Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0012067

Physical Location & Seq

Genomic Coordinates Forward (+)

15834582 .. 15845797

Gene Structure 11216 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g23980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3975 bp

ATGGGTAGAGAGGAAGCGAAGCTGAGCGAGGCGAAGGCGTCGTACCGGAGCGCAAAGGCGATCGGAAACCACGAGGAGGAGGCCCGGTGGGCCAACTTCATCGGCAACTTGCTCAAGGACCGCGGCGAGTACTTGCAGGCCCTCAATTGGTTCGATATCGATTACGATCTCTGCAACAAGTACTTGTCCCCGAAGCACTCCCTCGCCACCTGTCAGTCCCTCGGCGAGGTCTATCTTCGTCTCGAACGTTTCCAAGACGCCCTTGTTTATCAGAAGAAACATTTAATGCTTGCTGAGGAGGCCAATGACCTTGTTGAGCAGCAAAGGGCCAATACACAACTAGGTCGTACCTACCACGACATGTATCTAAAATCCGTGGAGGAACATCAGTCTGCGCGGAATGCCAAAAAGTACTTCAAGTCTGCTATGAAGCTTGCGCAGGCTATCAAAGACAACCCGCCTCCTAATAAGTCCTTTATCAAGGAATATATTGATGCGCATAACAATATAGGATTGGTTGAACTTGATCGTGATAACCTGGAAGAGGCTGAGAAAATCTTTACTAAAGCATTAGTTATTTGTGACCAAGAAGAGGTGAATGAATATGACGATGCACGCACCAGGCTCCATCACAATCTTGGAAAGGTTTACACCGAGCTGATGATGTGGGAAGATGCTCGGGAACACATTGAGAAGGACATTCTGATATGTAAACAAATTGGTCATTGTGAAGGAGAGGCAAAGGGGTATATCAATCTTGGCGAGTTGCATAACCGTGTCCAGAAGTATCAGGAGGCAATCCTTTGCTACCAAAAAGCACTTGATCTAGCAAAATCAATGGAAGATGAGGATGCCTTGGTCCGTCAAATTGAAGACAATATCAACACTGTAGAAGAGTTAGGTAAAGTAATGGATGACATCAAGAGTGAAGAGCAAAATCTCAAGAAGTTAACTAGAGATATGGCCATAGCAAGAGGCACAAGACAGAAAAGGAAATGTCAGCTCAAGCAAATTGGTTCTCTTGATGCTCTTATTAACAAATCAGAGACTATCTCTGCCTGGCCAAAGGTCCTTGAATTTGCAAAAAAGAAGAAGAAAGTAGCAACTGAAATTTGTGATAAAGAAAAGATTGCTGATTCACTTTGGTACATTGGATTATCCTACTTGAAGATAAGGAAGTTCCAGAAAGCCCTTAAATGGAGCACGAAGAGTTTGAAAATTTTCAAATCACTTGGAAACTTGGAGGGACAGGCGTTAGCACAAAGTAACATAGGTCTTGTTTTGGACAGTGAAGGTGATTATGAAGAAGCACTAAAAGCATTTACAGATAGCTACAGTCTTGCTCTTGAGGCTAAACTTCCTGATGTACAGCGTACTGCACTAGAAAATATGCACTATAGCAACTTGAACAGATTTGACAATGTTGAAGAGACCAGGAGATTACAAATTCTAATTGACAAATTGGGGCAGGAAAACAATGGAGGGCGTGAAAAAGAAAACATGGATTGCTGCCCTGAATCTAGTACAGAAGGGAGCGATGATTTCTCTGATAATATGCCTAATGCATGCTGTTCAGAAGAGATAAGAAACTCCCAGCCTAGCAGATCAGAATCTTTAAACCAAAAGGAAGAGCTGAATGATGACGTACCTTTGATTTCTCTCATCCGGTCCACCAAAGCTTCATCTAAGATGAAATCAGCTCATTTAGAAAACAATGAGCATAGAGTGGTGGGCCGTAAACGCATTCGTTTAGTCCTATCTGATGATGATGAAGAAGAAGAAATGTCTGATGCGGCAGAAAGCCCAAAAGTCAGGCCTACTAAAATCCCATTAAATGTTGTTACATCTAGTGAAGTTAAGACTAGAAGTAATACAGCTAGTCCTACTACTAAATTTCAGGATGTCATAGCCTTGACCTCAAATTTTGCCACAAGATCTTCTGATCCTCCTGTTAATACTGAAGAAAGCTCTAGTTCATGCAAATCCAGGACTCAAAATATGGCTACTCCAGACGGCAAATGTTTTAGAGCGTCAAGTTCTGGTGAAGGTCTTAATGCTAGTGGCTCTAGATGTGAGGTCACTGTCTCTGGAAATATATTGCAGAAAAATGACGCTGCACAGTTTATGTTGCTTACTTTGGATGATAAACATAATCAATGTATAACTTTTGAAATCGATGAAGACCTAATACAGGGCTCATTCATTGCTTCTGATAATCTAAGCATTGAGTCAGTGAAGGTTCAACTGGCGTGCTTATATTATTTGCAGCTTCCTATGGAGAGAAAACTCGAGGGGTTGCTTCCAATAATTCAGAATGTAAAATGTGGGGGAAAGGTTATTGAATACCTGGAAACAGTTGAAACATTTCAGGGGCACATGGGAAAAATTGTGGTTGAAGCTGTCATTGTTGGATGGGTCCAAAAGCGTTTGATAAAACTATACACCGAATACTGCTACAAGTTATCTGAGACACCCAACATGAAGTTGCTGAAGAAACTATATGATCTGGGGGTTTCAGACGATGAAATTACTGTTTCTGAATGTGAATTGCAAGATCTATCAATAACTCCGCTATTGGATGTCCTCCATGCTCGTAAAACATTTACAATGCTAGACCTTTCCCACAATATGTTAGGAAATGGTACTATGGAGAAACTCTCTCAAGTACTCACATCATCAGGCCAAAAACATGGTGGCTTAACGTTGGATCTACATTGCAACAGCTTTGGTCCAACTGCTTTGTTCCAGATTTGTGAATGCCCTCTGCTGTTTACTCGGTTGGAAGTGCTTAATATCTCAGGAAATCGTCTCACTGATGCATGTGCATCTTACCTTTCAACTATCTTGGAAAAGTGCAAGGCCCTTTGCAGTTTGAGTATAGAGCGATGCTCCATCACATCTAGAACTATTCAAAAGGTTGCTGATGCATTGGGTGCTGACTCTGTCCTTGAGCAACTTTGTATAGGATATAACAAGCCTATTTCTGGAAGTGCCATTACTAATTTACTCGTCAAGCTTGGCAGTCTGAAAAGATTTTCAAAATTAAATATGAGTGGCTTGAAGCTAAGCAAGCCTGTGGTTGATAGCCTTTGCCAGCTTGCTAAACACTTGTCCTTGTCAGTACTTATGCTTGGGGAAACTGGAATTGGACTTGACGGGGCATTATTAGTTACTGAGTCATTGTTCCATGAAATTGATGAGATTGTAAAACTTGACTTGTCATATTGCGGAGTGACACATGATTATGCTGTCAAACTAAGCACCAATTCTTCTACGATTTGTGGCATCCTTGAGCTTAGCCTTTCAGGGAATCCTATTATGCAAGAGGGTAGCAATGCCTTATCATCAATGCTTTTGAATTCTCAATGTTGTCTGAAAGTTTTGGCCCTTCAAAAGTGCCAGCTTGGGATCTCTGGCGTTCTACAAATTATTCAGGCATTATCAGGTAATGTTTGTCTTGAAGAGCTAAATCTTGCTGAAAATGCGGATGTTGGTAAAGAGCAGTCTTTCGATGAAAAAAAAGATAAAGAGTACTCTGCACCATATGACATGGCAGAAAAAGGGAATGTTGGACTCTCGCAGCCAAACCTCAATATGCCTAAATCTTCTCCATTGGTATATGCACCCAATGATGTTAGCCAGCTTGAAGTTGCTGATAGTGAAGATGATGAAGTTGGGGTTGAAGCTGCCGCATCTGCACGCGATGAGAGCTGCTCAAGCTCATATCGAAGAATTTCCTCGTCTACTGAGTGCCAGTTTCTTGAAGGGTTTTGCACTGCCATTGATATGGCAAAGAATCTGAGGTTCCTGGACCTAAGCAAAAACGGTTTCTCCAAACAAAGTGCAGAGATATTGTATTCGTCATGGTCAAGATCAAGATCTGAGTCAGCTCGGAGGCACATCAAGGACAAGACCATCCACTTCTTTGTGGAGGGAATGAAGTGTTGTGTGAAATCCTGCTGCAGGAAGGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000086 GO:0000278 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007049 GO:0008150 GO:0009653 GO:0009888 GO:0009933 GO:0009934 GO:0009987 GO:0016020 GO:0022402 GO:0022603 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044839 GO:0048507 GO:0048509 GO:0048532 GO:0048856 GO:0050789 GO:0050793 GO:0051301 GO:0065007 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_6 TPR_10 TPR_12 TPR_2 TPR_7 TPR_8

