Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0004006

Physical Location & Seq

Genomic Coordinates Forward (+)

16838689 .. 16846517

Gene Structure 7829 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g25040.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

ATGAGCGACTTCTCGGGCCTCCTGAGCTCCGATTACGGCTTCAAGCCCTCCGGCAAATCGGCCCCAATGTCGTCTTCTTCTTCTTCCTCTTCAAAGCCTCCGCCTTTCGATCTCGGATCCTCCAGATCAACTCGGACCTCCAATTCCTTCAACGGCTCCTTCTCCGACGATCGCGACCCGATCTTCGGACCCCCGAAAGCCCAAGACTTCGACAACATCTTCAGCGGCGGCTCCGCCAGGTTCTCCGCCAATTCGGAAGCTTTCAACTTGGATTCCATTTACGGCGGGCCCAGTGATTCCGGTTCGTCCAAGGTGCCCGATTCCGGCCCGGTTTTCGATAAGCCGGTGTATGACGACGACATTTTCGACGGCGTCGCGGGGCTGAAGAGCTCTGCTACCAACGACATTTTCTCGTCGGTGACGTCGCCGCCGCGGCGCGGGAGTAGTAGTGGGATTGATGACCTTCTCGGAGGGTTTGGGAAGGCTGAGCCGGCCTCGTCGAAAAGCTCTAGCTCGCAGAGAGCTGAGAAGGGTGCGCCGGGAGCTTTCGATGACTTGTTACCTGGGTTTGGAGGTAGAAGCAGCCCCCCAACTGAAAGGTCAAACTCAGAAGCCAACTGGCCCCCAGAGACAACTGCCAATGTGGGTAAAACAACAACTTCCAAGGTGATTGAAGATCCTTTTGGAGTAGCAGGACAGTTTAATGACCCATTGGAGGAAATAGTCCCTGCATTTTCTTCAGGGAGGAGTTTCAGGGGAAATGATAGTGGTAATTTAAGGGCAGATACAACCACAAATAATGGCAGAGGTTCAACTGGTAAGGAATCAACCAATTCTTCTTTGAGAAGTTCAGAAAACCAGTCTCAGAGGAAGGTTCCTGTTGGAAATCAATGGGATTCTCATCAGACCTTGTTTGACATGCCTTCAGTTTCAACTGATTCTCACAAATATGCTGATCAAACCATGTCTCCACCTTCGTATGTAAACGCCAAGGAAGCAAATGTACATGTGGATAGGTCTTCAAGATCTGAAGAAAACTTGGATTCATTCGATAATATATGGCTTACAGTATCAGAGATCCCTCTAATGACTCAGCCTACTAGTGCTCCACCACCTTCAAGACCACCTCCTCCAAGACCTGTGCAGGTTTCAAAGTCAAGAATGAGTTCTCCTTCTTCTACGAATTCAAGAAAGAAGGCTAGTGAATCCTCTACTGATTTCTTTCAGGCTCACAAATCAGACCCTGCTGCAGCTAGGAGCTCTGGTGTTTCTTCCGTTGACAATCTTGACGATTTTGCCACGGGAAAGAGTCATAGTAACTTTGATGAACATGCAAATGGTCTTTCAGGTGAAGAATTAGAGCGCAACTCAGTTACTGATGCCGTTAAGGACGCTATGGATAGAGCTGAGTTTAAATTGAGGCAGGCAAAGTCTGCCAGAAGTAAAGAAGCACAGGAGAAGGAAAAAGAACGGCTGCAGAGGGGGAGCGAAGAGGAAGATATGGAACAGAGGAGACAGGAGAAAGAGAGGGAGACTGAGAGGGTTTGGGAAGACAAAGAAAGAGAGCAAAGGAAACTTGAGAAGGAAAGGGAGAGAGCCAGGGAGATGGAGGAGAAGAACAGACAAGCTGTGGAAAGGGCTACTAGGGAAGCACGCGAGAGAGCAGCAGCTGAAGCTCGCATAAGGGCTGAAAGGGCTAAAGCAGAGAGAGCTGCTGTTGACAGGGCAAATGCTGAAGCTAGAGCACGTGCTGAAAGGGCTGCGGTTCAGAGAGCTCAATCTGAAGCTCGAGAAAGGGCTGCAGCAGAAGCAAAACTAAGAGCAGAAAAGGCTGCTGCAGATGCCAGAGAAAGAGCAAATGCAGAAGCTAGAGAAAGAGCAACTGCAGAATCTAAGGAGAGGGAAGCAAGGGAGAGAGCTGCAGCAAGGTCAGAAGCTGAAGCGCGAACAAGATCGGAGCGTGTTGCGGTGGAAAGGGCTGCTGCAGAGGCTCGAGAAAGGGCTAATGCTGCTGCGAGGGCGAACCAACAAAGGAATGAAAATGATCTTGAAAACTTTTTCAACATGGGTCGGGCTAGCAGTGCTCCACGACCCAGGAATAACTCAACAGATCCTTTTGATGCCCATTTTCAGAACAGGCAAGAGCCTGAAGTGCCGAAGACATCAACATCCTCAAACATAAAGAAAGCATCTTCAGCCACCAATATTGTTGACGATCTCTCATCAATTTTTGGAGCTGCTCCATCATCTAATGAGTTCCAAGAAGTTGAAGGAGAAAGTGAAGAAAGGCGAAGAGCCAGGTTGGAACGCCATCAAAGGACCAAGGAGCGTACGGTGAAAGCACTTGCGGAAAAGAACGAGCGAGACCTTCAAGTCCAAAGAGAACAAGCTGAGAGACATAGAATTGCTGAAACACTAGATGTTGAGATTAAGCGCTGGGCTGCAGGAAAAGAAGGGAATTTGCGTGCTCTGCTATCAACTATGCAATATGTACTGTGGCCTGAATGTGGTTGGCAGCCAGTTTCCTTGACTGATATGATTAATGCTGCCCAAGTGAAGAAAGTATATAGGAAGGCAACCTTGTGTATTCATCCTGATAAGGTACAGCAGAAAGGTGCCAATCTTCAACAGAAGTATGTAGCCGAGAAGGTGTTCGACCTTCTTAAGGAAGCTTGGAACAAGTTCAATTCAGAGGAGCTATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0009504 GO:0016020 GO:0016192 GO:0031982 GO:0043226 GO:0043227 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0071944 GO:0072583 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

902

Amino Acids

99.4

Weight (kDa)

6.26

Isoelectric Point (pI)

54.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12770 AT4G12770 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G36520
fragaria_vesca	FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040
malus_domestica	MD00G1181300.v1.1 MD15G1135900.v1.1
prunus_persica	Prupe.4G277600_v2.0.a1 Prupe.4G277600_v2.0.a1
pyrus_communis	pycom15g12250 pycom520g00360
rosa_chinensis	RchiOBHm_Chr2g0122701
rosa_laevigata	RLG00000018706
rosa_multiflora	Rmu_sc0008259.1_g000015 Rmu_sc0017734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00121300
rosa_rugosa	Rorug02G0241600 Rorug02G0241700
rosa_samantha	Rh2AG299900 Rh2BG308000 Rh2CG286200 Rh2CG286700 Rh2DG324000
rosa_wichuraiana	Rw2G023840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2372
AatII	GACGTC	1 cut(s)	425
Acc36I	ACCTGC	1 cut(s)	1135
AccB1I	GGYRCC	2 cut(s)	313, 2615
AccII	CGCG	6 cut(s)	174, 377, 433, 438, 1656, 1945
AclWI	GGATC	5 cut(s)	111, 124, 671, 1072, 2105
AcsI	RAATTY	2 cut(s)	1183, 2458
AcvI	CACGTG	1 cut(s)	1748
AcyI	GRCGYC	2 cut(s)	372, 422
AfaI	GTAC	4 cut(s)	1005, 2332, 2493, 2604
AfeI	AGCGCT	1 cut(s)	2435
AfiI	CCNNNNNNNGG	7 cut(s)	185, 323, 437, 569, 715, 2507, 2665
