Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0007701

Physical Location & Seq

Genomic Coordinates Reverse (-)

34339479 .. 34348605

Gene Structure 9127 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018715

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGAAGATACTAGCTTGGCTGCTGTGTTTGCTACTGTGCTTCACATTGTGTTTGGGATACAATGTGAGCTACGACAGCCGCTCTTTGATAATCAATGGCCAAAGAAAGCTGCTCATTTCTGCTGCCATTCACTACCCTCGTAGTGTCCCTGCGATGTGGCCGGGGCTAGTTCAGAAGGCGAAAGAAGGAGGGGTTGATGTGATTGAGACTTATGTGTTTTGGAATGGTCATGAACCGTCTCCAGGCAATTATTATTTTGGAGGACGATATGATCTGGTCAAATTTGCGAAGATCGTAGAGGACGCTGGAATGTATTTGATTCTTCGAATTGGCCCATTCGTTGCAGCAGAATGGTACTTTGGCGGGGTACCTGTGTGGTTGCATTATGTGCCTGGCACTGTATTTCGAACTGACAATGAGCCCTTTAAGTATCACATGCAGAAGTTCACAACGTTCATAGTTAATCTAATGAAACAGGAGAAGCTTTTTGCACCTCAAGGAGGTCCAATTATTTTGGCCCAGATAGAAAATGAATATGGATACTACGAAAAAGATTATGGAGAGGGGGGCAAAAAATATGCACAGTGGTCTGCTAGCATGGCTGTTGCTCAGAATATAGGTGTGCCATGGATCATGTGCCAACAGTTTGATGCTCCAGAGTCTGTGATAAATACATGTAACTCCTTCTACTGTGACCAATTTACTCCTATTTTTCCGAACAAACCTAAAATTTGGACAGAGAATTGGCCTGGCTGGTTTAAAACATTTGGGGCCAGAAATCCTCACAGGCCAGCTGAAGATATTGCTTTTTCTGTAGCTCGTTTTTTCCAAAAAGGTGGCAGTGTACAAAATTACTACATGTATCATGGAGGAACAAATTTTGGCCGCACTTCAGGTGGACCATTTATAACCACAAGTTATGATTACGAGGCACCAATCGATGAATATGGATTACCAAGGCTTCCAAAATGGGCACATCTTAAGCAACTTCACCTAGCAATTAAGTTATGTGAGCATGCTTTGCTCAACAGTGAACCCACTCATGTATCGTTGGGTCCTTCAGAAGAGGCTGATGTTTTCACCAACTCTTCTGGAGCATGTGCTGCCTTTATTTCTAATATGGATGACAAAAATGACAAAACAGTAGTATTTCGTAATGTGTCATATCATCTACCAGCATGGTCAGTTAGCATACTGCCTGACTGCAAGACTGTAGTATTTAACACAGCAAAGGTAGCATCCCAAACCTCTGTAGTTGAGATGACATCTGAAACTAAAGGCTTGAAAGGTCTTAAATGGGAGGTATTTGTGGAGAAAGCTGGGATCTGGGGTGAAGCTGACTTTGTTAAAACTGGATTTGTAGATCACATAAATACCACAAAATTTACCACCGACTATCTGTGGTATACAACAAGCATATTTGTTGATGAAAATGAAGAGTTCTTAAAGAAAGGAAGCTCACCAGTTCTTCTAATTGAATCAAAAGGCCATGCTCTTCATGCTTTTGTCAATGATGAACTTCAAGACAGTGCATCTGGAAATGGCACGCACCCACCCTTCACTTTAAAGAGTCCTATCTCTCTGAAGGCAGGGAAGAATGAAATTGCTCTACTCAGCATGACAGTTGGTCTGCAGAATGCTGGATCATTTTATGAGTGGGTAGGGGCAGGATTAACTAGTGTCAAGATTAAGGGTTTCAACAAGGGTACAATTGATTTGTCCGCGCATAATTGGACCTACAAGATTGGGGTGCAAGGAGAACACCTAGGACTTTACAAGGAAGATGGCTCAAGTAATGTAACTTGGGTTTCAACCTCAGACCCGCCAAAGAAACAACCTTTGACGTGGTATAAGGCTATTGTGGACCCTCCGCCAGGTGATGAACCTATTGGACTGGATATGATTGATATGGGAAAAGGTCTGGCTTGGTTGAATGGAGAAGAAATTGGAAGATACTGGCCTAGGAAGAGCCCTACACATGGATGTGTTCAAGAATGTAATTATAGAGGAAAATTTGATCCAGACAAATGCAATACAGGATGTGGAGAACCAACACAGAGATGGTACCATGTTCCACGGTCTTGGTTCAAACCATCTGGAAACGTTCTGGTGATATTTGAGGAGAAAGGTGGAGATCCGTCGAAAATTGAGTTTTCGAGACGGAAAATCTCAGGTGCCTGTGCTGTTGCTGCAGTAGATTACCCCTCTGTTGATCTTGAATCTTGGCGTGGGGAAAGTGGAACAAACAAAAGCATTTCAACCATCAACTTGAAGTGCCCTGAGAACACACGTATATCTACTGTAAAATTTGCCAGCTTTGGAAATCCTACAGGCTCCTGTGGATCCTACACCAAAGGTGACTGCCACGATCCTAACTCCACTTCTGTGGTTGAAAAGATATGCTTAAACCAAAACAAATGTGCCATAGAATTGGCAGAAGAGAAATTTAGTAAGGGGTTGTGTCCGAGTGTAACGAAGAAGCTTGCAGTTGAAGTAGTGTGCGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009505 GO:0009628 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

836

Amino Acids

92.89

Weight (kDa)

6.71

Isoelectric Point (pI)

36.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	28 - 332	1.5e-116	Glycosyl hydrolases family 35
GHD	PF17834	356 - 412	1.2e-24	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	614 - 701	1.1e-20	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	757 - 834	9e-18	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63810
fragaria_vesca	FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130
malus_domestica	MD15G1136400.v1.1
prunus_persica	Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1
pyrus_communis	pycom15g12300
rosa_chinensis	RchiOBHm_Chr2g0122791
rosa_laevigata	RLG00000018715
rosa_multiflora	Rmu_sc0008528.1_g000013 Rmu_sc0037008.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121170
rosa_rugosa	Rorug02G0242600 Rorug02G0242700 Rorug02G0242700
rosa_samantha	Rh2AG301300 Rh2BG308700 Rh2CG287400 Rh2DG325500
rosa_wichuraiana	Rw2G023890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	908
Acc65I	GGTACC	2 cut(s)	367, 2064
AccB1I	GGYRCC	4 cut(s)	367, 931, 2064, 2174
AccBSI	CCGCTC	1 cut(s)	81
AccI	GTMKAC	1 cut(s)	1406
AccII	CGCG	1 cut(s)	1724
AciI	CCGC	7 cut(s)	79, 363, 886, 1722, 1823, 1871, 2502
AclI	AACGTT	2 cut(s)	452, 2103
AclWI	GGATC	8 cut(s)	638, 1331, 1651, 2012, 2129, 2337, 2350, 2363
AcoI	YGGCCR	3 cut(s)	97, 158, 883
AcsI	RAATTY	7 cut(s)	281, 729, 877, 1382, 2012, 2306, 2444
AcuI	CTGAAG	4 cut(s)	816, 876, 1044, 1604
AdeI	CACNNNGTG	1 cut(s)	48
AfaI	GTAC	5 cut(s)	356, 369, 846, 1708, 2066
AfiI	CCNNNNNNNGG	4 cut(s)	242, 500, 1874, 1979
AflII	CTTAAG	1 cut(s)	980
AflIII	ACRYGT	3 cut(s)	674, 858, 2288
AhdI	GACNNNNNGTC	1 cut(s)	1626
AhlI	ACTAGT	1 cut(s)	1676
AjiI	CACGTC	1 cut(s)	1845
AjnI	CCWGG	4 cut(s)	241, 391, 748, 1873
