pycom15g12250

DnaJ molecular chaperone homology domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
8347153 .. 8351314
4162 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g12250.2

Sequence Viewer

Length: 1833 bp
ATGTCTCCACCTTCCTATGTAAATGCTAGTCCTAAGGAAACAAATTTACAAGTGGATAGGTCTCCAAGATCTGAAGAAAACATGGATTCATTGGATAATGTATGGCTCACTGTATCAGAATGCAGATCGATCCCTCTAATGACTCAGCCCACTAGTGCTCCACCACCGTCAAGACCTCCTCCTCCAAGACCAGTGCAAATTTCAAAGGCAAGAATGGGTTCCCCTGCTTCCACAAATGCAAGAAAGAAGGCTACTGAATCTTCTACACAGTTCTTTCAAGCTCCTAAGTCAGCCCCTGCTGCAGCGAGAGGCTTGGGTGACTCTCCAATTGATGAACTGGAGGATTTTGCCAGGGGTAAGAACCAAACTAACTTTTCTGAACACGCTAATGGCCCTGCTGGTGAAGAATTGGAGATGAATTCAGTTGCTGCTGCCATGAAAGAGGCTATGGATAGAGCTGAGGCTAAATTCAGACATGCGAAGGAAGTGAGAGAGAGGGGAAGTACAAAGGCTGCTAGAAGTAAAGAAGCACAGATGGAAAAGGATGAGAAAGTTATGCAAGAAAAACAGGAGAGGTTTGACAGCGAACGTCTGCAGAGGGAAGGTGAAGAGGAAGATATGGAACAGAGTAGAGTGGAGAAAGAGAAGGAAATTGAGAGGGCGTGGGAAGAGAAAGAGAGAGAACAAAGGAGGCTTGAAAAGGAAAGGGAGAGAACCAGAGAAATGGAGAGGGAAAGGGGTATGGCCAGACAAGCTGTGGAAAGGGCTACTAGGGAAGCACGAGAGAGAGCAGCTAATGAAGCTCGCATGAAAGCTGAAAGGGCTAAAGCAGAGAGAGCTGCTGTAGACAAGGCAACTGCTGAAGCTAGAGAACGGGCTGAAAGGGCTGCTGTTCAGAGAGCTCAAAGTGAAGCTCGAGAAAGAGCTGCAGCAGAGGCAAAGGAAAGAGCAGAAAAGGCTGCTGCAGAAGCCAGAGAAAGAGCAAATGCAGAAGCAAAGGAGAGGGAAGCAAAAGAAAGAGCTGCTGCAGCTAGGGCTGGAGCTGAAGCACGAACTAGAGCTGAACGTGCTGCAGTAGAAAGGGCTGCTGCAGAGGCTCGAGAAAGGGCTGCTGCAGAGGCTCGCGAAAGAGCTGCTGCTGCAGCAAGGGCGAACCAGCAAAGGAGTGATAATGATCTCGAGCACTTTTTCAGCATGGGGCGAGCTAGCAGTGCACCACGACCTAGGGCTAACTCATCGGATCCATTTCAGAATAGGCAAGAACCTGAAGTGCCAAAGGCATCAACCACTACTTCCTCAAACATAAGGAAAGCAAATTCAACCACAAATATTGTTGATGATCTTTCAGCAATTTTTGGAGGTGCTCCATCTTCTGGAGGAGAGTTCCAGGAAGTTGAAGGAGAGACTGAAGAAAGGCGAAGAGCCAGGTTGGAACGACACCAAAGGACCCAGGAGCGTACGTTGAAAGCACTTGCTGAAAAGAATGAGAGGGACCTTCAAGCCCAAAGAGACCAAGCGGAGAGAACTAGGATTGCTGAAACACTAGATGTTGAGATCAAGCGTTGGGCTGCAGGGAAAGAGGGGAACTTGCGTGCTTTGCTATCGACCATGCAATATGTGCTCTGGCCTGAGTGTGGTTGGCAGCCAGTTTCTTTAACGGATATGATTACTGCTGCCTCAGTTAAGAAAGTATATAGGAAGGCAACTTTGTGCATTCATCCTGATAAGGTACAACAGAAGGGTGCGAATCTTCAACAGAAGTATATAGCCGAGAAAGTGTTTGATCTTCTTAAGGAAGCTTGGAACAAGTTTAATTCGGAGGAGCTTTTTTGA

Protein Analysis

611

Amino Acids

68.69

