Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0007701

Physical Location & Seq

Genomic Coordinates Reverse (-)

32263397 .. 32273485

Gene Structure 10089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG287400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGAAGATACTAGCTTGGCTGCTTTCTTTGCTACTGTGCTTCACATTGTGTTTGGGATACAATGTGAGCTACGACAGCCGCTCTTTGATAATCAATGGCCAAAGAAAGCTGCTCATTTCTGCTGCCATTCACTACCCTCGTAGTGTCCCTGCGATGTGGCCGGGGCTAGTTCAGACGGCGAAAGAAGGAGGGGTTGATGTGATTGAGACATATGTGTTTTGGAATGGTCATGAACCGTCTCCAGGCAATTATTATTTTGGAGGACGATATGATCTGGTCAAATTTGCGAAGATCGTGGAGGACGCTGGAATGTATTTGATTCTTCGAATTGGCCCATTCGTTGCAGCAGAATGGTACTTTGGCGGGGTACCTGTGTGGTTGCATTATGTGCCTGACACTGTATTTCGAACTGACAATGAGCCCTTTAAGTATCACATGCAGAAGTTCACAACGTTCATAGTTAATCTAATGAAACAGGAGAAGCTTTTTGCACCTCAAGGAGGTCCAATTATTTTGGCCCAGATAGAAAATGAATATGGATACTACGAAAAAGATTATGGAGAGGGGGGCAAAAAATATGCACAGTGGTCTGCTAGCATGGCTGTTGCTCAGAATATAGGTGTGCCATGGATCATGTGCCAACAGTTTGATGCTCCAGAGTCTGTGATAAATACATGTAACTCCTTCTACTGTGACCAATTTACTCCTATTTTTCCGAACAAACCTAAAATTTGGACAGAGAATTGGCCTGGCTGGTTTAAAACATTTGGGGCCAGAAATCCTCACAGGCCAGCTGAAGATATTGCTTTTTCTGTAGCTCGTTTTTTCCAAAAAGGTGGCAGTGTACAAAATTACTACATGTATCATGGAGGAACAAATTTTGGCCGCACTTCAGGTGGACCATTTATAACCACAAGTTATGACTATGAGGCACCAATCGATGAATATGGATTACCAAGGCTTCCAAAATGGGCACATCTTAAGCAACTTCACCTAGCAATTAAGTTATGTGACCATGCTTTGCTCAACAGTGAACCCACTCATGTATCGTTGGGTCCTTCGGAAGAGGCTGATGTTTTCACCAACTCTTCTGGAGCATGTGCTGCCTTTATTTCTAATACGGACGACAAAAATGACAAAACCGTAGTATTTCGTAATGTGTCATATCATCTACCAGCATGGTCAGTTAGCATACTGCCTGACTGCAAGACTGTAGTATTCAACACAGCAAAGGTAACATCCCAAACCTCTGTAGTTGAGATGGCATCTGAAAATAAAGGCTTGAAAGGTCTTAAATGGGAGGTATTTGTGGAGAAAGCTGGGATCTGGGGTGAAGCTGACTTTGTTAAAACTGGACTTGTAGATCACATCAATACCACAAAATTTACCACTGACTATCTGTGGTATACAACAAGCATATTTGTTGATGAAAATGAAGCGTTCTTAAAGAAAGGAAGCTCACCAGTGCTTCTAATTGAATCAAAAGGCCATGCTCTCCATGCTTTTGTCAATGATGAACTTCAAGATAGTGCATCTGGAAATGGCACGCATCCACCCTTCACTTTAAAGAGTCCTATCTCTCTGAAGGCTGGGAAGAATGAAATTGCTCTACTCAGCATGACAGTTGGTCTGCAGAATGCTGGATCATTTTATGAGTGGGTAGGGGCAGGACTAACTAGTGTCAAGATTAAGGGTTTCAACAATGGTACAATTGATTTGTCTGCACAGAATTGGACCTACAAGATTGGGGTGCAAGGAGAACACCTAGGACTTTACAAGAAAGATGGCTCAAGTAATGTAACTTGGGTTTCAACCTCAGACCCGCCAAAGAAACAACCTTTGACGTGGTATAAGGCTATTGTGGACCTTCCGCCAGGTGATGAACCTATTGGACTGGATATGATTGACATGGGAAAAGGTCTGGCTTGGTTGAATGGAGAAGAAATTGGAAGATACTGGCCTAGGAAGAGCCCTACACATGGATGTGTTCAAGAATGCAATTATAGAGGAAAATTTGATCCAGACAAATGCAATACAGGATGTGGAGAACCAACACAGAGATGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009505 GO:0009628 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

