Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0013594

Physical Location & Seq

Genomic Coordinates Forward (+)

22388109 .. 22396896

Gene Structure 8788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g27100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2835 bp

ATGATGAAGGAATTTAATTATCGGGTTTTAAGACTAATCAAGTTTTCGATCATCTGCCTCTTCATTCTTGTGCCATCCACTTCTGCAGATGAAGATTTTTATGTGCTTTGTTATGCAGGCAGATTAGTGAGCATTGCGTGCTGCGGGGAATCGAATTACACGGATAGCAGAAACATTAGTTGGATATCGGACTATGATCAGTTTCCTAATACCACAAGCTGTTACACAAGAGCTCAGTCAGAGGCAGACTATTCCGGTTACAACAGAAGTAGAGTATTTTATCAGAATTCAGGCCAGAAAAGATGTTACAAGCTATCAACAGAGAAGGATGAAGACTATCTGATTAGGGCTACATTTCTATTTGGACACATTTGGGGCTCTAGTTTTTCGGTTTCAGTTGGTGTGACCCCGATTGCTATCGTAGATTCGTCGGAGGACTTGTCAGTGGTTGAAGGGATTTTTCGAGCCACTGAGGATGACACATATCTGTGTTTGGTGTATGACAAGGGAGCTCCTTATATTTCAGAGCTTGAGCTGAGGCTTCTGCAGGATTTGAAATACTATTTAGAGAACTTCCCTTCAAGTGTTCTGAAATTGGTTACAAGAAATAGTTTTGAAATTACAAAAGATGATATCAGGTATCCAAATGACACAAGTGACAGGATATGGAAGTCAAATTCAGGTGCCGACCCAGGAAGCGGAACATATCACATATCACAACCCAACGTCTCCATTTCCGGCAACGCCACCGCGTCTCCGCCTCTGCAAGTCCTGCAAACAGCTCTAGCGGCTCCAGACAGTTTGCGTTTTCTCCACAATGGCCTCCCCACAGAAAGTTACCTGTACCTCGTGTTCCTCTACTTCTACGAGGTCGATCGGGCGGTCCAAACCGGCCAAAGGGTGTTCGATATTTTCCTCAACGATGAGATGAAAGAAGGGAGATTTGACGTCTCGGGAAATGGGTCCAATTACAAGGAGCTTGCTTTCACTATCATGACAAATGGGTCCCTGAATTTGACTCTGGTTAAGGTCTCCGGGTCGGAAAATGGACCCATTTGCAATGCTTATGAGATCTTGCAGGTGCACCCATGGCGTCCAGAGACTACCAAAAGCGATGTGGAAGTGATTTTGGAGGTGAAGAATGAGTTGTTGAAGAATAACCAAGAGAGTGAAGTTTGGGAGGGTTGGGCTGGAGACCCGTGTCTACCAGTTCCATGGGATGGTATTACTTGTGAATCCATTGATGGGTACAGTATCATTACTGAACTGGATCTTTCGTCAGGCATTCAGAGGGGGTTTGATCATAAAAGCTTTCTTAAAGGGCCAGTTCCTTCAAGTATCACTAAGCTGAGCCACCTAAAAGTCCTGAACCTCAGCCACAATGACTTTACTGGCAACATTCCAGCATTTCTTCCTTCCTCCCTGCTGACCTCAGTGGATCTGAGCTTCAATGACCTTTGGGGGTCACTTCCATTATCTCTTATCTCACTGCCACATTTGGATATACTAAATATCAGGTGCAACCCTCATGTTGCAAAAGATATTCCCTCCGGTTTCAATGGCTCAAAACTTACCACTGGCCAAGAAAGTTGCAATGCTCAAGAAGCTTCTAAACAACGAATCATCATTGGTGCTGCTGCTGCATCTGGGTCTGTACTACTAACCATTGTAGTTGGGATAATTTTCTGCACTTGGAGACAAAACTTTCTACCCCAAGGAAATTTTGATATAAAAAGACATCATCATATGACAAAGAATTTAATTTTCTCGTTACCAAGCATGGACGATCTGGTTATGAAGTCAATATCCATAGAGACATTTACTCTTGAGTACATAGAGGCTGCTACCCAAAGGTACAAAACCTTGATAGGTGAAGGAGGTTTTGGGTCTGTTTACCGTGGCACTTTAATTGATGGTCAGGAAGTGGCCGTAAAGGTTCGGTCAGCAACATCAACCCAAGGAACTTGGGAATTTGAGAATGAGTTAAATCTTCTGTCAGCTATACGCCATGAGAACCTCGTGCCCCTTCTCGGTTATTGTTGTGAGAATGACCAAGAAATTCTGGTTTATCCATTTATGTCCAACGGCTCTTTACAGGATCGTCTCTATGGGGAAGCAGCAAAAAGAAAAATTCTGGACTGGCCAACCAGACTGTCAATTACTCTTGGTGCTGCTCGAGGTTTGACGCATCTTCACAATTTTGCTGGTCGTTGCATTATACATAGGGATGTGAAATCAAGTAATATACTTTTGGATGATAGCATGACTGCCAAGGTGGCAGACTTCGGTTTTTCAAAATACGCTCCTCAAGAAGGTGACAGTTGTGCTTCTCTGGAAGTAAGAGGGACAGCGGGATACTTGGATCCGGAGTACTACATGACCCATCATCTATCAGCAAAAAGTGATGTTTTTAGCTTTGGTGTCGTTCTGCTTGAAATCGTAAGCGGTCGGGAACCTCTGAACATACACAGGCCACGCCCCGAGTGGAGCTTGGTTGAATGGGCAAAATCCTATGTAAGGGAATCAAAGATTGATGAAATTGTTGACCCGAACATAAAAGGAGCGTACCATGCGGAGGCCATGTGGAGAGTAGTGGAGGTTGCATTGTCATGTATTGAGCCCTTTGCCGCTTCACGGCCAAACATGATTGAAGTCGTAAGGGAGCTAGAGGATGCTCTGATTATAGAGAACAATGCATCAGAGTACATGAGATCCATAGAGAGCTCGGGATCCAATCGCTTTTCTTCCATGGTGATGGAGAGAAGGATTCCGCCACCCACTCCTTCAGAACCTTCATCTATTTTGTCACAAATGGCTCCTCCAGAGCCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046777 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

945

Amino Acids

105.55

Weight (kDa)

5.15

Isoelectric Point (pI)

43.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013594)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g19010 FvH4_1g19010 FvH4_1g19010
malus_domestica	MD01G1044500.v1.1 MD15G1307000.v1.1
prunus_persica	Prupe.6G209400_v2.0.a1 Prupe.6G209400_v2.0.a1 Prupe.6G209400_v2.0.a1
pyrus_communis	pycom15g27100
rosa_chinensis	RchiOBHm_Chr2g0110021
rosa_laevigata	RLG00000017781
rosa_roxburghii	Rroxscaffold_2G00133770
rosa_rugosa	Rorug02G0165200
rosa_samantha	Rh2AG217000 Rh2BG226900 Rh2CG219100 Rh2DG222700
rosa_wichuraiana	Rw2G016760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1069
AasI	GACNNNNNNGTC	1 cut(s)	1003
AatII	GACGTC	1 cut(s)	951
Acc36I	ACCTGC	1 cut(s)	1069
AccB1I	GGYRCC	1 cut(s)	683
AccB7I	CCANNNNNTGG	1 cut(s)	1220
AccI	GTMKAC	1 cut(s)	1204
AccII	CGCG	1 cut(s)	752
AccIII	TCCGGA	1 cut(s)	2365
AclWI	GGATC	8 cut(s)	1278, 1446, 2106, 2357, 2370, 2706, 2724, 2737
AcoI	YGGCCR	5 cut(s)	892, 1579, 1926, 2141, 2636
AcsI	RAATTY	9 cut(s)	11, 286, 676, 1012, 1720, 1756, 1970, 2058, 2130
AcuI	CTGAAG	1 cut(s)	2769
AcyI	GRCGYC	2 cut(s)	948, 1093
AfaI	GTAC	8 cut(s)	845, 1250, 1656, 1832, 1856, 2372, 2567, 2705
