Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0007701

Physical Location & Seq

Genomic Coordinates Reverse (-)

16914394 .. 16924707

Gene Structure 10314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g25130.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGAAGGTGTCAAGACTAGCTTGGCTGCTTTCTTTGCTGCTGTGCTTTACATTGTGTTTGGGATACAATGTAAGCTACGACAGGCGCTCTTTGATTATCAATGGCCAAAGAAAGTTGCTCATTTCTGCTGCCATTCACTACCCTCGTAGTGTCCCTGCGATGTGGCCGGGGCTAGTTCAGACGGCAAAGGAAGGAGGGGTTGATGTGATTGAGACATATGTGTTTTGGAATGGTCATGAACCGTCTCCAGGCAATTATTATTTTGGAGGACGATATGATCTGGTCAAGTTTGCGAAGATCGTGGAGGATGCTGGAATGTATTTGATTCTTCGAATTGGCCCATTCGTTGCAGCAGAATGGTACTTTGGCGGGGTACCAGTGTGGTTGCATTATGTGCCTGACACTGTATTTCGAACTGATAATGAGCCCTTTAAGTATCACATGCAGAAGTTCACAACACTCATAGTTAATCTAATGAAACAAGAAAAGCTTTTTGCACCTCAAGGAGGTCCAATTATTTTGGCCCAGGCAAAAAATGAGTATGGATACTATGAAAAAGATTATGGAGAGGGAGGCAAAAAATATGCACAGTGGTCTGCTAGCATGGCTGTTGCTCAGAATATTGGTGTACCATGGATCATGTGCCAACAGTTTGATGCTCCAGAGTCTGTGATAAACACATGCAACTCCTTCTACTGTGATCAATTTACACCAATTTTTCCGAACAAACCTAAAATTTGGACAGAGAATTGGCCTGGCTGGTTTAAAACATTTGGCGCCAGAAATCCTCACAGGCCAGCTGAAGATATTGCTTTCTCTGTAGCTCGCTTTTTCCAAAAAGGTGGCAGTGTACAAAATTACTACATGTATCATGGAGGAACAAATTTTGGCCGCACTTCAGGTGGACCATTTATAACAACAAGTTATGACTATGAGGCACCAATCGATGAATATGGATTACCAAGGCTCCCAAAATGGGCACATCTTAAGCAACTTCACCTGGCAATTAAGTTATGTGAGCATATTTTGCTTAACAGTGAGCCCACTCTTGTACCGTTGGGGCCTTCCGAAGAGGCTGATGTTTTTACAAACTCTTCTGGAGCATGTGCTGCCTTCATTTCTAATATGGACGACAAAAATGACAAAACAGTTGTATTTCGTAATGTGTCATATCATCTACCTGCATGGTCAGTCAGCATACTGCCTGACTGCAAGACTGAAGTATTTAACACAGCAAAGGTAGCATCCCAAACCTCTGTAGTTGAGATGACATCTGAAACTAAAGGCTTGAAAGGGCTTAAATGGGAGGTATTTGTGGAGAAAGCTGGGATCTGGGGTGAAGCTGACTTTTTTAAATCTGGATTTGTAGATCACATCAATACCACAAGATTTACCACTGACTATCTGTGGTATACAACAAGCATATTTGTTGATGAAAATGAAGACTTCTTAAAGAAAGGAAGCTTGCCAGTTCTTCAAATTGAATCCAAAGGCCATGCTCTCCATGCTTTCGTGAACGATAAACTTCAAGATAGTGCATCTGGAAATGGCACACATCCACCCTTCAGTTTAAAAAGCCCTATCTCTCTGAAGGCAGGGAAGAATGAAATTGCTCTACTCAGCATGACAGTTGGTCTGCAGAATGCTGGATCATTTTATGAGTGGGTAGGGGCAGGAGTAACTAGTGTCAAGATTAAGGGTTTCAACAATGGTACAATTGATTTGTCTGCGCATAATTGGACCTACAAGATTGGAGTGCAAGGAGAACACCTAGGACTTTATAAGGGAGATGGCTTAAGTAATATAACTTGGATTTCAACCGCAGAACCACCAAAGGAACAACCTTTGACGTGGTATAAGGCCATTGTGGATGCTCCGCCAGGTGATGAACCTATTGGACTCGATATGATTCATATGGGAAAAGGTCTGGCTTGGTTGAATGGAGAAGAAATTGGAAGATACTGGCCTAGGAAGAGCCCTACACATGGATGCGTTCAAGAATGCAATTACAGAGGCAAATTTGATCCAGACAAATGCAATACAGGATGTGGAGAACCAACACAAAGATGGTACCATGTTCCACGGTCTTGGTTCAAGCCATCTGGAAACGTTCTGGTGATATTTGAGGAGAAAGGTGGAAATCCACTGAAAATGGAGTTTTCAAGACGGAAAATCTCAGGTGCCTGTGCTCTTGCTGCAGTAGATTACCCCTCTGTTGACCTTGAATCTTGGCGTGAGGGAAATGGAAGTAACAAAAGCATTTCAACTATCAATTTGAAGTGCCCTGAGAACACACATATATCTACTGTAAAATTTGCTAGCTTTGGAAATCCTACAGGCTCCTGTGGATCCTACACCAAAGGTGACTGCCACGATCCTAACTCCACTTCTGTGGTTGAAAAGATATGCTTACATCAAAACAATTGTGCCATAGAATTGACAGAAGAGAAATTCAGCAAGGGTTTGTGCTCGAGTGTAACGAAGAAGCTTGCAGTTGAAGTAGTGTGCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009505 GO:0009628 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

838

Amino Acids

93.35

Weight (kDa)

6.89

Isoelectric Point (pI)

35.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	30 - 334	1.3e-116	Glycosyl hydrolases family 35
GHD	PF17834	365 - 421	1.4e-24	Beta-sandwich domain in beta galactosidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63810
fragaria_vesca	FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130
malus_domestica	MD15G1136400.v1.1
prunus_persica	Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1
pyrus_communis	pycom15g12300
rosa_chinensis	RchiOBHm_Chr2g0122791
rosa_laevigata	RLG00000018715
rosa_multiflora	Rmu_sc0008528.1_g000013 Rmu_sc0037008.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121170
rosa_rugosa	Rorug02G0242600 Rorug02G0242700 Rorug02G0242700
rosa_samantha	Rh2AG301300 Rh2BG308700 Rh2CG287400 Rh2DG325500
rosa_wichuraiana	Rw2G023890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	914, 1782
Acc16I	TGCGCA	1 cut(s)	1731
Acc36I	ACCTGC	1 cut(s)	1189
Acc65I	GGTACC	2 cut(s)	373, 2070
AccB1I	GGYRCC	5 cut(s)	373, 776, 937, 2070, 2180
AccI	GTMKAC	1 cut(s)	1412
AciI	CCGC	4 cut(s)	369, 892, 1821, 1877
AclI	AACGTT	1 cut(s)	2109
AclWI	GGATC	7 cut(s)	644, 1337, 1657, 2018, 2343, 2356, 2369
AcoI	YGGCCR	3 cut(s)	103, 164, 889
AcsI	RAATTY	5 cut(s)	735, 883, 2018, 2312, 2450
AcuI	CTGAAG	5 cut(s)	822, 882, 1239, 1549, 1610
AcyI	GRCGYC	1 cut(s)	777