AflII	CTTAAG	1 cut(s)	2663
AflIII	ACRYGT	1 cut(s)	1006
AhlI	ACTAGT	1 cut(s)	1100
AjnI	CCWGG	5 cut(s)	236, 562, 1598, 2093, 2297
AjuI	GAANNNNNNNTTGG	6 cut(s)	58, 90, 392, 424, 666, 698
Alw21I	GWGCWC	8 cut(s)	29, 392, 1108, 1262, 1747, 1777, 2086, 2470
Alw26I	GTCTC	7 cut(s)	623, 867, 972, 1507, 1526, 2358, 2389
AlwI	GGATC	5 cut(s)	111, 124, 671, 1072, 2105
AlwNI	CAGNNNCTG	4 cut(s)	1244, 1376, 1670, 1937
Ama87I	CYCGRG	3 cut(s)	13, 1788, 1992
Aor51HI	AGCGCT	1 cut(s)	2435
AoxI	GGCC	7 cut(s)	16, 60, 287, 325, 492, 620, 2498
ApaI	GGGCCC	1 cut(s)	291
ApoI	RAATTY	2 cut(s)	1183, 2458
ArsI	GACNNNNNNTTYG	4 cut(s)	167, 199, 347, 379
AseI	ATTAAT	1 cut(s)	2541
Asp700I	GAANNNNTTC	3 cut(s)	1165, 2651, 2681
AspLEI	GCGC	5 cut(s)	438, 538, 1365, 1945, 2436
AspS9I	GGNCC	9 cut(s)	16, 61, 135, 188, 287, 288, 326, 621, 2319
AsuC2I	CCSGG	2 cut(s)	329, 540
AsuHPI	GGTGA	4 cut(s)	430, 679, 1361, 2347
AsuNHI	GCTAGC	1 cut(s)	2075
AvaI	CYCGRG	3 cut(s)	13, 1788, 1992
AvaII	GGWCC	3 cut(s)	135, 188, 2319
BaeGI	GKGCMC	2 cut(s)	291, 318
BamHI	GGATCC	1 cut(s)	116
BanI	GGYRCC	2 cut(s)	313, 2615
BanII	GRGCYC	5 cut(s)	29, 291, 392, 1262, 1777
BarI	GAAGNNNNNNTAC	2 cut(s)	987, 1019
BbrPI	CACGTG	1 cut(s)	1748
BbsI	GAAGAC	4 cut(s)	66, 1011, 1557, 2165
Bbv12I	GWGCWC	8 cut(s)	29, 392, 1108, 1262, 1747, 1777, 2086, 2470
BccI	CCATC	3 cut(s)	1600, 2251, 2319
BceAI	ACGGC	6 cut(s)	52, 169, 298, 385, 1367, 1487
BciT130I	CCWGG	5 cut(s)	238, 564, 1600, 2095, 2299
BclI	TGATCA	1 cut(s)	955
BcnI	CCSGG	2 cut(s)	329, 540
BcoDI	GTCTC	7 cut(s)	623, 867, 972, 1507, 1526, 2358, 2389
BcuI	ACTAGT	1 cut(s)	1100
BfaI	CTAG	9 cut(s)	510, 1101, 1200, 1254, 1644, 1740, 1869, 2076, 2417
BfmI	CTRYAG	8 cut(s)	1248, 1475, 1800, 1836, 1884, 1920, 1983, 2442
BfoI	RGCGCY	1 cut(s)	2437
BfrI	CTTAAG	1 cut(s)	2663
BfuAI	ACCTGC	1 cut(s)	1135
BglI	GCCNNNNNGGC	1 cut(s)	433
BglII	AGATCT	1 cut(s)	1025
BlpI	GCTNAGC	1 cut(s)	486
Bme1390I	CCNGG	7 cut(s)	238, 329, 540, 564, 1600, 2095, 2299
Bme18I	GGWCC	3 cut(s)	135, 188, 2319
BmeT110I	CYCGRG	3 cut(s)	13, 1788, 1992
BmgT120I	GGNCC	9 cut(s)	16, 61, 135, 188, 287, 288, 326, 621, 2319
BmrFI	CCNGG	7 cut(s)	238, 329, 540, 564, 1600, 2095, 2299
BmrI	ACTGGG	1 cut(s)	285
BmsI	GCATC	4 cut(s)	1369, 1831, 2110, 2198