Weight (kDa)

8.83

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1373
AccI GTMKAC 1 cut(s) 846
AccII CGCG 1 cut(s) 1125
AciI CCGC 1 cut(s) 1517
AclWI GGATC 3 cut(s) 124, 1235, 1248
AcoI YGGCCR 1 cut(s) 744
AcsI RAATTY 5 cut(s) 43, 198, 418, 467, 1315
AcuI CTGAAG 5 cut(s) 93, 882, 1065, 1287, 1428
AfaI GTAC 3 cut(s) 505, 1459, 1731
AfiI CCNNNNNNNGG 2 cut(s) 1373, 1634
AflII CTTAAG 1 cut(s) 1790
AgsI TTSAA 8 cut(s) 204, 278, 698, 1320, 1397, 1465, 1499, 1754
AhlI ACTAGT 1 cut(s) 152
AjnI CCWGG 4 cut(s) 350, 1386, 1424, 1449
Alw21I GWGCWC 6 cut(s) 160, 904, 1185, 1216, 1366, 1623
Alw26I GTCTC 4 cut(s) 9, 66, 1397, 1503
Alw44I GTGCAC 1 cut(s) 1212
AlwI GGATC 3 cut(s) 124, 1235, 1248
AlwNI CAGNNNCTG 2 cut(s) 296, 428
Ama87I CYCGRG 3 cut(s) 915, 1098, 1178
AoxI GGCC 3 cut(s) 391, 744, 1625
ApaLI GTGCAC 1 cut(s) 1212
ApoI RAATTY 5 cut(s) 43, 198, 418, 467, 1315
Asp700I GAANNNNTTC 1 cut(s) 217
AspA2I CCTAGG 1 cut(s) 1223
AspS9I GGNCC 3 cut(s) 392, 1446, 1492
AsuHPI GGTGA 3 cut(s) 329, 413, 617
AsuNHI GCTAGC 1 cut(s) 1205
AvaI CYCGRG 3 cut(s) 915, 1098, 1178
AvaII GGWCC 2 cut(s) 1446, 1492
AvrII CCTAGG 1 cut(s) 1223
AxyI CCTNAGG 1 cut(s) 33
BaeGI GKGCMC 1 cut(s) 1216
BalI TGGCCA 1 cut(s) 746
BamHI GGATCC 1 cut(s) 1240
BanII GRGCYC 1 cut(s) 904
BauI CACGAG 1 cut(s) 780
Bbv12I GWGCWC 6 cut(s) 160, 904, 1185, 1216, 1366, 1623
BbvCI CCTCAGC 1 cut(s) 459
BccI CCATC 2 cut(s) 529, 1375
BcgI CGANNNNNNTGC 2 cut(s) 1115, 1149
BciT130I CCWGG 4 cut(s) 352, 1388, 1426, 1451
BcoDI GTCTC 4 cut(s) 9, 66, 1397, 1503
BcuI ACTAGT 1 cut(s) 152
BfrI CTTAAG 1 cut(s) 1790
BglII AGATCT 1 cut(s) 68
BlnI CCTAGG 1 cut(s) 1223
Bme1390I CCNGG 4 cut(s) 352, 1388, 1426, 1451
Bme18I GGWCC 2 cut(s) 1446, 1492
BmeT110I CYCGRG 3 cut(s) 915, 1098, 1178
BmgT120I GGNCC 3 cut(s) 392, 1446, 1492
BmiI GGNNCC 4 cut(s) 220, 1242, 1448, 1493
BmrFI CCNGG 4 cut(s) 352, 1388, 1426, 1451
BmsI GCATC 1 cut(s) 1289
BmtI GCTAGC 1 cut(s) 1209
BpmI CTGGAG 3 cut(s) 359, 1059, 1395
Bpu10I CCTNAGC 1 cut(s) 459
Bsa29I ATCGAT 1 cut(s) 128
BsaBI GATNNNNATC 1 cut(s) 1173
BsaI GGTCTC 2 cut(s) 66, 1503
BsaJI CCNNGG 3 cut(s) 351, 1223, 1449