AjuI	GAANNNNNNNTTGG	2 cut(s)	342, 374
AleI	CACNNNNGTG	1 cut(s)	2384
Alw26I	GTCTC	3 cut(s)	200, 243, 2152
AlwI	GGATC	8 cut(s)	638, 1331, 1651, 2012, 2129, 2337, 2350, 2363
AlwNI	CAGNNNCTG	1 cut(s)	662
ApeKI	GCWGC	6 cut(s)	19, 109, 122, 344, 1103, 2189
ApoI	RAATTY	7 cut(s)	281, 729, 877, 1382, 2012, 2306, 2444
Asp718I	GGTACC	2 cut(s)	367, 2064
AspA2I	CCTAGG	2 cut(s)	1765, 1961
AspLEI	GCGC	1 cut(s)	1726
AspS9I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
AsuC2I	CCSGG	1 cut(s)	162
AsuHPI	GGTGA	7 cut(s)	983, 1072, 1343, 1452, 1889, 2122, 2369
AsuII	TTCGAA	2 cut(s)	325, 406
AsuNHI	GCTAGC	1 cut(s)	593
AvaII	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
AvrII	CCTAGG	2 cut(s)	1765, 1961
BaeGI	GKGCMC	2 cut(s)	976, 2279
BaeI	ACNNNNGTAYC	4 cut(s)	359, 392, 1029, 1062
BalI	TGGCCA	1 cut(s)	99
BamHI	GGATCC	1 cut(s)	2342
BanI	GGYRCC	4 cut(s)	367, 931, 2064, 2174
BanII	GRGCYC	2 cut(s)	423, 1973
BbvI	GCAGC	6 cut(s)	6, 96, 109, 356, 1090, 2176
BccI	CCATC	4 cut(s)	1778, 2055, 2101, 2270
BciT130I	CCWGG	4 cut(s)	243, 393, 750, 1875
BciVI	GTATCC	2 cut(s)	50, 533
BcnI	CCSGG	1 cut(s)	162
BcoDI	GTCTC	3 cut(s)	200, 243, 2152
BcuI	ACTAGT	1 cut(s)	1676
BfaI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962
BfmI	CTRYAG	6 cut(s)	813, 1212, 1251, 1631, 2190, 2328
BfrI	CTTAAG	1 cut(s)	980
BfuI	GTATCC	2 cut(s)	50, 533
BisI	GCNGC	9 cut(s)	20, 79, 110, 123, 345, 886, 1104, 2190, 2503
BlnI	CCTAGG	2 cut(s)	1765, 1961
BlsI	GCNGC	9 cut(s)	21, 80, 111, 124, 346, 887, 1105, 2191, 2504
Bme1390I	CCNGG	5 cut(s)	162, 243, 393, 750, 1875
Bme18I	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
BmeRI	GACNNNNNGTC	1 cut(s)	1626
BmgBI	CACGTC	1 cut(s)	1845
BmgT120I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
BmiI	GGNNCC	9 cut(s)	369, 772, 933, 1056, 1866, 2066, 2176, 2335, 2344
BmrFI	CCNGG	5 cut(s)	162, 243, 393, 750, 1875
BmsI	GCATC	3 cut(s)	640, 1247, 1541
BmtI	GCTAGC	1 cut(s)	597
BpmI	CTGGAG	3 cut(s)	225, 639, 1113
Bpu14I	TTCGAA	2 cut(s)	325, 406
BpuEI	CTTGAG	2 cut(s)	480, 1774
BpuMI	CCSGG	1 cut(s)	162
Bsa29I	ATCGAT	1 cut(s)	939
BsaAI	YACGTR	1 cut(s)	2291
BsaJI	CCNNGG	6 cut(s)	161, 626, 956, 1765, 1961, 2075
Bsc4I	CCNNNNNNNGG	4 cut(s)	242, 500, 1874, 1979
Bse1I	ACTGG	4 cut(s)	1357, 1463, 1899, 1961
BseBI	CCWGG	4 cut(s)	243, 393, 750, 1875
BseCI	ATCGAT	1 cut(s)	939
BseDI	CCNNGG	6 cut(s)	161, 626, 956, 1765, 1961, 2075
