Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0004006

Physical Location & Seq

Genomic Coordinates Forward (+)

42658129 .. 42666328

Gene Structure 8200 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1181300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2922 bp

ATGAACGACTTCGAGGGTCTCTTGGCTTCCGATTACGGCTTCAAGCCCTCTGGCAAGTCGGCCCCAATGTCTGCTTCTTCTGCTAATTCTTCTTCAAAGTCCTCAAATTTTGATCTTGGATCTACTGGGACCTCCCGATCAGCTCGTGCCACCAATTCCTTTAGTGGGTCAGTCGTCAACGATCGCGATTCGATCTTCGGACCCTCGAAAGGTCAAGACTTTGGCGGGTCGGCGCGGTATCCCGGCAAATTGGAGAGCCGCGGCGAGGATGCGGCTTTCAACTTCGATTCAATGTTTGGCGGGCCTGCTGATTCGGTTCCAAAGTCGTCGAATCCGGGGCCCGTTTTTGATAAACCTGTTTACGATGACGACATTTTCGACGGCGTTCCGGGGCTGAAGAGCACGGCTGCGAAAGTTAAGTACGAGGACGTTTTCTCGTCGGTGACGTCCCTGCCGTCCAAAGGGAGTAGTAGAACTAGTGGGTTTGATGATCTTCTTGGTGGGTTTGGGAAGGCTGAGCCCCAATCGAAAAGCTCAGGGTCCAGAGGATCGGTTAAAACGGAGAAGGGCGTGCCCGGTTTGGATGATTTGCTACCTGGGTTTGGAGGTGGTATTTCCCCGAGTGAAAGGTCAACCTCAGAGGCCAATTGGCCCCCTGAAACAACTGCCAATAATGTGTCTAAAACAAACTCCAAGGTGATGGAAGATCCTTTTGTAGTATTAGGGCAGTATAGTGATCCCTTGAAAGAAATAAGTAGACGTTCCAAATCAGGAAGCTCAAAGGTTGATAGTCCATCTGTTAATAATGGGCGAGCATTTGATGATATTGATCCCTTTGATGGCCTTGGAAAGTCAGTCCCAGCATTTTCTTCAGGGAGAAATAACAGGGGAAATGATAGTGGCAATTTAAGGGCAGATACAAGCGTAAATAACAGCAGAGCTTCAACTAGTAAAGAATCAACTGAAAAGCCTTCTGTGAGAAGTCCAGATAACCTGTCTCAGAAGAAGGTTCCTATTGAAGACCATTGGGATTCTCATCAGACCCTGTTTGACATGCCTACAGTCTCAAGTGATTCTCACAAATCATCTGGTCAAATGATGTCTCCACCTTCCTACGTAAATCCTAGTCCTAAGGAAGTAAATCTACAAGTGGATAGGTCTCCAAGATCTGAAGAAAACATGGATTCATCTGATCATGTATGGCTTACCGTATCAGAGATCCCTCTAATGACTCAGCCCACTAGTGCTCCACCACCGTCAAGACCTCCTCCTCCAAGACCAGTGCAGGTTTCAAAGGCAAGAATGGGTTCCCCTGCTTCCATAAATGCGAGAAGGAATGCTAGTGATTCTTCTACACAATTCTTTCAAGCTCTGAAGTCAGCTCCTGCTGCAGCGAGAGGCTCGAGTGCCTCTACAATTGATGAACTTGAAGATTTTGCCAGGGGTAAGAACCAGAATAACTTTTCTGAACATGCAAATGGTCTTGCTGGTGAAGAATTGGAGATGAATTCAGTTGCTGCTGCCATGAAAGAGGCTATGGATAAAGCTGAGGCTAAATTTAGACATGCGAAGGAAGTGAGAGAGAGAGGAAGTACAAAGGCTGCTAGAAGTAAAGAAGCACAGCTGGAAAAGGATGAAAAAGCTATGCAAGAAAAACTGGAGAGGTTTGACAGTGAACGGCTGCAGAGGGAAGGTGAAGAGGAAAATATGGAACAAAGTAGAGTGGAGAAAGAGAAGGAAATTGAGAGGGTGTGGGAAGAGAAAGAGAGAGAACAAAGGAGACTTGAAAAGGAAAGGGAGAGAACCAGGGAAATGGAGTTGGAAAGGGATAAGGCCAGACAAGCTGTGGAAAGGGCTACTAGGGAAGCACGAGAGAGAGCAGCTACTGAAGCTCGCATGAAAGCTGAAAGGGCTAAAGCAGAGAGAGCAGCTGTAGACAAGGCAACTGCTGAAGCTAGAGAACGTGCTGAAAGGGCTGCTGTTCAGAGAGCTCAAAGTGAAGCTCGAGAAAGAGCTGCAGCAGAGGCAAAGGAAAGAGCAGAAAAGGCTGCTGCAGAAGCCAGAGAAAGAGCAAATGCAGAAGCAAAGGAGAGGGAAGCAAGAGAGAGAGCTGCTGCAGCTAGGGCTGGAGCTGAAGCACGAACGAGAGCTGAACGTGCTGCGGTAGAAAGGGCTGCTGCGGAGGCTCGAGAAAGGGCTGCTGCGGAGGCTCGAGAAAGAGCTGCTGCTGCAGCAAGGGCGAACCAGCAAAGGAGTGACAATGATCTTGAGCACTTTTTCAACATGGGGCGAGCTAGCAGTGCACCACGACCTAGGGCTAACTCATCGGATCCATTTCAGTATAGGCAAGAGCCTGAAGTGCCAAAGGCATCGAGCACTGCATCCTCGAACATAAGGAAAGCAAATTCAAGTACAAATATTGTTGATGATCTTTCAGCGATTTTTGGAGCTGCTCCATCTTCTGGAGGAGAGTTCCAGGATGTTGAAGGAGAGACTGAAGAAAGGCGACGAGCCAGGTTGGAACGACACCAAAGGACCCAGGAGCGTACGTTGAAAGCACTTGCTGAAAAGAATGAGAGGGACCTTCAAGCCCAAAGAGAACAAGCCGAGAGACATAGGATTGCTGAAACACTAGATGTTGAGATCAAGCGTTGGGCTGTAGGGAAAGAGGGGAACTTGCGTGCTCTACTTTCGACCATGCAATATGTGCTGTGGCCTGAGTGTGGTTGGCAGCCAGTTTCTTTAACGGATATGATTACAGCTGCTTCAGTTAAGAAAGTATATAGGAAGGCAACTTTGTGCATTCATCCCGATAAGGTACAACAGAAGGGTGCTAATCTTCAACAGAAGTATATAGCTGAGAAGGTGTTCGACCTCCTTAAGGAAGCTTGGAACAAGTTCAATTCGGAGGAGCTTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0009504 GO:0016020 GO:0016192 GO:0031982 GO:0043226 GO:0043227 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0071944 GO:0072583 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

974

Amino Acids

106.84

Weight (kDa)

6.9

Isoelectric Point (pI)

48.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12770 AT4G12770 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G36520
fragaria_vesca	FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040
malus_domestica	MD00G1181300.v1.1 MD15G1135900.v1.1
prunus_persica	Prupe.4G277600_v2.0.a1 Prupe.4G277600_v2.0.a1
pyrus_communis	pycom15g12250 pycom520g00360
rosa_chinensis	RchiOBHm_Chr2g0122701
rosa_laevigata	RLG00000018706
rosa_multiflora	Rmu_sc0008259.1_g000015 Rmu_sc0017734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00121300
rosa_rugosa	Rorug02G0241600 Rorug02G0241700
rosa_samantha	Rh2AG299900 Rh2BG308000 Rh2CG286200 Rh2CG286700 Rh2DG324000
rosa_wichuraiana	Rw2G023840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	449
Acc36I	ACCTGC	1 cut(s)	1276
AccB7I	CCANNNNNTGG	1 cut(s)	2462
AccI	GTMKAC	2 cut(s)	757, 1935
AccII	CGCG	3 cut(s)	186, 235, 261