AfiI	CCNNNNNNNGG	9 cut(s)	698, 897, 1220, 1245, 2030, 2312, 2517, 2575, 2634
AjnI	CCWGG	1 cut(s)	691
AjuI	GAANNNNNNNTTGG	4 cut(s)	163, 195, 1866, 1898
Alw21I	GWGCWC	4 cut(s)	235, 514, 1086, 2726
Alw26I	GTCTC	9 cut(s)	733, 759, 955, 1036, 1094, 1188, 1690, 1808, 2108
Alw44I	GTGCAC	1 cut(s)	1082
AlwI	GGATC	8 cut(s)	1278, 1446, 2106, 2357, 2370, 2706, 2724, 2737
Ama87I	CYCGRG	4 cut(s)	952, 2175, 2480, 2725
Aor13HI	TCCGGA	1 cut(s)	2365
ApaLI	GTGCAC	1 cut(s)	1082
ApeKI	GCWGC	7 cut(s)	141, 1634, 1637, 1640, 1841, 2117, 2171
ApoI	RAATTY	9 cut(s)	11, 286, 676, 1012, 1720, 1756, 1970, 2058, 2130
AspS9I	GGNCC	5 cut(s)	883, 963, 1005, 1049, 1322
AsuC2I	CCSGG	1 cut(s)	1036
AsuHPI	GGTGA	4 cut(s)	1147, 1883, 2327, 2764
AvaI	CYCGRG	4 cut(s)	952, 2175, 2480, 2725
AvaII	GGWCC	4 cut(s)	883, 963, 1005, 1049
BaeGI	GKGCMC	2 cut(s)	1086, 2025
BalI	TGGCCA	2 cut(s)	1581, 2143
BamHI	GGATCC	2 cut(s)	2362, 2729
BanI	GGYRCC	1 cut(s)	683
BanII	GRGCYC	5 cut(s)	235, 380, 514, 2622, 2726
BauI	CACGAG	2 cut(s)	848, 2018
BbsI	GAAGAC	1 cut(s)	339
Bbv12I	GWGCWC	4 cut(s)	235, 514, 1086, 2726
BbvCI	CCTCAGC	2 cut(s)	536, 1373
BbvI	GCAGC	7 cut(s)	128, 1621, 1624, 1627, 1828, 2129, 2158
BccI	CCATC	6 cut(s)	82, 1214, 1238, 1907, 2391, 2749
BceAI	ACGGC	3 cut(s)	1913, 2101, 2651
BciT130I	CCWGG	1 cut(s)	693
BciVI	GTATCC	2 cut(s)	651, 2348
BclI	TGATCA	2 cut(s)	196, 1300
BcnI	CCSGG	1 cut(s)	1036
BcoDI	GTCTC	9 cut(s)	733, 759, 955, 1036, 1094, 1188, 1690, 1808, 2108
BfaI	CTAG	3 cut(s)	381, 785, 2666
BfmI	CTRYAG	2 cut(s)	84, 545
BfuAI	ACCTGC	1 cut(s)	1069
BfuI	GTATCC	2 cut(s)	651, 2348
BglI	GCCNNNNNGGC	1 cut(s)	2276
BglII	AGATCT	1 cut(s)	1071
BisI	GCNGC	9 cut(s)	142, 789, 1635, 1638, 1641, 1842, 2118, 2172, 2628
BlpI	GCTNAGC	1 cut(s)	1349
BlsI	GCNGC	9 cut(s)	143, 790, 1636, 1639, 1642, 1843, 2119, 2173, 2629
BmcAI	AGTACT	1 cut(s)	2372
Bme1390I	CCNGG	2 cut(s)	693, 1036
Bme18I	GGWCC	4 cut(s)	883, 963, 1005, 1049
BmeT110I	CYCGRG	4 cut(s)	952, 2175, 2480, 2725
BmgT120I	GGNCC	5 cut(s)	883, 963, 1005, 1049, 1322
BmrFI	CCNGG	2 cut(s)	693, 1036
BmsI	GCATC	4 cut(s)	1652, 2197, 2662, 2705
BoxI	GACNNNNGTC	1 cut(s)	1200
BpiI	GAAGAC	1 cut(s)	339
BpmI	CTGGAG	3 cut(s)	777, 1212, 2805
Bpu10I	CCTNAGC	2 cut(s)	536, 1373
