Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0004006

Physical Location & Seq

Genomic Coordinates Forward (+)

34948109 .. 34955467

Gene Structure 7359 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G023840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

ATGAACGACTTCTCGGGTCTCTTAAACTCCGATTACGGCTTCAAGCCCTCCGGCAAGTCGGCCCCAATGTCTTCTTCTTCCTCCTCCTCTTCTTCTTCAAAGCCCCCAGCTTTCGATCTCGGATCCACCGGACCCTCCTCCAGATCAACTCGCACCTCCAATTCCTTCTCCGGCGATCGCGACCCGATCTTCGGAGCCCCGAAAGCCCCAGACTTTGAGAACATCTTCGGCGGCTCGGCCAGGTTCTCCTCCAATTCCGAAGCTTTCAACTTGGATTCCATCTACGGCGCTGATTCCGCCTCCTCCAAGGTCGCCGATTCCGGCCCCGTTTTCGACAGGCCGGTTTACGACGACGACATTTTCGACGGCGTTGCGGGGCTGAAGAGCTCAGCCGCGAACGACATTTTCTCCTCGACGGTGACGTCGCCGCGGCCGCCGCCGCGGGGGAGTGATAGTAGTGCGTTTGATGACCTTCTCGGTGGGTTTGGCAAGGCTGAGCCGGCGGCGTCCTCGTCGAAAAGCTCTAGCTCACAGAAAGCTGACGCGGGTGTGCCGCCGGGTTTCGATGAATTGTTACCTGGATTTGGAGCTAGTAGCAGCCCCCAAACTGAAAGGTCAAACTCAGAAGCCAACTGGCCCCCAGAGACAACTGCCAATGTGAGTAAAACAACAACTTCCAAGGTGATTGGCGATCCTTTTGGAGTAGCAGGGCAGTTTAATGACCCCTTGGAGGAAATAAGTAGACTTTCTAATTCTGGAAGCTTGAAGGCTGATAACCCGTCTGTTGATAACGGGCGAGCATTTGATGATATAGATCCCTTTGATGGCCTTGGGAAGTCGGTCCCTGCATTTTCTTCAGGGAAGAGTTTCAGGGGAAAGGACAGTGGTAATTTAAAGGCAGATACAAGCACAAATAATGGCAGAGGTTCAACTGGTAAAGAATCAACTAAGTCTTCTGTGAGAAGTCCAGATAACCAGTCTCAGAGGAAGGTTCCTGTTGGAAATCATTGGGATCCTCATCAGACCTTTTTTGACATGCCTTCAGTTTCGACTGATTCTCACAAATCTGCAGGTCAAACTATGTCTCCACCTTCGTATGTAAATGCCAAGGAAGCAAATGTACCGGTGGATAGGTCTTCAAGATTTGAAGAAAACTTGGATTCATCAGATAATGTATGGCTTACGGTATCAGAGATCCCTCTAGTGACTCAGCCTACTAGTGCTCCACCACCTTCAAGACCACCTCCTCCAAGACCTGTGCAGGTTTCAAAGCCAAGAATGAGTTCTCCTTCTTCTACAAATTCAAGAAAGAAGGCTAGTGAATCCTCTACTGAGTTCTTTCAGGCTCCAAAATCAGCCTCCGCTGCAGCTAGGAGCTCTGGTGTTTCTTCAGTTGATGAACTTGGCGATTTTGGCATGGGAAAGAGCCAAAGTAACTTTGATGAACATGCAAATGGTCTTTCGGGTGAAGAATCGGAGCGGAACTCAGTTACTGATGCTGTGAAGGAGGCTATGGAAAAAGCTGAGTTTAAAATGAGGCAGGCAAAAGAGAGAGGAAGTACAAAGTCTGCGAGAAGTAAAGAAGCACAGGAGAAGGAAAAAGAACGGCTGCAGAGGGAGAGCGAAGAGGAAGATATCGAACAGAGGAGACTGGAGAAAGAGAGGGAAACTGAGAGGGTGTGGGAAGACAAAGAAAGAGAGCAAAGGAAACTTGAGAAGGAAAGGGAGAGAGCCAGGGAGATGGAGGAGAAGAACAGACAAGCTGTGGAAAGAGCTACTAGGGAAGCACGTGAGAGAGCGGCAGCTGAAGCTCGCAGTAAGGCTGAAAGGGCTAAAACAGAGAGAGCCGCTGTTGACAGGGCAAATGCTGAAGCTAGAGCACGTGCTGAAAGGGCTGCAGTTCAGAGAGCTCAATCTGAAGCTCGGGAAAGGGCTGCAGCAGAAGCAAAGTTAAGAGCAGAAAAGGCTGCTGCAGAAGCCAGAGAAAGAGCTAATGCAGAAGCCAGAGAAAGAGCTAATGCAGAAGCTAAGGAGAGGGAAGCAAGGGAGAGAACTGCTGCAGCAAGGTCTGAAGCTGAAGCACGAACAAGATCGGAGCGTGCTGCAGTGGAAAGGGCTGCTGCAGAGGCCCGAGAAAGGGCTAATGCTGCTGCGAGGGCGAGCCAACAAAGGAATGAAAATGATCTTGAGAACTTTTTCAACATGGGTCGGGCTAGCAGTGCGCCACGACCCAGGGCTAACTCATCGGATCCTTTTGATGCCCATTTTCAGAACAGGCAACAGCCTGAAGTGCCGAAGACATCAACTTCCTCAAACATAAAGAAAGCGTCTTCAACCACAAATATTGTTGATGATCTTTCATCAATTTTTGGAGCTGCTCCATCATCTAATGAGTTCCAAGAAGTTGAAGGAGAAACTGAAGAAAGGCGAAGAGCCAGGTTGGAACGACACCAAAGGACCAAGGAGCGTACGGTGAAAGCACTTGCTGAAAAGAACGAGCGAGACCTTCAAGCCCAAAGAGAACAAGCTGAGAGACATAGAATTGCTGAAACACTAGATGTTGAGATTAAGCGCTGGGCTGCAGGAAAAGAAGGAAATTTACGTGCTCTGCTATCAACTTTGCAATATGTACTGTGGCCTGAATGTGGTTGGCAGCCAGTTTCCTTGACTGATATGATTAATGCTGCCCAAGTGAAGAAAGTATATAGAAAGGCAACTTTGTGTATTCATCCTGATAAGGTACAACAGAAAGGTGCCAATCTTCAACAGAAGTATGTAGCTGAGAAGGTGTTCGACCTCCTTAAGGAAGCTTGGAACAAGTTCAATTCAGAGGAGCTATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0009504 GO:0016020 GO:0016192 GO:0031982 GO:0043226 GO:0043227 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0071944 GO:0072583 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

947

Amino Acids

103.57

Weight (kDa)

6.44

Isoelectric Point (pI)

52.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12770 AT4G12770 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G36520
fragaria_vesca	FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040
malus_domestica	MD00G1181300.v1.1 MD15G1135900.v1.1
prunus_persica	Prupe.4G277600_v2.0.a1 Prupe.4G277600_v2.0.a1
pyrus_communis	pycom15g12250 pycom520g00360
rosa_chinensis	RchiOBHm_Chr2g0122701
rosa_laevigata	RLG00000018706
rosa_multiflora	Rmu_sc0008259.1_g000015 Rmu_sc0017734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00121300
rosa_rugosa	Rorug02G0241600 Rorug02G0241700
rosa_samantha	Rh2AG299900 Rh2BG308000 Rh2CG286200 Rh2CG286700 Rh2DG324000
rosa_wichuraiana	Rw2G023840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	421
AatII	GACGTC	1 cut(s)	425
Acc36I	ACCTGC	2 cut(s)	1061, 1252
AccB1I	GGYRCC	1 cut(s)	2753
AccBSI	CCGCTC	2 cut(s)	1480, 1799
AccI	GTMKAC	1 cut(s)	742
AccII	CGCG	5 cut(s)	180, 395, 430, 442, 545