AciI	CCGC	9 cut(s)	225, 235, 259, 261, 272, 300, 2162, 2180, 2204
AclWI	GGATC	8 cut(s)	127, 556, 701, 731, 824, 1213, 2324, 2337
AcsI	RAATTY	4 cut(s)	106, 1507, 1556, 2404
AcyI	GRCGYC	1 cut(s)	446
AfaI	GTAC	5 cut(s)	422, 1594, 2413, 2548, 2820
AfiI	CCNNNNNNNGG	9 cut(s)	165, 209, 265, 461, 602, 839, 2462, 2723, 2881
AflII	CTTAAG	1 cut(s)	2879
AhlI	ACTAGT	3 cut(s)	476, 947, 1241
AjnI	CCWGG	6 cut(s)	595, 1439, 1805, 2475, 2513, 2538
AjuI	GAANNNNNNNTTGG	2 cut(s)	58, 90
Alw21I	GWGCWC	7 cut(s)	404, 1249, 1993, 2274, 2305, 2378, 2686
Alw26I	GTCTC	8 cut(s)	23, 1002, 1069, 1107, 1164, 1774, 2486, 2605
Alw44I	GTGCAC	1 cut(s)	2301
AlwI	GGATC	8 cut(s)	127, 556, 701, 731, 824, 1213, 2324, 2337
AlwNI	CAGNNNCTG	4 cut(s)	1045, 1385, 1517, 1886
Ama87I	CYCGRG	5 cut(s)	619, 1402, 2004, 2187, 2211
AoxI	GGCC	8 cut(s)	60, 302, 338, 642, 650, 841, 1833, 2714
ApaI	GGGCCC	1 cut(s)	342
ApaLI	GTGCAC	1 cut(s)	2301
ApoI	RAATTY	4 cut(s)	106, 1507, 1556, 2404
ArsI	GACNNNNNNTTYG	2 cut(s)	359, 391
Asp700I	GAANNNNTTC	4 cut(s)	8, 1306, 2867, 2897
AspA2I	CCTAGG	1 cut(s)	2312
AspLEI	GCGC	1 cut(s)	235
AsuC2I	CCSGG	4 cut(s)	243, 336, 390, 576
AsuHPI	GGTGA	4 cut(s)	454, 709, 1502, 1706
AsuNHI	GCTAGC	1 cut(s)	2294
AvaI	CYCGRG	5 cut(s)	619, 1402, 2004, 2187, 2211
AvaII	GGWCC	5 cut(s)	129, 200, 540, 2535, 2581
AvrII	CCTAGG	1 cut(s)	2312
AxyI	CCTNAGG	1 cut(s)	1131
BaeGI	GKGCMC	3 cut(s)	342, 576, 2305
BaeI	ACNNNNGTAYC	2 cut(s)	909, 942
BamHI	GGATCC	1 cut(s)	2329
BanII	GRGCYC	3 cut(s)	342, 522, 1993
BarI	GAAGNNNNNNTAC	2 cut(s)	1128, 1160
BauI	CACGAG	2 cut(s)	144, 1869
BbsI	GAAGAC	1 cut(s)	1026
Bbv12I	GWGCWC	7 cut(s)	404, 1249, 1993, 2274, 2305, 2378, 2686
BbvCI	CCTCAGC	1 cut(s)	1548
BccI	CCATC	4 cut(s)	694, 802, 833, 2464
BceAI	ACGGC	5 cut(s)	52, 397, 420, 439, 1694
BciT130I	CCWGG	6 cut(s)	597, 1441, 1807, 2477, 2515, 2540
BciVI	GTATCC	1 cut(s)	249
BclI	TGATCA	1 cut(s)	1192
BcnI	CCSGG	4 cut(s)	243, 336, 390, 576
BcoDI	GTCTC	8 cut(s)	23, 1002, 1069, 1107, 1164, 1774, 2486, 2605
BcuI	ACTAGT	3 cut(s)	476, 947, 1241
BfmI	CTRYAG	9 cut(s)	1059, 1389, 1682, 1932, 2016, 2052, 2115, 2229, 2658
BfrI	CTTAAG	1 cut(s)	2879
BfuAI	ACCTGC	1 cut(s)	1276
BfuI	GTATCC	1 cut(s)	249
BglII	AGATCT	1 cut(s)	1166
