Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0017734.1

Orthogroup ID

OG0004006

Physical Location & Seq

Genomic Coordinates Forward (+)

6643 .. 15239

Gene Structure 8597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0017734.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2754 bp

atgaacgacttctcgggtctcttaaactccgattacggcttcaagccctccggcaagtcggccccaatgtcctcttcttcttcctcctcttcttcttcaaagcccccagctttcgatctcggatccaccggaccctcctccagatcaactcgcacctccaattccttctccggcgatcgcgacccgatcttcggagccccgaaagccccagactttgagaacatcttcggcggctcggccaggttctcctccaattccgaagctttcaacttggattccatctacggcgctgattccgcctcctccaaggtcgccgattccggccccgttttcgacaggccggtttacgacgacgacattttcgacggcgttgcggggctgaagagctcagccgcgaacgacattttctcctcaacggtcacgtcgccgcggccgccgccgcgggggagtgatagtagtgcgtttgatgaccttctcggtgggtttggcaaggctgagccggcggcgtcctcgtcgaaaagctctagctcacagaaagctgacgcgggtgtgccgcccggtttcgatgaattgttacctggatttggagctagtagcagcccccaaactgaaaggtcaaactcagaagccaactggcccccagagacaactgccaatgtgagtaaaacaacaacttccaaggtgattggcgatccttttggagtagcagggcagtttaatgaccccttggaggaaataagtagactttctaattctggaagcttgaaggctgataacccgtctgttgataacgggcgagcatttgatgatatagatccctttgatggccttgggaagtcggtccctgcattttcttcagggaagagtttcaggggaaaggacagtggtaatttaaaggcagatacaagcacaaataatggcagaggttcaactggtaaagaatcaactaagtcttctgtgagaagtccagataaccagtctcagaggaaggttcctgttggaaatcattgggatcctcatcagaccttttttgacatgccttcagtttcgactgattctcacaaatctgcaggtcaaactatgtctccaccttcgtatgtaaatgccaaggaagcaaatgtaccggtggataggtcttcaagatttgaagaaaacttggattcatcagataatgtatggcttacggtatcagagatccctctagtgactcagcctactagtgctccaccaccttcaagaccacctcctccaagacctgtgcaggtttcaaagccaagaatgagttctcctgcttctacaaattcaagaaagaaggctagtgaatcctctactgagttctttcaggctccaaaatcagcctccgctgcagctaggagctctggtgtttcttcagttgatgaacttggcgattttggcatgggaaagagccaaagtaactttgatgaacatgcaaatggtctttcgggtgaagaatcggagcggaactcagttactgatgctgtgaaggaggctatggaaaaagctgagtttaaaatgaggcaggcaaaagagagaggaagtacaaagtctgcgagaagtaaagaagcacaggagaaggaaaaagaacggctgcagagggagagcgaagaggaagatatggaacagaggagactggagaaagagagggaaactgagagggtgtgggaagacaaagaaagagagcaaaggaaacttgagaaggaaagggagagagccagggagatggaggagaagaacagacaagctgtggaaagagctactagggaagcacgtgagagagcggcagctgaagctcgcagtaaggctgaaagggctaaaacagagagagccgctgttgacagggcaaatgctgaagctagagcacgtgctgaaagggctgcagttcagagagctcaatctgaagctcgggaaagggctgcagcagaagcaaagttaagagcagaaaaggctgctgcagaagccagagaaagagctaatgcagaagctaaggagagggaagcaagggagagaactgctgcagcaaggtctgaagctgaagcacgaacaagatcggagcgtgctgcagtggaaagggctgctgcagaggcccgagaaagggctaatgctgctgcgagggcgagccaacaaaggaatgaaaatgatcttgagaactttttcaacatgggtcgggctagcagtgcgccacgacccagggctaactcatcggatccttttgatgcccattttcagaacaggcaacagcctgaagtgccgaagacatcaacttcctcaaacataaagaaagcgtcttcaaccacaaatattgttgatgatctttcatcaatttttggagctgctccatcatctaatgagttccaagaagttgaaggagaaactgaagaaaggcgaagagccaggttggaacgacaccaaaggaccaaggagcgtacggtgaaagcacttgctgaaaagaacgagcgagaccttcaagcccaaagagaacaagctgagagacatccttcaaatcccagaaacctcagccgcccaactcaaagatctcaactccaggagtccgaaaccggcggccccatccccagaaccggccggcaaaccaccgaaccggccaccggaagaagccaaagttcacctgaccggttcaaagctttcctcaccacctcctgcagccatactggtcaccctgcagcacctccatcccagaaacccggaaccgaaaatcctccaccggaatcggcctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0009504 GO:0016020 GO:0016192 GO:0031982 GO:0043226 GO:0043227 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0071944 GO:0072583 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