AfaI	GTAC	7 cut(s)	362, 375, 630, 852, 1053, 1714, 2072
AfiI	CCNNNNNNNGG	4 cut(s)	248, 506, 976, 1985
AflII	CTTAAG	2 cut(s)	986, 1795
AflIII	ACRYGT	1 cut(s)	864
AhdI	GACNNNNNGTC	1 cut(s)	1632
AhlI	ACTAGT	1 cut(s)	1682
AjiI	CACGTC	1 cut(s)	1851
AjnI	CCWGG	5 cut(s)	247, 525, 754, 999, 1879
AjuI	GAANNNNNNNTTGG	2 cut(s)	348, 380
AleI	CACNNNNGTG	1 cut(s)	2390
Alw21I	GWGCWC	2 cut(s)	2191, 2471
Alw26I	GTCTC	2 cut(s)	206, 249
AlwI	GGATC	7 cut(s)	644, 1337, 1657, 2018, 2343, 2356, 2369
AlwNI	CAGNNNCTG	1 cut(s)	668
Ama87I	CYCGRG	1 cut(s)	2470
ApeKI	GCWGC	6 cut(s)	25, 37, 128, 350, 1109, 2195
ApoI	RAATTY	5 cut(s)	735, 883, 2018, 2312, 2450
Asp718I	GGTACC	2 cut(s)	373, 2070
AspA2I	CCTAGG	2 cut(s)	1771, 1967
AspLEI	GCGC	3 cut(s)	87, 779, 1732
AspS9I	GGNCC	6 cut(s)	338, 509, 523, 905, 1061, 1740
AsuC2I	CCSGG	1 cut(s)	168
AsuHPI	GGTGA	5 cut(s)	989, 1349, 1895, 2128, 2375
AsuII	TTCGAA	2 cut(s)	331, 412
AsuNHI	GCTAGC	2 cut(s)	599, 2318
AvaI	CYCGRG	1 cut(s)	2470
AvaII	GGWCC	3 cut(s)	509, 905, 1740
AvrII	CCTAGG	2 cut(s)	1771, 1967
BaeGI	GKGCMC	2 cut(s)	982, 2285
BaeI	ACNNNNGTAYC	4 cut(s)	365, 398, 1035, 1068
BalI	TGGCCA	1 cut(s)	105
BamHI	GGATCC	1 cut(s)	2348
BanI	GGYRCC	5 cut(s)	373, 776, 937, 2070, 2180
BanII	GRGCYC	3 cut(s)	429, 1044, 1979
BbsI	GAAGAC	1 cut(s)	1449
Bbv12I	GWGCWC	2 cut(s)	2191, 2471
BbvI	GCAGC	6 cut(s)	12, 24, 115, 362, 1096, 2182
BccI	CCATC	3 cut(s)	1784, 2061, 2107
BceAI	ACGGC	1 cut(s)	198
BciT130I	CCWGG	5 cut(s)	249, 527, 756, 1001, 1881
BciVI	GTATCC	2 cut(s)	56, 539
BclI	TGATCA	1 cut(s)	700
BcnI	CCSGG	1 cut(s)	168
BcoDI	GTCTC	2 cut(s)	206, 249
BcuI	ACTAGT	1 cut(s)	1682
BfaI	CTAG	7 cut(s)	17, 173, 600, 1683, 1772, 1968, 2319
BfmI	CTRYAG	5 cut(s)	819, 1257, 1637, 2196, 2334
BfoI	RGCGCY	2 cut(s)	88, 780
BfrI	CTTAAG	2 cut(s)	986, 1795
BfuAI	ACCTGC	1 cut(s)	1189
BfuI	GTATCC	2 cut(s)	56, 539
BisI	GCNGC	7 cut(s)	26, 38, 129, 351, 892, 1110, 2196
BlnI	CCTAGG	2 cut(s)	1771, 1967
BlsI	GCNGC	7 cut(s)	27, 39, 130, 352, 893, 1111, 2197
Bme1390I	CCNGG	6 cut(s)	168, 249, 527, 756, 1001, 1881
Bme18I	GGWCC	3 cut(s)	509, 905, 1740
BmeRI	GACNNNNNGTC	1 cut(s)	1632
BmeT110I	CYCGRG	1 cut(s)	2470
BmgBI	CACGTC	1 cut(s)	1851