Bpu1102I	GCTNAGC	1 cut(s)	1349
BpuEI	CTTGAG	4 cut(s)	551, 1584, 1847, 2292
BpuMI	CCSGG	1 cut(s)	1036
BsaBI	GATNNNNATC	1 cut(s)	416
BsaHI	GRCGYC	2 cut(s)	948, 1093
BsaI	GGTCTC	2 cut(s)	1036, 1188
BsaJI	CCNNGG	8 cut(s)	691, 1088, 1214, 1714, 1897, 1957, 2271, 2748
BsaWI	WCCGGW	3 cut(s)	254, 1550, 2365
BsaXI	ACNNNNNCTCC	6 cut(s)	425, 455, 739, 769, 2567, 2597
Bsc4I	CCNNNNNNNGG	9 cut(s)	698, 897, 1220, 1245, 2030, 2312, 2517, 2575, 2634
Bse118I	RCCGGY	1 cut(s)	890
Bse1I	ACTGG	6 cut(s)	1208, 1272, 1325, 1396, 1582, 2144
Bse3DI	GCAATG	3 cut(s)	132, 1066, 1600
Bse8I	GATNNNNATC	1 cut(s)	416
BseAI	TCCGGA	1 cut(s)	2365
BseBI	CCWGG	1 cut(s)	693
BseDI	CCNNGG	8 cut(s)	691, 1088, 1214, 1714, 1897, 1957, 2271, 2748
BseGI	GGATG	7 cut(s)	74, 334, 481, 1225, 2233, 2260, 2677
BseJI	GATNNNNATC	1 cut(s)	416
BseLI	CCNNNNNNNGG	9 cut(s)	698, 897, 1220, 1245, 2030, 2312, 2517, 2575, 2634
BseMI	GCAATG	3 cut(s)	132, 1066, 1600
BseMII	CTCAG	7 cut(s)	248, 462, 527, 1340, 1387, 1433, 1446
BseNI	ACTGG	6 cut(s)	1208, 1272, 1325, 1396, 1582, 2144
BseRI	GAGGAG	2 cut(s)	2295, 2808
BseSI	GKGCMC	2 cut(s)	1086, 2025
BseXI	GCAGC	7 cut(s)	128, 1621, 1624, 1627, 1828, 2129, 2158
BsgI	GTGCAG	1 cut(s)	1672
Bsh1236I	CGCG	1 cut(s)	752
Bsh1285I	CGRYCG	2 cut(s)	877, 2449
BshNI	GGYRCC	1 cut(s)	683
BsiEI	CGRYCG	2 cut(s)	877, 2449
BsiHKAI	GWGCWC	4 cut(s)	235, 514, 1086, 2726
BsiHKCI	CYCGRG	4 cut(s)	952, 2175, 2480, 2725
BsiSI	CCGG	6 cut(s)	255, 738, 891, 1035, 1551, 2366
BslFI	GGGAC	2 cut(s)	991, 2359
BslI	CCNNNNNNNGG	9 cut(s)	698, 897, 1220, 1245, 2030, 2312, 2517, 2575, 2634
BsmAI	GTCTC	9 cut(s)	733, 759, 955, 1036, 1094, 1188, 1690, 1808, 2108
BsmBI	CGTCTC	4 cut(s)	733, 759, 955, 2108
BsmFI	GGGAC	2 cut(s)	991, 2359
BsmI	GAATGC	1 cut(s)	1284
Bso31I	GGTCTC	2 cut(s)	1036, 1188
BsoBI	CYCGRG	4 cut(s)	952, 2175, 2480, 2725
Bsp1286I	GDGCHC	7 cut(s)	235, 380, 514, 1086, 2025, 2622, 2726
Bsp13I	TCCGGA	1 cut(s)	2365
Bsp1720I	GCTNAGC	1 cut(s)	1349
Bsp19I	CCATGG	3 cut(s)	1088, 1214, 2748
BspCNI	CTCAG	7 cut(s)	247, 463, 528, 1341, 1386, 1434, 1445
BspEI	TCCGGA	1 cut(s)	2365
BspFNI	CGCG	1 cut(s)	752
BspHI	TCATGA	1 cut(s)	993
BspMAI	CTGCAG	2 cut(s)	88, 549
BspMI	ACCTGC	1 cut(s)	1069