917

Amino Acids

99.4

Weight (kDa)

6.47

Isoelectric Point (pI)

56.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12770 AT4G12770 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G12780 AT4G36520
fragaria_vesca	FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040 FvH4_1g25040
malus_domestica	MD00G1181300.v1.1 MD15G1135900.v1.1
prunus_persica	Prupe.4G277600_v2.0.a1 Prupe.4G277600_v2.0.a1
pyrus_communis	pycom15g12250 pycom520g00360
rosa_chinensis	RchiOBHm_Chr2g0122701
rosa_laevigata	RLG00000018706
rosa_multiflora	Rmu_sc0008259.1_g000015 Rmu_sc0017734.1_g000005
rosa_roxburghii	Rroxscaffold_2G00121300
rosa_rugosa	Rorug02G0241600 Rorug02G0241700
rosa_samantha	Rh2AG299900 Rh2BG308000 Rh2CG286200 Rh2CG286700 Rh2DG324000
rosa_wichuraiana	Rw2G023840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1061, 1252
AccBSI	CCGCTC	2 cut(s)	1480, 1799
AccI	GTMKAC	1 cut(s)	742
AccII	CGCG	5 cut(s)	180, 395, 430, 442, 545
AclWI	GGATC	9 cut(s)	117, 130, 686, 809, 1007, 1020, 1189, 2219, 2232
AcoI	YGGCCR	4 cut(s)	237, 431, 2599, 2619
AcsI	RAATTY	1 cut(s)	1300
AcvI	CACGTG	2 cut(s)	1790, 1883
AcyI	GRCGYC	1 cut(s)	506
AfaI	GTAC	3 cut(s)	1122, 1561, 2446
AfiI	CCNNNNNNNGG	9 cut(s)	191, 443, 584, 730, 824, 2112, 2113, 2597, 2624
AgeI	ACCGGT	2 cut(s)	1123, 2649
AhlI	ACTAGT	1 cut(s)	1217
AjiI	CACGTC	1 cut(s)	423
AjnI	CCWGG	6 cut(s)	239, 577, 1733, 2207, 2411, 2562
AjuI	GAANNNNNNNTTGG	4 cut(s)	58, 90, 1267, 1299
AloI	GAACNNNNNNTCC	2 cut(s)	2716, 2748
Alw21I	GWGCWC	5 cut(s)	389, 1225, 1379, 1882, 1912
Alw26I	GTCTC	7 cut(s)	23, 638, 984, 1089, 1642, 2472, 2503
AlwI	GGATC	9 cut(s)	117, 130, 686, 809, 1007, 1020, 1189, 2219, 2232
AlwNI	CAGNNNCTG	1 cut(s)	1493
Ama87I	CYCGRG	3 cut(s)	13, 1923, 2106
ApoI	RAATTY	1 cut(s)	1300
ArsI	GACNNNNNNTTYG	4 cut(s)	173, 205, 344, 376
AsiGI	ACCGGT	2 cut(s)	1123, 2649
AsiSI	GCGATCGC	1 cut(s)	178
Asp700I	GAANNNNTTC	5 cut(s)	8, 224, 866, 1282, 2171
AspLEI	GCGC	2 cut(s)	290, 2200
AspS9I	GGNCC	8 cut(s)	61, 131, 323, 636, 841, 2104, 2433, 2582
AsuC2I	CCSGG	2 cut(s)	558, 2721
AsuHPI	GGTGA	6 cut(s)	694, 1478, 2461, 2634, 2659, 2684
AsuNHI	GCTAGC	1 cut(s)	2189
AvaI	CYCGRG	3 cut(s)	13, 1923, 2106
AvaII	GGWCC	3 cut(s)	131, 841, 2433
BamHI	GGATCC	3 cut(s)	122, 1012, 2224
