Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008528.1

Orthogroup ID

OG0007701

Physical Location & Seq

Genomic Coordinates Forward (+)

50690 .. 59802

Gene Structure 9113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008528.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

atgaagatactagcttggctgctttctttgctactgtgcttcacattgtgtttgggatacaatgtgagctacgacagccgctctttgataatcaatggccaaagaaagctgctcatttctgctgccattcactaccctcgtagtgtccctgcgatgtggccggggctagttcagacggcgaaagaaggaggggttgatgtgattgagacatatgtgttttggaatggtcatgaaccgtctccaggcaattattattttggaggacgatatgatctggtcaaatttgcgaagatcgtggaggatgctggaatgtatttgattcttcgaattggcccattcgttgcagcagaatggtactttggcggggtacctgtgtggttgcattatgtgcctgacactgtatttcgaactgacaatgagccctttaagtatcacatgcagaagttcacaacgttcatagttaatctaatgaaacaggagaagctttttgcacctcaaggaggtccaattattttggcccagatagaaaatgaatatggatactacgaaaaagattatggagaggggggcaaaaaatatgcacagtggtctgctagtatggctgttgctcagaatataggtgtgccatggatcatgtgccaacagtttgatgctccagagtctgtgataaatacatgtaactccttctactgtgaccaatttactcctatttttccgaacaaacctaaaatttggacagagaattggcctggctggtttaaaacatttggggccagaaatcctcacaggccagctgaagatattgctttttctgtagctcgttttttccaaaaaggtggcagtgtacaaaattactacatgtatcatggaggaacaaattttggtcgcacttcaggtggaccatttataaccacaagttatgactatgaggcaccaatcgatgaatatggattaccaaggcttccaaaatgggcacatcttaagcaacttcacctagcaattaagttatgtgagcatgctttgctcaacagtgaacccactcatgtatcgttgggtccttcggaagaggctgatgttttcaccaactcttctggagcatgtgctgcctttatttctaatacggacgacaaaaatgacaaaacagtagtatttcgtaatgtgtcacatcatctaccagcatggtcagttagcatactgcctgactgcaagactgtagtattcaacacagcaaaggtaacatcccaaacctctgtagttgagatggcatctgaaaataaaggcttgaaaggtcttaaatgggaggtatttgtggagaaagctgggatctgggcgttcttaaagaaaggaagctcgccagttcttctaattgaatcaaaaggccatgctctccatgcttttgtcaatgatgaacttcaagatagtgcatctggaaatggcacgcatccacccttcactttaaagagtcctatgtctctgacggcagggaagaatgaaattgctctactcagtatgacagttggtctgcagaatgcgggatcattttatgagtgggtaggggcaggattaactagtgtcaagattaagggtttcaacaatggtacaattgatttgtctgcacataattggacctacaagattggggtgcaaggagaacacctaggactttacaagaaagatggctcaagtaatgtaacttgggtttcaacctcagacccgccaaagaaacaacctttgacgtggtataaggctattgtggaccctccgccaggtgatgaacctattggactggatatgattgacatgggaaaaggtctggcttggttgaatggagaagaaattggaagatactggcctaggaagagccctacacatggatgtgttcaagaatgcaattatagaggaaaatttgatccagacaaatgcaatacaggatgtggagaaccaacacagagatggtaccatgttccacggtcttggttcaaaccatctggaaacgttctggtgatatttgaggagaaaggtggagatccattgaaaattgagttttcgagacggaaaatctcaggtgcctgtgctcatgctgcagtagattacccctctgttgaccttgaatcttggcgtgaggaaaatggaactaacaaaagcatttcaaccattaacttgaagtgccctgagaacacacgtatatctactgtaaaatttgccagctttggaaatcctacaggctcctgtggatcctacaccaaaggtgactgccacgatcctaactccacttctgtggttgaaaagatatgcttaaaccaaaacaaatgtgccattgaattggcagaagagaaatttagtaagggtttgtgtccgagtgtaacgaagaagcttgcagttgaagtagtgtgcggctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009505 GO:0009628 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

799

Amino Acids

88.76

Weight (kDa)

7.25

Isoelectric Point (pI)

