Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0007701

Physical Location & Seq

Genomic Coordinates Reverse (-)

24910240 .. 24925772

Gene Structure 15533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0242600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGGTTTCCTCGGCAACTCTATTCTTCTGTTCTCATATTCTGTTACTCGCGGTCACTCAATCCCTTCCTCAGCCATCGTTTTCAGCCTATTCATGTTCCAATGGAAAAGGTAACTACACCGCTAATAGTACCTACCAAACAAATTTAGACACCCTTCTCTCCACACTAGTCTCCACCAACGGCAATGGCTATGGCTTTTACAATTCCTCCTATGCCGAAAACTCATCCAACCAAGTTTATGCAACCGGACTTTGTAGAGGAGATTTCCTGGAGGATGCTTGTCGTAGCTGCCTCAATGACTCGAGCCACAAGCTCACAGAGCTTTGTCCTAACCAAAAAGAAGCTCTCGTCTTTTATGACACTTGCATGTTACGCTACTCAAACCGATCCCTCTATGGCCTCATGGAGGATTCACCTCCTCTCTATATCGTGAGTCCAAGAAACGTAGCATTATGGGAAGTGGAAGGGTTCTTTGAAGAGCTTTGGAAGCTAATCCAAAGATTGAGCAGTGAAGCTGCAGCAGGTGGTTCACTTCGTAAGTTCGCAGTAAACAGCACAACTACTTCAGATTTAAAGACAATATATGCACAAGCGCAGTGCACGCCAGATTTGTCCGAGCAAGATTGCACTGATTGCTTGGTTGGTGCTTATGAAGACATCACAACTTACAGTTACGGGAAGGATGGGGCCAGAATTCTTAAACCAAGTTGTAACATTAGGTATGAGCCTGCTAGCTTCCTCGACCCTGCAAATGTGGCACCACTTCCATCATCGCCACCAATATCTCCGCCTTCACCATCAACCAATACTACAAATTCAGAAGAACGGAAGAAGAGTAATAATTTGCGGACTGTAATCCTTGTGGTTGTGCCAATCACTGTGTCTCTGGTACTAACTGTATGCATCTGCATTTATTTAAGAGCGAGGAAGACAGAGAAAAAACTTGATCAAAGCAAGCTTCCAGGCGCCGAAGATGCAGATGAAAGTAGAAGTGCAGAATCCTTGCAATTTGACTTTGGCACCATCAGAGTTGTTACAGATGATTTTTCTGAAGCATATAAACTCGGACAGGGCGGTTTTGGTTCTGTATACAGGGGTAAGCTTCCCAATGGAGAAGAGATAGCAGTGAAAAGGCTCTCTATGGAATCTGGACAAGGAGATTTAGAATTCAAAAATGAGGTCTTACTAGTGGCTAGGCTTCAACACAGAAATTTAGTTAGACTTCTCGGTTTCTGCTTGGAAGGAAATGAAAGGCTTCTTGTCTATGAGTATCTCCCTAACGCAAGTCTTGATAACATCATTTTTGATCCAATCAAGCGCGAACAACTGGATTGGGATAAACGTTATAAAATCATAGAAGGCATTGCTCGAGGGCTACTTTACCTTCATGTTGATTCTCGCCTTAGGATTATTCATCGTGATCTCAAAGCTAGTAACATCTTAATAGATGCAGAAATGAACCCCAAAATTTCAGATTTTGGCATGGCAAGGTTGTTTGTGCATGATGAAACACAAGGCAATACTAATCGTATTGTGGGAACCTATGGATATATGGCTCCTGAGTATGCGATGCATGGACATTTTTCCGTGAAGTCTGACGTCTATAGTTTTGGCGTGTTGATCTTGGAGATAATAAGCGGACAGAAAAATAGCTGCTTCCGTCAGGGAGAGAACATGGAGGATCTTCCAAGCTATGCATGGAAAAGCTGGAGGGAAGGAACAACTTCAAATCTAATAGATCCGACATTGACGAATGGTTCAAGAACCGAAATCATGAGATGCATTCACATTGGTTTGTTATGCGTGCAAGAAAGCATAGCTGATAGACCAACCATGACTTCAGTTATTCTCATGTTGAATAGCCACTCTCTCAGTCTCCCAGTACCCTCAGAACCAGCATTTTTTATGCATAGTAGCGTCGGATCAGACCTGTCCTTGGGATGGGAAAGTAGTTCAGGAGTAACAGCGTCCAAGAGCAACTTTGTCTCGGTCAAAGTACCTGAAAATGAGGCTGCATTAATCTCTGAAGTATATCCTCGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009505 GO:0009628 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

680

Amino Acids

75.44

Weight (kDa)

5.38

Isoelectric Point (pI)

47.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	32 - 129	2.3e-24	Salt stress response/antifungal
Stress-antifung	PF01657	157 - 242	1.5e-10	Salt stress response/antifungal
Pkinase	PF00069	351 - 556	7.2e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	354 - 616	7.9e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63810
fragaria_vesca	FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130 FvH4_1g25130
malus_domestica	MD15G1136400.v1.1
prunus_persica	Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1 Prupe.4G278500_v2.0.a1
pyrus_communis	pycom15g12300
rosa_chinensis	RchiOBHm_Chr2g0122791
rosa_laevigata	RLG00000018715
rosa_multiflora	Rmu_sc0008528.1_g000013 Rmu_sc0037008.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121170
rosa_rugosa	Rorug02G0242600 Rorug02G0242700 Rorug02G0242700
rosa_samantha	Rh2AG301300 Rh2BG308700 Rh2CG287400 Rh2DG325500
rosa_wichuraiana	Rw2G023890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1347
AarI	CACCTGC	1 cut(s)	512
AatII	GACGTC	1 cut(s)	1602
Acc36I	ACCTGC	1 cut(s)	512
AccB1I	GGYRCC	3 cut(s)	757, 965, 1019
AccI	GTMKAC	1 cut(s)	1089
AccII	CGCG	2 cut(s)	50, 1320
AciI	CCGC	6 cut(s)	50, 120, 788, 847, 1074, 1638
AclI	AACGTT	1 cut(s)	1342
AclWI	GGATC	5 cut(s)	381, 1301, 1689, 1733, 1930
AcsI	RAATTY	6 cut(s)	142, 693, 814, 1166, 1210, 1467
AcuI	CTGAAG	3 cut(s)	549, 1071, 1824
AcyI	GRCGYC	2 cut(s)	966, 1599
AfaI	GTAC	4 cut(s)	130, 891, 1884, 1998
AfiI	CCNNNNNNNGG	3 cut(s)	406, 1936, 1941
AgsI	TTSAA	6 cut(s)	476, 1171, 1202, 1728, 1761, 1858
AhlI	ACTAGT	2 cut(s)	166, 1186
AjnI	CCWGG	2 cut(s)	267, 961