AclWI	GGATC	9 cut(s)	117, 130, 686, 809, 1007, 1020, 1189, 2243, 2256
AcoI	YGGCCR	2 cut(s)	237, 431
AcsI	RAATTY	2 cut(s)	1300, 2596
AcvI	CACGTG	2 cut(s)	1790, 1883
AcyI	GRCGYC	2 cut(s)	422, 506
AfaI	GTAC	5 cut(s)	1122, 1561, 2470, 2631, 2742
AfeI	AGCGCT	1 cut(s)	2573
AfiI	CCNNNNNNNGG	9 cut(s)	191, 443, 584, 730, 824, 2136, 2137, 2645, 2803
AflII	CTTAAG	1 cut(s)	2801
AgeI	ACCGGT	1 cut(s)	1123
AhlI	ACTAGT	1 cut(s)	1217
AjnI	CCWGG	5 cut(s)	239, 577, 1733, 2231, 2435
AjuI	GAANNNNNNNTTGG	4 cut(s)	58, 90, 1267, 1299
Alw21I	GWGCWC	6 cut(s)	389, 1225, 1379, 1882, 1912, 2608
Alw26I	GTCTC	7 cut(s)	23, 638, 984, 1089, 1642, 2496, 2527
AlwI	GGATC	9 cut(s)	117, 130, 686, 809, 1007, 1020, 1189, 2243, 2256
AlwNI	CAGNNNCTG	1 cut(s)	1493
Ama87I	CYCGRG	3 cut(s)	13, 1923, 2130
Aor51HI	AGCGCT	1 cut(s)	2573
AoxI	GGCC	9 cut(s)	60, 237, 322, 338, 431, 635, 826, 2127, 2636
ApoI	RAATTY	2 cut(s)	1300, 2596
ArsI	GACNNNNNNTTYG	4 cut(s)	173, 205, 344, 376
AseI	ATTAAT	1 cut(s)	2679
AsiGI	ACCGGT	1 cut(s)	1123
AsiSI	GCGATCGC	1 cut(s)	178
Asp700I	GAANNNNTTC	7 cut(s)	8, 224, 866, 1282, 2195, 2789, 2819
AspLEI	GCGC	3 cut(s)	290, 2224, 2574
AspS9I	GGNCC	7 cut(s)	61, 131, 323, 636, 841, 2128, 2457
AsuC2I	CCSGG	1 cut(s)	558
AsuHPI	GGTGA	4 cut(s)	430, 694, 1478, 2485
AsuNHI	GCTAGC	1 cut(s)	2213
AvaI	CYCGRG	3 cut(s)	13, 1923, 2130
AvaII	GGWCC	3 cut(s)	131, 841, 2457
BamHI	GGATCC	3 cut(s)	122, 1012, 2248
BanI	GGYRCC	1 cut(s)	2753
BanII	GRGCYC	4 cut(s)	199, 389, 1379, 1912
BarI	GAAGNNNNNNTAC	4 cut(s)	1104, 1136, 2583, 2615
BbrPI	CACGTG	2 cut(s)	1790, 1883
BbsI	GAAGAC	6 cut(s)	63, 945, 1128, 1692, 2303, 2322
Bbv12I	GWGCWC	6 cut(s)	389, 1225, 1379, 1882, 1912, 2608
BccI	CCATC	4 cut(s)	287, 818, 1735, 2389
BceAI	ACGGC	4 cut(s)	52, 301, 382, 1622
BcgI	CGANNNNNNTGC	2 cut(s)	353, 387
BciT130I	CCWGG	5 cut(s)	241, 579, 1735, 2233, 2437
BcnI	CCSGG	1 cut(s)	558
BcoDI	GTCTC	7 cut(s)	23, 638, 984, 1089, 1642, 2496, 2527
BcuI	ACTAGT	1 cut(s)	1217
BfoI	RGCGCY	2 cut(s)	291, 2575
BfrI	CTTAAG	1 cut(s)	2801
BfuAI	ACCTGC	2 cut(s)	1061, 1252
BlpI	GCTNAGC	2 cut(s)	388, 495
Bme1390I	CCNGG	6 cut(s)	241, 558, 579, 1735, 2233, 2437
Bme18I	GGWCC	3 cut(s)	131, 841, 2457
BmeT110I	CYCGRG	3 cut(s)	13, 1923, 2130