BmtI	GCTAGC	1 cut(s)	2079
BmuI	ACTGGG	1 cut(s)	285
BpiI	GAAGAC	4 cut(s)	66, 1011, 1557, 2165
BplI	GAGNNNNNCTC	4 cut(s)	479, 511, 1352, 1384
BpmI	CTGGAG	1 cut(s)	106
Bpu10I	CCTNAGC	1 cut(s)	23
Bpu1102I	GCTNAGC	1 cut(s)	486
BpuEI	CTTGAG	1 cut(s)	1598
BpuMI	CCSGG	2 cut(s)	329, 540
BsaAI	YACGTR	1 cut(s)	1748
BsaBI	GATNNNNATC	1 cut(s)	900
BsaHI	GRCGYC	2 cut(s)	372, 422
BsaI	GGTCTC	1 cut(s)	2358
BsaJI	CCNNGG	9 cut(s)	309, 431, 563, 663, 990, 1299, 1599, 2093, 2322
BsaWI	WCCGGW	1 cut(s)	299
BsaXI	ACNNNNNCTCC	8 cut(s)	433, 463, 952, 982, 1090, 1120, 1249, 1279
Bsc4I	CCNNNNNNNGG	7 cut(s)	185, 323, 437, 569, 715, 2507, 2665
Bse118I	RCCGGY	2 cut(s)	343, 490
Bse1I	ACTGG	5 cut(s)	291, 623, 820, 859, 2519
Bse8I	GATNNNNATC	1 cut(s)	900
BseBI	CCWGG	5 cut(s)	238, 564, 1600, 2095, 2299
BseDI	CCNNGG	9 cut(s)	309, 431, 563, 663, 990, 1299, 1599, 2093, 2322
BseGI	GGATG	2 cut(s)	2168, 2590
BseJI	GATNNNNATC	1 cut(s)	900
BseLI	CCNNNNNNNGG	7 cut(s)	185, 323, 437, 569, 715, 2507, 2665
BseNI	ACTGG	5 cut(s)	291, 623, 820, 859, 2519
BseRI	GAGGAG	4 cut(s)	760, 1119, 1525, 1625
BseSI	GKGCMC	2 cut(s)	291, 318
BseYI	CCCAGC	1 cut(s)	2436
BsgI	GTGCAG	1 cut(s)	1163
Bsh1236I	CGCG	6 cut(s)	174, 377, 433, 438, 1656, 1945
Bsh1285I	CGRYCG	1 cut(s)	172
BshFI	GGCC	7 cut(s)	18, 62, 289, 327, 494, 622, 2500
BshNI	GGYRCC	2 cut(s)	313, 2615
BsiEI	CGRYCG	1 cut(s)	172
BsiHKAI	GWGCWC	8 cut(s)	29, 392, 1108, 1262, 1747, 1777, 2086, 2470
BsiHKCI	CYCGRG	3 cut(s)	13, 1788, 1992
BsiSI	CCGG	7 cut(s)	51, 300, 324, 329, 344, 491, 539
BsiWI	CGTACG	1 cut(s)	2330
BslFI	GGGAC	1 cut(s)	710
BslI	CCNNNNNNNGG	7 cut(s)	185, 323, 437, 569, 715, 2507, 2665
BsmAI	GTCTC	7 cut(s)	623, 867, 972, 1507, 1526, 2358, 2389
BsmFI	GGGAC	1 cut(s)	710
BsnI	GGCC	7 cut(s)	18, 62, 289, 327, 494, 622, 2500
Bso31I	GGTCTC	1 cut(s)	2358
BsoBI	CYCGRG	3 cut(s)	13, 1788, 1992
Bsp120I	GGGCCC	1 cut(s)	287
Bsp1407I	TGTACA	1 cut(s)	1003
Bsp1720I	GCTNAGC	1 cut(s)	486
Bsp68I	TCGCGA	1 cut(s)	174
BspANI	GGCC	7 cut(s)	18, 62, 289, 327, 494, 622, 2500
BspFNI	CGCG	6 cut(s)	174, 377, 433, 438, 1656, 1945
BspMAI	CTGCAG	8 cut(s)	1252, 1479, 1804, 1840, 1888, 1924, 1987, 2446
BspMI	ACCTGC	1 cut(s)	1135
BspOI	GCTAGC	1 cut(s)	2079
BspPI	GGATC	5 cut(s)	111, 124, 671, 1072, 2105