BmgT120I	GGNCC	6 cut(s)	338, 509, 523, 905, 1061, 1740
BmiI	GGNNCC	9 cut(s)	375, 778, 939, 968, 1062, 2072, 2182, 2341, 2350
BmrFI	CCNGG	6 cut(s)	168, 249, 527, 756, 1001, 1881
BmsI	GCATC	6 cut(s)	298, 646, 1253, 1547, 1861, 1979
BmtI	GCTAGC	2 cut(s)	603, 2322
BpiI	GAAGAC	1 cut(s)	1449
BpmI	CTGGAG	3 cut(s)	231, 645, 1119
Bpu14I	TTCGAA	2 cut(s)	331, 412
BpuEI	CTTGAG	1 cut(s)	486
BpuMI	CCSGG	1 cut(s)	168
Bsa29I	ATCGAT	1 cut(s)	945
BsaHI	GRCGYC	1 cut(s)	777
BsaJI	CCNNGG	7 cut(s)	167, 525, 632, 962, 1771, 1967, 2081
BsaXI	ACNNNNNCTCC	2 cut(s)	951, 981
Bsc4I	CCNNNNNNNGG	4 cut(s)	248, 506, 976, 1985
Bse1I	ACTGG	3 cut(s)	377, 1469, 1967
BseBI	CCWGG	5 cut(s)	249, 527, 756, 1001, 1881
BseCI	ATCGAT	1 cut(s)	945
BseDI	CCNNGG	7 cut(s)	167, 525, 632, 962, 1771, 1967, 2081
BseGI	GGATG	6 cut(s)	313, 1244, 1555, 1876, 1994, 2051
BseLI	CCNNNNNNNGG	4 cut(s)	248, 506, 976, 1985
BseMII	CTCAG	4 cut(s)	629, 1633, 2190, 2277
BseNI	ACTGG	3 cut(s)	377, 1469, 1967
BseRI	GAGGAG	1 cut(s)	2141
BseSI	GKGCMC	2 cut(s)	982, 2285
BseXI	GCAGC	6 cut(s)	12, 24, 115, 362, 1096, 2182
BseYI	CCCAGC	1 cut(s)	1325
BshNI	GGYRCC	5 cut(s)	373, 776, 937, 2070, 2180
BshVI	ATCGAT	1 cut(s)	945
BsiHKAI	GWGCWC	2 cut(s)	2191, 2471
BsiHKCI	CYCGRG	1 cut(s)	2470
BsiSI	CCGG	1 cut(s)	167
BslFI	GGGAC	1 cut(s)	137
BslI	CCNNNNNNNGG	4 cut(s)	248, 506, 976, 1985
BsmAI	GTCTC	2 cut(s)	206, 249
BsmBI	CGTCTC	1 cut(s)	249
BsmFI	GGGAC	1 cut(s)	137
BsmI	GAATGC	2 cut(s)	1648, 2006
BsoBI	CYCGRG	1 cut(s)	2470
Bsp119I	TTCGAA	2 cut(s)	331, 412
Bsp1286I	GDGCHC	7 cut(s)	429, 982, 1044, 1979, 2191, 2285, 2471
Bsp1407I	TGTACA	1 cut(s)	850
Bsp19I	CCATGG	1 cut(s)	632
BspACI	CCGC	4 cut(s)	369, 892, 1821, 1877
BspCNI	CTCAG	4 cut(s)	628, 1632, 2189, 2278
BspDI	ATCGAT	1 cut(s)	945
BspHI	TCATGA	1 cut(s)	235
BspLI	GGNNCC	9 cut(s)	375, 778, 939, 968, 1062, 2072, 2182, 2341, 2350
BspMAI	CTGCAG	2 cut(s)	1641, 2200
BspMI	ACCTGC	1 cut(s)	1189
BspOI	GCTAGC	2 cut(s)	603, 2322
BspPI	GGATC	7 cut(s)	644, 1337, 1657, 2018, 2343, 2356, 2369
BspQI	GCTCTTC	1 cut(s)	1967
BspT104I	TTCGAA	2 cut(s)	331, 412
BspT107I	GGYRCC	5 cut(s)	373, 776, 937, 2070, 2180
BspTI	CTTAAG	2 cut(s)	986, 1795