BspPI	GGATC	8 cut(s)	1278, 1446, 2106, 2357, 2370, 2706, 2724, 2737
BspT107I	GGYRCC	1 cut(s)	683
BspTNI	GGTCTC	2 cut(s)	1036, 1188
BsrDI	GCAATG	3 cut(s)	132, 1066, 1600
BsrFI	RCCGGY	1 cut(s)	890
BsrI	ACTGG	6 cut(s)	1208, 1272, 1325, 1396, 1582, 2144
BssAI	RCCGGY	1 cut(s)	890
BssECI	CCNNGG	8 cut(s)	691, 1088, 1214, 1714, 1897, 1957, 2271, 2748
BssNI	GRCGYC	2 cut(s)	948, 1093
BssSI	CACGAG	2 cut(s)	848, 2018
BssT1I	CCWWGG	6 cut(s)	1088, 1214, 1714, 1957, 2271, 2748
Bst2BI	CACGAG	2 cut(s)	848, 2018
Bst2UI	CCWGG	1 cut(s)	693
Bst4CI	ACNGT	5 cut(s)	800, 1253, 1898, 2154, 2321
Bst6I	CTCTTC	1 cut(s)	65
BstACI	GRCGYC	2 cut(s)	948, 1093
BstAPI	GCANNNNNTGC	2 cut(s)	138, 772
BstC8I	GCNNGC	3 cut(s)	118, 139, 981
BstDEI	CTNAG	8 cut(s)	234, 471, 536, 1344, 1349, 1373, 1432, 1442
BstDSI	CCRYGG	4 cut(s)	1088, 1214, 1897, 2748
BstENI	CCTNNNNNAGG	2 cut(s)	2310, 2515
BstF5I	GGATG	7 cut(s)	74, 334, 481, 1225, 2233, 2260, 2677
BstFNI	CGCG	1 cut(s)	752
BstMAI	GTCTC	9 cut(s)	733, 759, 955, 1036, 1094, 1188, 1690, 1808, 2108
BstMCI	CGRYCG	2 cut(s)	877, 2449
BstMWI	GCNNNNNNNGC	8 cut(s)	138, 772, 788, 1090, 1604, 1640, 2276, 2570
BstNI	CCWGG	1 cut(s)	693
BstPAI	GACNNNNGTC	1 cut(s)	1200
BstSCI	CCNGG	2 cut(s)	691, 1034
BstSFI	CTRYAG	2 cut(s)	84, 545
BstSLI	GKGCMC	2 cut(s)	1086, 2025
BstUI	CGCG	1 cut(s)	752
BstV1I	GCAGC	7 cut(s)	128, 1621, 1624, 1627, 1828, 2129, 2158
BstV2I	GAAGAC	1 cut(s)	339
BstX2I	RGATCY	6 cut(s)	1071, 1270, 1438, 2362, 2711, 2729
BstXI	CCANNNNNNTGG	2 cut(s)	1215, 2755
BstYI	RGATCY	6 cut(s)	1071, 1270, 1438, 2362, 2711, 2729
BsuI	GTATCC	2 cut(s)	651, 2348
BtgI	CCRYGG	4 cut(s)	1088, 1214, 1897, 2748
BtgZI	GCGATG	1 cut(s)	1128
BtsCI	GGATG	7 cut(s)	74, 334, 481, 1225, 2233, 2260, 2677
BtsI	GCAGTG	1 cut(s)	1487
BtsIMutI	CAGTG	5 cut(s)	450, 468, 1440, 1487, 1575
BveI	ACCTGC	1 cut(s)	1069
Cac8I	GCNNGC	3 cut(s)	118, 139, 981
CciI	TCATGA	1 cut(s)	993
Cfr10I	RCCGGY	1 cut(s)	890
Cfr13I	GGNCC	5 cut(s)	883, 963, 1005, 1049, 1322
CseI	GACGC	3 cut(s)	741, 1082, 2194
Csp6I	GTAC	8 cut(s)	844, 1249, 1655, 1831, 1855, 2371, 2566, 2704
CviQI	GTAC	8 cut(s)	844, 1249, 1655, 1831, 1855, 2371, 2566, 2704
DdeI	CTNAG	8 cut(s)	234, 471, 536, 1344, 1349, 1373, 1432, 1442
DrdI	GACNNNNNNGTC	1 cut(s)	1003
DseDI	GACNNNNNNGTC	1 cut(s)	1003