BsaXI ACNNNNNCTCC 4 cut(s) 142, 172, 1445, 1475
Bsc4I CCNNNNNNNGG 2 cut(s) 1373, 1634
Bse1I ACTGG 3 cut(s) 191, 342, 1646
Bse21I CCTNAGG 1 cut(s) 33
Bse8I GATNNNNATC 1 cut(s) 1173
BseBI CCWGG 4 cut(s) 352, 1388, 1426, 1451
BseCI ATCGAT 1 cut(s) 128
BseDI CCNNGG 3 cut(s) 351, 1223, 1449
BseGI GGATG 2 cut(s) 550, 1717
BseJI GATNNNNATC 1 cut(s) 1173
BseLI CCNNNNNNNGG 2 cut(s) 1373, 1634
BseMII CTCAG 4 cut(s) 158, 450, 1620, 1692
BseNI ACTGG 3 cut(s) 191, 342, 1646
BseRI GAGGAG 3 cut(s) 168, 171, 1392
BseSI GKGCMC 1 cut(s) 1216
Bsh1236I CGCG 1 cut(s) 1125
BshFI GGCC 3 cut(s) 393, 746, 1627
BshVI ATCGAT 1 cut(s) 128
BsiHKAI GWGCWC 6 cut(s) 160, 904, 1185, 1216, 1366, 1623
BsiHKCI CYCGRG 3 cut(s) 915, 1098, 1178
BsiWI CGTACG 1 cut(s) 1457
BslFI GGGAC 1 cut(s) 1505
BslI CCNNNNNNNGG 2 cut(s) 1373, 1634
BsmAI GTCTC 4 cut(s) 9, 66, 1397, 1503
BsmFI GGGAC 1 cut(s) 1505
BsmI GAATGC 2 cut(s) 125, 1713
BsnI GGCC 3 cut(s) 393, 746, 1627
Bso31I GGTCTC 2 cut(s) 66, 1503
BsoBI CYCGRG 3 cut(s) 915, 1098, 1178
Bsp1286I GDGCHC 6 cut(s) 160, 904, 1185, 1216, 1366, 1623
Bsp143I GATC 8 cut(s) 68, 125, 129, 1174, 1240, 1339, 1554, 1783
Bsp68I TCGCGA 1 cut(s) 1125
BspACI CCGC 1 cut(s) 1517
BspANI GGCC 3 cut(s) 393, 746, 1627
BspCNI CTCAG 4 cut(s) 157, 451, 1621, 1691
BspDI ATCGAT 1 cut(s) 128
BspFNI CGCG 1 cut(s) 1125
BspLI GGNNCC 4 cut(s) 220, 1242, 1448, 1493
BspOI GCTAGC 1 cut(s) 1209
BspPI GGATC 3 cut(s) 124, 1235, 1248
BspQI GCTCTTC 1 cut(s) 1414
BspTI CTTAAG 1 cut(s) 1790
BspTNI GGTCTC 2 cut(s) 66, 1503
BsrI ACTGG 3 cut(s) 191, 342, 1646
BssECI CCNNGG 3 cut(s) 351, 1223, 1449
BssMI GATC 8 cut(s) 68, 125, 129, 1174, 1240, 1339, 1554, 1783
BssSI CACGAG 1 cut(s) 780
BssT1I CCWWGG 1 cut(s) 1223
Bst2BI CACGAG 1 cut(s) 780
Bst2UI CCWGG 4 cut(s) 352, 1388, 1426, 1451
Bst4CI ACNGT 3 cut(s) 112, 168, 270
Bst6I CTCTTC 3 cut(s) 603, 663, 1414
BstAFI CTTAAG 1 cut(s) 1790
BstAPI GCANNNNNTGC 1 cut(s) 1618
BstC8I GCNNGC 5 cut(s) 805, 1123, 1203, 1207, 1593
BstDEI CTNAG 6 cut(s) 33, 144, 285, 459, 1629, 1678
BstF5I GGATG 2 cut(s) 550, 1717
BstFNI CGCG 1 cut(s) 1125