BmgT120I	GGNCC	7 cut(s)	61, 131, 323, 636, 841, 2128, 2457
BmrFI	CCNGG	6 cut(s)	241, 558, 579, 1735, 2233, 2437
BmsI	GCATC	2 cut(s)	1486, 2248
BmtI	GCTAGC	1 cut(s)	2217
BpiI	GAAGAC	6 cut(s)	63, 945, 1128, 1692, 2303, 2322
BplI	GAGNNNNNCTC	2 cut(s)	1469, 1501
BpmI	CTGGAG	2 cut(s)	124, 1673
Bpu10I	CCTNAGC	1 cut(s)	2028
Bpu1102I	GCTNAGC	2 cut(s)	388, 495
BpuEI	CTTGAG	2 cut(s)	1733, 2207
BpuMI	CCSGG	1 cut(s)	558
BsaAI	YACGTR	3 cut(s)	1790, 1883, 2603
BsaBI	GATNNNNATC	2 cut(s)	813, 1017
BsaHI	GRCGYC	2 cut(s)	422, 506
BsaI	GGTCTC	2 cut(s)	23, 2496
BsaWI	WCCGGW	2 cut(s)	128, 1123
Bsc4I	CCNNNNNNNGG	9 cut(s)	191, 443, 584, 730, 824, 2136, 2137, 2645, 2803
Bse118I	RCCGGY	3 cut(s)	340, 499, 1123
Bse1I	ACTGG	5 cut(s)	638, 937, 976, 1656, 2657
Bse8I	GATNNNNATC	2 cut(s)	813, 1017
BseBI	CCWGG	5 cut(s)	241, 579, 1735, 2233, 2437
BseGI	GGATG	1 cut(s)	2728
BseJI	GATNNNNATC	2 cut(s)	813, 1017
BseLI	CCNNNNNNNGG	9 cut(s)	191, 443, 584, 730, 824, 2136, 2137, 2645, 2803
BseNI	ACTGG	5 cut(s)	638, 937, 976, 1656, 2657
BseRI	GAGGAG	9 cut(s)	73, 76, 127, 238, 292, 400, 1236, 1660, 1760
BseX3I	CGGCCG	1 cut(s)	431
BseYI	CCCAGC	2 cut(s)	106, 2574
BsgI	GTGCAG	1 cut(s)	1280
Bsh1236I	CGCG	5 cut(s)	180, 395, 430, 442, 545
Bsh1285I	CGRYCG	2 cut(s)	178, 434
BshFI	GGCC	9 cut(s)	62, 239, 324, 340, 433, 637, 828, 2129, 2638
BshNI	GGYRCC	1 cut(s)	2753
BshTI	ACCGGT	1 cut(s)	1123
BsiEI	CGRYCG	2 cut(s)	178, 434
BsiHKAI	GWGCWC	6 cut(s)	389, 1225, 1379, 1882, 1912, 2608
BsiHKCI	CYCGRG	3 cut(s)	13, 1923, 2130
BsiSI	CCGG	8 cut(s)	51, 129, 171, 321, 341, 500, 557, 1124
BsiWI	CGTACG	1 cut(s)	2468
BslFI	GGGAC	1 cut(s)	827
BslI	CCNNNNNNNGG	9 cut(s)	191, 443, 584, 730, 824, 2136, 2137, 2645, 2803
BsmAI	GTCTC	7 cut(s)	23, 638, 984, 1089, 1642, 2496, 2527
BsmFI	GGGAC	1 cut(s)	827
BsnI	GGCC	9 cut(s)	62, 239, 324, 340, 433, 637, 828, 2129, 2638
Bso31I	GGTCTC	2 cut(s)	23, 2496
BsoBI	CYCGRG	3 cut(s)	13, 1923, 2130
Bsp1286I	GDGCHC	7 cut(s)	199, 389, 1225, 1379, 1882, 1912, 2608
Bsp1720I	GCTNAGC	2 cut(s)	388, 495
Bsp68I	TCGCGA	1 cut(s)	180
BspANI	GGCC	9 cut(s)	62, 239, 324, 340, 433, 637, 828, 2129, 2638
BspFNI	CGCG	5 cut(s)	180, 395, 430, 442, 545
BspMI	ACCTGC	2 cut(s)	1061, 1252