BanII	GRGCYC	4 cut(s)	199, 389, 1379, 1912
BarI	GAAGNNNNNNTAC	2 cut(s)	1104, 1136
BbrPI	CACGTG	2 cut(s)	1790, 1883
BbsI	GAAGAC	5 cut(s)	945, 1128, 1692, 2279, 2298
Bbv12I	GWGCWC	5 cut(s)	389, 1225, 1379, 1882, 1912
BbvCI	CCTCAGC	1 cut(s)	2534
BccI	CCATC	6 cut(s)	287, 818, 1735, 2365, 2594, 2716
BceAI	ACGGC	4 cut(s)	52, 301, 382, 1622
BcgI	CGANNNNNNTGC	2 cut(s)	353, 387
BciT130I	CCWGG	6 cut(s)	241, 579, 1735, 2209, 2413, 2564
BcnI	CCSGG	2 cut(s)	558, 2721
BcoDI	GTCTC	7 cut(s)	23, 638, 984, 1089, 1642, 2472, 2503
BcuI	ACTAGT	1 cut(s)	1217
BfoI	RGCGCY	1 cut(s)	291
BfuAI	ACCTGC	2 cut(s)	1061, 1252
BglII	AGATCT	1 cut(s)	2552
BlpI	GCTNAGC	2 cut(s)	388, 495
Bme1390I	CCNGG	8 cut(s)	241, 558, 579, 1735, 2209, 2413, 2564, 2721
Bme18I	GGWCC	3 cut(s)	131, 841, 2433
BmeT110I	CYCGRG	3 cut(s)	13, 1923, 2106
BmgBI	CACGTC	1 cut(s)	423
BmgT120I	GGNCC	8 cut(s)	61, 131, 323, 636, 841, 2104, 2433, 2582
BmrFI	CCNGG	8 cut(s)	241, 558, 579, 1735, 2209, 2413, 2564, 2721
BmsI	GCATC	2 cut(s)	1486, 2224
BmtI	GCTAGC	1 cut(s)	2193
BpiI	GAAGAC	5 cut(s)	945, 1128, 1692, 2279, 2298
BplI	GAGNNNNNCTC	2 cut(s)	1469, 1501
BpmI	CTGGAG	3 cut(s)	124, 1673, 2546
Bpu10I	CCTNAGC	2 cut(s)	2004, 2534
Bpu1102I	GCTNAGC	2 cut(s)	388, 495
BpuEI	CTTGAG	2 cut(s)	1733, 2183
BpuMI	CCSGG	2 cut(s)	558, 2721
BsaAI	YACGTR	2 cut(s)	1790, 1883
BsaBI	GATNNNNATC	2 cut(s)	813, 1017
BsaHI	GRCGYC	1 cut(s)	506
BsaI	GGTCTC	2 cut(s)	23, 2472
BsaWI	WCCGGW	5 cut(s)	128, 1123, 2624, 2649, 2740
Bsc4I	CCNNNNNNNGG	9 cut(s)	191, 443, 584, 730, 824, 2112, 2113, 2597, 2624
Bse118I	RCCGGY	8 cut(s)	340, 499, 1123, 2576, 2597, 2601, 2617, 2649
Bse1I	ACTGG	5 cut(s)	638, 937, 976, 1656, 2692
Bse8I	GATNNNNATC	2 cut(s)	813, 1017
BseBI	CCWGG	6 cut(s)	241, 579, 1735, 2209, 2413, 2564
BseGI	GGATG	3 cut(s)	2512, 2586, 2708
BseJI	GATNNNNATC	2 cut(s)	813, 1017
BseLI	CCNNNNNNNGG	9 cut(s)	191, 443, 584, 730, 824, 2112, 2113, 2597, 2624
BseNI	ACTGG	5 cut(s)	638, 937, 976, 1656, 2692
BseRI	GAGGAG	8 cut(s)	76, 127, 238, 292, 400, 1236, 1660, 1760
BseX3I	CGGCCG	2 cut(s)	431, 2599
BseYI	CCCAGC	1 cut(s)	106
BsgI	GTGCAG	1 cut(s)	1280
Bsh1236I	CGCG	5 cut(s)	180, 395, 430, 442, 545
Bsh1285I	CGRYCG	3 cut(s)	178, 434, 2602
BshTI	ACCGGT	2 cut(s)	1123, 2649
BsiEI	CGRYCG	3 cut(s)	178, 434, 2602
BsiHKAI	GWGCWC	5 cut(s)	389, 1225, 1379, 1882, 1912