BlnI	CCTAGG	1 cut(s)	2312
BlpI	GCTNAGC	1 cut(s)	516
Bme18I	GGWCC	5 cut(s)	129, 200, 540, 2535, 2581
BmeT110I	CYCGRG	5 cut(s)	619, 1402, 2004, 2187, 2211
BmrI	ACTGGG	1 cut(s)	135
BmsI	GCATC	3 cut(s)	259, 2378, 2390
BmtI	GCTAGC	1 cut(s)	2298
BmuI	ACTGGG	1 cut(s)	135
BpiI	GAAGAC	1 cut(s)	1026
BpmI	CTGGAG	3 cut(s)	1679, 2148, 2484
Bpu10I	CCTNAGC	2 cut(s)	535, 1548
Bpu1102I	GCTNAGC	1 cut(s)	516
BpuEI	CTTGAG	2 cut(s)	1051, 2288
BpuMI	CCSGG	4 cut(s)	243, 336, 390, 576
BsaAI	YACGTR	1 cut(s)	1117
BsaBI	GATNNNNATC	2 cut(s)	828, 1035
BsaHI	GRCGYC	1 cut(s)	446
BsaI	GGTCTC	2 cut(s)	23, 1164
BsaXI	ACNNNNNCTCC	4 cut(s)	1231, 1261, 2534, 2564
Bsc4I	CCNNNNNNNGG	9 cut(s)	165, 209, 265, 461, 602, 839, 2462, 2723, 2881
Bse1I	ACTGG	4 cut(s)	130, 1280, 1662, 2735
Bse21I	CCTNAGG	1 cut(s)	1131
Bse8I	GATNNNNATC	2 cut(s)	828, 1035
BseBI	CCWGG	6 cut(s)	597, 1441, 1807, 2477, 2515, 2540
BseGI	GGATG	6 cut(s)	274, 589, 1639, 2381, 2485, 2806
BseJI	GATNNNNATC	2 cut(s)	828, 1035
BseLI	CCNNNNNNNGG	9 cut(s)	165, 209, 265, 461, 602, 839, 2462, 2723, 2881
BseMII	CTCAG	8 cut(s)	507, 549, 651, 1013, 1247, 1539, 2709, 2850
BseNI	ACTGG	4 cut(s)	130, 1280, 1662, 2735
BseRI	GAGGAG	3 cut(s)	1257, 1260, 2481
BseSI	GKGCMC	3 cut(s)	342, 576, 2305
BseYI	CCCAGC	1 cut(s)	859
BsgI	GTGCAG	1 cut(s)	1304
Bsh1236I	CGCG	3 cut(s)	186, 235, 261
Bsh1285I	CGRYCG	1 cut(s)	184
BshFI	GGCC	8 cut(s)	62, 304, 340, 644, 652, 843, 1835, 2716
BsiEI	CGRYCG	1 cut(s)	184
BsiHKAI	GWGCWC	7 cut(s)	404, 1249, 1993, 2274, 2305, 2378, 2686
BsiHKCI	CYCGRG	5 cut(s)	619, 1402, 2004, 2187, 2211
BsiSI	CCGG	4 cut(s)	243, 335, 389, 576
BsiWI	CGTACG	1 cut(s)	2546
BslFI	GGGAC	4 cut(s)	142, 433, 842, 2594
BslI	CCNNNNNNNGG	9 cut(s)	165, 209, 265, 461, 602, 839, 2462, 2723, 2881
BsmAI	GTCTC	8 cut(s)	23, 1002, 1069, 1107, 1164, 1774, 2486, 2605
BsmFI	GGGAC	4 cut(s)	142, 433, 842, 2594
BsmI	GAATGC	2 cut(s)	1342, 2802
BsnI	GGCC	8 cut(s)	62, 304, 340, 644, 652, 843, 1835, 2716
Bso31I	GGTCTC	2 cut(s)	23, 1164
BsoBI	CYCGRG	5 cut(s)	619, 1402, 2004, 2187, 2211
Bsp120I	GGGCCC	1 cut(s)	338
Bsp1720I	GCTNAGC	1 cut(s)	516
Bsp68I	TCGCGA	1 cut(s)	186
BspACI	CCGC	9 cut(s)	225, 235, 259, 261, 272, 300, 2162, 2180, 2204