Protein Analysis

1325

Amino Acids

147.91

Weight (kDa)

5.5

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_12	PF13424	28 - 99	2e-06	Tetratricopeptide repeat
TPR_12	PF13424	165 - 231	1.5e-07	Tetratricopeptide repeat
TPR_12	PF13424	209 - 279	1.6e-09	Tetratricopeptide repeat
TPR_1	PF00515	247 - 277	4e-06	Tetratricopeptide repeat
TPR_12	PF13424	378 - 448	6.5e-09	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18730
fragaria_vesca	FvH4_1g23980 FvH4_1g23980 FvH4_1g23980
malus_domestica	MD00G1172700.v1.1 MD09G1255500.v1.1 MD17G1248600.v1.1
prunus_persica	Prupe.3G147500_v2.0.a1 Prupe.3G147500_v2.0.a1
pyrus_communis	pycom09g17130
rosa_chinensis	RchiOBHm_Chr2g0120111
rosa_laevigata	RLG00000018521
rosa_multiflora	Rmu_sc0010863.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123720
rosa_rugosa	Rorug02G0226800
rosa_samantha	Rh2AG283400 Rh2BG294700 Rh2DG308400
rosa_wichuraiana	Rw2G022700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	438, 498
AccI	GTMKAC	1 cut(s)	3743
AccII	CGCG	3 cut(s)	123, 397, 3702
AciI	CCGC	9 cut(s)	121, 123, 397, 458, 1793, 2570, 3228, 3485, 3690
AclI	AACGTT	2 cut(s)	247, 2702
AclWI	GGATC	3 cut(s)	1937, 2715, 3416
AcoI	YGGCCR	2 cut(s)	963, 1061
AcsI	RAATTY	8 cut(s)	1076, 1110, 1218, 1446, 1892, 1921, 3358, 3732
AcuI	CTGAAG	2 cut(s)	1980, 2510
AcyI	GRCGYC	2 cut(s)	38, 258
AfiI	CCNNNNNNNGG	9 cut(s)	76, 147, 226, 544, 592, 1197, 2191, 2984, 3963
AflIII	ACRYGT	1 cut(s)	360
AjnI	CCWGG	7 cut(s)	537, 620, 1058, 1433, 1985, 2346, 3807
AjuI	GAANNNNNNNTTGG	4 cut(s)	398, 430, 3129, 3161
Alw21I	GWGCWC	1 cut(s)	1205
Alw26I	GTCTC	6 cut(s)	245, 1040, 1424, 2089, 2462, 2813
AlwI	GGATC	3 cut(s)	1937, 2715, 3416
Ama87I	CYCGRG	2 cut(s)	678, 2288
ApeKI	GCWGC	8 cut(s)	319, 1509, 2114, 2266, 3580, 3686, 3711, 3960
ApoI	RAATTY	8 cut(s)	1076, 1110, 1218, 1446, 1892, 1921, 3358, 3732
Asp700I	GAANNNNTTC	3 cut(s)	1220, 2364, 3733
AspLEI	GCGC	4 cut(s)	53, 397, 439, 499
AsuC2I	CCSGG	1 cut(s)	85
AsuHPI	GGTGA	3 cut(s)	607, 1307, 2054
AvaI	CYCGRG	2 cut(s)	678, 2288
AvaII	GGWCC	7 cut(s)	118, 859, 1069, 1668, 2416, 2729, 3811
BaeGI	GKGCMC	1 cut(s)	2376
BalI	TGGCCA	2 cut(s)	965, 1063