BsrGI	TGTACA	1 cut(s)	850
BsrI	ACTGG	3 cut(s)	377, 1469, 1967
BssECI	CCNNGG	7 cut(s)	167, 525, 632, 962, 1771, 1967, 2081
BssNAI	GTATAC	1 cut(s)	1413
BssNI	GRCGYC	1 cut(s)	777
BssT1I	CCWWGG	4 cut(s)	632, 962, 1771, 1967
Bst1107I	GTATAC	1 cut(s)	1413
Bst2UI	CCWGG	5 cut(s)	249, 527, 756, 1001, 1881
Bst6I	CTCTTC	4 cut(s)	1065, 1099, 1967, 2439
BstACI	GRCGYC	1 cut(s)	777
BstAFI	CTTAAG	2 cut(s)	986, 1795
BstAPI	GCANNNNNTGC	3 cut(s)	394, 1027, 1109
BstAUI	TGTACA	1 cut(s)	850
BstBI	TTCGAA	2 cut(s)	331, 412
BstC8I	GCNNGC	6 cut(s)	601, 798, 826, 1466, 2320, 2490
BstDEI	CTNAG	4 cut(s)	615, 1619, 2176, 2286
BstDSI	CCRYGG	2 cut(s)	632, 2081
BstENI	CCTNNNNNAGG	1 cut(s)	504
BstF5I	GGATG	6 cut(s)	313, 1244, 1555, 1876, 1994, 2051
BstH2I	RGCGCY	2 cut(s)	88, 780
BstHHI	GCGC	3 cut(s)	87, 779, 1732
BstMAI	GTCTC	2 cut(s)	206, 249
BstMWI	GCNNNNNNNGC	8 cut(s)	34, 394, 605, 1027, 1109, 1241, 1505, 2195
BstNI	CCWGG	5 cut(s)	249, 527, 756, 1001, 1881
BstNSI	RCATGY	4 cut(s)	445, 684, 868, 1107
BstSCI	CCNGG	6 cut(s)	166, 247, 525, 754, 999, 1879
BstSFI	CTRYAG	5 cut(s)	819, 1257, 1637, 2196, 2334
BstSLI	GKGCMC	2 cut(s)	982, 2285
BstV1I	GCAGC	6 cut(s)	12, 24, 115, 362, 1096, 2182
BstV2I	GAAGAC	1 cut(s)	1449
BstX2I	RGATCY	2 cut(s)	1329, 2348
BstXI	CCANNNNNNTGG	3 cut(s)	842, 2088, 2392
BstYI	RGATCY	2 cut(s)	1329, 2348
BstZ17I	GTATAC	1 cut(s)	1413
Bsu15I	ATCGAT	1 cut(s)	945
BsuI	GTATCC	2 cut(s)	56, 539
BsuTUI	ATCGAT	1 cut(s)	945
BtgI	CCRYGG	2 cut(s)	632, 2081
BtgZI	GCGATG	1 cut(s)	173
BtrI	CACGTC	1 cut(s)	1851
BtsCI	GGATG	6 cut(s)	313, 1244, 1555, 1876, 1994, 2051
BtsI	GCAGTG	1 cut(s)	853
BtsIMutI	CAGTG	7 cut(s)	384, 402, 596, 853, 1042, 1395, 2144
BveI	ACCTGC	1 cut(s)	1189
Cac8I	GCNNGC	6 cut(s)	601, 798, 826, 1466, 2320, 2490
CaiI	CAGNNNCTG	1 cut(s)	668
CciI	TCATGA	1 cut(s)	235
CfoI	GCGC	3 cut(s)	87, 779, 1732
Cfr13I	GGNCC	6 cut(s)	338, 509, 523, 905, 1061, 1740
ClaI	ATCGAT	1 cut(s)	945
Csp6I	GTAC	7 cut(s)	361, 374, 629, 851, 1052, 1713, 2071
CviQI	GTAC	7 cut(s)	361, 374, 629, 851, 1052, 1713, 2071
DdeI	CTNAG	4 cut(s)	615, 1619, 2176, 2286
DinI	GGCGCC	1 cut(s)	778
DraI	TTTAAA	3 cut(s)	766, 1354, 1572
DriI	GACNNNNNGTC	1 cut(s)	1632
