Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004006

Physical Location & Seq

Genomic Coordinates Forward (+)

34196735 .. 34203254

Gene Structure 6520 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018706

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2871 bp

ATGAACGACTTCTCGAGTCTCTTAAACTCCGATTACGGCTTCAAGCCCTCCGGCAAATCGGCCCCAATGTCTTCTTCTTCTTCTTCTTCTTCTTCAAAGCCCCCAGCTTTCGATCTCGGATCCACCGGACCCTCCTCCAGATCAACTCGCACCTCCAATTCCTTCAACGGGTCCTTCTCCGACGATCGCGACCCGATCTTCGGAGCCCCGAAAGCCCAAGACTTTGAGAACATCTTCGGCGGCTCGGCCAGGTTCTCCACCAATTCCGAAGCTTTCAACTTGGATTCCATCTACGGCGGTGGGCCCGCTGATTCCGGCCCCTCCAAGGTCGCCGATTCCGGCCCCGTTTTCGACAAGCCGGTTTACGACGAGGACATTTTCGACGGCGTTGCGGGGCTGAAGAGCTCAGCCGCGAACGACATTTTCTCCTCGACGGTGACGTCGCCGCGGCCGCCGCCTCGGGGCAGTGATAGTAGTGCGTTTGATGACCTTCTCGGTGGGTTTGGCAAGGCTGAGCCGGCGGCGGCGTCGTCAAAAAGCTCTAGCTCACAGAAAGCTGACGTGGGTGTGCCGCCGGGTTTCGATGAATTGTTACCTGGATTTGGAGCTAGTAGCAGCCCCCAAACTGAAAGGTCAAACTCAGAAGCCAACTGGCCCCCAGAGACAACTGCCAATGTGAGTAAAACAACAACTTCCAAGGGGATTGACAATCCTTTTGGAGTAGCAGGGCAGTTTAATGACCCCTTGGAGGAAATAAGTAGACTTTCTAATTCTGGAAGCTTGAAGGCTGATAACCCGTCTGTTGATAACGGGCGAGCATTTGATGATATAGATCCCTTTGATGGCCTTGGGCAGTCGGTCCCTGCATTTTCTTCAGGGAGGAGTTTCAGGGGAAAGGATAGTGGTAATTTAAAGGCAGATACAAGCACAAATAATGGCAGAGGTTCAACTGGTAAAGAATCAACTAAGTCTTCTGTGAGAAGTCCAGATAACCAGTCTCAGAGGAAGGTTCCTGTTGGAAATCATTGGGATCCTCATCAGACCTTTTTTGACATGCCTTCAGTTTCGACTGATTCTCACAAATCTGCAGGTCAAACTATTTCTCCACCTTCATATGTAAATGCCAAGGAAGCAAATGTACCGGTGGATAGGTCTTCAAGATCTGAAGAAAACTTGGATTCATCAGATAATGTATGGCTTACTGTATCAGAGATCCCTCTAATGACTCAGCCTACTAGTGCTCCACCACCTTCAAGACCACCTCCTCCAAGACCTGTGCAGGTTTCAAAGTCAAGAATGAGTTCTCCTGCTTCTACAAATTCAAGAAAGAAGGCTAGTGAATCCTCTACTGAGTTCTTTCAGGCTCCAAAAGCAACCTCTGCTGCAGCTAGGAGCTCTGGTGTTTCTTCAGTTGACGAACTTGGCGATTTTGGCATGGGAAAGAGCCAAAGTAACTTTGATGAACATGCAAATGGTCTTTCGAATGAAGAATTCATGGAGGTTCTGGATAGAGCTGAGTTTCAAATGAGGCAGGCAAAAGAGAGAGGAAGTACAAAGTCTGCGAGAAGTAAAGAAGCACAGGAGAAGGAAAAAGAACGGCTGCAGAGGGAGAGCGAAGAGGAAGATATGGAACAGAGGAGACTGGAGAAAGAGAGGGAAACTGAGAGGGTGTCGGAAGACAAAGAAAGAGAGCAAAGGAAACTTGAGAAGGAAAGGGAGAGAGCCAGGGAGATGGAGAAGAACAGACAAGCCGTGGAAAGGGCTACTAGGGAAGCACGTGAGAGAGCGGCAGCTGAAGCTCGCATAAAGGCTGAAAGGGCTAAAACAGAGAGAGCTGCTGTTGACAGGGCAAATGCTGAAGCTAGAGTACGTGCTGAAAGGGCTGCAGTTCAGAGAGCTCAATCTGAAGCTCGGGAAAGGGCTGCAGCAGAAGCAAAGTTAAGAGCAGAAAAAGCTGCTGCAGAAGCCAGAGAAAGAGCTAATGCAGAAGCTAAGGAGAGGGAAGCAAGGGAGAGAACTGCTGCAGAAGCCAGAGAAAGAGCTAATGCAGAAGCTAAGGAGAGGGAAGCAAGGGAGAGAACTGCTGCAGCAAGGTCTGAAGCTGAAGCACGAACAAGATCGGAGCGTGCTGCGGTGGAAAGGGCTGCTGCAGAGGCCCGAGAAAGGGCTAATGCTGCTGCGAGGGTGAACCAACAAAGGAATGAAAATGATCTTGAGAACTTTTTCAACATGGGTCGGGCTAGCAGTGCGCCACGACCCAGGGCTAACTCATCGGATCCTTTTGATGCCCATTTTCAGAAAAGGCAAGAGCCTGAAGTGCCGAAGACATCAACTTCCTCAAACATAAAGAAAGCGTCTTCAACCACAAATATTGTTGATGATCTTTCATCAATTTTTGGAGCTGCTCCATCATCTAATGAGTTCCAAGAAGTTGAAGGAGAAACTGAAGAAAGGCGAAGAGCCAGGTTGGAACGACACCAAAGGACCAAGGAGCGTACGGTGAAAGCACTAGCTGAAAAGAACGAGCGAGACCTTCAAGCCCAAAGAGAACAAGCTGAGAGACATAGAATTGCTGAAACACTAGATGTTGAGATTAAGCGCTGGGCTGCAGGAAAAGAGGGAAATTTACGTGCTCTGCTGTCAACTTTGCAATATGTACTGTGGCCTGAATGTGGTTGGCAGCCTGTGTCCTTGACTGATATGATTAATGCTGCCCAAGTGAAGAAAGTATATAGGAAGGCAACTTTGTGTATTCATCCTGATAAGGTACAACAGAAAGGTGCCAGTCTTCAACAGAAGTACGTAGCTGAGAAGGTGTTCGACCTCCTTAAGGAAGCTTGGAACAAGTTCAATTCAGAGGAGCTATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0009504 GO:0016020 GO:0016192 GO:0031982 GO:0043226 GO:0043227 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0071944 GO:0072583 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

957

Amino Acids

104.77

Weight (kDa)

6.2

Isoelectric Point (pI)

51.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12770 AT4G12770 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G36520
fragaria_vesca	FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040
malus_domestica	MD00G1181300.v1.1 MD15G1135900.v1.1
prunus_persica	Prupe.4G277600_v2.0.a1 Prupe.4G277600_v2.0.a1
pyrus_communis	pycom15g12250 pycom520g00360
rosa_chinensis	RchiOBHm_Chr2g0122701
rosa_laevigata	RLG00000018706
rosa_multiflora	Rmu_sc0008259.1_g000015 Rmu_sc0017734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00121300
rosa_rugosa	Rorug02G0241600 Rorug02G0241700
rosa_samantha	Rh2AG299900 Rh2BG308000 Rh2CG286200 Rh2CG286700 Rh2DG324000
rosa_wichuraiana	Rw2G023840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	439
AatII	GACGTC	1 cut(s)	443
