Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0004006

Physical Location & Seq

Genomic Coordinates Reverse (-)

9914368 .. 9922440

Gene Structure 8073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1135900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2916 bp

ATGAACGACTTCGAGGGTCTCTTGGCCTCCGATTTCGGCTTCAAGCCCTCCGGCAAATCGGCCCCAATGTCTGCTTCTTCTGCTAATTCTTCATCAAAGCCCTCAAATTTTGATCTCGGATCTACTGGGACCTCCCGATCAGCTCGCGCCACCAATTCCTTTAGTGGGTCAATCGCCGACGATCGCGATTCGATCTTCGGATCCTCTAAAGGTCAAGACTTAGGCGATATCTTTGGCGGGTCGGCGCGGTATTCCGGTAAATTGGAGAGCCGCGGCGAGGATGCGGCTTTCAACTTCGATTCAATGTTTGGTGGGTCTGCTGATTCGGTTCCAAAGTCATCGTCCACGAATTCGGGGCCCGTTTACGATAAACCCGTTTACGACGACGACATTTTCGTTGGCGTTCCGGGGCTGAAGAGCACGGCTGCAAAAGTTAAGTACGAGGACATTTTCTCGTCGGTGACGTCGCCGCCGTCCAAAGGGAGTAGTAGAGCCAGTGGGTTTGATGACATTCTTGGCGGGTTTGGCAAGGCCGAGCCCCAATTGAAAAGCTCAGGCTCCAGAGGATCGGATAAAGTGGAGAAGGGCGTGCCCGGCTTCGATGATTTGCTACCTGGGTTTGGAGGCGGTAATGCTCCTAGTGAAAGGTCAACCTCAGAGGCCAGTTGGCCCCATGAATCGACTGCCAATGATGTGTCTAAAACAAACTCCAATGTGATGGAAGATCCTTTTGTAGTATCAGGGCAGTATAGTGACCCCTTGGAAGAAATAAGTAGACTTTCGAAATCAGGAAGCTCGAAGGTTGATAGTCGATCTGTTGATACTGGGCGAGCATTTGATGATATTGATCCCTTTGATGGCCTTGGAAAGTCAGTCCCAACATCTTCATCAGGAAGAAATTACAGGGGAAATGATAGTGTCAATGTAAGGGCAGATACAAGCACAAATAACGGCAGAGCTTCAACTGGTAAAGAATCAACTGTGAAGCCTTCTGTGAGAAGTCCAGATAACCATTCTCAAAAGAAGGCCCCTATTGGAAATCATTGGGATTCTCATCAGACCTTGTTTGATATGCCTACAGTTTCAAGCGATTCTCACAGATCATCTGGTCAAAATATGTCTCCACCTTCCTATGTAAATGTTAGTCCTAAGGAAACAAATGTACAAGCGGATAGGTCTCCAAGATCTGAAGAAAACATGGATTCATTGGATAATGTATGGCTCACTGTATCAGAGATCCCTCTAATGACTCAGCCCACTAGTGCTCCACCACCGTCAAGACCTCCTCCTCCAAGACCAGTGCAAGTTTCAAGGGCAAGAATGGGTTCCCCTGCTTCCACAAATGCAAGAAAGAAGGCTGCTGAATCTTCTACACAGTTCTTTCAAGCTCCGAAGTCGGCCCCTGCTGCAGCGAGAGGCTTGGGTGACTCTCCAATTGATGAACTTGAGGATTTTGCCAGGGGTACGAACCAAACTAACTTTTCTGAACACGCTAATGGCCTTGCTGGTGAAGAATTGGAGATGAATTCAGTTGCTGCTGCCATGAAAGAGACTATGGATAGAGCTGAGGCTAAATTCAGACATGCGAAGGAAGTGAGAGAGAGGGGAAGTACAAAGGCTGCTAGAAGTAAAGAAGCACAGATGGAAAGGGATGAGAAAGTTATGCAAGAAAAACAGGAGAGGTTTGACAGCGAACGTCTGCAGAGGGAAGGTGAAGAGGAAGATATGGAACAGAGTAGAGTGGAGAAAGAGAAGGAAATTGAGAGGGCGTGGGAAGAGAAAGAGAGAGAACAAAGGAGGCTTGAAAAGGAAAGGGAGAGAATCAGAGAAATGGAGAGGGAAAGGGATATGGCCAGACAAGCTGTGGAAAGGGCTACTAGGGAAGCACGAGAGAGAGCAGCTAATGAAGCTCGCATGAAAGCTGAAAGGGCTAAAGCAGAGAGATCTGCTGTAGAAAAGGCAACTGCTGAAGCTAGAGAACGGGCTGAAAGGGCTGCTGTTCAGAGAGCTCAAAGTGAAGCTCGAGAACGAGCTGCAGCAGAGGCAAAGGAAAGAGCAGAAAAGGCTGCTGCAGAAGCCAGAGAAAGAGCAAATGCAGAAGCAAAGGAGAGGGAAGCAAAAGAAAGAGCTGCTGCAGCTAGGGCTGGAGCTGAAGCACGAACTAGAGCTGAACGTGCTGCAGTAGAAAGGGCTGCTGCAGAGGCTCGCGAAAGAGCTGCTGCTGCAGCAAGGGTAAACCAGCAAAGGAGTGATAATGATCTTGAGCACTTTTTCAGCATGGGGCGAGCTAGCAGTGTACCACGACCTAGGGCTAACTCATCGGATCCATTTCAGAATAGGCAAGAGCCTGAAGTGCCAAGGGCATCGACCACTACTTCCTCGAACATAAGGAAAGCAAATTCAACCACAAATATTGTTGATGATCTTTCAGCAATTTTTGGAGGTGTTCCATCTTCTGGAGGAGAGTTCCAGGAAGTTGAAGGAGAGACTGAAGAAAGGCGAAGAGCCAGGTTGGAACGACACCAAAGGACCCAGGAGCGTACGTTGAAGGCACTTGCTGAAAAGAATGAGAGGGACCTTCAAGCCCAAAGAGACCAAGTGGAGAGAACTAGGATTGCTGAAACACTAGATGTTGAGATCAAGCGTTGGGCTGCAGGGAAAGAGGGGAACTTGCGTGCTTTGCTATCAACCATGCAATATGTGCTCTGGCCTGAGTGTGGTTGGCAGCCAATTTCTTTAACGGATATGATTACTGCTGCCTCAGTTAAGAAAGTATATAGGAAGGCAACTTTGTGCATTCATCCTGATAAGGTACAACAGAAGGGTGCGAATCTTCAACAGAAGTATATAGCCGAGAAAGTGTTCGATCTTCTTAAGGAAGCTTGGAACAAGTTCAATTCGGAGGAGCTTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0009504 GO:0016020 GO:0016192 GO:0031982 GO:0043226 GO:0043227 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0071944 GO:0072583 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

972

Amino Acids

106.59

Weight (kDa)

6.09

Isoelectric Point (pI)

45.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12770 AT4G12770 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G36520
fragaria_vesca	FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040
malus_domestica	MD00G1181300.v1.1 MD15G1135900.v1.1
prunus_persica	Prupe.4G277600_v2.0.a1 Prupe.4G277600_v2.0.a1
pyrus_communis	pycom15g12250 pycom520g00360
rosa_chinensis	RchiOBHm_Chr2g0122701
rosa_laevigata	RLG00000018706
rosa_multiflora	Rmu_sc0008259.1_g000015 Rmu_sc0017734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00121300
rosa_rugosa	Rorug02G0241600 Rorug02G0241700
rosa_samantha	Rh2AG299900 Rh2BG308000 Rh2CG286200 Rh2CG286700 Rh2DG324000
rosa_wichuraiana	Rw2G023840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	467