AjuI	GAANNNNNNNTTGG	2 cut(s)	1822, 1854
Alw21I	GWGCWC	1 cut(s)	602
Alw26I	GTCTC	4 cut(s)	175, 888, 1880, 1990
Alw44I	GTGCAC	1 cut(s)	598
AlwI	GGATC	5 cut(s)	381, 1301, 1689, 1733, 1930
Ama87I	CYCGRG	2 cut(s)	301, 1368
AoxI	GGCC	2 cut(s)	397, 687
ApaLI	GTGCAC	1 cut(s)	598
ApeKI	GCWGC	5 cut(s)	288, 515, 518, 1653, 2012
ApoI	RAATTY	6 cut(s)	142, 693, 814, 1166, 1210, 1467
ArsI	GACNNNNNNTTYG	2 cut(s)	1164, 1196
AseI	ATTAAT	1 cut(s)	2018
Asp700I	GAANNNNTTC	2 cut(s)	1254, 1723
AspLEI	GCGC	3 cut(s)	595, 968, 1320
AspS9I	GGNCC	1 cut(s)	687
AsuHPI	GGTGA	2 cut(s)	405, 786
AsuNHI	GCTAGC	1 cut(s)	731
AvaI	CYCGRG	2 cut(s)	301, 1368
AxyI	CCTNAGG	1 cut(s)	1403
BaeGI	GKGCMC	1 cut(s)	602
BanI	GGYRCC	3 cut(s)	757, 965, 1019
BbsI	GAAGAC	2 cut(s)	660, 935
Bbv12I	GWGCWC	1 cut(s)	602
BbvCI	CCTCAGC	1 cut(s)	69
BbvI	GCAGC	5 cut(s)	275, 502, 530, 1640, 1999
BccI	CCATC	6 cut(s)	82, 677, 775, 805, 1031, 1935
BceAI	ACGGC	1 cut(s)	196
BciT130I	CCWGG	2 cut(s)	269, 963
BclI	TGATCA	1 cut(s)	946
BcoDI	GTCTC	4 cut(s)	175, 888, 1880, 1990
BcuI	ACTAGT	2 cut(s)	166, 1186
BfaI	CTAG	6 cut(s)	167, 732, 1187, 1194, 1431, 2041
BfmI	CTRYAG	2 cut(s)	516, 1603
BfoI	RGCGCY	1 cut(s)	969
BfuAI	ACCTGC	1 cut(s)	512
BisI	GCNGC	5 cut(s)	289, 516, 519, 1654, 2013
BlsI	GCNGC	5 cut(s)	290, 517, 520, 1655, 2014
Bme1390I	CCNGG	2 cut(s)	269, 963
BmeT110I	CYCGRG	2 cut(s)	301, 1368
BmgT120I	GGNCC	1 cut(s)	687
BmiI	GGNNCC	6 cut(s)	688, 759, 967, 1021, 1540, 1557
BmrFI	CCNGG	2 cut(s)	269, 963
BmrI	ACTGGG	1 cut(s)	1874
BmsI	GCATC	6 cut(s)	265, 912, 964, 1438, 1560, 1769
BmtI	GCTAGC	1 cut(s)	735
BmuI	ACTGGG	1 cut(s)	1874
BpiI	GAAGAC	2 cut(s)	660, 935
BpmI	CTGGAG	2 cut(s)	290, 1729
Bpu10I	CCTNAGC	1 cut(s)	69
BsaHI	GRCGYC	2 cut(s)	966, 1599
BsaJI	CCNNGG	2 cut(s)	9, 1935
BsaWI	WCCGGW	1 cut(s)	245
BsaXI	ACNNNNNCTCC	2 cut(s)	191, 221
Bsc4I	CCNNNNNNNGG	3 cut(s)	406, 1936, 1941
Bse1I	ACTGG	2 cut(s)	1332, 1880
Bse21I	CCTNAGG	1 cut(s)	1403
Bse3DI	GCAATG	2 cut(s)	190, 1362
BseBI	CCWGG	2 cut(s)	269, 963
BseDI	CCNNGG	2 cut(s)	9, 1935
BseGI	GGATG	4 cut(s)	224, 280, 688, 1946
BseLI	CCNNNNNNNGG	3 cut(s)	406, 1936, 1941