36.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63810
fragaria_vesca	FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130
malus_domestica	MD15G1136400.v1.1
prunus_persica	Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1
pyrus_communis	pycom15g12300
rosa_chinensis	RchiOBHm_Chr2g0122791
rosa_laevigata	RLG00000018715
rosa_multiflora	Rmu_sc0008528.1_g000013 Rmu_sc0037008.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121170
rosa_rugosa	Rorug02G0242600 Rorug02G0242700 Rorug02G0242700
rosa_samantha	Rh2AG301300 Rh2BG308700 Rh2CG287400 Rh2DG325500
rosa_wichuraiana	Rw2G023890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	908
Acc65I	GGTACC	2 cut(s)	367, 1956
AccB1I	GGYRCC	4 cut(s)	367, 931, 1956, 2066
AccBSI	CCGCTC	1 cut(s)	81
AciI	CCGC	6 cut(s)	79, 363, 1532, 1715, 1763, 2394
AclI	AACGTT	2 cut(s)	452, 1995
AclWI	GGATC	8 cut(s)	638, 1331, 1543, 1904, 2021, 2229, 2242, 2255
AcoI	YGGCCR	2 cut(s)	97, 158
AcsI	RAATTY	6 cut(s)	281, 729, 877, 1904, 2198, 2336
AcuI	CTGAAG	2 cut(s)	816, 876
AdeI	CACNNNGTG	1 cut(s)	48
AfaI	GTAC	5 cut(s)	356, 369, 846, 1600, 1958
AfiI	CCNNNNNNNGG	4 cut(s)	242, 500, 1766, 1871
AflII	CTTAAG	1 cut(s)	980
AflIII	ACRYGT	3 cut(s)	674, 858, 2180
AhdI	GACNNNNNGTC	1 cut(s)	1518
AhlI	ACTAGT	1 cut(s)	1568
AjiI	CACGTC	1 cut(s)	1737
AjnI	CCWGG	3 cut(s)	241, 748, 1765
AjuI	GAANNNNNNNTTGG	2 cut(s)	342, 374
AleI	CACNNNNGTG	1 cut(s)	2276
Alw21I	GWGCWC	1 cut(s)	2077
Alw26I	GTCTC	4 cut(s)	200, 243, 1476, 2044
AlwI	GGATC	8 cut(s)	638, 1331, 1543, 1904, 2021, 2229, 2242, 2255
AlwNI	CAGNNNCTG	1 cut(s)	662
AoxI	GGCC	9 cut(s)	97, 158, 331, 516, 746, 771, 788, 1378, 1850
ApeKI	GCWGC	6 cut(s)	19, 109, 122, 344, 1103, 2081
ApoI	RAATTY	6 cut(s)	281, 729, 877, 1904, 2198, 2336
Asp718I	GGTACC	2 cut(s)	367, 1956
AspA2I	CCTAGG	2 cut(s)	1657, 1853
AspS9I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1626, 1756
AsuC2I	CCSGG	1 cut(s)	162
AsuHPI	GGTGA	5 cut(s)	983, 1072, 1781, 2014, 2261
AsuII	TTCGAA	2 cut(s)	325, 406
AvaII	GGWCC	5 cut(s)	503, 899, 1055, 1626, 1756
AvrII	CCTAGG	2 cut(s)	1657, 1853
BaeGI	GKGCMC	2 cut(s)	976, 2171
BaeI	ACNNNNGTAYC	4 cut(s)	359, 392, 1029, 1062
BalI	TGGCCA	1 cut(s)	99
BamHI	GGATCC	1 cut(s)	2234
BanI	GGYRCC	4 cut(s)	367, 931, 1956, 2066
BanII	GRGCYC	2 cut(s)	423, 1865
Bbv12I	GWGCWC	1 cut(s)	2077