BstKTI GATC 8 cut(s) 71, 128, 132, 1177, 1243, 1342, 1557, 1786
BstMAI GTCTC 4 cut(s) 9, 66, 1397, 1503
BstMBI GATC 8 cut(s) 68, 125, 129, 1174, 1240, 1339, 1554, 1783
BstNI CCWGG 4 cut(s) 352, 1388, 1426, 1451
BstNSI RCATGY 1 cut(s) 479
BstSCI CCNGG 4 cut(s) 350, 1386, 1424, 1449
BstSLI GKGCMC 1 cut(s) 1216
BstUI CGCG 1 cut(s) 1125
BstX2I RGATCY 2 cut(s) 68, 1240
BstXI CCANNNNNNTGG 1 cut(s) 724
BstYI RGATCY 2 cut(s) 68, 1240
Bsu15I ATCGAT 1 cut(s) 128
Bsu36I CCTNAGG 1 cut(s) 33
BsuRI GGCC 3 cut(s) 393, 746, 1627
BsuTUI ATCGAT 1 cut(s) 128
BtsCI GGATG 2 cut(s) 550, 1717
BtsI GCAGTG 1 cut(s) 1216
BtsIMutI CAGTG 3 cut(s) 108, 198, 1216
BtuMI TCGCGA 1 cut(s) 1125
Cac8I GCNNGC 5 cut(s) 805, 1123, 1203, 1207, 1593
CaiI CAGNNNCTG 2 cut(s) 296, 428
Cfr13I GGNCC 3 cut(s) 392, 1446, 1492
ClaI ATCGAT 1 cut(s) 128
Csp6I GTAC 3 cut(s) 504, 1458, 1730
CspCI CAANNNNNGTGG 2 cut(s) 1312, 1347
CviAII CATG 6 cut(s) 82, 436, 476, 808, 1195, 1609
CviQI GTAC 3 cut(s) 504, 1458, 1730
DdeI CTNAG 6 cut(s) 33, 144, 285, 459, 1629, 1678
DpnI GATC 8 cut(s) 70, 127, 131, 1176, 1242, 1341, 1556, 1785
DpnII GATC 8 cut(s) 68, 125, 129, 1174, 1240, 1339, 1554, 1783
EaeI YGGCCR 1 cut(s) 744
Eam1104I CTCTTC 3 cut(s) 603, 663, 1414
EarI CTCTTC 3 cut(s) 603, 663, 1414
Ecl136II GAGCTC 1 cut(s) 902
Eco130I CCWWGG 1 cut(s) 1223
Eco24I GRGCYC 1 cut(s) 904
Eco31I GGTCTC 2 cut(s) 66, 1503
Eco47I GGWCC 2 cut(s) 1446, 1492
Eco53kI GAGCTC 1 cut(s) 902
Eco57I CTGAAG 5 cut(s) 93, 882, 1065, 1287, 1428
Eco81I CCTNAGG 1 cut(s) 33
Eco88I CYCGRG 3 cut(s) 915, 1098, 1178
EcoICRI GAGCTC 1 cut(s) 902
EcoO109I RGGNCCY 2 cut(s) 1446, 1492
EcoRI GAATTC 1 cut(s) 418
EcoRII CCWGG 4 cut(s) 350, 1386, 1424, 1449
EcoT14I CCWWGG 1 cut(s) 1223
EcoT38I GRGCYC 1 cut(s) 904
ErhI CCWWGG 1 cut(s) 1223
FaeI CATG 6 cut(s) 85, 439, 479, 811, 1198, 1612
FaqI GGGAC 1 cut(s) 1505
FatI CATG 6 cut(s) 81, 435, 475, 807, 1194, 1608
FblI GTMKAC 1 cut(s) 846
FokI GGATG 2 cut(s) 557, 1704
FriOI GRGCYC 1 cut(s) 904
GsuI CTGGAG 3 cut(s) 359, 1059, 1395
HaeIII GGCC 3 cut(s) 393, 746, 1627
Hin1II CATG 6 cut(s) 85, 439, 479, 811, 1198, 1612
HindIII AAGCTT 1 cut(s) 1797