BseMI	GCAATG	2 cut(s)	190, 1362
BseMII	CTCAG	4 cut(s)	83, 1551, 1885, 1902
BseNI	ACTGG	2 cut(s)	1332, 1880
BseRI	GAGGAG	2 cut(s)	273, 408
BseSI	GKGCMC	1 cut(s)	602
BseXI	GCAGC	5 cut(s)	275, 502, 530, 1640, 1999
BsgI	GTGCAG	1 cut(s)	1014
Bsh1236I	CGCG	2 cut(s)	50, 1320
BshFI	GGCC	2 cut(s)	399, 689
BshNI	GGYRCC	3 cut(s)	757, 965, 1019
BsiHKAI	GWGCWC	1 cut(s)	602
BsiHKCI	CYCGRG	2 cut(s)	301, 1368
BsiSI	CCGG	1 cut(s)	246
BslI	CCNNNNNNNGG	3 cut(s)	406, 1936, 1941
BsmAI	GTCTC	4 cut(s)	175, 888, 1880, 1990
BsmI	GAATGC	1 cut(s)	1782
BsnI	GGCC	2 cut(s)	399, 689
BsoBI	CYCGRG	2 cut(s)	301, 1368
Bsp1286I	GDGCHC	1 cut(s)	602
Bsp143I	GATC	8 cut(s)	386, 946, 1306, 1420, 1620, 1681, 1738, 1922
BspACI	CCGC	6 cut(s)	50, 120, 788, 847, 1074, 1638
BspANI	GGCC	2 cut(s)	399, 689
BspCNI	CTCAG	4 cut(s)	82, 1552, 1884, 1901
BspFNI	CGCG	2 cut(s)	50, 1320
BspHI	TCATGA	1 cut(s)	1773
BspLI	GGNNCC	6 cut(s)	688, 759, 967, 1021, 1540, 1557
BspMAI	CTGCAG	1 cut(s)	520
BspMI	ACCTGC	1 cut(s)	512
BspOI	GCTAGC	1 cut(s)	735
BspPI	GGATC	5 cut(s)	381, 1301, 1689, 1733, 1930
BspQI	GCTCTTC	1 cut(s)	471
BspT107I	GGYRCC	3 cut(s)	757, 965, 1019
BsrDI	GCAATG	2 cut(s)	190, 1362
BsrI	ACTGG	2 cut(s)	1332, 1880
BssECI	CCNNGG	2 cut(s)	9, 1935
BssMI	GATC	8 cut(s)	386, 946, 1306, 1420, 1620, 1681, 1738, 1922
BssNAI	GTATAC	1 cut(s)	1090
BssNI	GRCGYC	2 cut(s)	966, 1599
BssT1I	CCWWGG	1 cut(s)	1935
Bst1107I	GTATAC	1 cut(s)	1090
Bst2UI	CCWGG	2 cut(s)	269, 963
Bst4CI	ACNGT	4 cut(s)	671, 853, 880, 898
Bst6I	CTCTTC	3 cut(s)	471, 827, 1110
BstACI	GRCGYC	2 cut(s)	966, 1599
BstAPI	GCANNNNNTGC	1 cut(s)	633
BstC8I	GCNNGC	5 cut(s)	602, 729, 733, 956, 1805
BstDEI	CTNAG	5 cut(s)	69, 1403, 1560, 1871, 1888
BstENI	CCTNNNNNAGG	1 cut(s)	404
BstF5I	GGATG	4 cut(s)	224, 280, 688, 1946
BstFNI	CGCG	2 cut(s)	50, 1320
BstH2I	RGCGCY	1 cut(s)	969
BstHHI	GCGC	3 cut(s)	595, 968, 1320
BstKTI	GATC	8 cut(s)	389, 949, 1309, 1423, 1623, 1684, 1741, 1925
BstMAI	GTCTC	4 cut(s)	175, 888, 1880, 1990
BstMBI	GATC	8 cut(s)	386, 946, 1306, 1420, 1620, 1681, 1738, 1922
BstMWI	GCNNNNNNNGC	7 cut(s)	319, 372, 487, 601, 633, 755, 974