BbvI	GCAGC	6 cut(s)	6, 96, 109, 356, 1090, 2068
BccI	CCATC	4 cut(s)	1255, 1670, 1947, 1993
BceAI	ACGGC	2 cut(s)	192, 1494
BciT130I	CCWGG	3 cut(s)	243, 750, 1767
BciVI	GTATCC	2 cut(s)	50, 533
BcnI	CCSGG	1 cut(s)	162
BcoDI	GTCTC	4 cut(s)	200, 243, 1476, 2044
BcuI	ACTAGT	1 cut(s)	1568
BfaI	CTAG	7 cut(s)	11, 167, 594, 995, 1569, 1658, 1854
BfmI	CTRYAG	6 cut(s)	813, 1212, 1251, 1523, 2082, 2220
BfrI	CTTAAG	1 cut(s)	980
BfuI	GTATCC	2 cut(s)	50, 533
BisI	GCNGC	8 cut(s)	20, 79, 110, 123, 345, 1104, 2082, 2395
BlnI	CCTAGG	2 cut(s)	1657, 1853
BlsI	GCNGC	8 cut(s)	21, 80, 111, 124, 346, 1105, 2083, 2396
Bme1390I	CCNGG	4 cut(s)	162, 243, 750, 1767
Bme18I	GGWCC	5 cut(s)	503, 899, 1055, 1626, 1756
BmeRI	GACNNNNNGTC	1 cut(s)	1518
BmgBI	CACGTC	1 cut(s)	1737
BmgT120I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1626, 1756
BmiI	GGNNCC	9 cut(s)	369, 772, 933, 1056, 1758, 1958, 2068, 2227, 2236
BmrFI	CCNGG	4 cut(s)	162, 243, 750, 1767
BmsI	GCATC	5 cut(s)	292, 640, 1274, 1433, 1450
BpmI	CTGGAG	3 cut(s)	225, 639, 1113
Bpu14I	TTCGAA	2 cut(s)	325, 406
BpuEI	CTTGAG	2 cut(s)	480, 1666
BpuMI	CCSGG	1 cut(s)	162
Bsa29I	ATCGAT	1 cut(s)	939
BsaAI	YACGTR	1 cut(s)	2183
BsaJI	CCNNGG	6 cut(s)	161, 626, 956, 1657, 1853, 1967
Bsc4I	CCNNNNNNNGG	4 cut(s)	242, 500, 1766, 1871
Bse1I	ACTGG	3 cut(s)	1355, 1791, 1853
BseBI	CCWGG	3 cut(s)	243, 750, 1767
BseCI	ATCGAT	1 cut(s)	939
BseDI	CCNNGG	6 cut(s)	161, 626, 956, 1657, 1853, 1967
BseGI	GGATG	5 cut(s)	307, 1238, 1441, 1880, 1937
BseLI	CCNNNNNNNGG	4 cut(s)	242, 500, 1766, 1871
BseMII	CTCAG	5 cut(s)	623, 1519, 1722, 2076, 2163
BseNI	ACTGG	3 cut(s)	1355, 1791, 1853
BseRI	GAGGAG	1 cut(s)	2027
BseSI	GKGCMC	2 cut(s)	976, 2171
BseXI	GCAGC	6 cut(s)	6, 96, 109, 356, 1090, 2068
BseYI	CCCAGC	1 cut(s)	1319
BsgI	GTGCAG	1 cut(s)	1599
BshFI	GGCC	9 cut(s)	99, 160, 333, 518, 748, 773, 790, 1380, 1852
BshNI	GGYRCC	4 cut(s)	367, 931, 1956, 2066
BshVI	ATCGAT	1 cut(s)	939
BsiHKAI	GWGCWC	1 cut(s)	2077
BsiSI	CCGG	1 cut(s)	161
BslFI	GGGAC	1 cut(s)	131
BslI	CCNNNNNNNGG	4 cut(s)	242, 500, 1766, 1871
BsmAI	GTCTC	4 cut(s)	200, 243, 1476, 2044
BsmBI	CGTCTC	2 cut(s)	243, 2044
BsmFI	GGGAC	1 cut(s)	131
BsmI	GAATGC	2 cut(s)	1534, 1892
BsnI	GGCC	9 cut(s)	99, 160, 333, 518, 748, 773, 790, 1380, 1852
Bsp119I	TTCGAA	2 cut(s)	325, 406
Bsp1286I	GDGCHC	5 cut(s)	423, 976, 1865, 2077, 2171