Acc36I	ACCTGC	2 cut(s)	1079, 1270
AccB1I	GGYRCC	1 cut(s)	2780
AccBSI	CCGCTC	1 cut(s)	1787
AccI	GTMKAC	1 cut(s)	760
AccII	CGCG	3 cut(s)	189, 413, 448
AclWI	GGATC	8 cut(s)	114, 127, 827, 1025, 1038, 1207, 2270, 2283
AcoI	YGGCCR	2 cut(s)	246, 449
AcsI	RAATTY	3 cut(s)	1318, 1490, 2623
AcvI	CACGTG	1 cut(s)	1778
AcyI	GRCGYC	2 cut(s)	440, 527
AfaI	GTAC	7 cut(s)	1140, 1552, 1869, 2497, 2658, 2769, 2801
AfeI	AGCGCT	1 cut(s)	2600
AflII	CTTAAG	1 cut(s)	2828
AgeI	ACCGGT	1 cut(s)	1141
AhlI	ACTAGT	1 cut(s)	1235
AjiI	CACGTC	1 cut(s)	562
AjnI	CCWGG	5 cut(s)	248, 595, 1724, 2258, 2462
AjuI	GAANNNNNNNTTGG	2 cut(s)	58, 90
Alw21I	GWGCWC	5 cut(s)	407, 1243, 1397, 1900, 2635
Alw26I	GTCTC	6 cut(s)	23, 656, 1002, 1633, 2523, 2554
AlwI	GGATC	8 cut(s)	114, 127, 827, 1025, 1038, 1207, 2270, 2283
Ama87I	CYCGRG	4 cut(s)	13, 459, 1911, 2157
Aor51HI	AGCGCT	1 cut(s)	2600
ApaI	GGGCCC	1 cut(s)	306
ApoI	RAATTY	3 cut(s)	1318, 1490, 2623
ArsI	GACNNNNNNTTYG	4 cut(s)	182, 214, 698, 730
AseI	ATTAAT	1 cut(s)	2706
AsiGI	ACCGGT	1 cut(s)	1141
Asp700I	GAANNNNTTC	6 cut(s)	8, 233, 1300, 2222, 2816, 2846
AspLEI	GCGC	2 cut(s)	2251, 2601
AsuC2I	CCSGG	1 cut(s)	576
AsuHPI	GGTGA	3 cut(s)	448, 2197, 2512
AsuII	TTCGAA	1 cut(s)	1481
AsuNHI	GCTAGC	1 cut(s)	2240
AvaI	CYCGRG	4 cut(s)	13, 459, 1911, 2157
AvaII	GGWCC	4 cut(s)	128, 171, 859, 2484
BaeGI	GKGCMC	1 cut(s)	306
BamHI	GGATCC	3 cut(s)	119, 1030, 2275
BanI	GGYRCC	1 cut(s)	2780
BanII	GRGCYC	5 cut(s)	208, 306, 407, 1397, 1900
BarI	GAAGNNNNNNTAC	4 cut(s)	1122, 1154, 1851, 1883
BbrPI	CACGTG	1 cut(s)	1778
BbsI	GAAGAC	7 cut(s)	63, 963, 1146, 1683, 2330, 2349, 2780
Bbv12I	GWGCWC	5 cut(s)	407, 1243, 1397, 1900, 2635
BccI	CCATC	4 cut(s)	296, 836, 1726, 2416
BceAI	ACGGC	5 cut(s)	52, 310, 400, 1613, 1736
BcgI	CGANNNNNNTGC	2 cut(s)	371, 405
BciT130I	CCWGG	5 cut(s)	250, 597, 1726, 2260, 2464
BcnI	CCSGG	1 cut(s)	576
BcoDI	GTCTC	6 cut(s)	23, 656, 1002, 1633, 2523, 2554
BcuI	ACTAGT	1 cut(s)	1235
BfoI	RGCGCY	1 cut(s)	2602
BfrI	CTTAAG	1 cut(s)	2828
BfuAI	ACCTGC	2 cut(s)	1079, 1270
BglII	AGATCT	1 cut(s)	1160
BlpI	GCTNAGC	2 cut(s)	406, 513
Bme1390I	CCNGG	6 cut(s)	250, 576, 597, 1726, 2260, 2464