HinfI GANTC 5 cut(s) 86, 142, 257, 320, 1747
HphI GGTGA 3 cut(s) 329, 413, 617
Hpy166II GTNNAC 2 cut(s) 847, 1214
Hpy188I TCNGA 8 cut(s) 73, 118, 379, 473, 897, 1240, 1251, 1819
Hpy188III TCNNGA 7 cut(s) 171, 917, 1100, 1124, 1178, 1374, 1721
Hpy8I GTNNAC 2 cut(s) 847, 1214
HpyAV CCTTC 9 cut(s) 21, 241, 475, 596, 640, 1391, 1505, 1693, 1732
HpyCH4III ACNGT 3 cut(s) 112, 168, 270
HpyCH4IV ACGT 3 cut(s) 589, 1066, 1460
HpyF3I CTNAG 6 cut(s) 33, 144, 285, 459, 1629, 1678
HpySE526I ACGT 3 cut(s) 589, 1066, 1460
Hsp92II CATG 6 cut(s) 85, 439, 479, 811, 1198, 1612
Kzo9I GATC 8 cut(s) 68, 125, 129, 1174, 1240, 1339, 1554, 1783
LguI GCTCTTC 1 cut(s) 1414
LmnI GCTCC 6 cut(s) 163, 286, 1040, 1369, 1453, 1822
LweI GCATC 1 cut(s) 1289
MaeII ACGT 3 cut(s) 589, 1066, 1460
MaeIII GTNAC 1 cut(s) 317
MalI GATC 8 cut(s) 70, 127, 131, 1176, 1242, 1341, 1556, 1785
MboI GATC 8 cut(s) 68, 125, 129, 1174, 1240, 1339, 1554, 1783
MfeI CAATTG 1 cut(s) 327
MflI RGATCY 2 cut(s) 68, 1240
MhlI GDGCHC 6 cut(s) 160, 904, 1185, 1216, 1366, 1623
MlsI TGGCCA 1 cut(s) 746
MluNI TGGCCA 1 cut(s) 746
MlyI GAGTC 2 cut(s) 136, 314
MmeI TCCRAC 1 cut(s) 1410
Mox20I TGGCCA 1 cut(s) 746
MroXI GAANNNNTTC 1 cut(s) 217
MscI TGGCCA 1 cut(s) 746
MseI TTAA 4 cut(s) 1655, 1683, 1791, 1812
MslI CAYNNNNRTG 1 cut(s) 387
Msp20I TGGCCA 1 cut(s) 746
MspCI CTTAAG 1 cut(s) 1790
MspR9I CCNGG 4 cut(s) 352, 1388, 1426, 1451
MunI CAATTG 1 cut(s) 327
Mva1269I GAATGC 2 cut(s) 125, 1713
MvaI CCWGG 4 cut(s) 352, 1388, 1426, 1451
MvnI CGCG 1 cut(s) 1125
NdeII GATC 8 cut(s) 68, 125, 129, 1174, 1240, 1339, 1554, 1783
NheI GCTAGC 1 cut(s) 1205
NlaIII CATG 6 cut(s) 85, 439, 479, 811, 1198, 1612
NlaIV GGNNCC 4 cut(s) 220, 1242, 1448, 1493
NmeAIII GCCGAG 1 cut(s) 1795
NmuCI GTSAC 1 cut(s) 317
NruI TCGCGA 1 cut(s) 1125
NspI RCATGY 1 cut(s) 479
PaeR7I CTCGAG 3 cut(s) 915, 1098, 1178
PciSI GCTCTTC 1 cut(s) 1414
PctI GAATGC 2 cut(s) 125, 1713
PdmI GAANNNNTTC 1 cut(s) 217
PfeI GAWTC 3 cut(s) 86, 257, 1747
Pfl23II CGTACG 1 cut(s) 1457
PflMI CCANNNNNTGG 1 cut(s) 1373
PfoI TCCNGGA 1 cut(s) 1386
PleI GAGTC 2 cut(s) 136, 314
PpsI GAGTC 2 cut(s) 136, 314