BsiHKCI	CYCGRG	3 cut(s)	13, 1923, 2106
BsiWI	CGTACG	1 cut(s)	2444
BslFI	GGGAC	1 cut(s)	827
BslI	CCNNNNNNNGG	9 cut(s)	191, 443, 584, 730, 824, 2112, 2113, 2597, 2624
BsmAI	GTCTC	7 cut(s)	23, 638, 984, 1089, 1642, 2472, 2503
BsmFI	GGGAC	1 cut(s)	827
Bso31I	GGTCTC	2 cut(s)	23, 2472
BsoBI	CYCGRG	3 cut(s)	13, 1923, 2106
Bsp1286I	GDGCHC	6 cut(s)	199, 389, 1225, 1379, 1882, 1912
Bsp1720I	GCTNAGC	2 cut(s)	388, 495
Bsp68I	TCGCGA	1 cut(s)	180
BspFNI	CGCG	5 cut(s)	180, 395, 430, 442, 545
BspMI	ACCTGC	2 cut(s)	1061, 1252
BspOI	GCTAGC	1 cut(s)	2193
BspPI	GGATC	9 cut(s)	117, 130, 686, 809, 1007, 1020, 1189, 2219, 2232
BspQI	GCTCTTC	2 cut(s)	377, 2401
BspTNI	GGTCTC	2 cut(s)	23, 2472
BsrBI	CCGCTC	2 cut(s)	1480, 1799
BsrFI	RCCGGY	8 cut(s)	340, 499, 1123, 2576, 2597, 2601, 2617, 2649
BsrI	ACTGG	5 cut(s)	638, 937, 976, 1656, 2692
BssAI	RCCGGY	8 cut(s)	340, 499, 1123, 2576, 2597, 2601, 2617, 2649
BssNI	GRCGYC	1 cut(s)	506
BssT1I	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2436
Bst2UI	CCWGG	6 cut(s)	241, 579, 1735, 2209, 2413, 2564
Bst4CI	ACNGT	4 cut(s)	418, 884, 1186, 2449
Bst6I	CTCTTC	6 cut(s)	79, 94, 377, 857, 1620, 2401
BstACI	GRCGYC	1 cut(s)	506
BstBAI	YACGTR	2 cut(s)	1790, 1883
BstC8I	GCNNGC	8 cut(s)	501, 798, 1542, 1813, 2076, 2137, 2191, 2603
BstDSI	CCRYGG	2 cut(s)	428, 440
BstEII	GGTNACC	1 cut(s)	2690
BstF5I	GGATG	3 cut(s)	2512, 2586, 2708
BstFNI	CGCG	5 cut(s)	180, 395, 430, 442, 545
BstH2I	RGCGCY	1 cut(s)	291
BstHHI	GCGC	2 cut(s)	290, 2200
BstMAI	GTCTC	7 cut(s)	23, 638, 984, 1089, 1642, 2472, 2503
BstMCI	CGRYCG	3 cut(s)	178, 434, 2602
BstNI	CCWGG	6 cut(s)	241, 579, 1735, 2209, 2413, 2564
BstNSI	RCATGY	2 cut(s)	1039, 1451
BstPI	GGTNACC	1 cut(s)	2690
BstSCI	CCNGG	8 cut(s)	239, 556, 577, 1733, 2207, 2411, 2562, 2719
BstUI	CGCG	5 cut(s)	180, 395, 430, 442, 545
BstV2I	GAAGAC	5 cut(s)	945, 1128, 1692, 2279, 2298
BstX2I	RGATCY	6 cut(s)	122, 814, 1012, 1194, 2224, 2552
BstXI	CCANNNNNNTGG	1 cut(s)	1741
BstYI	RGATCY	6 cut(s)	122, 814, 1012, 1194, 2224, 2552
BstZI	CGGCCG	2 cut(s)	431, 2599
BtgI	CCRYGG	2 cut(s)	428, 440
BtrI	CACGTC	1 cut(s)	423
BtsCI	GGATG	3 cut(s)	2512, 2586, 2708
BtsI	GCAGTG	2 cut(s)	2088, 2200
BtsIMutI	CAGTG	3 cut(s)	889, 2088, 2200
BtuMI	TCGCGA	1 cut(s)	180