Bme18I	GGWCC	4 cut(s)	128, 171, 859, 2484
BmeT110I	CYCGRG	4 cut(s)	13, 459, 1911, 2157
BmgBI	CACGTC	1 cut(s)	562
BmrFI	CCNGG	6 cut(s)	250, 576, 597, 1726, 2260, 2464
BmsI	GCATC	1 cut(s)	2275
BmtI	GCTAGC	1 cut(s)	2244
BpiI	GAAGAC	7 cut(s)	63, 963, 1146, 1683, 2330, 2349, 2780
BpmI	CTGGAG	2 cut(s)	121, 1664
Bpu10I	CCTNAGC	2 cut(s)	1992, 2055
Bpu1102I	GCTNAGC	2 cut(s)	406, 513
Bpu14I	TTCGAA	1 cut(s)	1481
BpuEI	CTTGAG	2 cut(s)	1724, 2234
BpuMI	CCSGG	1 cut(s)	576
BsaAI	YACGTR	4 cut(s)	1778, 1871, 2630, 2803
BsaBI	GATNNNNATC	2 cut(s)	831, 1035
BsaHI	GRCGYC	2 cut(s)	440, 527
BsaI	GGTCTC	1 cut(s)	2523
BsaWI	WCCGGW	2 cut(s)	125, 1141
BsaXI	ACNNNNNCTCC	8 cut(s)	410, 440, 1087, 1117, 1225, 1255, 1384, 1414
Bse118I	RCCGGY	3 cut(s)	358, 517, 1141
Bse1I	ACTGG	5 cut(s)	656, 955, 994, 1647, 2784
Bse8I	GATNNNNATC	2 cut(s)	831, 1035
BseBI	CCWGG	5 cut(s)	250, 597, 1726, 2260, 2464
BseGI	GGATG	1 cut(s)	2755
BseJI	GATNNNNATC	2 cut(s)	831, 1035
BseNI	ACTGG	5 cut(s)	656, 955, 994, 1647, 2784
BseRI	GAGGAG	5 cut(s)	124, 418, 895, 1254, 1651
BseSI	GKGCMC	1 cut(s)	306
BseX3I	CGGCCG	1 cut(s)	449
BseYI	CCCAGC	2 cut(s)	103, 2601
BsgI	GTGCAG	1 cut(s)	1298
Bsh1236I	CGCG	3 cut(s)	189, 413, 448
Bsh1285I	CGRYCG	2 cut(s)	187, 452
BshNI	GGYRCC	1 cut(s)	2780
BshTI	ACCGGT	1 cut(s)	1141
BsiEI	CGRYCG	2 cut(s)	187, 452
BsiHKAI	GWGCWC	5 cut(s)	407, 1243, 1397, 1900, 2635
BsiHKCI	CYCGRG	4 cut(s)	13, 459, 1911, 2157
BsiSI	CCGG	8 cut(s)	51, 126, 315, 339, 359, 518, 575, 1142
BsiWI	CGTACG	1 cut(s)	2495
BslFI	GGGAC	1 cut(s)	845
BsmAI	GTCTC	6 cut(s)	23, 656, 1002, 1633, 2523, 2554
BsmFI	GGGAC	1 cut(s)	845
Bso31I	GGTCTC	1 cut(s)	2523
BsoBI	CYCGRG	4 cut(s)	13, 459, 1911, 2157
Bsp119I	TTCGAA	1 cut(s)	1481
Bsp120I	GGGCCC	1 cut(s)	302
Bsp1286I	GDGCHC	7 cut(s)	208, 306, 407, 1243, 1397, 1900, 2635
Bsp1720I	GCTNAGC	2 cut(s)	406, 513
Bsp68I	TCGCGA	1 cut(s)	189
BspFNI	CGCG	3 cut(s)	189, 413, 448
BspMI	ACCTGC	2 cut(s)	1079, 1270
BspOI	GCTAGC	1 cut(s)	2244
BspPI	GGATC	8 cut(s)	114, 127, 827, 1025, 1038, 1207, 2270, 2283
BspQI	GCTCTTC	2 cut(s)	395, 2452
BspT104I	TTCGAA	1 cut(s)	1481
BspT107I	GGYRCC	1 cut(s)	2780