BspOI	GCTAGC	1 cut(s)	2217
BspPI	GGATC	9 cut(s)	117, 130, 686, 809, 1007, 1020, 1189, 2243, 2256
BspQI	GCTCTTC	2 cut(s)	377, 2425
BspT107I	GGYRCC	1 cut(s)	2753
BspTI	CTTAAG	1 cut(s)	2801
BspTNI	GGTCTC	2 cut(s)	23, 2496
BsrBI	CCGCTC	2 cut(s)	1480, 1799
BsrFI	RCCGGY	3 cut(s)	340, 499, 1123
BsrI	ACTGG	5 cut(s)	638, 937, 976, 1656, 2657
BssAI	RCCGGY	3 cut(s)	340, 499, 1123
BssNI	GRCGYC	2 cut(s)	422, 506
BssT1I	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2460
Bst2UI	CCWGG	5 cut(s)	241, 579, 1735, 2233, 2437
Bst4CI	ACNGT	5 cut(s)	418, 884, 1186, 2473, 2634
Bst6I	CTCTTC	5 cut(s)	94, 377, 857, 1620, 2425
BstACI	GRCGYC	2 cut(s)	422, 506
BstAFI	CTTAAG	1 cut(s)	2801
BstBAI	YACGTR	3 cut(s)	1790, 1883, 2603
BstC8I	GCNNGC	7 cut(s)	501, 798, 1542, 1813, 2100, 2161, 2215
BstDSI	CCRYGG	2 cut(s)	428, 440
BstENI	CCTNNNNNAGG	1 cut(s)	2801
BstF5I	GGATG	1 cut(s)	2728
BstFNI	CGCG	5 cut(s)	180, 395, 430, 442, 545
BstH2I	RGCGCY	2 cut(s)	291, 2575
BstHHI	GCGC	3 cut(s)	290, 2224, 2574
BstMAI	GTCTC	7 cut(s)	23, 638, 984, 1089, 1642, 2496, 2527
BstMCI	CGRYCG	2 cut(s)	178, 434
BstNI	CCWGG	5 cut(s)	241, 579, 1735, 2233, 2437
BstNSI	RCATGY	2 cut(s)	1039, 1451
BstSCI	CCNGG	6 cut(s)	239, 556, 577, 1733, 2231, 2435
BstUI	CGCG	5 cut(s)	180, 395, 430, 442, 545
BstV2I	GAAGAC	6 cut(s)	63, 945, 1128, 1692, 2303, 2322
BstX2I	RGATCY	5 cut(s)	122, 814, 1012, 1194, 2248
BstXI	CCANNNNNNTGG	1 cut(s)	1741
BstYI	RGATCY	5 cut(s)	122, 814, 1012, 1194, 2248
BstZI	CGGCCG	1 cut(s)	431
BsuRI	GGCC	9 cut(s)	62, 239, 324, 340, 433, 637, 828, 2129, 2638
BtgI	CCRYGG	2 cut(s)	428, 440
BtsCI	GGATG	1 cut(s)	2728
BtsI	GCAGTG	2 cut(s)	2112, 2224
BtsIMutI	CAGTG	3 cut(s)	889, 2112, 2224
BtuMI	TCGCGA	1 cut(s)	180
BveI	ACCTGC	2 cut(s)	1061, 1252
Cac8I	GCNNGC	7 cut(s)	501, 798, 1542, 1813, 2100, 2161, 2215
CaiI	CAGNNNCTG	1 cut(s)	1493
CciNI	GCGGCCGC	1 cut(s)	431
CfoI	GCGC	3 cut(s)	290, 2224, 2574
Cfr10I	RCCGGY	3 cut(s)	340, 499, 1123
Cfr13I	GGNCC	7 cut(s)	61, 131, 323, 636, 841, 2128, 2457
Cfr42I	CCGCGG	2 cut(s)	431, 443
CseI	GACGC	3 cut(s)	495, 551, 2316
Csp6I	GTAC	5 cut(s)	1121, 1560, 2469, 2630, 2741
CspAI	ACCGGT	1 cut(s)	1123
CspCI	CAANNNNNGTGG	2 cut(s)	2326, 2361
CviAII	CATG	4 cut(s)	1036, 1417, 1448, 2203