BseGI	GGATG	4 cut(s)	1129, 1238, 1988, 2045
BseLI	CCNNNNNNNGG	4 cut(s)	242, 500, 1874, 1979
BseMII	CTCAG	5 cut(s)	623, 1627, 1830, 2184, 2271
BseNI	ACTGG	4 cut(s)	1357, 1463, 1899, 1961
BseRI	GAGGAG	1 cut(s)	2135
BseSI	GKGCMC	2 cut(s)	976, 2279
BseXI	GCAGC	6 cut(s)	6, 96, 109, 356, 1090, 2176
BseYI	CCCAGC	1 cut(s)	1319
Bsh1236I	CGCG	1 cut(s)	1724
BshNI	GGYRCC	4 cut(s)	367, 931, 2064, 2174
BshVI	ATCGAT	1 cut(s)	939
BsiSI	CCGG	1 cut(s)	161
BslFI	GGGAC	1 cut(s)	131
BslI	CCNNNNNNNGG	4 cut(s)	242, 500, 1874, 1979
BsmAI	GTCTC	3 cut(s)	200, 243, 2152
BsmBI	CGTCTC	2 cut(s)	243, 2152
BsmFI	GGGAC	1 cut(s)	131
BsmI	GAATGC	1 cut(s)	1642
Bsp119I	TTCGAA	2 cut(s)	325, 406
Bsp1286I	GDGCHC	4 cut(s)	423, 976, 1973, 2279
Bsp1407I	TGTACA	1 cut(s)	844
Bsp19I	CCATGG	1 cut(s)	626
BspACI	CCGC	7 cut(s)	79, 363, 886, 1722, 1823, 1871, 2502
BspCNI	CTCAG	5 cut(s)	622, 1626, 1829, 2183, 2272
BspDI	ATCGAT	1 cut(s)	939
BspFNI	CGCG	1 cut(s)	1724
BspHI	TCATGA	1 cut(s)	229
BspLI	GGNNCC	9 cut(s)	369, 772, 933, 1056, 1866, 2066, 2176, 2335, 2344
BspMAI	CTGCAG	2 cut(s)	1635, 2194
BspOI	GCTAGC	1 cut(s)	597
BspPI	GGATC	8 cut(s)	638, 1331, 1651, 2012, 2129, 2337, 2350, 2363
BspQI	GCTCTTC	2 cut(s)	1500, 1961
BspT104I	TTCGAA	2 cut(s)	325, 406
BspT107I	GGYRCC	4 cut(s)	367, 931, 2064, 2174
BspTI	CTTAAG	1 cut(s)	980
BsrBI	CCGCTC	1 cut(s)	81
BsrGI	TGTACA	1 cut(s)	844
BsrI	ACTGG	4 cut(s)	1357, 1463, 1899, 1961
BssECI	CCNNGG	6 cut(s)	161, 626, 956, 1765, 1961, 2075
BssNAI	GTATAC	1 cut(s)	1407
BssT1I	CCWWGG	4 cut(s)	626, 956, 1765, 1961
Bst1107I	GTATAC	1 cut(s)	1407
Bst2UI	CCWGG	4 cut(s)	243, 393, 750, 1875
Bst6I	CTCTTC	6 cut(s)	1059, 1093, 1431, 1500, 1961, 2433
BstAFI	CTTAAG	1 cut(s)	980
BstAPI	GCANNNNNTGC	3 cut(s)	388, 1021, 1103
BstAUI	TGTACA	1 cut(s)	844
BstBAI	YACGTR	1 cut(s)	2291
BstBI	TTCGAA	2 cut(s)	325, 406
BstC8I	GCNNGC	6 cut(s)	595, 792, 1017, 1547, 2314, 2484
BstDEI	CTNAG	5 cut(s)	609, 1613, 1816, 2170, 2280
BstDSI	CCRYGG	2 cut(s)	626, 2075
BstENI	CCTNNNNNAGG	2 cut(s)	498, 1872
BstF5I	GGATG	4 cut(s)	1129, 1238, 1988, 2045
BstFNI	CGCG	1 cut(s)	1724
BstHHI	GCGC	1 cut(s)	1726
BstMAI	GTCTC	3 cut(s)	200, 243, 2152
BstMWI	GCNNNNNNNGC	9 cut(s)	28, 75, 388, 599, 1021, 1103, 1235, 1499, 2189
BstNI	CCWGG	4 cut(s)	243, 393, 750, 1875
BstNSI	RCATGY	5 cut(s)	439, 678, 862, 1019, 1101
BstSCI	CCNGG	5 cut(s)	160, 241, 391, 748, 1873