BspANI	GGCC	8 cut(s)	62, 304, 340, 644, 652, 843, 1835, 2716
BspCNI	CTCAG	8 cut(s)	508, 548, 650, 1012, 1246, 1540, 2710, 2851
BspFNI	CGCG	3 cut(s)	186, 235, 261
BspMAI	CTGCAG	6 cut(s)	1393, 1686, 2020, 2056, 2119, 2233
BspMI	ACCTGC	1 cut(s)	1276
BspOI	GCTAGC	1 cut(s)	2298
BspPI	GGATC	8 cut(s)	127, 556, 701, 731, 824, 1213, 2324, 2337
BspQI	GCTCTTC	1 cut(s)	392
BspTI	CTTAAG	1 cut(s)	2879
BspTNI	GGTCTC	2 cut(s)	23, 1164
BsrI	ACTGG	4 cut(s)	130, 1280, 1662, 2735
BssNI	GRCGYC	1 cut(s)	446
BssSI	CACGAG	2 cut(s)	144, 1869
BssT1I	CCWWGG	3 cut(s)	693, 844, 2312
Bst2BI	CACGAG	2 cut(s)	144, 1869
Bst2UI	CCWGG	6 cut(s)	597, 1441, 1807, 2477, 2515, 2540
Bst4CI	ACNGT	4 cut(s)	1063, 1210, 1257, 1673
Bst6I	CTCTTC	3 cut(s)	392, 1692, 1752
BstACI	GRCGYC	1 cut(s)	446
BstAFI	CTTAAG	1 cut(s)	2879
BstAPI	GCANNNNNTGC	1 cut(s)	2707
BstBAI	YACGTR	1 cut(s)	1117
BstC8I	GCNNGC	8 cut(s)	302, 306, 572, 813, 1894, 2292, 2296, 2682
BstDEI	CTNAG	9 cut(s)	516, 535, 637, 999, 1131, 1233, 1548, 2718, 2859
BstDSI	CCRYGG	1 cut(s)	259
BstENI	CCTNNNNNAGG	1 cut(s)	2879
BstF5I	GGATG	6 cut(s)	274, 589, 1639, 2381, 2485, 2806
BstFNI	CGCG	3 cut(s)	186, 235, 261
BstHHI	GCGC	1 cut(s)	235
BstMAI	GTCTC	8 cut(s)	23, 1002, 1069, 1107, 1164, 1774, 2486, 2605
BstMCI	CGRYCG	1 cut(s)	184
BstNI	CCWGG	6 cut(s)	597, 1441, 1807, 2477, 2515, 2540
BstNSI	RCATGY	3 cut(s)	1057, 1475, 1568
BstSFI	CTRYAG	9 cut(s)	1059, 1389, 1682, 1932, 2016, 2052, 2115, 2229, 2658
BstSLI	GKGCMC	3 cut(s)	342, 576, 2305
BstSNI	TACGTA	1 cut(s)	1117
BstUI	CGCG	3 cut(s)	186, 235, 261
BstV2I	GAAGAC	1 cut(s)	1026
BstX2I	RGATCY	5 cut(s)	119, 706, 1166, 1218, 2329
BstXI	CCANNNNNNTGG	2 cut(s)	700, 1813
BstYI	RGATCY	5 cut(s)	119, 706, 1166, 1218, 2329
Bsu36I	CCTNAGG	1 cut(s)	1131
BsuI	GTATCC	1 cut(s)	249
BsuRI	GGCC	8 cut(s)	62, 304, 340, 644, 652, 843, 1835, 2716
BtgI	CCRYGG	1 cut(s)	259
BtsCI	GGATG	6 cut(s)	274, 589, 1639, 2381, 2485, 2806
BtsI	GCAGTG	2 cut(s)	2305, 2376
BtsIMutI	CAGTG	4 cut(s)	1287, 1678, 2305, 2376
BtuMI	TCGCGA	1 cut(s)	186
BveI	ACCTGC	1 cut(s)	1276
Cac8I	GCNNGC	8 cut(s)	302, 306, 572, 813, 1894, 2292, 2296, 2682
CaiI	CAGNNNCTG	4 cut(s)	1045, 1385, 1517, 1886
CfoI	GCGC	1 cut(s)	235
Cfr42I	CCGCGG	1 cut(s)	262
Csp6I	GTAC	5 cut(s)	421, 1593, 2412, 2547, 2819