BspTI	CTTAAG	1 cut(s)	2828
BspTNI	GGTCTC	1 cut(s)	2523
BsrBI	CCGCTC	1 cut(s)	1787
BsrFI	RCCGGY	3 cut(s)	358, 517, 1141
BsrI	ACTGG	5 cut(s)	656, 955, 994, 1647, 2784
BssAI	RCCGGY	3 cut(s)	358, 517, 1141
BssNI	GRCGYC	2 cut(s)	440, 527
BssT1I	CCWWGG	6 cut(s)	324, 696, 744, 847, 1125, 2487
Bst2UI	CCWGG	5 cut(s)	250, 597, 1726, 2260, 2464
Bst4CI	ACNGT	4 cut(s)	436, 1204, 2500, 2661
Bst6I	CTCTTC	3 cut(s)	395, 1611, 2452
BstACI	GRCGYC	2 cut(s)	440, 527
BstAFI	CTTAAG	1 cut(s)	2828
BstAPI	GCANNNNNTGC	1 cut(s)	1379
BstBAI	YACGTR	4 cut(s)	1778, 1871, 2630, 2803
BstBI	TTCGAA	1 cut(s)	1481
BstC8I	GCNNGC	7 cut(s)	306, 519, 816, 1533, 1801, 2127, 2242
BstDSI	CCRYGG	2 cut(s)	446, 1752
BstENI	CCTNNNNNAGG	1 cut(s)	2828
BstF5I	GGATG	1 cut(s)	2755
BstFNI	CGCG	3 cut(s)	189, 413, 448
BstH2I	RGCGCY	1 cut(s)	2602
BstHHI	GCGC	2 cut(s)	2251, 2601
BstMAI	GTCTC	6 cut(s)	23, 656, 1002, 1633, 2523, 2554
BstMCI	CGRYCG	2 cut(s)	187, 452
BstNI	CCWGG	5 cut(s)	250, 597, 1726, 2260, 2464
BstNSI	RCATGY	2 cut(s)	1057, 1469
BstSCI	CCNGG	6 cut(s)	248, 574, 595, 1724, 2258, 2462
BstSLI	GKGCMC	1 cut(s)	306
BstSNI	TACGTA	1 cut(s)	2803
BstUI	CGCG	3 cut(s)	189, 413, 448
BstV2I	GAAGAC	7 cut(s)	63, 963, 1146, 1683, 2330, 2349, 2780
BstX2I	RGATCY	6 cut(s)	119, 832, 1030, 1160, 1212, 2275
BstXI	CCANNNNNNTGG	1 cut(s)	1732
BstYI	RGATCY	6 cut(s)	119, 832, 1030, 1160, 1212, 2275
BstZI	CGGCCG	1 cut(s)	449
BtgI	CCRYGG	2 cut(s)	446, 1752
BtrI	CACGTC	1 cut(s)	562
BtsCI	GGATG	1 cut(s)	2755
BtsI	GCAGTG	2 cut(s)	472, 2251
BtsIMutI	CAGTG	2 cut(s)	472, 2251
BtuMI	TCGCGA	1 cut(s)	189
BveI	ACCTGC	2 cut(s)	1079, 1270
Cac8I	GCNNGC	7 cut(s)	306, 519, 816, 1533, 1801, 2127, 2242
CciNI	GCGGCCGC	1 cut(s)	449
CfoI	GCGC	2 cut(s)	2251, 2601
Cfr10I	RCCGGY	3 cut(s)	358, 517, 1141
Cfr42I	CCGCGG	1 cut(s)	449
CseI	GACGC	2 cut(s)	516, 2343
Csp6I	GTAC	7 cut(s)	1139, 1551, 1868, 2496, 2657, 2768, 2800
CspAI	ACCGGT	1 cut(s)	1141
CspCI	CAANNNNNGTGG	2 cut(s)	2353, 2388
CviAII	CATG	5 cut(s)	1054, 1435, 1466, 1495, 2230
CviQI	GTAC	7 cut(s)	1139, 1551, 1868, 2496, 2657, 2768, 2800
DraI	TTTAAA	1 cut(s)	912
DrdI	GACNNNNNNGTC	1 cut(s)	439
DseDI	GACNNNNNNGTC	1 cut(s)	439