688

Amino Acids

76.93

Weight (kDa)

6.3

Isoelectric Point (pI)

34.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	28 - 332	2.2e-116	Glycosyl hydrolases family 35
GHD	PF17834	356 - 412	6.4e-25	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	614 - 658	1.4e-13	Beta-galactosidase, galactose-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63810
fragaria_vesca	FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130
malus_domestica	MD15G1136400.v1.1
prunus_persica	Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1
pyrus_communis	pycom15g12300
rosa_chinensis	RchiOBHm_Chr2g0122791
rosa_laevigata	RLG00000018715
rosa_multiflora	Rmu_sc0008528.1_g000013 Rmu_sc0037008.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121170
rosa_rugosa	Rorug02G0242600 Rorug02G0242700 Rorug02G0242700
rosa_samantha	Rh2AG301300 Rh2BG308700 Rh2CG287400 Rh2DG325500
rosa_wichuraiana	Rw2G023890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	908
Acc65I	GGTACC	1 cut(s)	367
AccB1I	GGYRCC	2 cut(s)	367, 931
AccBSI	CCGCTC	1 cut(s)	81
AccI	GTMKAC	1 cut(s)	1406
AciI	CCGC	5 cut(s)	79, 363, 886, 1823, 1871
AclI	AACGTT	1 cut(s)	452
AclWI	GGATC	4 cut(s)	638, 1331, 1651, 2012
AcoI	YGGCCR	3 cut(s)	97, 158, 883
AcsI	RAATTY	5 cut(s)	281, 729, 877, 1382, 2012
AcuI	CTGAAG	3 cut(s)	816, 876, 1604
AdeI	CACNNNGTG	1 cut(s)	48
AfaI	GTAC	4 cut(s)	356, 369, 846, 1708
AfiI	CCNNNNNNNGG	3 cut(s)	242, 500, 1979
AflII	CTTAAG	1 cut(s)	980
AflIII	ACRYGT	2 cut(s)	674, 858
AgsI	TTSAA	8 cut(s)	1222, 1285, 1478, 1523, 1699, 1812, 1933, 1991
AhdI	GACNNNNNGTC	1 cut(s)	1626
AhlI	ACTAGT	1 cut(s)	1676
AjiI	CACGTC	1 cut(s)	1845
AjnI	CCWGG	3 cut(s)	241, 748, 1873
AjuI	GAANNNNNNNTTGG	2 cut(s)	342, 374
AluBI	AGCT	9 cut(s)	14, 69, 109, 484, 794, 818, 1319, 1337, 1458
AluI	AGCT	9 cut(s)	14, 69, 109, 484, 794, 818, 1319, 1337, 1458
Alw26I	GTCTC	2 cut(s)	200, 243