Bsp1407I	TGTACA	1 cut(s)	844
Bsp143I	GATC	9 cut(s)	271, 291, 630, 1323, 1535, 1909, 2026, 2234, 2260
Bsp19I	CCATGG	1 cut(s)	626
BspACI	CCGC	6 cut(s)	79, 363, 1532, 1715, 1763, 2394
BspANI	GGCC	9 cut(s)	99, 160, 333, 518, 748, 773, 790, 1380, 1852
BspCNI	CTCAG	5 cut(s)	622, 1518, 1721, 2075, 2164
BspDI	ATCGAT	1 cut(s)	939
BspHI	TCATGA	1 cut(s)	229
BspLI	GGNNCC	9 cut(s)	369, 772, 933, 1056, 1758, 1958, 2068, 2227, 2236
BspMAI	CTGCAG	2 cut(s)	1527, 2086
BspPI	GGATC	8 cut(s)	638, 1331, 1543, 1904, 2021, 2229, 2242, 2255
BspQI	GCTCTTC	1 cut(s)	1853
BspT104I	TTCGAA	2 cut(s)	325, 406
BspT107I	GGYRCC	4 cut(s)	367, 931, 1956, 2066
BspTI	CTTAAG	1 cut(s)	980
BsrBI	CCGCTC	1 cut(s)	81
BsrGI	TGTACA	1 cut(s)	844
BsrI	ACTGG	3 cut(s)	1355, 1791, 1853
BssECI	CCNNGG	6 cut(s)	161, 626, 956, 1657, 1853, 1967
BssMI	GATC	9 cut(s)	271, 291, 630, 1323, 1535, 1909, 2026, 2234, 2260
BssT1I	CCWWGG	4 cut(s)	626, 956, 1657, 1853
Bst2UI	CCWGG	3 cut(s)	243, 750, 1767
Bst6I	CTCTTC	4 cut(s)	1059, 1093, 1853, 2325
BstAFI	CTTAAG	1 cut(s)	980
BstAPI	GCANNNNNTGC	3 cut(s)	388, 1021, 1103
BstAUI	TGTACA	1 cut(s)	844
BstBAI	YACGTR	1 cut(s)	2183
BstBI	TTCGAA	2 cut(s)	325, 406
BstC8I	GCNNGC	6 cut(s)	792, 1017, 1352, 1439, 2206, 2376
BstDEI	CTNAG	5 cut(s)	609, 1505, 1708, 2062, 2172
BstDSI	CCRYGG	2 cut(s)	626, 1967
BstENI	CCTNNNNNAGG	2 cut(s)	498, 1764
BstF5I	GGATG	5 cut(s)	307, 1238, 1441, 1880, 1937
BstKTI	GATC	9 cut(s)	274, 294, 633, 1326, 1538, 1912, 2029, 2237, 2263
BstMAI	GTCTC	4 cut(s)	200, 243, 1476, 2044
BstMBI	GATC	9 cut(s)	271, 291, 630, 1323, 1535, 1909, 2026, 2234, 2260
BstMWI	GCNNNNNNNGC	8 cut(s)	28, 75, 388, 599, 1021, 1103, 1391, 2081
BstNI	CCWGG	3 cut(s)	243, 750, 1767
BstNSI	RCATGY	5 cut(s)	439, 678, 862, 1019, 1101
BstSCI	CCNGG	4 cut(s)	160, 241, 748, 1765
BstSFI	CTRYAG	6 cut(s)	813, 1212, 1251, 1523, 2082, 2220
BstSLI	GKGCMC	2 cut(s)	976, 2171
BstV1I	GCAGC	6 cut(s)	6, 96, 109, 356, 1090, 2068
BstX2I	RGATCY	3 cut(s)	1323, 2026, 2234
BstXI	CCANNNNNNTGG	4 cut(s)	836, 1974, 2278, 2323
BstYI	RGATCY	3 cut(s)	1323, 2026, 2234
Bsu15I	ATCGAT	1 cut(s)	939
BsuI	GTATCC	2 cut(s)	50, 533
BsuRI	GGCC	9 cut(s)	99, 160, 333, 518, 748, 773, 790, 1380, 1852
BsuTUI	ATCGAT	1 cut(s)	939
BtgI	CCRYGG	2 cut(s)	626, 1967
BtgZI	GCGATG	1 cut(s)	167
BtrI	CACGTC	1 cut(s)	1737