EaeI	YGGCCR	2 cut(s)	246, 449
EagI	CGGCCG	1 cut(s)	449
Eam1104I	CTCTTC	3 cut(s)	395, 1611, 2452
EarI	CTCTTC	3 cut(s)	395, 1611, 2452
Ecl136II	GAGCTC	3 cut(s)	405, 1395, 1898
EclXI	CGGCCG	1 cut(s)	449
Eco105I	TACGTA	1 cut(s)	2803
Eco130I	CCWWGG	6 cut(s)	324, 696, 744, 847, 1125, 2487
Eco24I	GRGCYC	5 cut(s)	208, 306, 407, 1397, 1900
Eco31I	GGTCTC	1 cut(s)	2523
Eco47I	GGWCC	4 cut(s)	128, 171, 859, 2484
Eco47III	AGCGCT	1 cut(s)	2600
Eco52I	CGGCCG	1 cut(s)	449
Eco53kI	GAGCTC	3 cut(s)	405, 1395, 1898
Eco72I	CACGTG	1 cut(s)	1778
Eco88I	CYCGRG	4 cut(s)	13, 459, 1911, 2157
EcoICRI	GAGCTC	3 cut(s)	405, 1395, 1898
EcoNI	CCTNNNNNAGG	1 cut(s)	2828
EcoO109I	RGGNCCY	1 cut(s)	171
EcoRI	GAATTC	1 cut(s)	1490
EcoRII	CCWGG	5 cut(s)	248, 595, 1724, 2258, 2462
EcoT14I	CCWWGG	6 cut(s)	324, 696, 744, 847, 1125, 2487
EcoT38I	GRGCYC	5 cut(s)	208, 306, 407, 1397, 1900
ErhI	CCWWGG	6 cut(s)	324, 696, 744, 847, 1125, 2487
FaeI	CATG	5 cut(s)	1057, 1438, 1469, 1498, 2233
FaqI	GGGAC	1 cut(s)	845
FatI	CATG	5 cut(s)	1053, 1434, 1465, 1494, 2229
FauI	CCCGC	2 cut(s)	313, 385
FauNDI	CATATG	1 cut(s)	1114
FblI	GTMKAC	1 cut(s)	760
FokI	GGATG	1 cut(s)	2742
FriOI	GRGCYC	5 cut(s)	208, 306, 407, 1397, 1900
GlaI	GCGC	2 cut(s)	2250, 2600
GsaI	CCCAGC	2 cut(s)	107, 2605
GsuI	CTGGAG	2 cut(s)	121, 1664
HaeII	RGCGCY	1 cut(s)	2602
HapII	CCGG	8 cut(s)	51, 126, 315, 339, 359, 518, 575, 1142
HgaI	GACGC	2 cut(s)	516, 2343
HhaI	GCGC	2 cut(s)	2251, 2601
Hin1I	GRCGYC	2 cut(s)	440, 527
Hin1II	CATG	5 cut(s)	1057, 1438, 1469, 1498, 2233
Hin6I	GCGC	2 cut(s)	2249, 2599
HinP1I	GCGC	2 cut(s)	2249, 2599
HincII	GTYRAC	3 cut(s)	1414, 1843, 2643
HindII	GTYRAC	3 cut(s)	1414, 1843, 2643
HindIII	AAGCTT	3 cut(s)	270, 778, 2835
HinfI	GANTC	9 cut(s)	16, 284, 311, 335, 959, 1073, 1178, 1225, 1340
HpaII	CCGG	8 cut(s)	51, 126, 315, 339, 359, 518, 575, 1142
HphI	GGTGA	3 cut(s)	448, 2197, 2512
Hpy166II	GTNNAC	6 cut(s)	364, 761, 1414, 1843, 2188, 2643
Hpy8I	GTNNAC	6 cut(s)	364, 761, 1414, 1843, 2188, 2643
Hpy99I	CGWCG	6 cut(s)	185, 371, 386, 436, 445, 532
HpyCH4III	ACNGT	4 cut(s)	436, 1204, 2500, 2661
HpyCH4IV	ACGT	6 cut(s)	440, 561, 1777, 1870, 2629, 2802