AlwI	GGATC	4 cut(s)	638, 1331, 1651, 2012
AlwNI	CAGNNNCTG	1 cut(s)	662
ApeKI	GCWGC	5 cut(s)	19, 109, 122, 344, 1103
ApoI	RAATTY	5 cut(s)	281, 729, 877, 1382, 2012
Asp718I	GGTACC	1 cut(s)	367
AspA2I	CCTAGG	2 cut(s)	1765, 1961
AspS9I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
AsuC2I	CCSGG	1 cut(s)	162
AsuHPI	GGTGA	5 cut(s)	983, 1072, 1343, 1452, 1889
AsuII	TTCGAA	2 cut(s)	325, 406
AsuNHI	GCTAGC	1 cut(s)	593
AvaII	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
AvrII	CCTAGG	2 cut(s)	1765, 1961
BaeGI	GKGCMC	1 cut(s)	976
BaeI	ACNNNNGTAYC	4 cut(s)	359, 392, 1029, 1062
BalI	TGGCCA	1 cut(s)	99
BanI	GGYRCC	2 cut(s)	367, 931
BanII	GRGCYC	2 cut(s)	423, 1973
BbvI	GCAGC	5 cut(s)	6, 96, 109, 356, 1090
BccI	CCATC	3 cut(s)	1255, 1778, 2055
BceAI	ACGGC	1 cut(s)	192
BciT130I	CCWGG	3 cut(s)	243, 750, 1875
BciVI	GTATCC	2 cut(s)	50, 533
BcnI	CCSGG	1 cut(s)	162
BcoDI	GTCTC	2 cut(s)	200, 243
BcuI	ACTAGT	1 cut(s)	1676
BfaI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962
BfmI	CTRYAG	4 cut(s)	813, 1212, 1251, 1631
BfrI	CTTAAG	1 cut(s)	980
BfuI	GTATCC	2 cut(s)	50, 533
BisI	GCNGC	7 cut(s)	20, 79, 110, 123, 345, 886, 1104
BlnI	CCTAGG	2 cut(s)	1765, 1961
BlsI	GCNGC	7 cut(s)	21, 80, 111, 124, 346, 887, 1105
Bme1390I	CCNGG	4 cut(s)	162, 243, 750, 1875
Bme18I	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
BmeRI	GACNNNNNGTC	1 cut(s)	1626
BmgBI	CACGTC	1 cut(s)	1845
BmgT120I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
BmiI	GGNNCC	4 cut(s)	369, 772, 933, 1056
BmrFI	CCNGG	4 cut(s)	162, 243, 750, 1875
BmsI	GCATC	4 cut(s)	640, 1274, 1541, 1558
BmtI	GCTAGC	1 cut(s)	597
BpmI	CTGGAG	3 cut(s)	225, 639, 1113
Bpu14I	TTCGAA	2 cut(s)	325, 406
BpuEI	CTTGAG	2 cut(s)	480, 1774
BpuMI	CCSGG	1 cut(s)	162
Bsa29I	ATCGAT	1 cut(s)	939
BsaJI	CCNNGG	5 cut(s)	161, 626, 956, 1765, 1961
Bsc4I	CCNNNNNNNGG	3 cut(s)	242, 500, 1979
Bse1I	ACTGG	4 cut(s)	1357, 1463, 1899, 1961
BseBI	CCWGG	3 cut(s)	243, 750, 1875
BseCI	ATCGAT	1 cut(s)	939
BseDI	CCNNGG	5 cut(s)	161, 626, 956, 1765, 1961
BseGI	GGATG	4 cut(s)	1238, 1549, 1988, 2045
BseLI	CCNNNNNNNGG	3 cut(s)	242, 500, 1979
BseMII	CTCAG	3 cut(s)	623, 1627, 1830
BseNI	ACTGG	4 cut(s)	1357, 1463, 1899, 1961