BspQI	GCTCTTC	2 cut(s)	380, 2287
BspT107I	GGYRCC	2 cut(s)	313, 2615
BspTI	CTTAAG	1 cut(s)	2663
BspTNI	GGTCTC	1 cut(s)	2358
BsrFI	RCCGGY	2 cut(s)	343, 490
BsrGI	TGTACA	1 cut(s)	1003
BsrI	ACTGG	5 cut(s)	291, 623, 820, 859, 2519
BssAI	RCCGGY	2 cut(s)	343, 490
BssECI	CCNNGG	9 cut(s)	309, 431, 563, 663, 990, 1299, 1599, 2093, 2322
BssNI	GRCGYC	2 cut(s)	372, 422
BssT1I	CCWWGG	4 cut(s)	309, 663, 990, 2322
Bst2UI	CCWGG	5 cut(s)	238, 564, 1600, 2095, 2299
Bst4CI	ACNGT	4 cut(s)	699, 1069, 2335, 2496
Bst6I	CTCTTC	4 cut(s)	94, 380, 1485, 2287
BstACI	GRCGYC	2 cut(s)	372, 422
BstAFI	CTTAAG	1 cut(s)	2663
BstAPI	GCANNNNNTGC	1 cut(s)	1433
BstAUI	TGTACA	1 cut(s)	1003
BstBAI	YACGTR	1 cut(s)	1748
BstC8I	GCNNGC	8 cut(s)	287, 492, 515, 1425, 1654, 1678, 2077, 2466
BstDSI	CCRYGG	2 cut(s)	431, 1299
BstENI	CCTNNNNNAGG	1 cut(s)	2663
BstF5I	GGATG	2 cut(s)	2168, 2590
BstFNI	CGCG	6 cut(s)	174, 377, 433, 438, 1656, 1945
BstH2I	RGCGCY	1 cut(s)	2437
BstHHI	GCGC	5 cut(s)	438, 538, 1365, 1945, 2436
BstMAI	GTCTC	7 cut(s)	623, 867, 972, 1507, 1526, 2358, 2389
BstMCI	CGRYCG	1 cut(s)	172
BstNI	CCWGG	5 cut(s)	238, 564, 1600, 2095, 2299
BstNSI	RCATGY	3 cut(s)	922, 1010, 1334
BstSCI	CCNGG	7 cut(s)	236, 327, 538, 562, 1598, 2093, 2297
BstSFI	CTRYAG	8 cut(s)	1248, 1475, 1800, 1836, 1884, 1920, 1983, 2442
BstSLI	GKGCMC	2 cut(s)	291, 318
BstUI	CGCG	6 cut(s)	174, 377, 433, 438, 1656, 1945
BstV2I	GAAGAC	4 cut(s)	66, 1011, 1557, 2165
BstX2I	RGATCY	5 cut(s)	116, 676, 1025, 1077, 2110
BstXI	CCANNNNNNTGG	1 cut(s)	1606
BstYI	RGATCY	5 cut(s)	116, 676, 1025, 1077, 2110
BsuRI	GGCC	7 cut(s)	18, 62, 289, 327, 494, 622, 2500
BtgI	CCRYGG	2 cut(s)	431, 1299
BtsCI	GGATG	2 cut(s)	2168, 2590
BtsI	GCAGTG	1 cut(s)	2086
BtsIMutI	CAGTG	2 cut(s)	298, 2086
BtuMI	TCGCGA	1 cut(s)	174
BveI	ACCTGC	1 cut(s)	1135
Cac8I	GCNNGC	8 cut(s)	287, 492, 515, 1425, 1654, 1678, 2077, 2466
CaiI	CAGNNNCTG	4 cut(s)	1244, 1376, 1670, 1937
CfoI	GCGC	5 cut(s)	438, 538, 1365, 1945, 2436
Cfr10I	RCCGGY	2 cut(s)	343, 490
Cfr13I	GGNCC	9 cut(s)	16, 61, 135, 188, 287, 288, 326, 621, 2319
Cfr42I	CCGCGG	1 cut(s)	434
CseI	GACGC	2 cut(s)	361, 1400
Csp6I	GTAC	4 cut(s)	1004, 2331, 2492, 2603
CspCI	CAANNNNNGTGG	2 cut(s)	2188, 2223
CviAII	CATG	5 cut(s)	919, 964, 1007, 1331, 2065