PpuMI RGGWCCY 2 cut(s) 1446, 1492
Psp124BI GAGCTC 1 cut(s) 904
Psp5II RGGWCCY 2 cut(s) 1446, 1492
Psp6I CCWGG 4 cut(s) 350, 1386, 1424, 1449
PspGI CCWGG 4 cut(s) 350, 1386, 1424, 1449
PspLI CGTACG 1 cut(s) 1457
PspN4I GGNNCC 4 cut(s) 220, 1242, 1448, 1493
PspPI GGNCC 3 cut(s) 392, 1446, 1492
PspPPI RGGWCCY 2 cut(s) 1446, 1492
PstNI CAGNNNCTG 2 cut(s) 296, 428
PsuI RGATCY 2 cut(s) 68, 1240
RruI TCGCGA 1 cut(s) 1125
RsaI GTAC 3 cut(s) 505, 1459, 1731
RsaNI GTAC 3 cut(s) 504, 1458, 1730
RseI CAYNNNNRTG 1 cut(s) 387
SacI GAGCTC 1 cut(s) 904
SapI GCTCTTC 1 cut(s) 1414
SaqAI TTAA 4 cut(s) 1655, 1683, 1791, 1812
Sau3AI GATC 8 cut(s) 68, 125, 129, 1174, 1240, 1339, 1554, 1783
Sau96I GGNCC 3 cut(s) 392, 1446, 1492
SchI GAGTC 2 cut(s) 136, 314
ScrFI CCNGG 4 cut(s) 352, 1388, 1426, 1451
SduI GDGCHC 6 cut(s) 160, 904, 1185, 1216, 1366, 1623
SfaNI GCATC 1 cut(s) 1289
Sfr274I CTCGAG 3 cut(s) 915, 1098, 1178
SinI GGWCC 2 cut(s) 1446, 1492
SlaI CTCGAG 3 cut(s) 915, 1098, 1178
SmiMI CAYNNNNRTG 1 cut(s) 387
SmlI CTYRAG 4 cut(s) 915, 1098, 1178, 1790
SmoI CTYRAG 4 cut(s) 915, 1098, 1178, 1790
SpeI ACTAGT 1 cut(s) 152
SsiI CCGC 1 cut(s) 1517
SspI AATATT 1 cut(s) 1330
SstI GAGCTC 1 cut(s) 904
StyD4I CCNGG 4 cut(s) 350, 1386, 1424, 1449
StyI CCWWGG 1 cut(s) 1223
TaaI ACNGT 3 cut(s) 112, 168, 270
TaiI ACGT 3 cut(s) 592, 1069, 1463
TaqI TCGA 5 cut(s) 128, 916, 1099, 1179, 1604
TatI WGTACW 1 cut(s) 503
TfiI GAWTC 3 cut(s) 86, 257, 1747
Tru1I TTAA 4 cut(s) 1655, 1683, 1791, 1812
Tru9I TTAA 4 cut(s) 1655, 1683, 1791, 1812
TscAI CASTG 3 cut(s) 115, 198, 1216
TseFI GTSAC 1 cut(s) 317
Tsp45I GTSAC 1 cut(s) 317
TspDTI ATGAA 7 cut(s) 78, 348, 431, 452, 813, 824, 1706
TspGWI ACGGA 1 cut(s) 1673
TspRI CASTG 3 cut(s) 115, 198, 1216
Van91I CCANNNNNTGG 1 cut(s) 1373
Vha464I CTTAAG 1 cut(s) 1790
VneI GTGCAC 1 cut(s) 1212
VpaK11BI GGWCC 2 cut(s) 1446, 1492
XapI RAATTY 5 cut(s) 43, 198, 418, 467, 1315
XceI RCATGY 1 cut(s) 479
XcmI CCANNNNNNNNNTGG 1 cut(s) 754
XhoI CTCGAG 3 cut(s) 915, 1098, 1178
XmaJI CCTAGG 1 cut(s) 1223
XmiI GTMKAC 1 cut(s) 846
XmnI GAANNNNTTC 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.