BanII	GRGCYC	1 cut(s)	2198
BarI	GAAGNNNNNNTAC	6 cut(s)	26, 58, 2172, 2204, 2980, 3012
BauI	CACGAG	1 cut(s)	71
BbsI	GAAGAC	2 cut(s)	879, 2187
Bbv12I	GWGCWC	1 cut(s)	1205
BbvCI	CCTCAGC	1 cut(s)	294
BbvI	GCAGC	8 cut(s)	331, 1496, 2101, 2278, 3592, 3673, 3698, 3947
BccI	CCATC	4 cut(s)	636, 2406, 2900, 3923
BceAI	ACGGC	2 cut(s)	1719, 2029
BciT130I	CCWGG	7 cut(s)	539, 622, 1060, 1435, 1987, 2348, 3809
BcnI	CCSGG	1 cut(s)	85
BcoDI	GTCTC	6 cut(s)	245, 1040, 1424, 2089, 2462, 2813
BfmI	CTRYAG	4 cut(s)	888, 1333, 1396, 3961
BglI	GCCNNNNNGGC	1 cut(s)	89
BglII	AGATCT	3 cut(s)	1934, 2554, 3878
BlpI	GCTNAGC	3 cut(s)	23, 3065, 3296
BmcAI	AGTACT	6 cut(s)	131, 182, 413, 2667, 3123, 3533
Bme1390I	CCNGG	8 cut(s)	85, 539, 622, 1060, 1435, 1987, 2348, 3809
Bme18I	GGWCC	7 cut(s)	118, 859, 1069, 1668, 2416, 2729, 3811
BmeT110I	CYCGRG	2 cut(s)	678, 2288
BmiI	GGNNCC	3 cut(s)	626, 2417, 3806
BmrFI	CCNGG	8 cut(s)	85, 539, 622, 1060, 1435, 1987, 2348, 3809
BpiI	GAAGAC	2 cut(s)	879, 2187
BplI	GAGNNNNNCTC	8 cut(s)	1037, 1069, 2642, 2674, 2873, 2905, 3698, 3730
BpmI	CTGGAG	1 cut(s)	1992
Bpu10I	CCTNAGC	2 cut(s)	294, 3815
Bpu1102I	GCTNAGC	3 cut(s)	23, 3065, 3296
BpuEI	CTTGAG	8 cut(s)	98, 926, 989, 1367, 2646, 2969, 3311, 3700
BpuMI	CCSGG	1 cut(s)	85
Bsa29I	ATCGAT	2 cut(s)	159, 2175
BsaBI	GATNNNNATC	3 cut(s)	165, 1609, 3877
BsaHI	GRCGYC	2 cut(s)	38, 258
BsaI	GGTCTC	1 cut(s)	1424
BsaJI	CCNNGG	4 cut(s)	121, 220, 375, 855
BsaWI	WCCGGW	2 cut(s)	45, 1665
BsaXI	ACNNNNNCTCC	4 cut(s)	71, 101, 3815, 3845
Bsc4I	CCNNNNNNNGG	9 cut(s)	76, 147, 226, 544, 592, 1197, 2191, 2984, 3963
Bse1I	ACTGG	3 cut(s)	2250, 3145, 3754
Bse3DI	GCAATG	3 cut(s)	2202, 2713, 3340
Bse8I	GATNNNNATC	3 cut(s)	165, 1609, 3877
BseBI	CCWGG	7 cut(s)	539, 622, 1060, 1435, 1987, 2348, 3809
BseCI	ATCGAT	2 cut(s)	159, 2175
BseDI	CCNNGG	4 cut(s)	121, 220, 375, 855
BseJI	GATNNNNATC	3 cut(s)	165, 1609, 3877
BseLI	CCNNNNNNNGG	9 cut(s)	76, 147, 226, 544, 592, 1197, 2191, 2984, 3963
BseMI	GCAATG	3 cut(s)	2202, 2713, 3340
BseMII	CTCAG	9 cut(s)	14, 285, 540, 2457, 2811, 3165, 3738, 3791, 3873
BseNI	ACTGG	3 cut(s)	2250, 3145, 3754
BseRI	GAGGAG	3 cut(s)	89, 92, 311
BseSI	GKGCMC	1 cut(s)	2376
BseXI	GCAGC	8 cut(s)	331, 1496, 2101, 2278, 3592, 3673, 3698, 3947
BseYI	CCCAGC	1 cut(s)	1593
BsgI	GTGCAG	5 cut(s)	1362, 2100, 3522, 3681, 3864