CviAII	CATG	9 cut(s)	1054, 1180, 1196, 1472, 1525, 1565, 1897, 2284, 2698
CviQI	GTAC	5 cut(s)	421, 1593, 2412, 2547, 2819
DdeI	CTNAG	9 cut(s)	516, 535, 637, 999, 1131, 1233, 1548, 2718, 2859
Eam1104I	CTCTTC	3 cut(s)	392, 1692, 1752
EarI	CTCTTC	3 cut(s)	392, 1692, 1752
Ecl136II	GAGCTC	1 cut(s)	1991
Eco105I	TACGTA	1 cut(s)	1117
Eco130I	CCWWGG	3 cut(s)	693, 844, 2312
Eco24I	GRGCYC	3 cut(s)	342, 522, 1993
Eco31I	GGTCTC	2 cut(s)	23, 1164
Eco47I	GGWCC	5 cut(s)	129, 200, 540, 2535, 2581
Eco53kI	GAGCTC	1 cut(s)	1991
Eco81I	CCTNAGG	1 cut(s)	1131
Eco88I	CYCGRG	5 cut(s)	619, 1402, 2004, 2187, 2211
EcoICRI	GAGCTC	1 cut(s)	1991
EcoNI	CCTNNNNNAGG	1 cut(s)	2879
EcoO109I	RGGNCCY	4 cut(s)	129, 338, 2535, 2581
EcoRI	GAATTC	1 cut(s)	1507
EcoRII	CCWGG	6 cut(s)	595, 1439, 1805, 2475, 2513, 2538
EcoT14I	CCWWGG	3 cut(s)	693, 844, 2312
EcoT38I	GRGCYC	3 cut(s)	342, 522, 1993
ErhI	CCWWGG	3 cut(s)	693, 844, 2312
FaeI	CATG	9 cut(s)	1057, 1183, 1199, 1475, 1528, 1568, 1900, 2287, 2701
FaqI	GGGAC	4 cut(s)	142, 433, 842, 2594
FatI	CATG	9 cut(s)	1053, 1179, 1195, 1471, 1524, 1564, 1896, 2283, 2697
FauI	CCCGC	2 cut(s)	218, 293
FbaI	TGATCA	1 cut(s)	1192
FblI	GTMKAC	2 cut(s)	757, 1935
FokI	GGATG	6 cut(s)	281, 596, 1646, 2368, 2492, 2793
FriOI	GRGCYC	3 cut(s)	342, 522, 1993
GlaI	GCGC	1 cut(s)	234
GsaI	CCCAGC	1 cut(s)	863
GsuI	CTGGAG	3 cut(s)	1679, 2148, 2484
HaeIII	GGCC	8 cut(s)	62, 304, 340, 644, 652, 843, 1835, 2716
HapII	CCGG	4 cut(s)	243, 335, 389, 576
HhaI	GCGC	1 cut(s)	235
Hin1I	GRCGYC	1 cut(s)	446
Hin1II	CATG	9 cut(s)	1057, 1183, 1199, 1475, 1528, 1568, 1900, 2287, 2701
Hin6I	GCGC	1 cut(s)	233
HinP1I	GCGC	1 cut(s)	233
HincII	GTYRAC	2 cut(s)	178, 633
HindII	GTYRAC	2 cut(s)	178, 633
HindIII	AAGCTT	1 cut(s)	2886
HpaII	CCGG	4 cut(s)	243, 335, 389, 576
HphI	GGTGA	4 cut(s)	454, 709, 1502, 1706
Hpy166II	GTNNAC	7 cut(s)	178, 361, 633, 758, 1676, 1936, 2303
Hpy8I	GTNNAC	7 cut(s)	178, 361, 633, 758, 1676, 1936, 2303
Hpy99I	CGWCG	4 cut(s)	331, 383, 442, 2511
HpyCH4III	ACNGT	4 cut(s)	1063, 1210, 1257, 1673
HpyCH4IV	ACGT	7 cut(s)	429, 446, 760, 1116, 1963, 2155, 2549
HpyF3I	CTNAG	9 cut(s)	516, 535, 637, 999, 1131, 1233, 1548, 2718, 2859