BstNI	CCWGG	2 cut(s)	269, 963
BstNSI	RCATGY	1 cut(s)	370
BstSCI	CCNGG	2 cut(s)	267, 961
BstSFI	CTRYAG	2 cut(s)	516, 1603
BstSLI	GKGCMC	1 cut(s)	602
BstUI	CGCG	2 cut(s)	50, 1320
BstV1I	GCAGC	5 cut(s)	275, 502, 530, 1640, 1999
BstV2I	GAAGAC	2 cut(s)	660, 935
BstX2I	RGATCY	2 cut(s)	1681, 1738
BstYI	RGATCY	2 cut(s)	1681, 1738
BstZ17I	GTATAC	1 cut(s)	1090
Bsu36I	CCTNAGG	1 cut(s)	1403
BsuRI	GGCC	2 cut(s)	399, 689
BtgZI	GCGATG	2 cut(s)	756, 1583
BtsCI	GGATG	4 cut(s)	224, 280, 688, 1946
BtsI	GCAGTG	3 cut(s)	514, 602, 1131
BtsIMutI	CAGTG	5 cut(s)	514, 602, 627, 876, 1131
BveI	ACCTGC	1 cut(s)	512
Cac8I	GCNNGC	5 cut(s)	602, 729, 733, 956, 1805
CciI	TCATGA	1 cut(s)	1773
CfoI	GCGC	3 cut(s)	595, 968, 1320
Cfr13I	GGNCC	1 cut(s)	687
CseI	GACGC	2 cut(s)	1906, 1956
Csp6I	GTAC	4 cut(s)	129, 890, 1883, 1997
CviQI	GTAC	4 cut(s)	129, 890, 1883, 1997
DdeI	CTNAG	5 cut(s)	69, 1403, 1560, 1871, 1888
DinI	GGCGCC	1 cut(s)	967
DpnI	GATC	8 cut(s)	388, 948, 1308, 1422, 1622, 1683, 1740, 1924
DpnII	GATC	8 cut(s)	386, 946, 1306, 1420, 1620, 1681, 1738, 1922
DraI	TTTAAA	1 cut(s)	573
Eam1104I	CTCTTC	3 cut(s)	471, 827, 1110
EarI	CTCTTC	3 cut(s)	471, 827, 1110
EciI	GGCGGA	1 cut(s)	777
Eco130I	CCWWGG	1 cut(s)	1935
Eco57I	CTGAAG	3 cut(s)	549, 1071, 1824
Eco81I	CCTNAGG	1 cut(s)	1403
Eco88I	CYCGRG	2 cut(s)	301, 1368
EcoNI	CCTNNNNNAGG	1 cut(s)	404
EcoRI	GAATTC	2 cut(s)	693, 1166
EcoRII	CCWGG	2 cut(s)	267, 961
EcoT14I	CCWWGG	1 cut(s)	1935
EcoT22I	ATGCAT	5 cut(s)	905, 1575, 1699, 1784, 1911
EgeI	GGCGCC	1 cut(s)	967
EheI	GGCGCC	1 cut(s)	967
ErhI	CCWWGG	1 cut(s)	1935
FalI	AAGNNNNNCTT	2 cut(s)	1964, 1996
FbaI	TGATCA	1 cut(s)	946
FblI	GTMKAC	1 cut(s)	1089
Fnu4HI	GCNGC	5 cut(s)	289, 516, 519, 1654, 2013
FokI	GGATG	4 cut(s)	211, 287, 695, 1953
Fsp4HI	GCNGC	5 cut(s)	289, 516, 519, 1654, 2013
FspBI	CTAG	6 cut(s)	167, 732, 1187, 1194, 1431, 2041
GlaI	GCGC	3 cut(s)	594, 967, 1319
GluI	GCNGC	5 cut(s)	289, 516, 519, 1654, 2013
GsuI	CTGGAG	2 cut(s)	290, 1729
HaeII	RGCGCY	1 cut(s)	969
HaeIII	GGCC	2 cut(s)	399, 689
HapII	CCGG	1 cut(s)	246