AccB7I	CCANNNNNTGG	1 cut(s)	2456
AccI	GTMKAC	1 cut(s)	775
AccII	CGCG	5 cut(s)	147, 186, 247, 273, 2208
AciI	CCGC	9 cut(s)	237, 247, 271, 273, 284, 470, 519, 627, 1169
AclWI	GGATC	9 cut(s)	127, 195, 208, 574, 719, 842, 1231, 2318, 2331
AcoI	YGGCCR	1 cut(s)	1851
AcsI	RAATTY	5 cut(s)	106, 349, 1525, 1574, 2398
AcuI	CTGAAG	6 cut(s)	434, 1209, 1989, 2172, 2370, 2511
AcyI	GRCGYC	1 cut(s)	464
AfaI	GTAC	7 cut(s)	440, 1164, 1465, 1612, 2298, 2542, 2814
AfiI	CCNNNNNNNGG	7 cut(s)	165, 277, 479, 620, 857, 2456, 2717
AflII	CTTAAG	1 cut(s)	2873
AhlI	ACTAGT	1 cut(s)	1259
AjnI	CCWGG	5 cut(s)	613, 1457, 2469, 2507, 2532
AjuI	GAANNNNNNNTTGG	2 cut(s)	58, 90
Alw21I	GWGCWC	5 cut(s)	422, 1267, 2011, 2268, 2706
Alw26I	GTCTC	6 cut(s)	23, 1125, 1182, 1544, 2480, 2586
AlwI	GGATC	9 cut(s)	127, 195, 208, 574, 719, 842, 1231, 2318, 2331
AlwNI	CAGNNNCTG	1 cut(s)	1535
Ama87I	CYCGRG	1 cut(s)	2022
ApaI	GGGCCC	1 cut(s)	360
ApoI	RAATTY	5 cut(s)	106, 349, 1525, 1574, 2398
ArsI	GACNNNNNNTTYG	4 cut(s)	326, 358, 377, 409
Asp700I	GAANNNNTTC	4 cut(s)	8, 1324, 2861, 2891
AspA2I	CCTAGG	1 cut(s)	2306
AspLEI	GCGC	2 cut(s)	149, 247
AspS9I	GGNCC	9 cut(s)	61, 129, 356, 357, 669, 1027, 1399, 2529, 2575
AsuC2I	CCSGG	2 cut(s)	408, 594
AsuHPI	GGTGA	4 cut(s)	472, 1436, 1520, 1724
AsuII	TTCGAA	1 cut(s)	782
AsuNHI	GCTAGC	1 cut(s)	2288
AvaI	CYCGRG	1 cut(s)	2022
AvaII	GGWCC	3 cut(s)	129, 2529, 2575
AvrII	CCTAGG	1 cut(s)	2306
AxyI	CCTNAGG	1 cut(s)	1149
BaeGI	GKGCMC	2 cut(s)	360, 594
BalI	TGGCCA	1 cut(s)	1853
BamHI	GGATCC	2 cut(s)	200, 2323
BanII	GRGCYC	3 cut(s)	360, 540, 2011
BauI	CACGAG	1 cut(s)	1887
Bbv12I	GWGCWC	5 cut(s)	422, 1267, 2011, 2268, 2706
BbvCI	CCTCAGC	1 cut(s)	1566
BccI	CCATC	4 cut(s)	712, 851, 1636, 2458
BceAI	ACGGC	3 cut(s)	438, 457, 967
BcgI	CGANNNNNNTGC	2 cut(s)	2198, 2232
BciT130I	CCWGG	5 cut(s)	615, 1459, 2471, 2509, 2534
BcnI	CCSGG	2 cut(s)	408, 594
BcoDI	GTCTC	6 cut(s)	23, 1125, 1182, 1544, 2480, 2586
BcuI	ACTAGT	1 cut(s)	1259
BfrI	CTTAAG	1 cut(s)	2873
BglII	AGATCT	2 cut(s)	1184, 1943
BlnI	CCTAGG	1 cut(s)	2306
Bme1390I	CCNGG	7 cut(s)	408, 594, 615, 1459, 2471, 2509, 2534
Bme18I	GGWCC	3 cut(s)	129, 2529, 2575