EaeI	YGGCCR	3 cut(s)	103, 164, 889
Eam1104I	CTCTTC	4 cut(s)	1065, 1099, 1967, 2439
Eam1105I	GACNNNNNGTC	1 cut(s)	1632
EarI	CTCTTC	4 cut(s)	1065, 1099, 1967, 2439
EciI	GGCGGA	1 cut(s)	1866
Eco130I	CCWWGG	4 cut(s)	632, 962, 1771, 1967
Eco24I	GRGCYC	3 cut(s)	429, 1044, 1979
Eco47I	GGWCC	3 cut(s)	509, 905, 1740
Eco57I	CTGAAG	5 cut(s)	822, 882, 1239, 1549, 1610
Eco88I	CYCGRG	1 cut(s)	2470
EcoNI	CCTNNNNNAGG	1 cut(s)	504
EcoO109I	RGGNCCY	1 cut(s)	1061
EcoRII	CCWGG	5 cut(s)	247, 525, 754, 999, 1879
EcoT14I	CCWWGG	4 cut(s)	632, 962, 1771, 1967
EcoT38I	GRGCYC	3 cut(s)	429, 1044, 1979
EgeI	GGCGCC	1 cut(s)	778
EheI	GGCGCC	1 cut(s)	778
ErhI	CCWWGG	4 cut(s)	632, 962, 1771, 1967
Esp3I	CGTCTC	1 cut(s)	249
FalI	AAGNNNNNCTT	5 cut(s)	36, 474, 506, 2393, 2425
FaqI	GGGAC	1 cut(s)	137
FauI	CCCGC	1 cut(s)	362
FauNDI	CATATG	2 cut(s)	217, 1914
FbaI	TGATCA	1 cut(s)	700
FblI	GTMKAC	1 cut(s)	1412
Fnu4HI	GCNGC	7 cut(s)	26, 38, 129, 351, 892, 1110, 2196
FokI	GGATG	6 cut(s)	320, 1231, 1542, 1883, 2001, 2058
FriOI	GRGCYC	3 cut(s)	429, 1044, 1979
Fsp4HI	GCNGC	7 cut(s)	26, 38, 129, 351, 892, 1110, 2196
FspBI	CTAG	7 cut(s)	17, 173, 600, 1683, 1772, 1968, 2319
FspI	TGCGCA	1 cut(s)	1731
GlaI	GCGC	3 cut(s)	86, 778, 1731
GluI	GCNGC	7 cut(s)	26, 38, 129, 351, 892, 1110, 2196
GsaI	CCCAGC	1 cut(s)	1329
GsuI	CTGGAG	3 cut(s)	231, 645, 1119
HaeII	RGCGCY	2 cut(s)	88, 780
HapII	CCGG	1 cut(s)	167
HhaI	GCGC	3 cut(s)	87, 779, 1732
Hin1I	GRCGYC	1 cut(s)	777
Hin6I	GCGC	3 cut(s)	85, 777, 1730
HinP1I	GCGC	3 cut(s)	85, 777, 1730
HincII	GTYRAC	1 cut(s)	2218
HindII	GTYRAC	1 cut(s)	2218
HindIII	AAGCTT	3 cut(s)	488, 1462, 2486
HinfI	GANTC	6 cut(s)	325, 665, 1484, 1899, 1909, 2225
HpaII	CCGG	1 cut(s)	167
HphI	GGTGA	5 cut(s)	989, 1349, 1895, 2128, 2375
Hpy166II	GTNNAC	7 cut(s)	453, 629, 851, 905, 1413, 1516, 2218
Hpy188I	TCNGA	6 cut(s)	180, 618, 723, 1069, 1276, 1590
Hpy8I	GTNNAC	7 cut(s)	453, 629, 851, 905, 1413, 1516, 2218
HpyAV	CCTTC	6 cut(s)	185, 700, 1074, 1123, 1573, 1585
HpyCH4IV	ACGT	2 cut(s)	1850, 2109
HpyF10VI	GCNNNNNNNGC	8 cut(s)	34, 394, 605, 1027, 1109, 1241, 1505, 2195
HpyF3I	CTNAG	4 cut(s)	615, 1619, 2176, 2286
HpySE526I	ACGT	2 cut(s)	1850, 2109
