 cut(s)	584, 1645
SphI	GCATGC	1 cut(s)	129
SseBI	AGGCCT	1 cut(s)	517
SsiI	CCGC	3 cut(s)	422, 778, 2753
SspMI	CTAG	7 cut(s)	542, 585, 764, 1646, 1761, 1820, 2651
StuI	AGGCCT	1 cut(s)	517
StyD4I	CCNGG	5 cut(s)	672, 1193, 1661, 2343, 2623
StyI	CCWWGG	5 cut(s)	447, 1561, 1731, 1942, 2256
TaaI	ACNGT	8 cut(s)	370, 667, 862, 902, 1219, 1234, 1883, 2306
TaiI	ACGT	5 cut(s)	270, 714, 1098, 1399, 2464
TaqI	TCGA	7 cut(s)	669, 733, 1598, 1702, 1924, 2161, 2481
TatI	WGTACW	3 cut(s)	837, 2355, 2708
TfiI	GAWTC	7 cut(s)	137, 432, 505, 645, 991, 1608, 2657
TscAI	CASTG	6 cut(s)	865, 1237, 1419, 1888, 1920, 2311
TseFI	GTSAC	9 cut(s)	382, 476, 638, 721, 970, 1228, 1576, 1828, 2300
TseI	GCWGC	9 cut(s)	108, 129, 605, 1497, 1622, 1625, 1628, 2102, 2156
Tsp45I	GTSAC	9 cut(s)	382, 476, 638, 721, 970, 1228, 1576, 1828, 2300
TspRI	CASTG	6 cut(s)	865, 1237, 1419, 1888, 1920, 2311
VneI	GTGCAC	1 cut(s)	1061
VpaK11BI	GGWCC	4 cut(s)	272, 1028, 1301, 2035
XagI	CCTNNNNNAGG	1 cut(s)	2295
XbaI	TCTAGA	1 cut(s)	541
XceI	RCATGY	2 cut(s)	129, 2251
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1568, 2466
XhoI	CTCGAG	3 cut(s)	732, 1701, 2160
XmiI	GTMKAC	1 cut(s)	669
XspI	CTAG	7 cut(s)	542, 585, 764, 1646, 1761, 1820, 2651
ZrmI	AGTACT	2 cut(s)	2357, 2710
Zsp2I	ATGCAT	1 cut(s)	2683

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.