BveI	ACCTGC	2 cut(s)	1061, 1252
Cac8I	GCNNGC	8 cut(s)	501, 798, 1542, 1813, 2076, 2137, 2191, 2603
CaiI	CAGNNNCTG	1 cut(s)	1493
CciNI	GCGGCCGC	1 cut(s)	431
CfoI	GCGC	2 cut(s)	290, 2200
Cfr10I	RCCGGY	8 cut(s)	340, 499, 1123, 2576, 2597, 2601, 2617, 2649
Cfr13I	GGNCC	8 cut(s)	61, 131, 323, 636, 841, 2104, 2433, 2582
Cfr42I	CCGCGG	2 cut(s)	431, 443
CseI	GACGC	3 cut(s)	495, 551, 2292
Csp6I	GTAC	3 cut(s)	1121, 1560, 2445
CspAI	ACCGGT	2 cut(s)	1123, 2649
CspCI	CAANNNNNGTGG	2 cut(s)	2302, 2337
CviAII	CATG	4 cut(s)	1036, 1417, 1448, 2179
CviQI	GTAC	3 cut(s)	1121, 1560, 2445
DraI	TTTAAA	2 cut(s)	894, 1531
EaeI	YGGCCR	4 cut(s)	237, 431, 2599, 2619
EagI	CGGCCG	2 cut(s)	431, 2599
Eam1104I	CTCTTC	6 cut(s)	79, 94, 377, 857, 1620, 2401
EarI	CTCTTC	6 cut(s)	79, 94, 377, 857, 1620, 2401
EciI	GGCGGA	1 cut(s)	286
Ecl136II	GAGCTC	3 cut(s)	387, 1377, 1910
EclXI	CGGCCG	2 cut(s)	431, 2599
Eco130I	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2436
Eco24I	GRGCYC	4 cut(s)	199, 389, 1379, 1912
Eco31I	GGTCTC	2 cut(s)	23, 2472
Eco47I	GGWCC	3 cut(s)	131, 841, 2433
Eco52I	CGGCCG	2 cut(s)	431, 2599
Eco53kI	GAGCTC	3 cut(s)	387, 1377, 1910
Eco72I	CACGTG	2 cut(s)	1790, 1883
Eco88I	CYCGRG	3 cut(s)	13, 1923, 2106
Eco91I	GGTNACC	1 cut(s)	2690
EcoICRI	GAGCTC	3 cut(s)	387, 1377, 1910
EcoO65I	GGTNACC	1 cut(s)	2690
EcoRII	CCWGG	6 cut(s)	239, 577, 1733, 2207, 2411, 2562
EcoT14I	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2436
EcoT38I	GRGCYC	4 cut(s)	199, 389, 1379, 1912
ErhI	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2436
FaeI	CATG	4 cut(s)	1039, 1420, 1451, 2182
FaqI	GGGAC	1 cut(s)	827
FatI	CATG	4 cut(s)	1035, 1416, 1447, 2178
FauI	CCCGC	3 cut(s)	367, 435, 538
FblI	GTMKAC	1 cut(s)	742
FokI	GGATG	3 cut(s)	2499, 2573, 2695
FriOI	GRGCYC	4 cut(s)	199, 389, 1379, 1912
GlaI	GCGC	2 cut(s)	289, 2199
GsaI	CCCAGC	1 cut(s)	110
GsuI	CTGGAG	3 cut(s)	124, 1673, 2546
HaeII	RGCGCY	1 cut(s)	291
HgaI	GACGC	3 cut(s)	495, 551, 2292
HhaI	GCGC	2 cut(s)	290, 2200
Hin1I	GRCGYC	1 cut(s)	506
Hin1II	CATG	4 cut(s)	1039, 1420, 1451, 2182
Hin6I	GCGC	2 cut(s)	288, 2198
HinP1I	GCGC	2 cut(s)	288, 2198
HincII	GTYRAC	1 cut(s)	1855
HindII	GTYRAC	1 cut(s)	1855
HindIII	AAGCTT	3 cut(s)	261, 760, 2658
HphI	GGTGA	6 cut(s)	694, 1478, 2461, 2634, 2659, 2684