Hsp92I	GRCGYC	1 cut(s)	777
HspAI	GCGC	3 cut(s)	85, 777, 1730
KasI	GGCGCC	1 cut(s)	776
KpnI	GGTACC	2 cut(s)	377, 2074
Ksp22I	TGATCA	1 cut(s)	700
LguI	GCTCTTC	1 cut(s)	1967
LmnI	GCTCC	5 cut(s)	664, 972, 1100, 1879, 2345
Lsp1109I	GCAGC	6 cut(s)	12, 24, 115, 362, 1096, 2182
LweI	GCATC	6 cut(s)	298, 646, 1253, 1547, 1861, 1979
MaeI	CTAG	7 cut(s)	17, 173, 600, 1683, 1772, 1968, 2319
MaeII	ACGT	2 cut(s)	1850, 2109
MaeIII	GTNAC	4 cut(s)	1678, 2249, 2363, 2476
MfeI	CAATTG	2 cut(s)	1716, 2422
MflI	RGATCY	2 cut(s)	1329, 2348
MhlI	GDGCHC	7 cut(s)	429, 982, 1044, 1979, 2191, 2285, 2471
MlsI	TGGCCA	1 cut(s)	105
MluNI	TGGCCA	1 cut(s)	105
Mly113I	GGCGCC	1 cut(s)	777
MlyI	GAGTC	2 cut(s)	674, 1893
Mox20I	TGGCCA	1 cut(s)	105
MscI	TGGCCA	1 cut(s)	105
MslI	CAYNNNNRTG	3 cut(s)	1987, 2065, 2390
Msp20I	TGGCCA	1 cut(s)	105
MspA1I	CMGCKG	1 cut(s)	800
MspCI	CTTAAG	2 cut(s)	986, 1795
MspI	CCGG	1 cut(s)	167
MspR9I	CCNGG	6 cut(s)	168, 249, 527, 756, 1001, 1881
MunI	CAATTG	2 cut(s)	1716, 2422
Mva1269I	GAATGC	2 cut(s)	1648, 2006
MvaI	CCWGG	5 cut(s)	249, 527, 756, 1001, 1881
MwoI	GCNNNNNNNGC	8 cut(s)	34, 394, 605, 1027, 1109, 1241, 1505, 2195
NarI	GGCGCC	1 cut(s)	777
NciI	CCSGG	1 cut(s)	168
NcoI	CCATGG	1 cut(s)	632
NdeI	CATATG	2 cut(s)	217, 1914
NheI	GCTAGC	2 cut(s)	599, 2318
NlaIV	GGNNCC	9 cut(s)	375, 778, 939, 968, 1062, 2072, 2182, 2341, 2350
NmuCI	GTSAC	1 cut(s)	2363
NsbI	TGCGCA	1 cut(s)	1731
NspI	RCATGY	4 cut(s)	445, 684, 868, 1107
NspV	TTCGAA	2 cut(s)	331, 412
OliI	CACNNNNGTG	1 cut(s)	2390
PaeR7I	CTCGAG	1 cut(s)	2470
PagI	TCATGA	1 cut(s)	235
PciI	ACATGT	1 cut(s)	864
PciSI	GCTCTTC	1 cut(s)	1967
PcsI	WCGNNNNNNNCGW	1 cut(s)	2477
PctI	GAATGC	2 cut(s)	1648, 2006
PfeI	GAWTC	4 cut(s)	325, 1484, 1909, 2225
PkrI	GCNGC	7 cut(s)	27, 39, 130, 352, 893, 1111, 2197
PleI	GAGTC	2 cut(s)	673, 1893
PluTI	GGCGCC	1 cut(s)	780
PpsI	GAGTC	2 cut(s)	673, 1893
PscI	ACATGT	1 cut(s)	864
PsiI	TTATAA	2 cut(s)	914, 1782
Psp1406I	AACGTT	1 cut(s)	2109
Psp6I	CCWGG	5 cut(s)	247, 525, 754, 999, 1879
PspFI	CCCAGC	1 cut(s)	1325
PspGI	CCWGG	5 cut(s)	247, 525, 754, 999, 1879
PspN4I	GGNNCC	9 cut(s)	375, 778, 939, 968, 1062, 2072, 2182, 2341, 2350