BstSFI	CTRYAG	6 cut(s)	813, 1212, 1251, 1631, 2190, 2328
BstSLI	GKGCMC	2 cut(s)	976, 2279
BstUI	CGCG	1 cut(s)	1724
BstV1I	GCAGC	6 cut(s)	6, 96, 109, 356, 1090, 2176
BstX2I	RGATCY	3 cut(s)	1323, 2134, 2342
BstXI	CCANNNNNNTGG	4 cut(s)	836, 2082, 2386, 2431
BstYI	RGATCY	3 cut(s)	1323, 2134, 2342
BstZ17I	GTATAC	1 cut(s)	1407
Bsu15I	ATCGAT	1 cut(s)	939
BsuI	GTATCC	2 cut(s)	50, 533
BsuTUI	ATCGAT	1 cut(s)	939
BtgI	CCRYGG	2 cut(s)	626, 2075
BtgZI	GCGATG	1 cut(s)	167
BtrI	CACGTC	1 cut(s)	1845
BtsCI	GGATG	4 cut(s)	1129, 1238, 1988, 2045
BtsI	GCAGTG	1 cut(s)	847
BtsIMutI	CAGTG	5 cut(s)	396, 590, 847, 1036, 1534
Cac8I	GCNNGC	6 cut(s)	595, 792, 1017, 1547, 2314, 2484
CaiI	CAGNNNCTG	1 cut(s)	662
CciI	TCATGA	1 cut(s)	229
CfoI	GCGC	1 cut(s)	1726
Cfr13I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
ClaI	ATCGAT	1 cut(s)	939
CseI	GACGC	1 cut(s)	311
Csp6I	GTAC	5 cut(s)	355, 368, 845, 1707, 2065
CviQI	GTAC	5 cut(s)	355, 368, 845, 1707, 2065
DdeI	CTNAG	5 cut(s)	609, 1613, 1816, 2170, 2280
DraI	TTTAAA	2 cut(s)	760, 1566
DraIII	CACNNNGTG	1 cut(s)	48
DriI	GACNNNNNGTC	1 cut(s)	1626
EaeI	YGGCCR	3 cut(s)	97, 158, 883
Eam1104I	CTCTTC	6 cut(s)	1059, 1093, 1431, 1500, 1961, 2433
Eam1105I	GACNNNNNGTC	1 cut(s)	1626
EarI	CTCTTC	6 cut(s)	1059, 1093, 1431, 1500, 1961, 2433
EciI	GGCGGA	1 cut(s)	1860
Eco130I	CCWWGG	4 cut(s)	626, 956, 1765, 1961
Eco24I	GRGCYC	2 cut(s)	423, 1973
Eco47I	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
Eco57I	CTGAAG	4 cut(s)	816, 876, 1044, 1604
EcoNI	CCTNNNNNAGG	2 cut(s)	498, 1872
EcoO109I	RGGNCCY	1 cut(s)	1055
EcoRII	CCWGG	4 cut(s)	241, 391, 748, 1873
EcoT14I	CCWWGG	4 cut(s)	626, 956, 1765, 1961
EcoT38I	GRGCYC	2 cut(s)	423, 1973
ErhI	CCWWGG	4 cut(s)	626, 956, 1765, 1961
Esp3I	CGTCTC	2 cut(s)	243, 2152
FalI	AAGNNNNNCTT	2 cut(s)	2387, 2419
FaqI	GGGAC	1 cut(s)	131
FauI	CCCGC	2 cut(s)	356, 1830
FblI	GTMKAC	1 cut(s)	1406
Fnu4HI	GCNGC	9 cut(s)	20, 79, 110, 123, 345, 886, 1104, 2190, 2503
FokI	GGATG	4 cut(s)	1136, 1225, 1995, 2052
FriOI	GRGCYC	2 cut(s)	423, 1973
Fsp4HI	GCNGC	9 cut(s)	20, 79, 110, 123, 345, 886, 1104, 2190, 2503
FspBI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962
GlaI	GCGC	1 cut(s)	1725
GluI	GCNGC	9 cut(s)	20, 79, 110, 123, 345, 886, 1104, 2190, 2503
GsaI	CCCAGC	1 cut(s)	1323
GsuI	CTGGAG	3 cut(s)	225, 639, 1113
HapII	CCGG	1 cut(s)	161
HgaI	GACGC	1 cut(s)	311
HhaI	GCGC	1 cut(s)	1726