Bsh1236I	CGCG	3 cut(s)	123, 397, 3702
Bsh1285I	CGRYCG	1 cut(s)	63
BshVI	ATCGAT	2 cut(s)	159, 2175
BsiEI	CGRYCG	1 cut(s)	63
BsiHKAI	GWGCWC	1 cut(s)	1205
BsiHKCI	CYCGRG	2 cut(s)	678, 2288
BsiSI	CCGG	3 cut(s)	46, 85, 1666
BslFI	GGGAC	3 cut(s)	172, 202, 1260
BslI	CCNNNNNNNGG	9 cut(s)	76, 147, 226, 544, 592, 1197, 2191, 2984, 3963
BsmAI	GTCTC	6 cut(s)	245, 1040, 1424, 2089, 2462, 2813
BsmBI	CGTCTC	2 cut(s)	245, 2813
BsmFI	GGGAC	3 cut(s)	172, 202, 1260
BsmI	GAATGC	3 cut(s)	406, 1743, 2762
Bso31I	GGTCTC	1 cut(s)	1424
BsoBI	CYCGRG	2 cut(s)	678, 2288
Bsp1286I	GDGCHC	3 cut(s)	1205, 2198, 2376
Bsp1407I	TGTACA	1 cut(s)	1366
Bsp1720I	GCTNAGC	3 cut(s)	23, 3065, 3296
BspACI	CCGC	9 cut(s)	121, 123, 397, 458, 1793, 2570, 3228, 3485, 3690
BspCNI	CTCAG	9 cut(s)	15, 286, 541, 2458, 2810, 3166, 3739, 3792, 3874
BspDI	ATCGAT	2 cut(s)	159, 2175
BspFNI	CGCG	3 cut(s)	123, 397, 3702
BspLI	GGNNCC	3 cut(s)	626, 2417, 3806
BspMAI	CTGCAG	1 cut(s)	3965
BspPI	GGATC	3 cut(s)	1937, 2715, 3416
BspQI	GCTCTTC	3 cut(s)	924, 1623, 3456
BspTNI	GGTCTC	1 cut(s)	1424
BsrDI	GCAATG	3 cut(s)	2202, 2713, 3340
BsrGI	TGTACA	1 cut(s)	1366
BsrI	ACTGG	3 cut(s)	2250, 3145, 3754
BssECI	CCNNGG	4 cut(s)	121, 220, 375, 855
BssNI	GRCGYC	2 cut(s)	38, 258
BssSI	CACGAG	1 cut(s)	71
BssT1I	CCWWGG	1 cut(s)	855
Bst2BI	CACGAG	1 cut(s)	71
Bst2UI	CCWGG	7 cut(s)	539, 622, 1060, 1435, 1987, 2348, 3809
Bst4CI	ACNGT	9 cut(s)	776, 889, 1289, 1337, 2083, 2121, 2356, 2533, 3827
Bst6I	CTCTTC	9 cut(s)	537, 585, 888, 924, 1202, 1422, 1572, 1623, 3456
BstACI	GRCGYC	2 cut(s)	38, 258
BstAPI	GCANNNNNTGC	1 cut(s)	2933
BstAUI	TGTACA	1 cut(s)	1366
BstDSI	CCRYGG	2 cut(s)	121, 375
BstENI	CCTNNNNNAGG	4 cut(s)	224, 542, 2189, 3961
BstFNI	CGCG	3 cut(s)	123, 397, 3702
BstHHI	GCGC	4 cut(s)	53, 397, 439, 499
BstMAI	GTCTC	6 cut(s)	245, 1040, 1424, 2089, 2462, 2813
BstMCI	CGRYCG	1 cut(s)	63
BstNI	CCWGG	7 cut(s)	539, 622, 1060, 1435, 1987, 2348, 3809
BstNSI	RCATGY	3 cut(s)	364, 1569, 2823
BstSCI	CCNGG	8 cut(s)	83, 537, 620, 1058, 1433, 1985, 2346, 3807
BstSFI	CTRYAG	4 cut(s)	888, 1333, 1396, 3961
BstSLI	GKGCMC	1 cut(s)	2376
BstUI	CGCG	3 cut(s)	123, 397, 3702
BstV1I	GCAGC	8 cut(s)	331, 1496, 2101, 2278, 3592, 3673, 3698, 3947
BstV2I	GAAGAC	2 cut(s)	879, 2187
BstX2I	RGATCY	5 cut(s)	1934, 2554, 2707, 3408, 3878