HgaI	GACGC	2 cut(s)	1906, 1956
HhaI	GCGC	3 cut(s)	595, 968, 1320
Hin1I	GRCGYC	2 cut(s)	966, 1599
Hin6I	GCGC	3 cut(s)	593, 966, 1318
HinP1I	GCGC	3 cut(s)	593, 966, 1318
HindIII	AAGCTT	2 cut(s)	956, 1100
HinfI	GANTC	6 cut(s)	299, 410, 433, 998, 1145, 1394
HpaII	CCGG	1 cut(s)	246
HphI	GGTGA	2 cut(s)	405, 786
Hpy166II	GTNNAC	4 cut(s)	530, 550, 600, 1090
Hpy188III	TCNNGA	8 cut(s)	430, 1149, 1289, 1418, 1559, 1761, 1774, 1956
Hpy8I	GTNNAC	4 cut(s)	530, 550, 600, 1090
Hpy99I	CGWCG	1 cut(s)	1922
HpyAV	CCTTC	9 cut(s)	74, 164, 458, 673, 801, 1235, 1352, 1394, 1709
HpyCH4III	ACNGT	4 cut(s)	671, 853, 880, 898
HpyCH4IV	ACGT	3 cut(s)	444, 1342, 1599
HpyF10VI	GCNNNNNNNGC	7 cut(s)	319, 372, 487, 601, 633, 755, 974
HpyF3I	CTNAG	5 cut(s)	69, 1403, 1560, 1871, 1888
HpySE526I	ACGT	3 cut(s)	444, 1342, 1599
Hsp92I	GRCGYC	2 cut(s)	966, 1599
HspAI	GCGC	3 cut(s)	593, 966, 1318
KasI	GGCGCC	1 cut(s)	965
Ksp22I	TGATCA	1 cut(s)	946
Kzo9I	GATC	8 cut(s)	386, 946, 1306, 1420, 1620, 1681, 1738, 1922
LguI	GCTCTTC	1 cut(s)	471
LmnI	GCTCC	1 cut(s)	1561
Lsp1109I	GCAGC	5 cut(s)	275, 502, 530, 1640, 1999
LweI	GCATC	6 cut(s)	265, 912, 964, 1438, 1560, 1769
MaeI	CTAG	6 cut(s)	167, 732, 1187, 1194, 1431, 2041
MaeII	ACGT	3 cut(s)	444, 1342, 1599
MaeIII	GTNAC	9 cut(s)	42, 52, 110, 369, 671, 710, 1033, 1433, 1960
MalI	GATC	8 cut(s)	388, 948, 1308, 1422, 1622, 1683, 1740, 1924
MboI	GATC	8 cut(s)	386, 946, 1306, 1420, 1620, 1681, 1738, 1922
MflI	RGATCY	2 cut(s)	1681, 1738
MhlI	GDGCHC	1 cut(s)	602
MluCI	AATT	9 cut(s)	142, 202, 693, 814, 841, 1007, 1166, 1210, 1467
Mly113I	GGCGCC	1 cut(s)	966
MlyI	GAGTC	2 cut(s)	293, 442
MmeI	TCCRAC	3 cut(s)	252, 1766, 1900
Mph1103I	ATGCAT	5 cut(s)	905, 1575, 1699, 1784, 1911
MroXI	GAANNNNTTC	2 cut(s)	1254, 1723
MseI	TTAA	5 cut(s)	572, 699, 917, 1442, 2018
MslI	CAYNNNNRTG	1 cut(s)	365
MspI	CCGG	1 cut(s)	246
MspR9I	CCNGG	2 cut(s)	269, 963
Mva1269I	GAATGC	1 cut(s)	1782
MvaI	CCWGG	2 cut(s)	269, 963
MvnI	CGCG	2 cut(s)	50, 1320
MwoI	GCNNNNNNNGC	7 cut(s)	319, 372, 487, 601, 633, 755, 974
NarI	GGCGCC	1 cut(s)	966
NdeII	GATC	8 cut(s)	386, 946, 1306, 1420, 1620, 1681, 1738, 1922