BtsCI	GGATG	5 cut(s)	307, 1238, 1441, 1880, 1937
BtsI	GCAGTG	1 cut(s)	847
BtsIMutI	CAGTG	4 cut(s)	396, 590, 847, 1036
Cac8I	GCNNGC	6 cut(s)	792, 1017, 1352, 1439, 2206, 2376
CaiI	CAGNNNCTG	1 cut(s)	662
CciI	TCATGA	1 cut(s)	229
Cfr13I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1626, 1756
ClaI	ATCGAT	1 cut(s)	939
Csp6I	GTAC	5 cut(s)	355, 368, 845, 1599, 1957
CviQI	GTAC	5 cut(s)	355, 368, 845, 1599, 1957
DdeI	CTNAG	5 cut(s)	609, 1505, 1708, 2062, 2172
DpnI	GATC	9 cut(s)	273, 293, 632, 1325, 1537, 1911, 2028, 2236, 2262
DpnII	GATC	9 cut(s)	271, 291, 630, 1323, 1535, 1909, 2026, 2234, 2260
DraI	TTTAAA	2 cut(s)	760, 1458
DraIII	CACNNNGTG	1 cut(s)	48
DriI	GACNNNNNGTC	1 cut(s)	1518
EaeI	YGGCCR	2 cut(s)	97, 158
Eam1104I	CTCTTC	4 cut(s)	1059, 1093, 1853, 2325
Eam1105I	GACNNNNNGTC	1 cut(s)	1518
EarI	CTCTTC	4 cut(s)	1059, 1093, 1853, 2325
EciI	GGCGGA	1 cut(s)	1752
Eco130I	CCWWGG	4 cut(s)	626, 956, 1657, 1853
Eco24I	GRGCYC	2 cut(s)	423, 1865
Eco47I	GGWCC	5 cut(s)	503, 899, 1055, 1626, 1756
Eco57I	CTGAAG	2 cut(s)	816, 876
EcoNI	CCTNNNNNAGG	2 cut(s)	498, 1764
EcoO109I	RGGNCCY	1 cut(s)	1055
EcoRII	CCWGG	3 cut(s)	241, 748, 1765
EcoT14I	CCWWGG	4 cut(s)	626, 956, 1657, 1853
EcoT38I	GRGCYC	2 cut(s)	423, 1865
ErhI	CCWWGG	4 cut(s)	626, 956, 1657, 1853
Esp3I	CGTCTC	2 cut(s)	243, 2044
FalI	AAGNNNNNCTT	2 cut(s)	2279, 2311
FaqI	GGGAC	1 cut(s)	131
FauI	CCCGC	3 cut(s)	356, 1525, 1722
FauNDI	CATATG	1 cut(s)	211
Fnu4HI	GCNGC	8 cut(s)	20, 79, 110, 123, 345, 1104, 2082, 2395
FokI	GGATG	5 cut(s)	314, 1225, 1428, 1887, 1944
FriOI	GRGCYC	2 cut(s)	423, 1865
Fsp4HI	GCNGC	8 cut(s)	20, 79, 110, 123, 345, 1104, 2082, 2395
FspBI	CTAG	7 cut(s)	11, 167, 594, 995, 1569, 1658, 1854
GluI	GCNGC	8 cut(s)	20, 79, 110, 123, 345, 1104, 2082, 2395
GsaI	CCCAGC	1 cut(s)	1323
GsuI	CTGGAG	3 cut(s)	225, 639, 1113
HaeIII	GGCC	9 cut(s)	99, 160, 333, 518, 748, 773, 790, 1380, 1852
HapII	CCGG	1 cut(s)	161
HincII	GTYRAC	1 cut(s)	2104
HindII	GTYRAC	1 cut(s)	2104
HindIII	AAGCTT	2 cut(s)	482, 2372
HinfI	GANTC	5 cut(s)	319, 659, 1370, 1462, 2111
HpaII	CCGG	1 cut(s)	161
HphI	GGTGA	5 cut(s)	983, 1072, 1781, 2014, 2261
Hpy166II	GTNNAC	6 cut(s)	447, 845, 899, 1034, 1756, 2104
Hpy188I	TCNGA	8 cut(s)	174, 612, 717, 1063, 1270, 1476, 1711, 2358
Hpy8I	GTNNAC	6 cut(s)	447, 845, 899, 1034, 1756, 2104