BstXI	CCANNNNNNTGG	2 cut(s)	2690, 3787
BstYI	RGATCY	5 cut(s)	1934, 2554, 2707, 3408, 3878
Bsu15I	ATCGAT	2 cut(s)	159, 2175
BsuTUI	ATCGAT	2 cut(s)	159, 2175
BtgI	CCRYGG	2 cut(s)	121, 375
BtgZI	GCGATG	3 cut(s)	1551, 2899, 3717
BtsI	GCAGTG	1 cut(s)	3774
BtsIMutI	CAGTG	6 cut(s)	885, 1294, 2079, 2238, 2811, 3774
CfoI	GCGC	4 cut(s)	53, 397, 439, 499
Cfr42I	CCGCGG	1 cut(s)	124
ClaI	ATCGAT	2 cut(s)	159, 2175
CseI	GACGC	4 cut(s)	27, 266, 2019, 2120
DraI	TTTAAA	1 cut(s)	1617
EaeI	YGGCCR	2 cut(s)	963, 1061
Eam1104I	CTCTTC	9 cut(s)	537, 585, 888, 924, 1202, 1422, 1572, 1623, 3456
EarI	CTCTTC	9 cut(s)	537, 585, 888, 924, 1202, 1422, 1572, 1623, 3456
Eco130I	CCWWGG	1 cut(s)	855
Eco147I	AGGCCT	1 cut(s)	1816
Eco24I	GRGCYC	1 cut(s)	2198
Eco31I	GGTCTC	1 cut(s)	1424
Eco32I	GATATC	1 cut(s)	157
Eco47I	GGWCC	7 cut(s)	118, 859, 1069, 1668, 2416, 2729, 3811
Eco57I	CTGAAG	2 cut(s)	1980, 2510
Eco88I	CYCGRG	2 cut(s)	678, 2288
EcoNI	CCTNNNNNAGG	4 cut(s)	224, 542, 2189, 3961
EcoO109I	RGGNCCY	3 cut(s)	139, 1069, 2860
EcoRI	GAATTC	1 cut(s)	3358
EcoRII	CCWGG	7 cut(s)	537, 620, 1058, 1433, 1985, 2346, 3807
EcoRV	GATATC	1 cut(s)	157
EcoT14I	CCWWGG	1 cut(s)	855
EcoT22I	ATGCAT	3 cut(s)	1567, 2821, 2929
EcoT38I	GRGCYC	1 cut(s)	2198
ErhI	CCWWGG	1 cut(s)	855
Esp3I	CGTCTC	2 cut(s)	245, 2813
FalI	AAGNNNNNCTT	2 cut(s)	246, 278
FaqI	GGGAC	3 cut(s)	172, 202, 1260
FauI	CCCGC	1 cut(s)	465
FauNDI	CATATG	1 cut(s)	3544
FblI	GTMKAC	1 cut(s)	3743
FriOI	GRGCYC	1 cut(s)	2198
FspAI	RTGCGCAY	1 cut(s)	498
FspI	TGCGCA	2 cut(s)	438, 498
GlaI	GCGC	4 cut(s)	52, 396, 438, 498
GsaI	CCCAGC	1 cut(s)	1597
GsuI	CTGGAG	1 cut(s)	1992
HapII	CCGG	3 cut(s)	46, 85, 1666
HgaI	GACGC	4 cut(s)	27, 266, 2019, 2120
HhaI	GCGC	4 cut(s)	53, 397, 439, 499
Hin1I	GRCGYC	2 cut(s)	38, 258
Hin6I	GCGC	4 cut(s)	51, 395, 437, 497
HinP1I	GCGC	4 cut(s)	51, 395, 437, 497
HincII	GTYRAC	1 cut(s)	951
HindII	GTYRAC	1 cut(s)	951
HindIII	AAGCTT	3 cut(s)	431, 1677, 3014
HpaI	GTTAAC	1 cut(s)	951
HpaII	CCGG	3 cut(s)	46, 85, 1666
HphI	GGTGA	3 cut(s)	607, 1307, 2054
Hpy166II	GTNNAC	7 cut(s)	649, 713, 951, 1671, 1739, 2772, 3744
Hpy8I	GTNNAC	7 cut(s)	649, 713, 951, 1671, 1739, 2772, 3744
Hpy99I	CGWCG	1 cut(s)	43
HpyCH4III	ACNGT	9 cut(s)	776, 889, 1289, 1337, 2083, 2121, 2356, 2533, 3827
HpyCH4IV	ACGT	3 cut(s)	247, 1644, 2702
HpySE526I	ACGT	3 cut(s)	247, 1644, 2702