BmeT110I	CYCGRG	1 cut(s)	2022
BmgT120I	GGNCC	9 cut(s)	61, 129, 356, 357, 669, 1027, 1399, 2529, 2575
BmrFI	CCNGG	7 cut(s)	408, 594, 615, 1459, 2471, 2509, 2534
BmrI	ACTGGG	2 cut(s)	135, 834
BmsI	GCATC	2 cut(s)	271, 2372
BmtI	GCTAGC	1 cut(s)	2292
BmuI	ACTGGG	2 cut(s)	135, 834
BpmI	CTGGAG	3 cut(s)	544, 2166, 2478
Bpu10I	CCTNAGC	2 cut(s)	553, 1566
Bpu14I	TTCGAA	1 cut(s)	782
BpuEI	CTTGAG	2 cut(s)	1466, 2282
BpuMI	CCSGG	2 cut(s)	408, 594
BsaBI	GATNNNNATC	3 cut(s)	846, 1053, 2256
BsaHI	GRCGYC	1 cut(s)	464
BsaI	GGTCTC	3 cut(s)	23, 1182, 2586
BsaJI	CCNNGG	9 cut(s)	271, 407, 614, 759, 862, 1458, 2306, 2357, 2532
BsaWI	WCCGGW	1 cut(s)	254
BsaXI	ACNNNNNCTCC	4 cut(s)	1249, 1279, 2528, 2558
Bsc4I	CCNNNNNNNGG	7 cut(s)	165, 277, 479, 620, 857, 2456, 2717
Bse1I	ACTGG	6 cut(s)	130, 495, 663, 829, 970, 1298
Bse21I	CCTNAGG	1 cut(s)	1149
Bse8I	GATNNNNATC	3 cut(s)	846, 1053, 2256
BseBI	CCWGG	5 cut(s)	615, 1459, 2471, 2509, 2534
BseDI	CCNNGG	9 cut(s)	271, 407, 614, 759, 862, 1458, 2306, 2357, 2532
BseGI	GGATG	3 cut(s)	286, 1657, 2800
BseJI	GATNNNNATC	3 cut(s)	846, 1053, 2256
BseLI	CCNNNNNNNGG	7 cut(s)	165, 277, 479, 620, 857, 2456, 2717
BseMII	CTCAG	6 cut(s)	567, 669, 1265, 1557, 2703, 2775
BseNI	ACTGG	6 cut(s)	130, 495, 663, 829, 970, 1298
BseRI	GAGGAG	3 cut(s)	1275, 1278, 2475
BseSI	GKGCMC	2 cut(s)	360, 594
Bsh1236I	CGCG	5 cut(s)	147, 186, 247, 273, 2208
Bsh1285I	CGRYCG	1 cut(s)	184
BsiEI	CGRYCG	1 cut(s)	184
BsiHKAI	GWGCWC	5 cut(s)	422, 1267, 2011, 2268, 2706
BsiHKCI	CYCGRG	1 cut(s)	2022
BsiSI	CCGG	4 cut(s)	51, 255, 407, 594
BsiWI	CGTACG	1 cut(s)	2540
BslFI	GGGAC	3 cut(s)	142, 860, 2588
BslI	CCNNNNNNNGG	7 cut(s)	165, 277, 479, 620, 857, 2456, 2717
BsmAI	GTCTC	6 cut(s)	23, 1125, 1182, 1544, 2480, 2586
BsmFI	GGGAC	3 cut(s)	142, 860, 2588
BsmI	GAATGC	1 cut(s)	2796
Bso31I	GGTCTC	3 cut(s)	23, 1182, 2586
BsoBI	CYCGRG	1 cut(s)	2022
Bsp119I	TTCGAA	1 cut(s)	782
Bsp120I	GGGCCC	1 cut(s)	356
Bsp1286I	GDGCHC	8 cut(s)	360, 422, 540, 594, 1267, 2011, 2268, 2706
Bsp1407I	TGTACA	1 cut(s)	1162
Bsp68I	TCGCGA	2 cut(s)	186, 2208
BspACI	CCGC	9 cut(s)	237, 247, 271, 273, 284, 470, 519, 627, 1169
BspCNI	CTCAG	6 cut(s)	566, 668, 1264, 1558, 2704, 2774