BseSI	GKGCMC	1 cut(s)	976
BseXI	GCAGC	5 cut(s)	6, 96, 109, 356, 1090
BseYI	CCCAGC	2 cut(s)	1319, 1589
BsgI	GTGCAG	1 cut(s)	1707
BshNI	GGYRCC	2 cut(s)	367, 931
BshVI	ATCGAT	1 cut(s)	939
BsiSI	CCGG	1 cut(s)	161
BslFI	GGGAC	1 cut(s)	131
BslI	CCNNNNNNNGG	3 cut(s)	242, 500, 1979
BsmAI	GTCTC	2 cut(s)	200, 243
BsmBI	CGTCTC	1 cut(s)	243
BsmFI	GGGAC	1 cut(s)	131
BsmI	GAATGC	2 cut(s)	1642, 2000
Bsp119I	TTCGAA	2 cut(s)	325, 406
Bsp1286I	GDGCHC	3 cut(s)	423, 976, 1973
Bsp1407I	TGTACA	1 cut(s)	844
Bsp143I	GATC	7 cut(s)	271, 291, 630, 1323, 1363, 1643, 2017
Bsp19I	CCATGG	1 cut(s)	626
BspACI	CCGC	5 cut(s)	79, 363, 886, 1823, 1871
BspCNI	CTCAG	3 cut(s)	622, 1626, 1829
BspDI	ATCGAT	1 cut(s)	939
BspHI	TCATGA	1 cut(s)	229
BspLI	GGNNCC	4 cut(s)	369, 772, 933, 1056
BspMAI	CTGCAG	1 cut(s)	1635
BspOI	GCTAGC	1 cut(s)	597
BspPI	GGATC	4 cut(s)	638, 1331, 1651, 2012
BspQI	GCTCTTC	1 cut(s)	1961
BspT104I	TTCGAA	2 cut(s)	325, 406
BspT107I	GGYRCC	2 cut(s)	367, 931
BspTI	CTTAAG	1 cut(s)	980
BsrBI	CCGCTC	1 cut(s)	81
BsrGI	TGTACA	1 cut(s)	844
BsrI	ACTGG	4 cut(s)	1357, 1463, 1899, 1961
BssECI	CCNNGG	5 cut(s)	161, 626, 956, 1765, 1961
BssMI	GATC	7 cut(s)	271, 291, 630, 1323, 1363, 1643, 2017
BssNAI	GTATAC	1 cut(s)	1407
BssT1I	CCWWGG	4 cut(s)	626, 956, 1765, 1961
Bst1107I	GTATAC	1 cut(s)	1407
Bst2UI	CCWGG	3 cut(s)	243, 750, 1875
Bst6I	CTCTTC	3 cut(s)	1059, 1093, 1961
BstAFI	CTTAAG	1 cut(s)	980
BstAPI	GCANNNNNTGC	2 cut(s)	388, 1103
BstAUI	TGTACA	1 cut(s)	844
BstBI	TTCGAA	2 cut(s)	325, 406
BstC8I	GCNNGC	3 cut(s)	595, 792, 1547
BstDEI	CTNAG	3 cut(s)	609, 1613, 1816
BstDSI	CCRYGG	1 cut(s)	626
BstENI	CCTNNNNNAGG	1 cut(s)	498
BstF5I	GGATG	4 cut(s)	1238, 1549, 1988, 2045
BstKTI	GATC	7 cut(s)	274, 294, 633, 1326, 1366, 1646, 2020
BstMAI	GTCTC	2 cut(s)	200, 243
BstMBI	GATC	7 cut(s)	271, 291, 630, 1323, 1363, 1643, 2017
BstMWI	GCNNNNNNNGC	6 cut(s)	28, 75, 388, 599, 1103, 1499
BstNI	CCWGG	3 cut(s)	243, 750, 1875
BstNSI	RCATGY	4 cut(s)	439, 678, 862, 1101
BstSCI	CCNGG	4 cut(s)	160, 241, 748, 1873
BstSFI	CTRYAG	4 cut(s)	813, 1212, 1251, 1631
BstSLI	GKGCMC	1 cut(s)	976
BstV1I	GCAGC	5 cut(s)	6, 96, 109, 356, 1090
BstX2I	RGATCY	1 cut(s)	1323