HpySE526I	ACGT	7 cut(s)	429, 446, 760, 1116, 1963, 2155, 2549
Hsp92I	GRCGYC	1 cut(s)	446
Hsp92II	CATG	9 cut(s)	1057, 1183, 1199, 1475, 1528, 1568, 1900, 2287, 2701
HspAI	GCGC	1 cut(s)	233
Ksp22I	TGATCA	1 cut(s)	1192
KspI	CCGCGG	1 cut(s)	262
LguI	GCTCTTC	1 cut(s)	392
LmnI	GCTCC	7 cut(s)	1252, 1387, 2129, 2447, 2458, 2542, 2911
LweI	GCATC	3 cut(s)	259, 2378, 2390
MaeII	ACGT	7 cut(s)	429, 446, 760, 1116, 1963, 2155, 2549
MaeIII	GTNAC	2 cut(s)	442, 2255
MfeI	CAATTG	2 cut(s)	646, 1416
MflI	RGATCY	5 cut(s)	119, 706, 1166, 1218, 2329
MlyI	GAGTC	1 cut(s)	1225
MmeI	TCCRAC	2 cut(s)	1800, 2499
MroXI	GAANNNNTTC	4 cut(s)	8, 1306, 2867, 2897
MseI	TTAA	7 cut(s)	417, 555, 801, 908, 2744, 2772, 2880
MslI	CAYNNNNRTG	1 cut(s)	1476
MspA1I	CMGCKG	4 cut(s)	261, 1624, 1931, 2762
MspCI	CTTAAG	1 cut(s)	2879
MspI	CCGG	4 cut(s)	243, 335, 389, 576
MunI	CAATTG	2 cut(s)	646, 1416
Mva1269I	GAATGC	2 cut(s)	1342, 2802
MvaI	CCWGG	6 cut(s)	597, 1441, 1807, 2477, 2515, 2540
MvnI	CGCG	3 cut(s)	186, 235, 261
NciI	CCSGG	4 cut(s)	243, 336, 390, 576
NheI	GCTAGC	1 cut(s)	2294
NlaIII	CATG	9 cut(s)	1057, 1183, 1199, 1475, 1528, 1568, 1900, 2287, 2701
NmeAIII	GCCGAG	1 cut(s)	2632
NmuCI	GTSAC	2 cut(s)	442, 2255
NruI	TCGCGA	1 cut(s)	186
NspI	RCATGY	3 cut(s)	1057, 1475, 1568
PaeR7I	CTCGAG	4 cut(s)	1402, 2004, 2187, 2211
PciSI	GCTCTTC	1 cut(s)	392
PcsI	WCGNNNNNNNCGW	3 cut(s)	375, 443, 452
PctI	GAATGC	2 cut(s)	1342, 2802
PdmI	GAANNNNTTC	4 cut(s)	8, 1306, 2867, 2897
PfeI	GAWTC	9 cut(s)	188, 287, 311, 331, 956, 1031, 1073, 1184, 1346
Pfl23II	CGTACG	1 cut(s)	2546
PflMI	CCANNNNNTGG	1 cut(s)	2462
PfoI	TCCNGGA	1 cut(s)	2475
Ple19I	CGATCG	1 cut(s)	184
PleI	GAGTC	1 cut(s)	1225
PpsI	GAGTC	1 cut(s)	1225
Ppu21I	YACGTR	1 cut(s)	1117
PpuMI	RGGWCCY	3 cut(s)	129, 2535, 2581
Psp124BI	GAGCTC	1 cut(s)	1993
Psp5II	RGGWCCY	3 cut(s)	129, 2535, 2581
Psp6I	CCWGG	6 cut(s)	595, 1439, 1805, 2475, 2513, 2538
PspFI	CCCAGC	1 cut(s)	859
PspGI	CCWGG	6 cut(s)	595, 1439, 1805, 2475, 2513, 2538
PspLI	CGTACG	1 cut(s)	2546
PspOMI	GGGCCC	1 cut(s)	338
PspPPI	RGGWCCY	3 cut(s)	129, 2535, 2581
PspXI	VCTCGAGB	1 cut(s)	1402
PstI	CTGCAG	6 cut(s)	1393, 1686, 2020, 2056, 2119, 2233
PstNI	CAGNNNCTG	4 cut(s)	1045, 1385, 1517, 1886
PsuI	RGATCY	5 cut(s)	119, 706, 1166, 1218, 2329