EaeI	YGGCCR	5 cut(s)	892, 1579, 1926, 2141, 2636
Eam1104I	CTCTTC	1 cut(s)	65
EarI	CTCTTC	1 cut(s)	65
EciI	GGCGGA	2 cut(s)	747, 2760
Ecl136II	GAGCTC	3 cut(s)	233, 512, 2724
Eco130I	CCWWGG	6 cut(s)	1088, 1214, 1714, 1957, 2271, 2748
Eco24I	GRGCYC	5 cut(s)	235, 380, 514, 2622, 2726
Eco31I	GGTCTC	2 cut(s)	1036, 1188
Eco32I	GATATC	2 cut(s)	186, 634
Eco47I	GGWCC	4 cut(s)	883, 963, 1005, 1049
Eco53kI	GAGCTC	3 cut(s)	233, 512, 2724
Eco57I	CTGAAG	1 cut(s)	2769
Eco88I	CYCGRG	4 cut(s)	952, 2175, 2480, 2725
EcoICRI	GAGCTC	3 cut(s)	233, 512, 2724
EcoNI	CCTNNNNNAGG	2 cut(s)	2310, 2515
EcoO109I	RGGNCCY	1 cut(s)	1005
EcoRI	GAATTC	1 cut(s)	286
EcoRII	CCWGG	1 cut(s)	691
EcoRV	GATATC	2 cut(s)	186, 634
EcoT14I	CCWWGG	6 cut(s)	1088, 1214, 1714, 1957, 2271, 2748
EcoT22I	ATGCAT	1 cut(s)	2698
EcoT38I	GRGCYC	5 cut(s)	235, 380, 514, 2622, 2726
ErhI	CCWWGG	6 cut(s)	1088, 1214, 1714, 1957, 2271, 2748
Esp3I	CGTCTC	4 cut(s)	733, 759, 955, 2108
FaqI	GGGAC	2 cut(s)	991, 2359
FauI	CCCGC	2 cut(s)	137, 2344
FauNDI	CATATG	1 cut(s)	1746
FbaI	TGATCA	2 cut(s)	196, 1300
FblI	GTMKAC	1 cut(s)	1204
Fnu4HI	GCNGC	9 cut(s)	142, 789, 1635, 1638, 1641, 1842, 2118, 2172, 2628
FokI	GGATG	7 cut(s)	61, 341, 488, 1232, 2240, 2267, 2684
FriOI	GRGCYC	5 cut(s)	235, 380, 514, 2622, 2726
Fsp4HI	GCNGC	9 cut(s)	142, 789, 1635, 1638, 1641, 1842, 2118, 2172, 2628
FspBI	CTAG	3 cut(s)	381, 785, 2666
GluI	GCNGC	9 cut(s)	142, 789, 1635, 1638, 1641, 1842, 2118, 2172, 2628
GsuI	CTGGAG	3 cut(s)	777, 1212, 2805
HapII	CCGG	6 cut(s)	255, 738, 891, 1035, 1551, 2366
HgaI	GACGC	3 cut(s)	741, 1082, 2194
Hin1I	GRCGYC	2 cut(s)	948, 1093
HincII	GTYRAC	1 cut(s)	2545
HindII	GTYRAC	1 cut(s)	2545
HindIII	AAGCTT	2 cut(s)	1309, 1605
HinfI	GANTC	7 cut(s)	149, 425, 1018, 1235, 1620, 2522, 2767
HpaII	CCGG	6 cut(s)	255, 738, 891, 1035, 1551, 2366
HphI	GGTGA	4 cut(s)	1147, 1883, 2327, 2764
Hpy166II	GTNNAC	4 cut(s)	1084, 1205, 1894, 2545
Hpy8I	GTNNAC	4 cut(s)	1084, 1205, 1894, 2545
Hpy99I	CGWCG	1 cut(s)	433
HpyCH4III	ACNGT	5 cut(s)	800, 1253, 1898, 2154, 2321
HpyCH4IV	ACGT	2 cut(s)	726, 948
HpyF10VI	GCNNNNNNNGC	8 cut(s)	138, 772, 788, 1090, 1604, 1640, 2276, 2570
HpyF3I	CTNAG	8 cut(s)	234, 471, 536, 1344, 1349, 1373, 1432, 1442