BstXI	CCANNNNNNTGG	1 cut(s)	836
BstYI	RGATCY	1 cut(s)	1323
BstZ17I	GTATAC	1 cut(s)	1407
Bsu15I	ATCGAT	1 cut(s)	939
BsuI	GTATCC	2 cut(s)	50, 533
BsuTUI	ATCGAT	1 cut(s)	939
BtgI	CCRYGG	1 cut(s)	626
BtgZI	GCGATG	1 cut(s)	167
BtrI	CACGTC	1 cut(s)	1845
BtsCI	GGATG	4 cut(s)	1238, 1549, 1988, 2045
BtsI	GCAGTG	1 cut(s)	847
BtsIMutI	CAGTG	6 cut(s)	396, 590, 847, 1036, 1389, 1470
Cac8I	GCNNGC	3 cut(s)	595, 792, 1547
CaiI	CAGNNNCTG	1 cut(s)	662
CciI	TCATGA	1 cut(s)	229
Cfr13I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
ClaI	ATCGAT	1 cut(s)	939
CseI	GACGC	1 cut(s)	311
Csp6I	GTAC	4 cut(s)	355, 368, 845, 1707
CviQI	GTAC	4 cut(s)	355, 368, 845, 1707
DdeI	CTNAG	3 cut(s)	609, 1613, 1816
DpnI	GATC	7 cut(s)	273, 293, 632, 1325, 1365, 1645, 2019
DpnII	GATC	7 cut(s)	271, 291, 630, 1323, 1363, 1643, 2017
DraI	TTTAAA	2 cut(s)	760, 1566
DraIII	CACNNNGTG	1 cut(s)	48
DriI	GACNNNNNGTC	1 cut(s)	1626
EaeI	YGGCCR	3 cut(s)	97, 158, 883
Eam1104I	CTCTTC	3 cut(s)	1059, 1093, 1961
Eam1105I	GACNNNNNGTC	1 cut(s)	1626
EarI	CTCTTC	3 cut(s)	1059, 1093, 1961
EciI	GGCGGA	1 cut(s)	1860
Eco130I	CCWWGG	4 cut(s)	626, 956, 1765, 1961
Eco24I	GRGCYC	2 cut(s)	423, 1973
Eco47I	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
Eco57I	CTGAAG	3 cut(s)	816, 876, 1604
EcoNI	CCTNNNNNAGG	1 cut(s)	498
EcoO109I	RGGNCCY	1 cut(s)	1055
EcoRII	CCWGG	3 cut(s)	241, 748, 1873
EcoT14I	CCWWGG	4 cut(s)	626, 956, 1765, 1961
EcoT38I	GRGCYC	2 cut(s)	423, 1973
ErhI	CCWWGG	4 cut(s)	626, 956, 1765, 1961
Esp3I	CGTCTC	1 cut(s)	243
FaqI	GGGAC	1 cut(s)	131
FauI	CCCGC	2 cut(s)	356, 1830
FauNDI	CATATG	1 cut(s)	211
FblI	GTMKAC	1 cut(s)	1406
Fnu4HI	GCNGC	7 cut(s)	20, 79, 110, 123, 345, 886, 1104
FokI	GGATG	4 cut(s)	1225, 1536, 1995, 2052
FriOI	GRGCYC	2 cut(s)	423, 1973
Fsp4HI	GCNGC	7 cut(s)	20, 79, 110, 123, 345, 886, 1104
FspBI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962
GluI	GCNGC	7 cut(s)	20, 79, 110, 123, 345, 886, 1104
GsaI	CCCAGC	2 cut(s)	1323, 1593
GsuI	CTGGAG	3 cut(s)	225, 639, 1113
HapII	CCGG	1 cut(s)	161
HgaI	GACGC	1 cut(s)	311
HindIII	AAGCTT	1 cut(s)	482
HinfI	GANTC	4 cut(s)	319, 659, 1478, 1570
HpaII	CCGG	1 cut(s)	161
HphI	GGTGA	5 cut(s)	983, 1072, 1343, 1452, 1889