CviQI	GTAC	4 cut(s)	1004, 2331, 2492, 2603
DraI	TTTAAA	1 cut(s)	1414
DrdI	GACNNNNNNGTC	1 cut(s)	2372
DseDI	GACNNNNNNGTC	1 cut(s)	2372
Eam1104I	CTCTTC	4 cut(s)	94, 380, 1485, 2287
EarI	CTCTTC	4 cut(s)	94, 380, 1485, 2287
EciI	GGCGGA	3 cut(s)	90, 223, 235
Ecl136II	GAGCTC	4 cut(s)	27, 390, 1260, 1775
Eco130I	CCWWGG	4 cut(s)	309, 663, 990, 2322
Eco24I	GRGCYC	5 cut(s)	29, 291, 392, 1262, 1777
Eco31I	GGTCTC	1 cut(s)	2358
Eco47I	GGWCC	3 cut(s)	135, 188, 2319
Eco47III	AGCGCT	1 cut(s)	2435
Eco53kI	GAGCTC	4 cut(s)	27, 390, 1260, 1775
Eco72I	CACGTG	1 cut(s)	1748
Eco88I	CYCGRG	3 cut(s)	13, 1788, 1992
EcoICRI	GAGCTC	4 cut(s)	27, 390, 1260, 1775
EcoNI	CCTNNNNNAGG	1 cut(s)	2663
EcoRI	GAATTC	1 cut(s)	1183
EcoRII	CCWGG	5 cut(s)	236, 562, 1598, 2093, 2297
EcoT14I	CCWWGG	4 cut(s)	309, 663, 990, 2322
EcoT38I	GRGCYC	5 cut(s)	29, 291, 392, 1262, 1777
ErhI	CCWWGG	4 cut(s)	309, 663, 990, 2322
FaeI	CATG	5 cut(s)	922, 967, 1010, 1334, 2068
FalI	AAGNNNNNCTT	2 cut(s)	2564, 2596
FaqI	GGGAC	1 cut(s)	710
FatI	CATG	5 cut(s)	918, 963, 1006, 1330, 2064
FauI	CCCGC	3 cut(s)	278, 370, 431
FbaI	TGATCA	1 cut(s)	955
FokI	GGATG	2 cut(s)	2155, 2577
FriOI	GRGCYC	5 cut(s)	29, 291, 392, 1262, 1777
FspBI	CTAG	9 cut(s)	510, 1101, 1200, 1254, 1644, 1740, 1869, 2076, 2417
GlaI	GCGC	5 cut(s)	437, 537, 1364, 1944, 2435
GsaI	CCCAGC	1 cut(s)	2440
GsuI	CTGGAG	1 cut(s)	106
HaeII	RGCGCY	1 cut(s)	2437
HaeIII	GGCC	7 cut(s)	18, 62, 289, 327, 494, 622, 2500
HapII	CCGG	7 cut(s)	51, 300, 324, 329, 344, 491, 539
HgaI	GACGC	2 cut(s)	361, 1400
HhaI	GCGC	5 cut(s)	438, 538, 1365, 1945, 2436
Hin1I	GRCGYC	2 cut(s)	372, 422
Hin1II	CATG	5 cut(s)	922, 967, 1010, 1334, 2068
Hin6I	GCGC	5 cut(s)	436, 536, 1363, 1943, 2434
HinP1I	GCGC	5 cut(s)	436, 536, 1363, 1943, 2434
HincII	GTYRAC	3 cut(s)	1279, 1720, 2212
HindII	GTYRAC	3 cut(s)	1279, 1720, 2212
HindIII	AAGCTT	2 cut(s)	258, 2670
HpaII	CCGG	7 cut(s)	51, 300, 324, 329, 344, 491, 539
HphI	GGTGA	4 cut(s)	430, 679, 1361, 2347
Hpy166II	GTNNAC	4 cut(s)	985, 1279, 1720, 2212
Hpy8I	GTNNAC	4 cut(s)	985, 1279, 1720, 2212
Hpy99I	CGWCG	7 cut(s)	170, 359, 371, 377, 418, 427, 502
HpyCH4III	ACNGT	4 cut(s)	699, 1069, 2335, 2496
HpyCH4IV	ACGT	2 cut(s)	422, 1747
HpySE526I	ACGT	2 cut(s)	422, 1747
Hsp92I	GRCGYC	2 cut(s)	372, 422