CviQI	GTAC	5 cut(s)	1121, 1560, 2469, 2630, 2741
DraI	TTTAAA	2 cut(s)	894, 1531
DrdI	GACNNNNNNGTC	1 cut(s)	421
DseDI	GACNNNNNNGTC	1 cut(s)	421
EaeI	YGGCCR	2 cut(s)	237, 431
EagI	CGGCCG	1 cut(s)	431
Eam1104I	CTCTTC	5 cut(s)	94, 377, 857, 1620, 2425
EarI	CTCTTC	5 cut(s)	94, 377, 857, 1620, 2425
EciI	GGCGGA	1 cut(s)	286
Ecl136II	GAGCTC	3 cut(s)	387, 1377, 1910
EclXI	CGGCCG	1 cut(s)	431
Eco130I	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2460
Eco24I	GRGCYC	4 cut(s)	199, 389, 1379, 1912
Eco31I	GGTCTC	2 cut(s)	23, 2496
Eco32I	GATATC	1 cut(s)	1636
Eco47I	GGWCC	3 cut(s)	131, 841, 2457
Eco47III	AGCGCT	1 cut(s)	2573
Eco52I	CGGCCG	1 cut(s)	431
Eco53kI	GAGCTC	3 cut(s)	387, 1377, 1910
Eco72I	CACGTG	2 cut(s)	1790, 1883
Eco88I	CYCGRG	3 cut(s)	13, 1923, 2130
EcoICRI	GAGCTC	3 cut(s)	387, 1377, 1910
EcoNI	CCTNNNNNAGG	1 cut(s)	2801
EcoRII	CCWGG	5 cut(s)	239, 577, 1733, 2231, 2435
EcoRV	GATATC	1 cut(s)	1636
EcoT14I	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2460
EcoT38I	GRGCYC	4 cut(s)	199, 389, 1379, 1912
ErhI	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2460
FaeI	CATG	4 cut(s)	1039, 1420, 1451, 2206
FaqI	GGGAC	1 cut(s)	827
FatI	CATG	4 cut(s)	1035, 1416, 1447, 2202
FauI	CCCGC	3 cut(s)	367, 435, 538
FblI	GTMKAC	1 cut(s)	742
FokI	GGATG	1 cut(s)	2715
FriOI	GRGCYC	4 cut(s)	199, 389, 1379, 1912
GlaI	GCGC	3 cut(s)	289, 2223, 2573
GsaI	CCCAGC	2 cut(s)	110, 2578
GsuI	CTGGAG	2 cut(s)	124, 1673
HaeII	RGCGCY	2 cut(s)	291, 2575
HaeIII	GGCC	9 cut(s)	62, 239, 324, 340, 433, 637, 828, 2129, 2638
HapII	CCGG	8 cut(s)	51, 129, 171, 321, 341, 500, 557, 1124
HgaI	GACGC	3 cut(s)	495, 551, 2316
HhaI	GCGC	3 cut(s)	290, 2224, 2574
Hin1I	GRCGYC	2 cut(s)	422, 506
Hin1II	CATG	4 cut(s)	1039, 1420, 1451, 2206
Hin6I	GCGC	3 cut(s)	288, 2222, 2572
HinP1I	GCGC	3 cut(s)	288, 2222, 2572
HincII	GTYRAC	1 cut(s)	1855
HindII	GTYRAC	1 cut(s)	1855
HindIII	AAGCTT	3 cut(s)	261, 760, 2808
HinfI	GANTC	9 cut(s)	275, 293, 317, 941, 1055, 1160, 1207, 1322, 1472
HpaII	CCGG	8 cut(s)	51, 129, 171, 321, 341, 500, 557, 1124
HphI	GGTGA	4 cut(s)	430, 694, 1478, 2485
Hpy166II	GTNNAC	3 cut(s)	346, 743, 1855
Hpy8I	GTNNAC	3 cut(s)	346, 743, 1855
Hpy99I	CGWCG	6 cut(s)	353, 356, 368, 418, 427, 517