PspPI	GGNCC	6 cut(s)	338, 509, 523, 905, 1061, 1740
PspXI	VCTCGAGB	1 cut(s)	2470
PstI	CTGCAG	2 cut(s)	1641, 2200
PstNI	CAGNNNCTG	1 cut(s)	668
PsuI	RGATCY	2 cut(s)	1329, 2348
PvuII	CAGCTG	1 cut(s)	800
RsaI	GTAC	7 cut(s)	362, 375, 630, 852, 1053, 1714, 2072
RsaNI	GTAC	7 cut(s)	361, 374, 629, 851, 1052, 1713, 2071
RseI	CAYNNNNRTG	3 cut(s)	1987, 2065, 2390
SapI	GCTCTTC	1 cut(s)	1967
SatI	GCNGC	7 cut(s)	26, 38, 129, 351, 892, 1110, 2196
Sau96I	GGNCC	6 cut(s)	338, 509, 523, 905, 1061, 1740
SchI	GAGTC	2 cut(s)	674, 1893
ScrFI	CCNGG	6 cut(s)	168, 249, 527, 756, 1001, 1881
SduI	GDGCHC	7 cut(s)	429, 982, 1044, 1979, 2191, 2285, 2471
SfaNI	GCATC	6 cut(s)	298, 646, 1253, 1547, 1861, 1979
SfcI	CTRYAG	5 cut(s)	819, 1257, 1637, 2196, 2334
SfoI	GGCGCC	1 cut(s)	778
Sfr274I	CTCGAG	1 cut(s)	2470
SfuI	TTCGAA	2 cut(s)	331, 412
SinI	GGWCC	3 cut(s)	509, 905, 1740
SlaI	CTCGAG	1 cut(s)	2470
SmiMI	CAYNNNNRTG	3 cut(s)	1987, 2065, 2390
SmlI	CTYRAG	4 cut(s)	501, 986, 1795, 2470
SmoI	CTYRAG	4 cut(s)	501, 986, 1795, 2470
SpeI	ACTAGT	1 cut(s)	1682
SsiI	CCGC	4 cut(s)	369, 892, 1821, 1877
SspDI	GGCGCC	1 cut(s)	776
SspI	AATATT	1 cut(s)	622
SspMI	CTAG	7 cut(s)	17, 173, 600, 1683, 1772, 1968, 2319
StyD4I	CCNGG	6 cut(s)	166, 247, 525, 754, 999, 1879
StyI	CCWWGG	4 cut(s)	632, 962, 1771, 1967
TaiI	ACGT	2 cut(s)	1853, 2112
TaqI	TCGA	5 cut(s)	331, 412, 945, 1902, 2471
TatI	WGTACW	1 cut(s)	850
TauI	GCSGC	1 cut(s)	894
TfiI	GAWTC	4 cut(s)	325, 1484, 1909, 2225
TscAI	CASTG	7 cut(s)	384, 409, 596, 853, 1042, 1402, 2151
TseFI	GTSAC	1 cut(s)	2363
TseI	GCWGC	6 cut(s)	25, 37, 128, 350, 1109, 2195
Tsp45I	GTSAC	1 cut(s)	2363
TspGWI	ACGGA	1 cut(s)	2182
TspRI	CASTG	7 cut(s)	384, 409, 596, 853, 1042, 1402, 2151
Vha464I	CTTAAG	2 cut(s)	986, 1795
VpaK11BI	GGWCC	3 cut(s)	509, 905, 1740
XagI	CCTNNNNNAGG	1 cut(s)	504
XapI	RAATTY	5 cut(s)	735, 883, 2018, 2312, 2450
XceI	RCATGY	4 cut(s)	445, 684, 868, 1107
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2064
XhoI	CTCGAG	1 cut(s)	2470
XmaJI	CCTAGG	2 cut(s)	1771, 1967
XmiI	GTMKAC	1 cut(s)	1412
XspI	CTAG	7 cut(s)	17, 173, 600, 1683, 1772, 1968, 2319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.