HpySE526I	ACGT	2 cut(s)	726, 948
Hsp92I	GRCGYC	2 cut(s)	948, 1093
KflI	GGGWCCC	1 cut(s)	1005
Kpn2I	TCCGGA	1 cut(s)	2365
Ksp22I	TGATCA	2 cut(s)	196, 1300
LmnI	GCTCC	9 cut(s)	509, 517, 796, 976, 2308, 2487, 2561, 2662, 2821
Lsp1109I	GCAGC	7 cut(s)	128, 1621, 1624, 1627, 1828, 2129, 2158
LweI	GCATC	4 cut(s)	1652, 2197, 2662, 2705
MaeI	CTAG	3 cut(s)	381, 785, 2666
MaeII	ACGT	2 cut(s)	726, 948
MboII	GAAGA	9 cut(s)	52, 104, 344, 1150, 1165, 1403, 1982, 2183, 2736
MflI	RGATCY	6 cut(s)	1071, 1270, 1438, 2362, 2711, 2729
MhlI	GDGCHC	7 cut(s)	235, 380, 514, 1086, 2025, 2622, 2726
MlsI	TGGCCA	2 cut(s)	1581, 2143
MluNI	TGGCCA	2 cut(s)	1581, 2143
MlyI	GAGTC	1 cut(s)	1012
MmeI	TCCRAC	4 cut(s)	161, 411, 1020, 2106
Mox20I	TGGCCA	2 cut(s)	1581, 2143
Mph1103I	ATGCAT	1 cut(s)	2698
MroI	TCCGGA	1 cut(s)	2365
MscI	TGGCCA	2 cut(s)	1581, 2143
MseI	TTAA	7 cut(s)	15, 29, 1026, 1317, 1760, 1907, 1985
MslI	CAYNNNNRTG	6 cut(s)	68, 487, 992, 2226, 2608, 2753
Msp20I	TGGCCA	2 cut(s)	1581, 2143
MspA1I	CMGCKG	1 cut(s)	2351
MspI	CCGG	6 cut(s)	255, 738, 891, 1035, 1551, 2366
MspR9I	CCNGG	2 cut(s)	693, 1036
Mva1269I	GAATGC	1 cut(s)	1284
MvaI	CCWGG	1 cut(s)	693
MvnI	CGCG	1 cut(s)	752
MwoI	GCNNNNNNNGC	8 cut(s)	138, 772, 788, 1090, 1604, 1640, 2276, 2570
NciI	CCSGG	1 cut(s)	1036
NcoI	CCATGG	3 cut(s)	1088, 1214, 2748
NdeI	CATATG	1 cut(s)	1746
NmuCI	GTSAC	5 cut(s)	403, 656, 1464, 2315, 2805
NsiI	ATGCAT	1 cut(s)	2698
PaeR7I	CTCGAG	1 cut(s)	2175
PagI	TCATGA	1 cut(s)	993
PaqCI	CACCTGC	1 cut(s)	1069
PctI	GAATGC	1 cut(s)	1284
PfeI	GAWTC	6 cut(s)	149, 425, 1235, 1620, 2522, 2767
PflMI	CCANNNNNTGG	1 cut(s)	1220
PkrI	GCNGC	9 cut(s)	143, 790, 1636, 1639, 1642, 1843, 2119, 2173, 2629
Ple19I	CGATCG	1 cut(s)	877
PleI	GAGTC	1 cut(s)	1012
PpsI	GAGTC	1 cut(s)	1012
PpuMI	RGGWCCY	1 cut(s)	1005
PshAI	GACNNNNGTC	1 cut(s)	1200
Psp124BI	GAGCTC	3 cut(s)	235, 514, 2726
Psp5II	RGGWCCY	1 cut(s)	1005
Psp6I	CCWGG	1 cut(s)	691
PspGI	CCWGG	1 cut(s)	691
PspPI	GGNCC	5 cut(s)	883, 963, 1005, 1049, 1322
PspPPI	RGGWCCY	1 cut(s)	1005
PspXI	VCTCGAGB	1 cut(s)	2175
PsrI	GAACNNNNNNTAC	2 cut(s)	836, 868
PstI	CTGCAG	2 cut(s)	88, 549
PsuI	RGATCY	6 cut(s)	1071, 1270, 1438, 2362, 2711, 2729
PvuI	CGATCG	1 cut(s)	877
RsaI	GTAC	8 cut(s)	845, 1250, 1656, 1832, 1856, 2372, 2567, 2705