HpyCH4III	ACNGT	5 cut(s)	418, 884, 1186, 2473, 2634
HpyCH4IV	ACGT	4 cut(s)	422, 1789, 1882, 2602
HpySE526I	ACGT	4 cut(s)	422, 1789, 1882, 2602
Hsp92I	GRCGYC	2 cut(s)	422, 506
Hsp92II	CATG	4 cut(s)	1039, 1420, 1451, 2206
HspAI	GCGC	3 cut(s)	288, 2222, 2572
KroI	GCCGGC	1 cut(s)	499
KroNI	GCCGGC	1 cut(s)	501
KspI	CCGCGG	2 cut(s)	431, 443
LguI	GCTCTTC	2 cut(s)	377, 2425
LweI	GCATC	2 cut(s)	1486, 2248
MaeII	ACGT	4 cut(s)	422, 1789, 1882, 2602
MaeIII	GTNAC	5 cut(s)	418, 573, 1204, 1433, 1489
MbiI	CCGCTC	2 cut(s)	1480, 1799
MflI	RGATCY	5 cut(s)	122, 814, 1012, 1194, 2248
MhlI	GDGCHC	7 cut(s)	199, 389, 1225, 1379, 1882, 1912, 2608
MlyI	GAGTC	1 cut(s)	1201
MmeI	TCCRAC	2 cut(s)	979, 2421
MroNI	GCCGGC	1 cut(s)	499
MroXI	GAANNNNTTC	7 cut(s)	8, 224, 866, 1282, 2195, 2789, 2819
MseI	TTAA	8 cut(s)	23, 717, 893, 1530, 1952, 2568, 2679, 2802
MslI	CAYNNNNRTG	1 cut(s)	1452
MspA1I	CMGCKG	5 cut(s)	430, 442, 1364, 1805, 1850
MspCI	CTTAAG	1 cut(s)	2801
MspI	CCGG	8 cut(s)	51, 129, 171, 321, 341, 500, 557, 1124
MspR9I	CCNGG	6 cut(s)	241, 558, 579, 1735, 2233, 2437
MvaI	CCWGG	5 cut(s)	241, 579, 1735, 2233, 2437
MvnI	CGCG	5 cut(s)	180, 395, 430, 442, 545
NaeI	GCCGGC	1 cut(s)	501
NciI	CCSGG	1 cut(s)	558
NgoMIV	GCCGGC	1 cut(s)	499
NheI	GCTAGC	1 cut(s)	2213
NlaIII	CATG	4 cut(s)	1039, 1420, 1451, 2206
NmeAIII	GCCGAG	1 cut(s)	215
NmuCI	GTSAC	2 cut(s)	418, 1204
NotI	GCGGCCGC	1 cut(s)	431
NruI	TCGCGA	1 cut(s)	180
NspI	RCATGY	2 cut(s)	1039, 1451
PasI	CCCWGGG	1 cut(s)	2232
PciSI	GCTCTTC	2 cut(s)	377, 2425
PcsI	WCGNNNNNNNCGW	2 cut(s)	360, 419
PdiI	GCCGGC	1 cut(s)	501
PdmI	GAANNNNTTC	7 cut(s)	8, 224, 866, 1282, 2195, 2789, 2819
PfeI	GAWTC	8 cut(s)	275, 293, 317, 941, 1055, 1160, 1322, 1472
Pfl23II	CGTACG	1 cut(s)	2468
PinAI	ACCGGT	1 cut(s)	1123
Ple19I	CGATCG	1 cut(s)	178
PleI	GAGTC	1 cut(s)	1201
PmaCI	CACGTG	2 cut(s)	1790, 1883
PmlI	CACGTG	2 cut(s)	1790, 1883
PpsI	GAGTC	1 cut(s)	1201
Ppu21I	YACGTR	3 cut(s)	1790, 1883, 2603
PshBI	ATTAAT	1 cut(s)	2679
Psp124BI	GAGCTC	3 cut(s)	389, 1379, 1912
Psp6I	CCWGG	5 cut(s)	239, 577, 1733, 2231, 2435
PspCI	CACGTG	2 cut(s)	1790, 1883
PspFI	CCCAGC	2 cut(s)	106, 2574
PspGI	CCWGG	5 cut(s)	239, 577, 1733, 2231, 2435
PspLI	CGTACG	1 cut(s)	2468