Hpy166II	GTNNAC	4 cut(s)	346, 743, 1855, 2642
Hpy188III	TCNNGA	9 cut(s)	141, 179, 756, 968, 1140, 1236, 1305, 1925, 2162
Hpy8I	GTNNAC	4 cut(s)	346, 743, 1855, 2642
Hpy99I	CGWCG	5 cut(s)	353, 356, 368, 427, 517
HpyCH4III	ACNGT	4 cut(s)	418, 884, 1186, 2449
HpyCH4IV	ACGT	3 cut(s)	422, 1789, 1882
HpySE526I	ACGT	3 cut(s)	422, 1789, 1882
Hsp92I	GRCGYC	1 cut(s)	506
Hsp92II	CATG	4 cut(s)	1039, 1420, 1451, 2182
HspAI	GCGC	2 cut(s)	288, 2198
KroI	GCCGGC	2 cut(s)	499, 2601
KroNI	GCCGGC	2 cut(s)	501, 2603
KspI	CCGCGG	2 cut(s)	431, 443
LguI	GCTCTTC	2 cut(s)	377, 2401
LweI	GCATC	2 cut(s)	1486, 2224
MaeII	ACGT	3 cut(s)	422, 1789, 1882
MaeIII	GTNAC	6 cut(s)	418, 573, 1204, 1433, 1489, 2690
MbiI	CCGCTC	2 cut(s)	1480, 1799
MflI	RGATCY	6 cut(s)	122, 814, 1012, 1194, 2224, 2552
MhlI	GDGCHC	6 cut(s)	199, 389, 1225, 1379, 1882, 1912
MluCI	AATT	7 cut(s)	160, 253, 569, 751, 889, 1300, 2340
MlyI	GAGTC	2 cut(s)	1201, 2576
MmeI	TCCRAC	2 cut(s)	979, 2397
MroNI	GCCGGC	2 cut(s)	499, 2601
MroXI	GAANNNNTTC	5 cut(s)	8, 224, 866, 1282, 2171
MseI	TTAA	5 cut(s)	23, 717, 893, 1530, 1952
MslI	CAYNNNNRTG	1 cut(s)	1452
MspA1I	CMGCKG	5 cut(s)	430, 442, 1364, 1805, 1850
MspR9I	CCNGG	8 cut(s)	241, 558, 579, 1735, 2209, 2413, 2564, 2721
MvaI	CCWGG	6 cut(s)	241, 579, 1735, 2209, 2413, 2564
MvnI	CGCG	5 cut(s)	180, 395, 430, 442, 545
NaeI	GCCGGC	2 cut(s)	501, 2603
NciI	CCSGG	2 cut(s)	558, 2721
NgoMIV	GCCGGC	2 cut(s)	499, 2601
NheI	GCTAGC	1 cut(s)	2189
NlaIII	CATG	4 cut(s)	1039, 1420, 1451, 2182
NmeAIII	GCCGAG	1 cut(s)	215
NmuCI	GTSAC	3 cut(s)	418, 1204, 2690
NotI	GCGGCCGC	1 cut(s)	431
NruI	TCGCGA	1 cut(s)	180
NspI	RCATGY	2 cut(s)	1039, 1451
PasI	CCCWGGG	1 cut(s)	2208
PciSI	GCTCTTC	2 cut(s)	377, 2401
PcsI	WCGNNNNNNNCGW	1 cut(s)	360
PdiI	GCCGGC	2 cut(s)	501, 2603
PdmI	GAANNNNTTC	5 cut(s)	8, 224, 866, 1282, 2171
PfeI	GAWTC	9 cut(s)	275, 293, 317, 941, 1055, 1160, 1322, 1472, 2744
Pfl23II	CGTACG	1 cut(s)	2444
PfoI	TCCNGGA	1 cut(s)	2562
PinAI	ACCGGT	2 cut(s)	1123, 2649
Ple19I	CGATCG	1 cut(s)	178
PleI	GAGTC	2 cut(s)	1201, 2575
PmaCI	CACGTG	2 cut(s)	1790, 1883
PmlI	CACGTG	2 cut(s)	1790, 1883
PpsI	GAGTC	2 cut(s)	1201, 2575
Ppu21I	YACGTR	2 cut(s)	1790, 1883
Psp124BI	GAGCTC	3 cut(s)	389, 1379, 1912
Psp6I	CCWGG	6 cut(s)	239, 577, 1733, 2207, 2411, 2562