Hsp92I	GRCGYC	2 cut(s)	38, 258
HspAI	GCGC	4 cut(s)	51, 395, 437, 497
KspAI	GTTAAC	1 cut(s)	951
KspI	CCGCGG	1 cut(s)	124
LguI	GCTCTTC	3 cut(s)	924, 1623, 3456
LmnI	GCTCC	5 cut(s)	48, 630, 1200, 1533, 2894
Lsp1109I	GCAGC	8 cut(s)	331, 1496, 2101, 2278, 3592, 3673, 3698, 3947
MaeII	ACGT	3 cut(s)	247, 1644, 2702
MaeIII	GTNAC	6 cut(s)	581, 1265, 1840, 2077, 3169, 3232
MfeI	CAATTG	1 cut(s)	145
MflI	RGATCY	5 cut(s)	1934, 2554, 2707, 3408, 3878
MhlI	GDGCHC	3 cut(s)	1205, 2198, 2376
MlsI	TGGCCA	2 cut(s)	965, 1063
MluNI	TGGCCA	2 cut(s)	965, 1063
MlyI	GAGTC	6 cut(s)	1984, 2237, 2933, 3185, 3567, 3893
MmeI	TCCRAC	5 cut(s)	2389, 2685, 2756, 2760, 3550
Mox20I	TGGCCA	2 cut(s)	965, 1063
Mph1103I	ATGCAT	3 cut(s)	1567, 2821, 2929
MroXI	GAANNNNTTC	3 cut(s)	1220, 2364, 3733
MscI	TGGCCA	2 cut(s)	965, 1063
MslI	CAYNNNNRTG	3 cut(s)	774, 3243, 3785
Msp20I	TGGCCA	2 cut(s)	965, 1063
MspA1I	CMGCKG	1 cut(s)	123
MspI	CCGG	3 cut(s)	46, 85, 1666
MspR9I	CCNGG	8 cut(s)	85, 539, 622, 1060, 1435, 1987, 2348, 3809
MunI	CAATTG	1 cut(s)	145
Mva1269I	GAATGC	3 cut(s)	406, 1743, 2762
MvaI	CCWGG	7 cut(s)	539, 622, 1060, 1435, 1987, 2348, 3809
MvnI	CGCG	3 cut(s)	123, 397, 3702
NciI	CCSGG	1 cut(s)	85
NdeI	CATATG	1 cut(s)	3544
NlaIV	GGNNCC	3 cut(s)	626, 2417, 3806
NmeAIII	GCCGAG	1 cut(s)	201
NmuCI	GTSAC	3 cut(s)	581, 2077, 3232
NsbI	TGCGCA	2 cut(s)	438, 498
NsiI	ATGCAT	3 cut(s)	1567, 2821, 2929
NspI	RCATGY	3 cut(s)	364, 1569, 2823
PaeI	GCATGC	1 cut(s)	1569
PaeR7I	CTCGAG	1 cut(s)	2288
PceI	AGGCCT	1 cut(s)	1816
PciI	ACATGT	1 cut(s)	360
PciSI	GCTCTTC	3 cut(s)	924, 1623, 3456
PcsI	WCGNNNNNNNCGW	2 cut(s)	69, 244
PctI	GAATGC	3 cut(s)	406, 1743, 2762
PdmI	GAANNNNTTC	3 cut(s)	1220, 2364, 3733
PfeI	GAWTC	5 cut(s)	1136, 1517, 1610, 3310, 3796
PflFI	GACNNNGTC	1 cut(s)	2942
PfoI	TCCNGGA	2 cut(s)	1985, 3807
Ple19I	CGATCG	1 cut(s)	63
PleI	GAGTC	6 cut(s)	1984, 2236, 2933, 3184, 3567, 3892
PpsI	GAGTC	6 cut(s)	1984, 2236, 2933, 3184, 3567, 3892
PpuMI	RGGWCCY	1 cut(s)	1069
PscI	ACATGT	1 cut(s)	360
Psp1406I	AACGTT	2 cut(s)	247, 2702
Psp5II	RGGWCCY	1 cut(s)	1069
Psp6I	CCWGG	7 cut(s)	537, 620, 1058, 1433, 1985, 2346, 3807
PspFI	CCCAGC	1 cut(s)	1593
PspGI	CCWGG	7 cut(s)	537, 620, 1058, 1433, 1985, 2346, 3807
PspN4I	GGNNCC	3 cut(s)	626, 2417, 3806
PspPPI	RGGWCCY	1 cut(s)	1069
PspXI	VCTCGAGB	1 cut(s)	2288