HpySE526I	ACGT	6 cut(s)	440, 561, 1777, 1870, 2629, 2802
Hsp92I	GRCGYC	2 cut(s)	440, 527
Hsp92II	CATG	5 cut(s)	1057, 1438, 1469, 1498, 2233
HspAI	GCGC	2 cut(s)	2249, 2599
KroI	GCCGGC	1 cut(s)	517
KroNI	GCCGGC	1 cut(s)	519
KspI	CCGCGG	1 cut(s)	449
LguI	GCTCTTC	2 cut(s)	395, 2452
LweI	GCATC	1 cut(s)	2275
MaeII	ACGT	6 cut(s)	440, 561, 1777, 1870, 2629, 2802
MaeIII	GTNAC	3 cut(s)	436, 591, 1451
MbiI	CCGCTC	1 cut(s)	1787
MflI	RGATCY	6 cut(s)	119, 832, 1030, 1160, 1212, 2275
MhlI	GDGCHC	7 cut(s)	208, 306, 407, 1243, 1397, 1900, 2635
MlyI	GAGTC	2 cut(s)	25, 1219
MmeI	TCCRAC	4 cut(s)	204, 997, 1653, 2448
MroNI	GCCGGC	1 cut(s)	517
MroXI	GAANNNNTTC	6 cut(s)	8, 233, 1300, 2222, 2816, 2846
MseI	TTAA	7 cut(s)	23, 735, 911, 1940, 2595, 2706, 2829
MslI	CAYNNNNRTG	1 cut(s)	1470
MspA1I	CMGCKG	3 cut(s)	308, 448, 1793
MspCI	CTTAAG	1 cut(s)	2828
MspI	CCGG	8 cut(s)	51, 126, 315, 339, 359, 518, 575, 1142
MspR9I	CCNGG	6 cut(s)	250, 576, 597, 1726, 2260, 2464
MvaI	CCWGG	5 cut(s)	250, 597, 1726, 2260, 2464
MvnI	CGCG	3 cut(s)	189, 413, 448
NaeI	GCCGGC	1 cut(s)	519
NciI	CCSGG	1 cut(s)	576
NdeI	CATATG	1 cut(s)	1114
NgoMIV	GCCGGC	1 cut(s)	517
NheI	GCTAGC	1 cut(s)	2240
NlaIII	CATG	5 cut(s)	1057, 1438, 1469, 1498, 2233
NmeAIII	GCCGAG	1 cut(s)	224
NmuCI	GTSAC	1 cut(s)	436
NotI	GCGGCCGC	1 cut(s)	449
NruI	TCGCGA	1 cut(s)	189
NspI	RCATGY	2 cut(s)	1057, 1469
NspV	TTCGAA	1 cut(s)	1481
PaeR7I	CTCGAG	1 cut(s)	13
PasI	CCCWGGG	1 cut(s)	2259
PciSI	GCTCTTC	2 cut(s)	395, 2452
PcsI	WCGNNNNNNNCGW	2 cut(s)	437, 1422
PdiI	GCCGGC	1 cut(s)	519
PdmI	GAANNNNTTC	6 cut(s)	8, 233, 1300, 2222, 2816, 2846
PfeI	GAWTC	7 cut(s)	284, 311, 335, 959, 1073, 1178, 1340
Pfl23II	CGTACG	1 cut(s)	2495
PinAI	ACCGGT	1 cut(s)	1141
Ple19I	CGATCG	1 cut(s)	187
PleI	GAGTC	2 cut(s)	24, 1219
PmaCI	CACGTG	1 cut(s)	1778
PmlI	CACGTG	1 cut(s)	1778
PpsI	GAGTC	2 cut(s)	24, 1219
Ppu21I	YACGTR	4 cut(s)	1778, 1871, 2630, 2803
PpuMI	RGGWCCY	1 cut(s)	171
PshBI	ATTAAT	1 cut(s)	2706
Psp124BI	GAGCTC	3 cut(s)	407, 1397, 1900
Psp5II	RGGWCCY	1 cut(s)	171
Psp6I	CCWGG	5 cut(s)	248, 595, 1724, 2258, 2462
PspCI	CACGTG	1 cut(s)	1778
PspFI	CCCAGC	2 cut(s)	103, 2601