PspCI	CACGTG	2 cut(s)	1790, 1883
PspEI	GGTNACC	1 cut(s)	2690
PspFI	CCCAGC	1 cut(s)	106
PspGI	CCWGG	6 cut(s)	239, 577, 1733, 2207, 2411, 2562
PspLI	CGTACG	1 cut(s)	2444
PspPI	GGNCC	8 cut(s)	61, 131, 323, 636, 841, 2104, 2433, 2582
PstNI	CAGNNNCTG	1 cut(s)	1493
PsuI	RGATCY	6 cut(s)	122, 814, 1012, 1194, 2224, 2552
PvuI	CGATCG	1 cut(s)	178
PvuII	CAGCTG	1 cut(s)	1805
RgaI	GCGATCGC	1 cut(s)	178
RruI	TCGCGA	1 cut(s)	180
RsaI	GTAC	3 cut(s)	1122, 1561, 2446
RsaNI	GTAC	3 cut(s)	1121, 1560, 2445
RseI	CAYNNNNRTG	1 cut(s)	1452
SacI	GAGCTC	3 cut(s)	389, 1379, 1912
SacII	CCGCGG	2 cut(s)	431, 443
SapI	GCTCTTC	2 cut(s)	377, 2401
SaqAI	TTAA	5 cut(s)	23, 717, 893, 1530, 1952
Sau96I	GGNCC	8 cut(s)	61, 131, 323, 636, 841, 2104, 2433, 2582
SchI	GAGTC	2 cut(s)	1201, 2576
ScrFI	CCNGG	8 cut(s)	241, 558, 579, 1735, 2209, 2413, 2564, 2721
SduI	GDGCHC	6 cut(s)	199, 389, 1225, 1379, 1882, 1912
SfaAI	GCGATCGC	1 cut(s)	178
SfaNI	GCATC	2 cut(s)	1486, 2224
Sfr303I	CCGCGG	2 cut(s)	431, 443
SgfI	GCGATCGC	1 cut(s)	178
SgrBI	CCGCGG	2 cut(s)	431, 443
SinI	GGWCC	3 cut(s)	131, 841, 2433
SmiMI	CAYNNNNRTG	1 cut(s)	1452
SmlI	CTYRAG	2 cut(s)	1712, 2162
SmoI	CTYRAG	2 cut(s)	1712, 2162
SpeI	ACTAGT	1 cut(s)	1217
Sse9I	AATT	7 cut(s)	160, 253, 569, 751, 889, 1300, 2340
SspI	AATATT	1 cut(s)	2320
SstI	GAGCTC	3 cut(s)	389, 1379, 1912
StyD4I	CCNGG	8 cut(s)	239, 556, 577, 1733, 2207, 2411, 2562, 2719
StyI	CCWWGG	6 cut(s)	306, 678, 726, 829, 1107, 2436
TaaI	ACNGT	4 cut(s)	418, 884, 1186, 2449
TaiI	ACGT	3 cut(s)	425, 1792, 1885
TaqI	TCGA	6 cut(s)	114, 333, 363, 515, 564, 1049
TaqII	GACCGA	1 cut(s)	829
TasI	AATT	7 cut(s)	160, 253, 569, 751, 889, 1300, 2340
TatI	WGTACW	1 cut(s)	1559
TfiI	GAWTC	9 cut(s)	275, 293, 317, 941, 1055, 1160, 1322, 1472, 2744
Tru1I	TTAA	5 cut(s)	23, 717, 893, 1530, 1952
Tru9I	TTAA	5 cut(s)	23, 717, 893, 1530, 1952
TscAI	CASTG	3 cut(s)	889, 2088, 2200
TseFI	GTSAC	3 cut(s)	418, 1204, 2690
Tsp45I	GTSAC	3 cut(s)	418, 1204, 2690
TspDTI	ATGAA	7 cut(s)	17, 582, 1152, 1413, 1458, 2166, 2325
TspRI	CASTG	3 cut(s)	889, 2088, 2200
VpaK11BI	GGWCC	3 cut(s)	131, 841, 2433
XapI	RAATTY	1 cut(s)	1300
XceI	RCATGY	2 cut(s)	1039, 1451
XmiI	GTMKAC	1 cut(s)	742
XmnI	GAANNNNTTC	5 cut(s)	8, 224, 866, 1282, 2171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.