HpyAV	CCTTC	4 cut(s)	179, 694, 1068, 1459
HpyCH4IV	ACGT	4 cut(s)	452, 1736, 1995, 2182
HpyF10VI	GCNNNNNNNGC	8 cut(s)	28, 75, 388, 599, 1021, 1103, 1391, 2081
HpyF3I	CTNAG	5 cut(s)	609, 1505, 1708, 2062, 2172
HpySE526I	ACGT	4 cut(s)	452, 1736, 1995, 2182
KpnI	GGTACC	2 cut(s)	371, 1960
Kzo9I	GATC	9 cut(s)	271, 291, 630, 1323, 1535, 1909, 2026, 2234, 2260
LguI	GCTCTTC	1 cut(s)	1853
LmnI	GCTCC	3 cut(s)	658, 1094, 2231
Lsp1109I	GCAGC	6 cut(s)	6, 96, 109, 356, 1090, 2068
LweI	GCATC	5 cut(s)	292, 640, 1274, 1433, 1450
MaeI	CTAG	7 cut(s)	11, 167, 594, 995, 1569, 1658, 1854
MaeII	ACGT	4 cut(s)	452, 1736, 1995, 2182
MaeIII	GTNAC	7 cut(s)	677, 692, 1161, 1234, 1690, 2249, 2362
MalI	GATC	9 cut(s)	273, 293, 632, 1325, 1537, 1911, 2028, 2236, 2262
MbiI	CCGCTC	1 cut(s)	81
MboI	GATC	9 cut(s)	271, 291, 630, 1323, 1535, 1909, 2026, 2234, 2260
MfeI	CAATTG	1 cut(s)	1602
MflI	RGATCY	3 cut(s)	1323, 2026, 2234
MhlI	GDGCHC	5 cut(s)	423, 976, 1865, 2077, 2171
MlsI	TGGCCA	1 cut(s)	99
MluNI	TGGCCA	1 cut(s)	99
MlyI	GAGTC	2 cut(s)	668, 1471
Mox20I	TGGCCA	1 cut(s)	99
MscI	TGGCCA	1 cut(s)	99
MslI	CAYNNNNRTG	4 cut(s)	1873, 1875, 1951, 2276
Msp20I	TGGCCA	1 cut(s)	99
MspA1I	CMGCKG	1 cut(s)	794
MspCI	CTTAAG	1 cut(s)	980
MspI	CCGG	1 cut(s)	161
MspR9I	CCNGG	4 cut(s)	162, 243, 750, 1767
MunI	CAATTG	1 cut(s)	1602
Mva1269I	GAATGC	2 cut(s)	1534, 1892
MvaI	CCWGG	3 cut(s)	243, 750, 1767
MwoI	GCNNNNNNNGC	8 cut(s)	28, 75, 388, 599, 1021, 1103, 1391, 2081
NciI	CCSGG	1 cut(s)	162
NcoI	CCATGG	1 cut(s)	626
NdeI	CATATG	1 cut(s)	211
NdeII	GATC	9 cut(s)	271, 291, 630, 1323, 1535, 1909, 2026, 2234, 2260
NlaIV	GGNNCC	9 cut(s)	369, 772, 933, 1056, 1758, 1958, 2068, 2227, 2236
NmuCI	GTSAC	3 cut(s)	692, 1161, 2249
NspI	RCATGY	5 cut(s)	439, 678, 862, 1019, 1101
NspV	TTCGAA	2 cut(s)	325, 406
OliI	CACNNNNGTG	1 cut(s)	2276
PaeI	GCATGC	1 cut(s)	1019
PagI	TCATGA	1 cut(s)	229
PciI	ACATGT	2 cut(s)	674, 858
PciSI	GCTCTTC	1 cut(s)	1853
PctI	GAATGC	2 cut(s)	1534, 1892
PfeI	GAWTC	3 cut(s)	319, 1370, 2111
PkrI	GCNGC	8 cut(s)	21, 80, 111, 124, 346, 1105, 2083, 2396
PleI	GAGTC	2 cut(s)	667, 1470
PpsI	GAGTC	2 cut(s)	667, 1470
Ppu21I	YACGTR	1 cut(s)	2183
PpuMI	RGGWCCY	1 cut(s)	1055
PscI	ACATGT	2 cut(s)	674, 858
PsiI	TTATAA	1 cut(s)	908
Psp1406I	AACGTT	2 cut(s)	452, 1995
Psp5II	RGGWCCY	1 cut(s)	1055
Psp6I	CCWGG	3 cut(s)	241, 748, 1765