Hsp92II	CATG	5 cut(s)	922, 967, 1010, 1334, 2068
HspAI	GCGC	5 cut(s)	436, 536, 1363, 1943, 2434
KroI	GCCGGC	1 cut(s)	490
KroNI	GCCGGC	1 cut(s)	492
Ksp22I	TGATCA	1 cut(s)	955
KspI	CCGCGG	1 cut(s)	434
LguI	GCTCTTC	2 cut(s)	380, 2287
LweI	GCATC	4 cut(s)	1369, 1831, 2110, 2198
MaeI	CTAG	9 cut(s)	510, 1101, 1200, 1254, 1644, 1740, 1869, 2076, 2417
MaeII	ACGT	2 cut(s)	422, 1747
MaeIII	GTNAC	4 cut(s)	418, 558, 1316, 1372
MflI	RGATCY	5 cut(s)	116, 676, 1025, 1077, 2110
MlyI	GAGTC	2 cut(s)	1084, 1318
MmeI	TCCRAC	3 cut(s)	189, 862, 2283
MroNI	GCCGGC	1 cut(s)	490
MroXI	GAANNNNTTC	3 cut(s)	1165, 2651, 2681
MseI	TTAA	7 cut(s)	702, 776, 1386, 1413, 2430, 2541, 2664
MslI	CAYNNNNRTG	2 cut(s)	948, 1335
MspA1I	CMGCKG	3 cut(s)	225, 433, 1670
MspCI	CTTAAG	1 cut(s)	2663
MspI	CCGG	7 cut(s)	51, 300, 324, 329, 344, 491, 539
MspR9I	CCNGG	7 cut(s)	238, 329, 540, 564, 1600, 2095, 2299
MvaI	CCWGG	5 cut(s)	238, 564, 1600, 2095, 2299
MvnI	CGCG	6 cut(s)	174, 377, 433, 438, 1656, 1945
NaeI	GCCGGC	1 cut(s)	492
NciI	CCSGG	2 cut(s)	329, 540
NgoMIV	GCCGGC	1 cut(s)	490
NheI	GCTAGC	1 cut(s)	2075
NlaIII	CATG	5 cut(s)	922, 967, 1010, 1334, 2068
NmeAIII	GCCGAG	1 cut(s)	2668
NmuCI	GTSAC	1 cut(s)	418
NruI	TCGCGA	1 cut(s)	174
NspI	RCATGY	3 cut(s)	922, 1010, 1334
PaeR7I	CTCGAG	2 cut(s)	1788, 1992
PciI	ACATGT	1 cut(s)	1006
PciSI	GCTCTTC	2 cut(s)	380, 2287
PcsI	WCGNNNNNNNCGW	2 cut(s)	363, 419
PdiI	GCCGGC	1 cut(s)	492
PdmI	GAANNNNTTC	3 cut(s)	1165, 2651, 2681
PfeI	GAWTC	9 cut(s)	272, 296, 320, 824, 896, 938, 1043, 1205, 1889
Pfl23II	CGTACG	1 cut(s)	2330
PflFI	GACNNNGTC	1 cut(s)	371
Ple19I	CGATCG	1 cut(s)	172
PleI	GAGTC	2 cut(s)	1084, 1317
PmaCI	CACGTG	1 cut(s)	1748
PmlI	CACGTG	1 cut(s)	1748
PpsI	GAGTC	2 cut(s)	1084, 1317
Ppu21I	YACGTR	1 cut(s)	1748
PscI	ACATGT	1 cut(s)	1006
PshBI	ATTAAT	1 cut(s)	2541
Psp124BI	GAGCTC	4 cut(s)	29, 392, 1262, 1777
Psp6I	CCWGG	5 cut(s)	236, 562, 1598, 2093, 2297
PspCI	CACGTG	1 cut(s)	1748
PspFI	CCCAGC	1 cut(s)	2436
PspGI	CCWGG	5 cut(s)	236, 562, 1598, 2093, 2297
PspLI	CGTACG	1 cut(s)	2330
PspOMI	GGGCCC	1 cut(s)	287
PspPI	GGNCC	9 cut(s)	16, 61, 135, 188, 287, 288, 326, 621, 2319
PstI	CTGCAG	8 cut(s)	1252, 1479, 1804, 1840, 1888, 1924, 1987, 2446
PstNI	CAGNNNCTG	4 cut(s)	1244, 1376, 1670, 1937