RsaNI	GTAC	8 cut(s)	844, 1249, 1655, 1831, 1855, 2371, 2566, 2704
RseI	CAYNNNNRTG	6 cut(s)	68, 487, 992, 2226, 2608, 2753
SacI	GAGCTC	3 cut(s)	235, 514, 2726
SaqAI	TTAA	7 cut(s)	15, 29, 1026, 1317, 1760, 1907, 1985
SatI	GCNGC	9 cut(s)	142, 789, 1635, 1638, 1641, 1842, 2118, 2172, 2628
Sau96I	GGNCC	5 cut(s)	883, 963, 1005, 1049, 1322
ScaI	AGTACT	1 cut(s)	2372
SchI	GAGTC	1 cut(s)	1012
ScrFI	CCNGG	2 cut(s)	693, 1036
SduI	GDGCHC	7 cut(s)	235, 380, 514, 1086, 2025, 2622, 2726
SfaNI	GCATC	4 cut(s)	1652, 2197, 2662, 2705
SfcI	CTRYAG	2 cut(s)	84, 545
Sfr274I	CTCGAG	1 cut(s)	2175
SinI	GGWCC	4 cut(s)	883, 963, 1005, 1049
SlaI	CTCGAG	1 cut(s)	2175
SmiMI	CAYNNNNRTG	6 cut(s)	68, 487, 992, 2226, 2608, 2753
SmlI	CTYRAG	5 cut(s)	530, 1599, 1826, 2175, 2307
SmoI	CTYRAG	5 cut(s)	530, 1599, 1826, 2175, 2307
SspMI	CTAG	3 cut(s)	381, 785, 2666
SstI	GAGCTC	3 cut(s)	235, 514, 2726
StyD4I	CCNGG	2 cut(s)	691, 1034
StyI	CCWWGG	6 cut(s)	1088, 1214, 1714, 1957, 2271, 2748
TaaI	ACNGT	5 cut(s)	800, 1253, 1898, 2154, 2321
TaiI	ACGT	2 cut(s)	729, 951
TaqI	TCGA	6 cut(s)	47, 152, 463, 873, 906, 2176
TaqII	GACCGA	1 cut(s)	1929
TatI	WGTACW	4 cut(s)	1654, 1830, 2370, 2703
TauI	GCSGC	2 cut(s)	791, 2630
TfiI	GAWTC	6 cut(s)	149, 425, 1235, 1620, 2522, 2767
Tru1I	TTAA	7 cut(s)	15, 29, 1026, 1317, 1760, 1907, 1985
Tru9I	TTAA	7 cut(s)	15, 29, 1026, 1317, 1760, 1907, 1985
TscAI	CASTG	5 cut(s)	450, 475, 1440, 1494, 1582
TseFI	GTSAC	5 cut(s)	403, 656, 1464, 2315, 2805
TseI	GCWGC	7 cut(s)	141, 1634, 1637, 1640, 1841, 2117, 2171
Tsp45I	GTSAC	5 cut(s)	403, 656, 1464, 2315, 2805
TspDTI	ATGAA	8 cut(s)	20, 52, 105, 345, 944, 1811, 2550, 2784
TspGWI	ACGGA	1 cut(s)	176
TspRI	CASTG	5 cut(s)	450, 475, 1440, 1494, 1582
Van91I	CCANNNNNTGG	1 cut(s)	1220
VneI	GTGCAC	1 cut(s)	1082
VpaK11BI	GGWCC	4 cut(s)	883, 963, 1005, 1049
XagI	CCTNNNNNAGG	2 cut(s)	2310, 2515
XapI	RAATTY	9 cut(s)	11, 286, 676, 1012, 1720, 1756, 1970, 2058, 2130
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1114, 2481
XhoI	CTCGAG	1 cut(s)	2175
XmiI	GTMKAC	1 cut(s)	1204
XspI	CTAG	3 cut(s)	381, 785, 2666
ZraI	GACGTC	1 cut(s)	949
ZrmI	AGTACT	1 cut(s)	2372
Zsp2I	ATGCAT	1 cut(s)	2698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.