PspFI	CCCAGC	1 cut(s)	1319
PspGI	CCWGG	3 cut(s)	241, 748, 1765
PspN4I	GGNNCC	9 cut(s)	369, 772, 933, 1056, 1758, 1958, 2068, 2227, 2236
PspPI	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1626, 1756
PspPPI	RGGWCCY	1 cut(s)	1055
PstI	CTGCAG	2 cut(s)	1527, 2086
PstNI	CAGNNNCTG	1 cut(s)	662
PsuI	RGATCY	3 cut(s)	1323, 2026, 2234
PvuII	CAGCTG	1 cut(s)	794
RsaI	GTAC	5 cut(s)	356, 369, 846, 1600, 1958
RsaNI	GTAC	5 cut(s)	355, 368, 845, 1599, 1957
RseI	CAYNNNNRTG	4 cut(s)	1873, 1875, 1951, 2276
SapI	GCTCTTC	1 cut(s)	1853
SatI	GCNGC	8 cut(s)	20, 79, 110, 123, 345, 1104, 2082, 2395
Sau3AI	GATC	9 cut(s)	271, 291, 630, 1323, 1535, 1909, 2026, 2234, 2260
Sau96I	GGNCC	8 cut(s)	332, 503, 517, 771, 899, 1055, 1626, 1756
SchI	GAGTC	2 cut(s)	668, 1471
ScrFI	CCNGG	4 cut(s)	162, 243, 750, 1767
SduI	GDGCHC	5 cut(s)	423, 976, 1865, 2077, 2171
SfaNI	GCATC	5 cut(s)	292, 640, 1274, 1433, 1450
SfcI	CTRYAG	6 cut(s)	813, 1212, 1251, 1523, 2082, 2220
SfuI	TTCGAA	2 cut(s)	325, 406
SinI	GGWCC	5 cut(s)	503, 899, 1055, 1626, 1756
SmiMI	CAYNNNNRTG	4 cut(s)	1873, 1875, 1951, 2276
SmlI	CTYRAG	3 cut(s)	495, 980, 1681
SmoI	CTYRAG	3 cut(s)	495, 980, 1681
SpeI	ACTAGT	1 cut(s)	1568
SphI	GCATGC	1 cut(s)	1019
SsiI	CCGC	6 cut(s)	79, 363, 1532, 1715, 1763, 2394
SspMI	CTAG	7 cut(s)	11, 167, 594, 995, 1569, 1658, 1854
StyD4I	CCNGG	4 cut(s)	160, 241, 748, 1765
StyI	CCWWGG	4 cut(s)	626, 956, 1657, 1853
TaiI	ACGT	4 cut(s)	455, 1739, 1998, 2185
TaqI	TCGA	4 cut(s)	325, 406, 939, 2048
TatI	WGTACW	1 cut(s)	844
TauI	GCSGC	2 cut(s)	81, 2397
TfiI	GAWTC	3 cut(s)	319, 1370, 2111
TscAI	CASTG	4 cut(s)	403, 590, 847, 1036
TseFI	GTSAC	3 cut(s)	692, 1161, 2249
TseI	GCWGC	6 cut(s)	19, 109, 122, 344, 1103, 2081
Tsp45I	GTSAC	3 cut(s)	692, 1161, 2249
TspDTI	ATGAA	9 cut(s)	17, 246, 445, 485, 546, 957, 1422, 1506, 1788
TspGWI	ACGGA	2 cut(s)	1136, 2068
TspRI	CASTG	4 cut(s)	403, 590, 847, 1036
Vha464I	CTTAAG	1 cut(s)	980
VpaK11BI	GGWCC	5 cut(s)	503, 899, 1055, 1626, 1756
XagI	CCTNNNNNAGG	2 cut(s)	498, 1764
XapI	RAATTY	6 cut(s)	281, 729, 877, 1904, 2198, 2336
XceI	RCATGY	5 cut(s)	439, 678, 862, 1019, 1101
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1950
XmaJI	CCTAGG	2 cut(s)	1657, 1853
XspI	CTAG	7 cut(s)	11, 167, 594, 995, 1569, 1658, 1854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.