PsuI	RGATCY	5 cut(s)	116, 676, 1025, 1077, 2110
PsyI	GACNNNGTC	1 cut(s)	371
PvuI	CGATCG	1 cut(s)	172
PvuII	CAGCTG	1 cut(s)	1670
RruI	TCGCGA	1 cut(s)	174
RsaI	GTAC	4 cut(s)	1005, 2332, 2493, 2604
RsaNI	GTAC	4 cut(s)	1004, 2331, 2492, 2603
RseI	CAYNNNNRTG	2 cut(s)	948, 1335
SacI	GAGCTC	4 cut(s)	29, 392, 1262, 1777
SacII	CCGCGG	1 cut(s)	434
SapI	GCTCTTC	2 cut(s)	380, 2287
SaqAI	TTAA	7 cut(s)	702, 776, 1386, 1413, 2430, 2541, 2664
Sau96I	GGNCC	9 cut(s)	16, 61, 135, 188, 287, 288, 326, 621, 2319
SchI	GAGTC	2 cut(s)	1084, 1318
ScrFI	CCNGG	7 cut(s)	238, 329, 540, 564, 1600, 2095, 2299
SfaNI	GCATC	4 cut(s)	1369, 1831, 2110, 2198
SfcI	CTRYAG	8 cut(s)	1248, 1475, 1800, 1836, 1884, 1920, 1983, 2442
Sfr274I	CTCGAG	2 cut(s)	1788, 1992
Sfr303I	CCGCGG	1 cut(s)	434
SgrBI	CCGCGG	1 cut(s)	434
SinI	GGWCC	3 cut(s)	135, 188, 2319
SlaI	CTCGAG	2 cut(s)	1788, 1992
SmiMI	CAYNNNNRTG	2 cut(s)	948, 1335
SmlI	CTYRAG	4 cut(s)	1577, 1788, 1992, 2663
SmoI	CTYRAG	4 cut(s)	1577, 1788, 1992, 2663
SpeI	ACTAGT	1 cut(s)	1100
SspI	AATATT	1 cut(s)	2206
SspMI	CTAG	9 cut(s)	510, 1101, 1200, 1254, 1644, 1740, 1869, 2076, 2417
SstI	GAGCTC	4 cut(s)	29, 392, 1262, 1777
StyD4I	CCNGG	7 cut(s)	236, 327, 538, 562, 1598, 2093, 2297
StyI	CCWWGG	4 cut(s)	309, 663, 990, 2322
TaaI	ACNGT	4 cut(s)	699, 1069, 2335, 2496
TaiI	ACGT	2 cut(s)	425, 1750
TatI	WGTACW	2 cut(s)	1003, 2491
TauI	GCSGC	5 cut(s)	228, 231, 430, 433, 436
TfiI	GAWTC	9 cut(s)	272, 296, 320, 824, 896, 938, 1043, 1205, 1889
Tru1I	TTAA	7 cut(s)	702, 776, 1386, 1413, 2430, 2541, 2664
Tru9I	TTAA	7 cut(s)	702, 776, 1386, 1413, 2430, 2541, 2664
TscAI	CASTG	2 cut(s)	298, 2086
TseFI	GTSAC	1 cut(s)	418
Tsp45I	GTSAC	1 cut(s)	418
TspDTI	ATGAA	4 cut(s)	1035, 1341, 2052, 2579
TspGWI	ACGGA	1 cut(s)	1264
TspRI	CASTG	2 cut(s)	298, 2086
Tth111I	GACNNNGTC	1 cut(s)	371
Vha464I	CTTAAG	1 cut(s)	2663
VpaK11BI	GGWCC	3 cut(s)	135, 188, 2319
VspI	ATTAAT	1 cut(s)	2541
XagI	CCTNNNNNAGG	1 cut(s)	2663
XapI	RAATTY	2 cut(s)	1183, 2458
XceI	RCATGY	3 cut(s)	922, 1010, 1334
XhoI	CTCGAG	2 cut(s)	1788, 1992
XmnI	GAANNNNTTC	3 cut(s)	1165, 2651, 2681
XspI	CTAG	9 cut(s)	510, 1101, 1200, 1254, 1644, 1740, 1869, 2076, 2417
ZraI	GACGTC	1 cut(s)	423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.