BspFNI	CGCG	5 cut(s)	147, 186, 247, 273, 2208
BspMAI	CTGCAG	9 cut(s)	1411, 1704, 2038, 2074, 2137, 2182, 2200, 2227, 2656
BspOI	GCTAGC	1 cut(s)	2292
BspPI	GGATC	9 cut(s)	127, 195, 208, 574, 719, 842, 1231, 2318, 2331
BspQI	GCTCTTC	2 cut(s)	410, 2497
BspT104I	TTCGAA	1 cut(s)	782
BspTI	CTTAAG	1 cut(s)	2873
BspTNI	GGTCTC	3 cut(s)	23, 1182, 2586
BsrGI	TGTACA	1 cut(s)	1162
BsrI	ACTGG	6 cut(s)	130, 495, 663, 829, 970, 1298
BssECI	CCNNGG	9 cut(s)	271, 407, 614, 759, 862, 1458, 2306, 2357, 2532
BssNI	GRCGYC	1 cut(s)	464
BssSI	CACGAG	1 cut(s)	1887
BssT1I	CCWWGG	4 cut(s)	759, 862, 2306, 2357
Bst2BI	CACGAG	1 cut(s)	1887
Bst2UI	CCWGG	5 cut(s)	615, 1459, 2471, 2509, 2534
Bst4CI	ACNGT	5 cut(s)	982, 1081, 1228, 1275, 1377
Bst6I	CTCTTC	4 cut(s)	410, 1710, 1770, 2497
BstACI	GRCGYC	1 cut(s)	464
BstAFI	CTTAAG	1 cut(s)	2873
BstAPI	GCANNNNNTGC	1 cut(s)	2701
BstAUI	TGTACA	1 cut(s)	1162
BstBI	TTCGAA	1 cut(s)	782
BstC8I	GCNNGC	8 cut(s)	145, 590, 831, 1912, 2206, 2286, 2290, 2676
BstDEI	CTNAG	8 cut(s)	220, 553, 655, 1149, 1251, 1566, 2712, 2761
BstDSI	CCRYGG	1 cut(s)	271
BstF5I	GGATG	3 cut(s)	286, 1657, 2800
BstFNI	CGCG	5 cut(s)	147, 186, 247, 273, 2208
BstHHI	GCGC	2 cut(s)	149, 247
BstMAI	GTCTC	6 cut(s)	23, 1125, 1182, 1544, 2480, 2586
BstMCI	CGRYCG	1 cut(s)	184
BstNI	CCWGG	5 cut(s)	615, 1459, 2471, 2509, 2534
BstNSI	RCATGY	1 cut(s)	1586
BstSCI	CCNGG	7 cut(s)	406, 592, 613, 1457, 2469, 2507, 2532
BstSLI	GKGCMC	2 cut(s)	360, 594
BstUI	CGCG	5 cut(s)	147, 186, 247, 273, 2208
BstX2I	RGATCY	7 cut(s)	119, 200, 724, 1184, 1236, 1943, 2323
BstXI	CCANNNNNNTGG	1 cut(s)	718
BstYI	RGATCY	7 cut(s)	119, 200, 724, 1184, 1236, 1943, 2323
Bsu36I	CCTNAGG	1 cut(s)	1149
BtgI	CCRYGG	1 cut(s)	271
BtsCI	GGATG	3 cut(s)	286, 1657, 2800
BtsI	GCAGTG	1 cut(s)	2299
BtsIMutI	CAGTG	4 cut(s)	502, 1224, 1305, 2299
BtuMI	TCGCGA	2 cut(s)	186, 2208
Cac8I	GCNNGC	8 cut(s)	145, 590, 831, 1912, 2206, 2286, 2290, 2676
CaiI	CAGNNNCTG	1 cut(s)	1535
CfoI	GCGC	2 cut(s)	149, 247
Cfr13I	GGNCC	9 cut(s)	61, 129, 356, 357, 669, 1027, 1399, 2529, 2575
Cfr42I	CCGCGG	1 cut(s)	274
Csp6I	GTAC	7 cut(s)	439, 1163, 1464, 1611, 2297, 2541, 2813