PspGI	CCWGG	5 cut(s)	248, 595, 1724, 2258, 2462
PspLI	CGTACG	1 cut(s)	2495
PspOMI	GGGCCC	1 cut(s)	302
PspPPI	RGGWCCY	1 cut(s)	171
PsuI	RGATCY	6 cut(s)	119, 832, 1030, 1160, 1212, 2275
PvuI	CGATCG	1 cut(s)	187
PvuII	CAGCTG	1 cut(s)	1793
RruI	TCGCGA	1 cut(s)	189
RsaI	GTAC	7 cut(s)	1140, 1552, 1869, 2497, 2658, 2769, 2801
RsaNI	GTAC	7 cut(s)	1139, 1551, 1868, 2496, 2657, 2768, 2800
RseI	CAYNNNNRTG	1 cut(s)	1470
SacI	GAGCTC	3 cut(s)	407, 1397, 1900
SacII	CCGCGG	1 cut(s)	449
SapI	GCTCTTC	2 cut(s)	395, 2452
SaqAI	TTAA	7 cut(s)	23, 735, 911, 1940, 2595, 2706, 2829
SchI	GAGTC	2 cut(s)	25, 1219
ScrFI	CCNGG	6 cut(s)	250, 576, 597, 1726, 2260, 2464
SduI	GDGCHC	7 cut(s)	208, 306, 407, 1243, 1397, 1900, 2635
SfaNI	GCATC	1 cut(s)	2275
Sfr274I	CTCGAG	1 cut(s)	13
Sfr303I	CCGCGG	1 cut(s)	449
SfuI	TTCGAA	1 cut(s)	1481
SgrBI	CCGCGG	1 cut(s)	449
SinI	GGWCC	4 cut(s)	128, 171, 859, 2484
SlaI	CTCGAG	1 cut(s)	13
SmiMI	CAYNNNNRTG	1 cut(s)	1470
SmlI	CTYRAG	4 cut(s)	13, 1703, 2213, 2828
SmoI	CTYRAG	4 cut(s)	13, 1703, 2213, 2828
SnaBI	TACGTA	1 cut(s)	2803
SpeI	ACTAGT	1 cut(s)	1235
SspI	AATATT	1 cut(s)	2371
SstI	GAGCTC	3 cut(s)	407, 1397, 1900
StyD4I	CCNGG	6 cut(s)	248, 574, 595, 1724, 2258, 2462
StyI	CCWWGG	6 cut(s)	324, 696, 744, 847, 1125, 2487
TaaI	ACNGT	4 cut(s)	436, 1204, 2500, 2661
TaiI	ACGT	6 cut(s)	443, 564, 1780, 1873, 2632, 2805
TaqI	TCGA	9 cut(s)	14, 111, 351, 381, 431, 582, 1067, 1481, 2820
TaqII	GACCGA	1 cut(s)	847
TatI	WGTACW	2 cut(s)	1550, 2656
TfiI	GAWTC	7 cut(s)	284, 311, 335, 959, 1073, 1178, 1340
Tru1I	TTAA	7 cut(s)	23, 735, 911, 1940, 2595, 2706, 2829
Tru9I	TTAA	7 cut(s)	23, 735, 911, 1940, 2595, 2706, 2829
TscAI	CASTG	2 cut(s)	472, 2251
TseFI	GTSAC	1 cut(s)	436
Tsp45I	GTSAC	1 cut(s)	436
TspRI	CASTG	2 cut(s)	472, 2251
Vha464I	CTTAAG	1 cut(s)	2828
VpaK11BI	GGWCC	4 cut(s)	128, 171, 859, 2484
VspI	ATTAAT	1 cut(s)	2706
XagI	CCTNNNNNAGG	1 cut(s)	2828
XapI	RAATTY	3 cut(s)	1318, 1490, 2623
XceI	RCATGY	2 cut(s)	1057, 1469
XhoI	CTCGAG	1 cut(s)	13
XmiI	GTMKAC	1 cut(s)	760
XmnI	GAANNNNTTC	6 cut(s)	8, 233, 1300, 2222, 2816, 2846
ZraI	GACGTC	1 cut(s)	441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.