PstI	CTGCAG	1 cut(s)	3965
PsuI	RGATCY	5 cut(s)	1934, 2554, 2707, 3408, 3878
PsyI	GACNNNGTC	1 cut(s)	2942
PvuI	CGATCG	1 cut(s)	63
RseI	CAYNNNNRTG	3 cut(s)	774, 3243, 3785
SacII	CCGCGG	1 cut(s)	124
SapI	GCTCTTC	3 cut(s)	924, 1623, 3456
ScaI	AGTACT	6 cut(s)	131, 182, 413, 2667, 3123, 3533
SchI	GAGTC	6 cut(s)	1984, 2237, 2933, 3185, 3567, 3893
ScrFI	CCNGG	8 cut(s)	85, 539, 622, 1060, 1435, 1987, 2348, 3809
SduI	GDGCHC	3 cut(s)	1205, 2198, 2376
SfcI	CTRYAG	4 cut(s)	888, 1333, 1396, 3961
SfiI	GGCCNNNNNGGCC	1 cut(s)	89
Sfr274I	CTCGAG	1 cut(s)	2288
Sfr303I	CCGCGG	1 cut(s)	124
SgrBI	CCGCGG	1 cut(s)	124
SinI	GGWCC	7 cut(s)	118, 859, 1069, 1668, 2416, 2729, 3811
SlaI	CTCGAG	1 cut(s)	2288
SmiMI	CAYNNNNRTG	3 cut(s)	774, 3243, 3785
SmlI	CTYRAG	9 cut(s)	113, 941, 1004, 1346, 2288, 2661, 2948, 3290, 3715
SmoI	CTYRAG	9 cut(s)	113, 941, 1004, 1346, 2288, 2661, 2948, 3290, 3715
SphI	GCATGC	1 cut(s)	1569
SseBI	AGGCCT	1 cut(s)	1816
SsiI	CCGC	9 cut(s)	121, 123, 397, 458, 1793, 2570, 3228, 3485, 3690
StuI	AGGCCT	1 cut(s)	1816
StyD4I	CCNGG	8 cut(s)	83, 537, 620, 1058, 1433, 1985, 2346, 3807
StyI	CCWWGG	1 cut(s)	855
TaaI	ACNGT	9 cut(s)	776, 889, 1289, 1337, 2083, 2121, 2356, 2533, 3827
TaiI	ACGT	3 cut(s)	250, 1647, 2705
TaqI	TCGA	7 cut(s)	153, 159, 243, 2175, 2289, 3510, 3727
TatI	WGTACW	8 cut(s)	129, 180, 411, 1366, 1523, 2665, 3121, 3531
TauI	GCSGC	3 cut(s)	126, 1796, 3692
TfiI	GAWTC	5 cut(s)	1136, 1517, 1610, 3310, 3796
TscAI	CASTG	6 cut(s)	892, 1294, 2086, 2238, 2818, 3781
TseFI	GTSAC	3 cut(s)	581, 2077, 3232
TseI	GCWGC	8 cut(s)	319, 1509, 2114, 2266, 3580, 3686, 3711, 3960
Tsp45I	GTSAC	3 cut(s)	581, 2077, 3232
TspGWI	ACGGA	2 cut(s)	364, 851
TspRI	CASTG	6 cut(s)	892, 1294, 2086, 2238, 2818, 3781
Tth111I	GACNNNGTC	1 cut(s)	2942
VpaK11BI	GGWCC	7 cut(s)	118, 859, 1069, 1668, 2416, 2729, 3811
XagI	CCTNNNNNAGG	4 cut(s)	224, 542, 2189, 3961
XapI	RAATTY	8 cut(s)	1076, 1110, 1218, 1446, 1892, 1921, 3358, 3732
XbaI	TCTAGA	2 cut(s)	2066, 2900
XceI	RCATGY	3 cut(s)	364, 1569, 2823
XcmI	CCANNNNNNNNNTGG	2 cut(s)	635, 2690
XhoI	CTCGAG	1 cut(s)	2288
XmiI	GTMKAC	1 cut(s)	3743
XmnI	GAANNNNTTC	3 cut(s)	1220, 2364, 3733
ZrmI	AGTACT	6 cut(s)	131, 182, 413, 2667, 3123, 3533
Zsp2I	ATGCAT	3 cut(s)	1567, 2821, 2929

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.