PvuI	CGATCG	1 cut(s)	184
PvuII	CAGCTG	3 cut(s)	1624, 1931, 2762
RruI	TCGCGA	1 cut(s)	186
RsaI	GTAC	5 cut(s)	422, 1594, 2413, 2548, 2820
RsaNI	GTAC	5 cut(s)	421, 1593, 2412, 2547, 2819
RseI	CAYNNNNRTG	1 cut(s)	1476
SacI	GAGCTC	1 cut(s)	1993
SacII	CCGCGG	1 cut(s)	262
SapI	GCTCTTC	1 cut(s)	392
SaqAI	TTAA	7 cut(s)	417, 555, 801, 908, 2744, 2772, 2880
SchI	GAGTC	1 cut(s)	1225
SfaNI	GCATC	3 cut(s)	259, 2378, 2390
SfcI	CTRYAG	9 cut(s)	1059, 1389, 1682, 1932, 2016, 2052, 2115, 2229, 2658
Sfr274I	CTCGAG	4 cut(s)	1402, 2004, 2187, 2211
Sfr303I	CCGCGG	1 cut(s)	262
SgrBI	CCGCGG	1 cut(s)	262
SinI	GGWCC	5 cut(s)	129, 200, 540, 2535, 2581
SlaI	CTCGAG	4 cut(s)	1402, 2004, 2187, 2211
SmiMI	CAYNNNNRTG	1 cut(s)	1476
SmlI	CTYRAG	7 cut(s)	1066, 1402, 2004, 2187, 2211, 2267, 2879
SmoI	CTYRAG	7 cut(s)	1066, 1402, 2004, 2187, 2211, 2267, 2879
SnaBI	TACGTA	1 cut(s)	1117
SpeI	ACTAGT	3 cut(s)	476, 947, 1241
SsiI	CCGC	9 cut(s)	225, 235, 259, 261, 272, 300, 2162, 2180, 2204
SspI	AATATT	1 cut(s)	2419
SstI	GAGCTC	1 cut(s)	1993
StyI	CCWWGG	3 cut(s)	693, 844, 2312
TaaI	ACNGT	4 cut(s)	1063, 1210, 1257, 1673
TaiI	ACGT	7 cut(s)	432, 449, 763, 1119, 1966, 2158, 2552
TatI	WGTACW	2 cut(s)	1592, 2411
TauI	GCSGC	3 cut(s)	261, 264, 275
TfiI	GAWTC	9 cut(s)	188, 287, 311, 331, 956, 1031, 1073, 1184, 1346
Tru1I	TTAA	7 cut(s)	417, 555, 801, 908, 2744, 2772, 2880
Tru9I	TTAA	7 cut(s)	417, 555, 801, 908, 2744, 2772, 2880
TscAI	CASTG	4 cut(s)	1287, 1678, 2305, 2383
TseFI	GTSAC	2 cut(s)	442, 2255
Tsp45I	GTSAC	2 cut(s)	442, 2255
TspDTI	ATGAA	8 cut(s)	17, 1176, 1437, 1520, 1541, 1650, 1913, 2795
TspGWI	ACGGA	2 cut(s)	575, 2762
TspRI	CASTG	4 cut(s)	1287, 1678, 2305, 2383
Van91I	CCANNNNNTGG	1 cut(s)	2462
Vha464I	CTTAAG	1 cut(s)	2879
VneI	GTGCAC	1 cut(s)	2301
VpaK11BI	GGWCC	5 cut(s)	129, 200, 540, 2535, 2581
XagI	CCTNNNNNAGG	1 cut(s)	2879
XapI	RAATTY	4 cut(s)	106, 1507, 1556, 2404
XceI	RCATGY	3 cut(s)	1057, 1475, 1568
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1843
XhoI	CTCGAG	4 cut(s)	1402, 2004, 2187, 2211
XmaJI	CCTAGG	1 cut(s)	2312
XmiI	GTMKAC	2 cut(s)	757, 1935
XmnI	GAANNNNTTC	4 cut(s)	8, 1306, 2867, 2897
ZraI	GACGTC	1 cut(s)	447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.