CspCI	CAANNNNNGTGG	2 cut(s)	2395, 2430
CviAII	CATG	7 cut(s)	674, 1198, 1543, 1583, 1915, 2278, 2692
CviQI	GTAC	7 cut(s)	439, 1163, 1464, 1611, 2297, 2541, 2813
DdeI	CTNAG	8 cut(s)	220, 553, 655, 1149, 1251, 1566, 2712, 2761
EaeI	YGGCCR	1 cut(s)	1851
Eam1104I	CTCTTC	4 cut(s)	410, 1710, 1770, 2497
EarI	CTCTTC	4 cut(s)	410, 1710, 1770, 2497
Ecl136II	GAGCTC	1 cut(s)	2009
Eco130I	CCWWGG	4 cut(s)	759, 862, 2306, 2357
Eco24I	GRGCYC	3 cut(s)	360, 540, 2011
Eco31I	GGTCTC	3 cut(s)	23, 1182, 2586
Eco32I	GATATC	1 cut(s)	229
Eco47I	GGWCC	3 cut(s)	129, 2529, 2575
Eco53kI	GAGCTC	1 cut(s)	2009
Eco57I	CTGAAG	6 cut(s)	434, 1209, 1989, 2172, 2370, 2511
Eco81I	CCTNAGG	1 cut(s)	1149
Eco88I	CYCGRG	1 cut(s)	2022
EcoICRI	GAGCTC	1 cut(s)	2009
EcoO109I	RGGNCCY	5 cut(s)	129, 356, 1027, 2529, 2575
EcoRI	GAATTC	2 cut(s)	349, 1525
EcoRII	CCWGG	5 cut(s)	613, 1457, 2469, 2507, 2532
EcoRV	GATATC	1 cut(s)	229
EcoT14I	CCWWGG	4 cut(s)	759, 862, 2306, 2357
EcoT38I	GRGCYC	3 cut(s)	360, 540, 2011
ErhI	CCWWGG	4 cut(s)	759, 862, 2306, 2357
FaeI	CATG	7 cut(s)	677, 1201, 1546, 1586, 1918, 2281, 2695
FaqI	GGGAC	3 cut(s)	142, 860, 2588
FatI	CATG	7 cut(s)	673, 1197, 1542, 1582, 1914, 2277, 2691
FauI	CCCGC	2 cut(s)	230, 512
FblI	GTMKAC	1 cut(s)	775
FokI	GGATG	3 cut(s)	293, 1664, 2787
FriOI	GRGCYC	3 cut(s)	360, 540, 2011
GlaI	GCGC	2 cut(s)	148, 246
GsuI	CTGGAG	3 cut(s)	544, 2166, 2478
HapII	CCGG	4 cut(s)	51, 255, 407, 594
HhaI	GCGC	2 cut(s)	149, 247
Hin1I	GRCGYC	1 cut(s)	464
Hin1II	CATG	7 cut(s)	677, 1201, 1546, 1586, 1918, 2281, 2695
Hin6I	GCGC	2 cut(s)	147, 245
HinP1I	GCGC	2 cut(s)	147, 245
HincII	GTYRAC	1 cut(s)	651
HindII	GTYRAC	1 cut(s)	651
HindIII	AAGCTT	1 cut(s)	2880
HpaII	CCGG	4 cut(s)	51, 255, 407, 594
HphI	GGTGA	4 cut(s)	472, 1436, 1520, 1724
Hpy166II	GTNNAC	7 cut(s)	345, 364, 379, 651, 776, 2236, 2297
Hpy8I	GTNNAC	7 cut(s)	345, 364, 379, 651, 776, 2236, 2297
Hpy99I	CGWCG	5 cut(s)	182, 386, 389, 460, 469
HpyCH4III	ACNGT	5 cut(s)	982, 1081, 1228, 1275, 1377
HpyCH4IV	ACGT	4 cut(s)	464, 1696, 2173, 2543
HpyF3I	CTNAG	8 cut(s)	220, 553, 655, 1149, 1251, 1566, 2712, 2761
HpySE526I	ACGT	4 cut(s)	464, 1696, 2173, 2543