Hpy166II	GTNNAC	6 cut(s)	447, 845, 899, 1034, 1407, 1864
Hpy188I	TCNGA	7 cut(s)	174, 612, 717, 1063, 1270, 1584, 1819
Hpy188III	TCNNGA	8 cut(s)	230, 656, 1092, 1523, 1536, 1684, 1991, 2021
Hpy8I	GTNNAC	6 cut(s)	447, 845, 899, 1034, 1407, 1864
HpyAV	CCTTC	6 cut(s)	179, 694, 1068, 1567, 1579, 1877
HpyCH4IV	ACGT	2 cut(s)	452, 1844
HpyF10VI	GCNNNNNNNGC	6 cut(s)	28, 75, 388, 599, 1103, 1499
HpyF3I	CTNAG	3 cut(s)	609, 1613, 1816
HpySE526I	ACGT	2 cut(s)	452, 1844
KpnI	GGTACC	1 cut(s)	371
Kzo9I	GATC	7 cut(s)	271, 291, 630, 1323, 1363, 1643, 2017
LguI	GCTCTTC	1 cut(s)	1961
LmnI	GCTCC	2 cut(s)	658, 1094
Lsp1109I	GCAGC	5 cut(s)	6, 96, 109, 356, 1090
LweI	GCATC	4 cut(s)	640, 1274, 1541, 1558
MaeI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962
MaeII	ACGT	2 cut(s)	452, 1844
MaeIII	GTNAC	5 cut(s)	677, 692, 1010, 1234, 1798
MalI	GATC	7 cut(s)	273, 293, 632, 1325, 1365, 1645, 2019
MbiI	CCGCTC	1 cut(s)	81
MboI	GATC	7 cut(s)	271, 291, 630, 1323, 1363, 1643, 2017
MfeI	CAATTG	1 cut(s)	1710
MflI	RGATCY	1 cut(s)	1323
MhlI	GDGCHC	3 cut(s)	423, 976, 1973
MlsI	TGGCCA	1 cut(s)	99
MluNI	TGGCCA	1 cut(s)	99
MlyI	GAGTC	2 cut(s)	668, 1579
Mox20I	TGGCCA	1 cut(s)	99
MscI	TGGCCA	1 cut(s)	99
MslI	CAYNNNNRTG	3 cut(s)	1981, 1983, 2059
Msp20I	TGGCCA	1 cut(s)	99
MspA1I	CMGCKG	1 cut(s)	794
MspCI	CTTAAG	1 cut(s)	980
MspI	CCGG	1 cut(s)	161
MspR9I	CCNGG	4 cut(s)	162, 243, 750, 1875
MunI	CAATTG	1 cut(s)	1710
Mva1269I	GAATGC	2 cut(s)	1642, 2000
MvaI	CCWGG	3 cut(s)	243, 750, 1875
MwoI	GCNNNNNNNGC	6 cut(s)	28, 75, 388, 599, 1103, 1499
NciI	CCSGG	1 cut(s)	162
NcoI	CCATGG	1 cut(s)	626
NdeI	CATATG	1 cut(s)	211
NdeII	GATC	7 cut(s)	271, 291, 630, 1323, 1363, 1643, 2017
NheI	GCTAGC	1 cut(s)	593
NlaIV	GGNNCC	4 cut(s)	369, 772, 933, 1056
NmuCI	GTSAC	2 cut(s)	692, 1010
NspI	RCATGY	4 cut(s)	439, 678, 862, 1101
NspV	TTCGAA	2 cut(s)	325, 406
PagI	TCATGA	1 cut(s)	229
PciI	ACATGT	2 cut(s)	674, 858
PciSI	GCTCTTC	1 cut(s)	1961
PctI	GAATGC	2 cut(s)	1642, 2000
PfeI	GAWTC	2 cut(s)	319, 1478
PkrI	GCNGC	7 cut(s)	21, 80, 111, 124, 346, 887, 1105
PleI	GAGTC	2 cut(s)	667, 1578
PpsI	GAGTC	2 cut(s)	667, 1578
PpuMI	RGGWCCY	1 cut(s)	1055
PscI	ACATGT	2 cut(s)	674, 858
PsiI	TTATAA	1 cut(s)	908