PspPI	GGNCC	7 cut(s)	61, 131, 323, 636, 841, 2128, 2457
PstNI	CAGNNNCTG	1 cut(s)	1493
PsuI	RGATCY	5 cut(s)	122, 814, 1012, 1194, 2248
PvuI	CGATCG	1 cut(s)	178
PvuII	CAGCTG	1 cut(s)	1805
RgaI	GCGATCGC	1 cut(s)	178
RruI	TCGCGA	1 cut(s)	180
RsaI	GTAC	5 cut(s)	1122, 1561, 2470, 2631, 2742
RsaNI	GTAC	5 cut(s)	1121, 1560, 2469, 2630, 2741
RseI	CAYNNNNRTG	1 cut(s)	1452
SacI	GAGCTC	3 cut(s)	389, 1379, 1912
SacII	CCGCGG	2 cut(s)	431, 443
SapI	GCTCTTC	2 cut(s)	377, 2425
SaqAI	TTAA	8 cut(s)	23, 717, 893, 1530, 1952, 2568, 2679, 2802
Sau96I	GGNCC	7 cut(s)	61, 131, 323, 636, 841, 2128, 2457
SchI	GAGTC	1 cut(s)	1201
ScrFI	CCNGG	6 cut(s)	241, 558, 579, 1735, 2233, 2437
SduI	GDGCHC	7 cut(s)	199, 389, 1225, 1379, 1882, 1912, 2608
SfaAI	GCGATCGC	1 cut(s)	178
SfaNI	GCATC	2 cut(s)	1486, 2248
Sfr303I	CCGCGG	2 cut(s)	431, 443
SgfI	GCGATCGC	1 cut(s)	178
SgrBI	CCGCGG	2 cut(s)	431, 443
SinI	GGWCC	3 cut(s)	131, 841, 2457
SmiMI	CAYNNNNRTG	1 cut(s)	1452
SmlI	CTYRAG	3 cut(s)	1712, 2186, 2801
SmoI	CTYRAG	3 cut(s)	1712, 2186, 2801
SpeI	ACTAGT	1 cut(s)	1217
SspI	AATATT	1 cut(s)	2344
SstI	GAGCTC	3 cut(s)	389, 1379, 1912
StyD4I	CCNGG	6 cut(s)	239, 556, 577, 1733, 2231, 2435
StyI	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2460
TaaI	ACNGT	5 cut(s)	418, 884, 1186, 2473, 2634
TaiI	ACGT	4 cut(s)	425, 1792, 1885, 2605
TaqI	TCGA	9 cut(s)	114, 333, 363, 413, 515, 564, 1049, 1638, 2793
TaqII	GACCGA	1 cut(s)	829
TatI	WGTACW	2 cut(s)	1559, 2629
TfiI	GAWTC	8 cut(s)	275, 293, 317, 941, 1055, 1160, 1322, 1472
Tru1I	TTAA	8 cut(s)	23, 717, 893, 1530, 1952, 2568, 2679, 2802
Tru9I	TTAA	8 cut(s)	23, 717, 893, 1530, 1952, 2568, 2679, 2802
TscAI	CASTG	3 cut(s)	889, 2112, 2224
TseFI	GTSAC	2 cut(s)	418, 1204
Tsp45I	GTSAC	2 cut(s)	418, 1204
TspDTI	ATGAA	8 cut(s)	17, 582, 1152, 1413, 1458, 2190, 2349, 2717
TspRI	CASTG	3 cut(s)	889, 2112, 2224
Vha464I	CTTAAG	1 cut(s)	2801
VpaK11BI	GGWCC	3 cut(s)	131, 841, 2457
VspI	ATTAAT	1 cut(s)	2679
XagI	CCTNNNNNAGG	1 cut(s)	2801
XapI	RAATTY	2 cut(s)	1300, 2596
XceI	RCATGY	2 cut(s)	1039, 1451
XmiI	GTMKAC	1 cut(s)	742
XmnI	GAANNNNTTC	7 cut(s)	8, 224, 866, 1282, 2195, 2789, 2819
ZraI	GACGTC	1 cut(s)	423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.