Hsp92I	GRCGYC	1 cut(s)	464
Hsp92II	CATG	7 cut(s)	677, 1201, 1546, 1586, 1918, 2281, 2695
HspAI	GCGC	2 cut(s)	147, 245
KspI	CCGCGG	1 cut(s)	274
LguI	GCTCTTC	2 cut(s)	410, 2497
LmnI	GCTCC	7 cut(s)	563, 640, 1270, 1393, 2147, 2536, 2905
LweI	GCATC	2 cut(s)	271, 2372
MaeII	ACGT	4 cut(s)	464, 1696, 2173, 2543
MaeIII	GTNAC	3 cut(s)	460, 752, 1424
MfeI	CAATTG	2 cut(s)	542, 1434
MflI	RGATCY	7 cut(s)	119, 200, 724, 1184, 1236, 1943, 2323
MhlI	GDGCHC	8 cut(s)	360, 422, 540, 594, 1267, 2011, 2268, 2706
MlsI	TGGCCA	1 cut(s)	1853
MluNI	TGGCCA	1 cut(s)	1853
MlyI	GAGTC	2 cut(s)	1243, 1421
MmeI	TCCRAC	1 cut(s)	2493
Mox20I	TGGCCA	1 cut(s)	1853
MroXI	GAANNNNTTC	4 cut(s)	8, 1324, 2861, 2891
MscI	TGGCCA	1 cut(s)	1853
MseI	TTAA	4 cut(s)	435, 2738, 2766, 2874
MslI	CAYNNNNRTG	1 cut(s)	1494
Msp20I	TGGCCA	1 cut(s)	1853
MspA1I	CMGCKG	1 cut(s)	273
MspCI	CTTAAG	1 cut(s)	2873
MspI	CCGG	4 cut(s)	51, 255, 407, 594
MspR9I	CCNGG	7 cut(s)	408, 594, 615, 1459, 2471, 2509, 2534
MunI	CAATTG	2 cut(s)	542, 1434
Mva1269I	GAATGC	1 cut(s)	2796
MvaI	CCWGG	5 cut(s)	615, 1459, 2471, 2509, 2534
MvnI	CGCG	5 cut(s)	147, 186, 247, 273, 2208
NciI	CCSGG	2 cut(s)	408, 594
NheI	GCTAGC	1 cut(s)	2288
NlaIII	CATG	7 cut(s)	677, 1201, 1546, 1586, 1918, 2281, 2695
NmeAIII	GCCGAG	2 cut(s)	559, 2878
NmuCI	GTSAC	3 cut(s)	460, 752, 1424
NruI	TCGCGA	2 cut(s)	186, 2208
NspI	RCATGY	1 cut(s)	1586
NspV	TTCGAA	1 cut(s)	782
PaeR7I	CTCGAG	1 cut(s)	2022
PciSI	GCTCTTC	2 cut(s)	410, 2497
PcsI	WCGNNNNNNNCGW	4 cut(s)	372, 393, 461, 470
PctI	GAATGC	1 cut(s)	2796
PdmI	GAANNNNTTC	4 cut(s)	8, 1324, 2861, 2891
Pfl23II	CGTACG	1 cut(s)	2540
PflMI	CCANNNNNTGG	1 cut(s)	2456
PfoI	TCCNGGA	1 cut(s)	2469
Ple19I	CGATCG	1 cut(s)	184
PleI	GAGTC	2 cut(s)	1243, 1421
PpsI	GAGTC	2 cut(s)	1243, 1421
PpuMI	RGGWCCY	3 cut(s)	129, 2529, 2575
Psp124BI	GAGCTC	1 cut(s)	2011
Psp5II	RGGWCCY	3 cut(s)	129, 2529, 2575
Psp6I	CCWGG	5 cut(s)	613, 1457, 2469, 2507, 2532
PspGI	CCWGG	5 cut(s)	613, 1457, 2469, 2507, 2532
PspLI	CGTACG	1 cut(s)	2540
PspOMI	GGGCCC	1 cut(s)	356
PspPI	GGNCC	9 cut(s)	61, 129, 356, 357, 669, 1027, 1399, 2529, 2575
PspPPI	RGGWCCY	3 cut(s)	129, 2529, 2575