Psp1406I	AACGTT	1 cut(s)	452
Psp5II	RGGWCCY	1 cut(s)	1055
Psp6I	CCWGG	3 cut(s)	241, 748, 1873
PspFI	CCCAGC	2 cut(s)	1319, 1589
PspGI	CCWGG	3 cut(s)	241, 748, 1873
PspN4I	GGNNCC	4 cut(s)	369, 772, 933, 1056
PspPI	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
PspPPI	RGGWCCY	1 cut(s)	1055
PstI	CTGCAG	1 cut(s)	1635
PstNI	CAGNNNCTG	1 cut(s)	662
PsuI	RGATCY	1 cut(s)	1323
PvuII	CAGCTG	1 cut(s)	794
RsaI	GTAC	4 cut(s)	356, 369, 846, 1708
RsaNI	GTAC	4 cut(s)	355, 368, 845, 1707
RseI	CAYNNNNRTG	3 cut(s)	1981, 1983, 2059
SapI	GCTCTTC	1 cut(s)	1961
SatI	GCNGC	7 cut(s)	20, 79, 110, 123, 345, 886, 1104
Sau3AI	GATC	7 cut(s)	271, 291, 630, 1323, 1363, 1643, 2017
Sau96I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1734, 1864
SchI	GAGTC	2 cut(s)	668, 1579
ScrFI	CCNGG	4 cut(s)	162, 243, 750, 1875
SduI	GDGCHC	3 cut(s)	423, 976, 1973
SfaNI	GCATC	4 cut(s)	640, 1274, 1541, 1558
SfcI	CTRYAG	4 cut(s)	813, 1212, 1251, 1631
SfuI	TTCGAA	2 cut(s)	325, 406
SinI	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
SmiMI	CAYNNNNRTG	3 cut(s)	1981, 1983, 2059
SmlI	CTYRAG	3 cut(s)	495, 980, 1789
SmoI	CTYRAG	3 cut(s)	495, 980, 1789
SpeI	ACTAGT	1 cut(s)	1676
SsiI	CCGC	5 cut(s)	79, 363, 886, 1823, 1871
SspMI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962
StyD4I	CCNGG	4 cut(s)	160, 241, 748, 1873
StyI	CCWWGG	4 cut(s)	626, 956, 1765, 1961
TaiI	ACGT	2 cut(s)	455, 1847
TaqI	TCGA	3 cut(s)	325, 406, 939
TatI	WGTACW	1 cut(s)	844
TauI	GCSGC	2 cut(s)	81, 888
TfiI	GAWTC	2 cut(s)	319, 1478
TscAI	CASTG	6 cut(s)	403, 590, 847, 1036, 1396, 1470
TseFI	GTSAC	2 cut(s)	692, 1010
TseI	GCWGC	5 cut(s)	19, 109, 122, 344, 1103
Tsp45I	GTSAC	2 cut(s)	692, 1010
TspGWI	ACGGA	1 cut(s)	1136
TspRI	CASTG	6 cut(s)	403, 590, 847, 1036, 1396, 1470
Vha464I	CTTAAG	1 cut(s)	980
VpaK11BI	GGWCC	5 cut(s)	503, 899, 1055, 1734, 1864
XagI	CCTNNNNNAGG	1 cut(s)	498
XapI	RAATTY	5 cut(s)	281, 729, 877, 1382, 2012
XceI	RCATGY	4 cut(s)	439, 678, 862, 1101
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2058
XmaJI	CCTAGG	2 cut(s)	1765, 1961
XmiI	GTMKAC	1 cut(s)	1406
XspI	CTAG	7 cut(s)	11, 167, 594, 995, 1677, 1766, 1962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.