Hin6I	GCGC	1 cut(s)	1724
HinP1I	GCGC	1 cut(s)	1724
HindIII	AAGCTT	2 cut(s)	482, 2480
HinfI	GANTC	5 cut(s)	319, 659, 1478, 1570, 2219
HpaII	CCGG	1 cut(s)	161
HphI	GGTGA	7 cut(s)	983, 1072, 1343, 1452, 1889, 2122, 2369
Hpy166II	GTNNAC	6 cut(s)	447, 845, 899, 1034, 1407, 1864
Hpy188I	TCNGA	8 cut(s)	174, 612, 717, 1063, 1270, 1584, 1819, 2466
Hpy8I	GTNNAC	6 cut(s)	447, 845, 899, 1034, 1407, 1864
Hpy99I	CGWCG	1 cut(s)	2143
HpyAV	CCTTC	6 cut(s)	169, 179, 694, 1068, 1567, 1579
HpyCH4IV	ACGT	4 cut(s)	452, 1844, 2103, 2290
HpyF10VI	GCNNNNNNNGC	9 cut(s)	28, 75, 388, 599, 1021, 1103, 1235, 1499, 2189
HpyF3I	CTNAG	5 cut(s)	609, 1613, 1816, 2170, 2280
HpySE526I	ACGT	4 cut(s)	452, 1844, 2103, 2290
HspAI	GCGC	1 cut(s)	1724
KpnI	GGTACC	2 cut(s)	371, 2068
LguI	GCTCTTC	2 cut(s)	1500, 1961
LmnI	GCTCC	3 cut(s)	658, 1094, 2339
Lsp1109I	GCAGC	6 cut(s)	6, 96, 109, 356, 1090, 2176
LweI	GCATC	3 cut(s)	640, 1247, 1541
MaeI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962
MaeII	ACGT	4 cut(s)	452, 1844, 2103, 2290
MaeIII	GTNAC	5 cut(s)	677, 692, 1798, 2357, 2470
MbiI	CCGCTC	1 cut(s)	81
MfeI	CAATTG	1 cut(s)	1710
MflI	RGATCY	3 cut(s)	1323, 2134, 2342
MhlI	GDGCHC	4 cut(s)	423, 976, 1973, 2279
MlsI	TGGCCA	1 cut(s)	99
MluNI	TGGCCA	1 cut(s)	99
MlyI	GAGTC	2 cut(s)	668, 1579
Mox20I	TGGCCA	1 cut(s)	99
MscI	TGGCCA	1 cut(s)	99
MslI	CAYNNNNRTG	4 cut(s)	1981, 1983, 2059, 2384
Msp20I	TGGCCA	1 cut(s)	99
MspA1I	CMGCKG	1 cut(s)	794
MspCI	CTTAAG	1 cut(s)	980
MspI	CCGG	1 cut(s)	161
MspR9I	CCNGG	5 cut(s)	162, 243, 393, 750, 1875
MunI	CAATTG	1 cut(s)	1710
Mva1269I	GAATGC	1 cut(s)	1642
MvaI	CCWGG	4 cut(s)	243, 393, 750, 1875
MvnI	CGCG	1 cut(s)	1724
MwoI	GCNNNNNNNGC	9 cut(s)	28, 75, 388, 599, 1021, 1103, 1235, 1499, 2189
NciI	CCSGG	1 cut(s)	162
NcoI	CCATGG	1 cut(s)	626
NheI	GCTAGC	1 cut(s)	593
NlaIV	GGNNCC	9 cut(s)	369, 772, 933, 1056, 1866, 2066, 2176, 2335, 2344
NmuCI	GTSAC	2 cut(s)	692, 2357
NspI	RCATGY	5 cut(s)	439, 678, 862, 1019, 1101
NspV	TTCGAA	2 cut(s)	325, 406
OliI	CACNNNNGTG	1 cut(s)	2384
PaeI	GCATGC	1 cut(s)	1019
PagI	TCATGA	1 cut(s)	229
PciI	ACATGT	2 cut(s)	674, 858
PciSI	GCTCTTC	2 cut(s)	1500, 1961
PctI	GAATGC	1 cut(s)	1642
PfeI	GAWTC	3 cut(s)	319, 1478, 2219
PkrI	GCNGC	9 cut(s)	21, 80, 111, 124, 346, 887, 1105, 2191, 2504
PleI	GAGTC	2 cut(s)	667, 1578
PpsI	GAGTC	2 cut(s)	667, 1578
Ppu21I	YACGTR	1 cut(s)	2291
PpuMI	RGGWCCY	1 cut(s)	1055