PstI	CTGCAG	9 cut(s)	1411, 1704, 2038, 2074, 2137, 2182, 2200, 2227, 2656
PstNI	CAGNNNCTG	1 cut(s)	1535
PsuI	RGATCY	7 cut(s)	119, 200, 724, 1184, 1236, 1943, 2323
PvuI	CGATCG	1 cut(s)	184
RruI	TCGCGA	2 cut(s)	186, 2208
RsaI	GTAC	7 cut(s)	440, 1164, 1465, 1612, 2298, 2542, 2814
RsaNI	GTAC	7 cut(s)	439, 1163, 1464, 1611, 2297, 2541, 2813
RseI	CAYNNNNRTG	1 cut(s)	1494
SacI	GAGCTC	1 cut(s)	2011
SacII	CCGCGG	1 cut(s)	274
SapI	GCTCTTC	2 cut(s)	410, 2497
SaqAI	TTAA	4 cut(s)	435, 2738, 2766, 2874
Sau96I	GGNCC	9 cut(s)	61, 129, 356, 357, 669, 1027, 1399, 2529, 2575
SchI	GAGTC	2 cut(s)	1243, 1421
ScrFI	CCNGG	7 cut(s)	408, 594, 615, 1459, 2471, 2509, 2534
SduI	GDGCHC	8 cut(s)	360, 422, 540, 594, 1267, 2011, 2268, 2706
SfaNI	GCATC	2 cut(s)	271, 2372
Sfr274I	CTCGAG	1 cut(s)	2022
Sfr303I	CCGCGG	1 cut(s)	274
SfuI	TTCGAA	1 cut(s)	782
SgrBI	CCGCGG	1 cut(s)	274
SinI	GGWCC	3 cut(s)	129, 2529, 2575
SlaI	CTCGAG	1 cut(s)	2022
SmiMI	CAYNNNNRTG	1 cut(s)	1494
SmlI	CTYRAG	4 cut(s)	1445, 2022, 2261, 2873
SmoI	CTYRAG	4 cut(s)	1445, 2022, 2261, 2873
SpeI	ACTAGT	1 cut(s)	1259
SsiI	CCGC	9 cut(s)	237, 247, 271, 273, 284, 470, 519, 627, 1169
SspI	AATATT	1 cut(s)	2413
SstI	GAGCTC	1 cut(s)	2011
StyD4I	CCNGG	7 cut(s)	406, 592, 613, 1457, 2469, 2507, 2532
StyI	CCWWGG	4 cut(s)	759, 862, 2306, 2357
TaaI	ACNGT	5 cut(s)	982, 1081, 1228, 1275, 1377
TaiI	ACGT	4 cut(s)	467, 1699, 2176, 2546
TatI	WGTACW	2 cut(s)	1162, 1610
TauI	GCSGC	4 cut(s)	273, 276, 287, 472
Tru1I	TTAA	4 cut(s)	435, 2738, 2766, 2874
Tru9I	TTAA	4 cut(s)	435, 2738, 2766, 2874
TscAI	CASTG	4 cut(s)	502, 1231, 1305, 2299
TseFI	GTSAC	3 cut(s)	460, 752, 1424
Tsp45I	GTSAC	3 cut(s)	460, 752, 1424
TspGWI	ACGGA	1 cut(s)	2756
TspRI	CASTG	4 cut(s)	502, 1231, 1305, 2299
Van91I	CCANNNNNTGG	1 cut(s)	2456
Vha464I	CTTAAG	1 cut(s)	2873
VpaK11BI	GGWCC	3 cut(s)	129, 2529, 2575
XapI	RAATTY	5 cut(s)	106, 349, 1525, 1574, 2398
XceI	RCATGY	1 cut(s)	1586
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1861
XhoI	CTCGAG	1 cut(s)	2022
XmaJI	CCTAGG	1 cut(s)	2306
XmiI	GTMKAC	1 cut(s)	775
XmnI	GAANNNNTTC	4 cut(s)	8, 1324, 2861, 2891
ZraI	GACGTC	1 cut(s)	465

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.