PscI	ACATGT	2 cut(s)	674, 858
PsiI	TTATAA	1 cut(s)	908
Psp1406I	AACGTT	2 cut(s)	452, 2103
Psp5II	RGGWCCY	1 cut(s)	1055
Psp6I	CCWGG	4 cut(s)	241, 391, 748, 1873
PspFI	CCCAGC	1 cut(s)	1319
PspGI	CCWGG	4 cut(s)	241, 391, 748, 1873
PspN4I	GGNNCC	9 cut(s)	369, 772, 933, 1056, 1866, 2066, 2176, 2335, 2344
PspPI	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
PspPPI	RGGWCCY	1 cut(s)	1055
PstI	CTGCAG	2 cut(s)	1635, 2194
PstNI	CAGNNNCTG	1 cut(s)	662
PsuI	RGATCY	3 cut(s)	1323, 2134, 2342
PvuII	CAGCTG	1 cut(s)	794
RsaI	GTAC	5 cut(s)	356, 369, 846, 1708, 2066
RsaNI	GTAC	5 cut(s)	355, 368, 845, 1707, 2065
RseI	CAYNNNNRTG	4 cut(s)	1981, 1983, 2059, 2384
SapI	GCTCTTC	2 cut(s)	1500, 1961
SatI	GCNGC	9 cut(s)	20, 79, 110, 123, 345, 886, 1104, 2190, 2503
Sau96I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
SchI	GAGTC	2 cut(s)	668, 1579
ScrFI	CCNGG	5 cut(s)	162, 243, 393, 750, 1875
SduI	GDGCHC	4 cut(s)	423, 976, 1973, 2279
SfaNI	GCATC	3 cut(s)	640, 1247, 1541
SfcI	CTRYAG	6 cut(s)	813, 1212, 1251, 1631, 2190, 2328
SfuI	TTCGAA	2 cut(s)	325, 406
SinI	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
SmiMI	CAYNNNNRTG	4 cut(s)	1981, 1983, 2059, 2384
SmlI	CTYRAG	3 cut(s)	495, 980, 1789
SmoI	CTYRAG	3 cut(s)	495, 980, 1789
SpeI	ACTAGT	1 cut(s)	1676
SphI	GCATGC	1 cut(s)	1019
SsiI	CCGC	7 cut(s)	79, 363, 886, 1722, 1823, 1871, 2502
SspMI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962
StyD4I	CCNGG	5 cut(s)	160, 241, 391, 748, 1873
StyI	CCWWGG	4 cut(s)	626, 956, 1765, 1961
TaiI	ACGT	4 cut(s)	455, 1847, 2106, 2293
TaqI	TCGA	5 cut(s)	325, 406, 939, 2141, 2156
TatI	WGTACW	1 cut(s)	844
TauI	GCSGC	3 cut(s)	81, 888, 2505
TfiI	GAWTC	3 cut(s)	319, 1478, 2219
TscAI	CASTG	5 cut(s)	403, 590, 847, 1036, 1534
TseFI	GTSAC	2 cut(s)	692, 2357
TseI	GCWGC	6 cut(s)	19, 109, 122, 344, 1103, 2189
Tsp45I	GTSAC	2 cut(s)	692, 2357
TspGWI	ACGGA	2 cut(s)	2127, 2176
TspRI	CASTG	5 cut(s)	403, 590, 847, 1036, 1534
Vha464I	CTTAAG	1 cut(s)	980
VpaK11BI	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
XagI	CCTNNNNNAGG	2 cut(s)	498, 1872
XapI	RAATTY	7 cut(s)	281, 729, 877, 1382, 2012, 2306, 2444
XceI	RCATGY	5 cut(s)	439, 678, 862, 1019, 1101
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2058
XmaJI	CCTAGG	2 cut(s)	1765, 1961
XmiI	GTMKAC	1 cut(s)	1406
XspI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.