NheI	GCTAGC	1 cut(s)	731
NlaIV	GGNNCC	6 cut(s)	688, 759, 967, 1021, 1540, 1557
NmuCI	GTSAC	1 cut(s)	52
NsiI	ATGCAT	5 cut(s)	905, 1575, 1699, 1784, 1911
NspI	RCATGY	1 cut(s)	370
PaeR7I	CTCGAG	2 cut(s)	301, 1368
PagI	TCATGA	1 cut(s)	1773
PaqCI	CACCTGC	1 cut(s)	512
PciSI	GCTCTTC	1 cut(s)	471
PctI	GAATGC	1 cut(s)	1782
PdmI	GAANNNNTTC	2 cut(s)	1254, 1723
PfeI	GAWTC	4 cut(s)	410, 998, 1145, 1394
PfoI	TCCNGGA	1 cut(s)	267
PkrI	GCNGC	5 cut(s)	290, 517, 520, 1655, 2014
PleI	GAGTC	2 cut(s)	293, 441
PluTI	GGCGCC	1 cut(s)	969
PpsI	GAGTC	2 cut(s)	293, 441
PshBI	ATTAAT	1 cut(s)	2018
PsiI	TTATAA	1 cut(s)	1347
Psp1406I	AACGTT	1 cut(s)	1342
Psp6I	CCWGG	2 cut(s)	267, 961
PspGI	CCWGG	2 cut(s)	267, 961
PspN4I	GGNNCC	6 cut(s)	688, 759, 967, 1021, 1540, 1557
PspPI	GGNCC	1 cut(s)	687
PspXI	VCTCGAGB	2 cut(s)	301, 1368
PstI	CTGCAG	1 cut(s)	520
PsuI	RGATCY	2 cut(s)	1681, 1738
RsaI	GTAC	4 cut(s)	130, 891, 1884, 1998
RsaNI	GTAC	4 cut(s)	129, 890, 1883, 1997
RseI	CAYNNNNRTG	1 cut(s)	365
SapI	GCTCTTC	1 cut(s)	471
SaqAI	TTAA	5 cut(s)	572, 699, 917, 1442, 2018
SatI	GCNGC	5 cut(s)	289, 516, 519, 1654, 2013
Sau3AI	GATC	8 cut(s)	386, 946, 1306, 1420, 1620, 1681, 1738, 1922
Sau96I	GGNCC	1 cut(s)	687
SchI	GAGTC	2 cut(s)	293, 442
ScrFI	CCNGG	2 cut(s)	269, 963
SduI	GDGCHC	1 cut(s)	602
SfaNI	GCATC	6 cut(s)	265, 912, 964, 1438, 1560, 1769
SfcI	CTRYAG	2 cut(s)	516, 1603
SfoI	GGCGCC	1 cut(s)	967
Sfr274I	CTCGAG	2 cut(s)	301, 1368
SlaI	CTCGAG	2 cut(s)	301, 1368
SmiMI	CAYNNNNRTG	1 cut(s)	365
SmlI	CTYRAG	2 cut(s)	301, 1368
SmoI	CTYRAG	2 cut(s)	301, 1368
SpeI	ACTAGT	2 cut(s)	166, 1186
Sse9I	AATT	9 cut(s)	142, 202, 693, 814, 841, 1007, 1166, 1210, 1467
SsiI	CCGC	6 cut(s)	50, 120, 788, 847, 1074, 1638
SspDI	GGCGCC	1 cut(s)	965
SspMI	CTAG	6 cut(s)	167, 732, 1187, 1194, 1431, 2041
StyD4I	CCNGG	2 cut(s)	267, 961
StyI	CCWWGG	1 cut(s)	1935
TaaI	ACNGT	4 cut(s)	671, 853, 880, 898
TaiI	ACGT	3 cut(s)	447, 1345, 1602
TaqI	TCGA	3 cut(s)	302, 741, 1369
TaqII	GACCGA	1 cut(s)	1978
TasI	AATT	9 cut(s)	142, 202, 693, 814, 841, 1007, 1166, 1210, 1467
TfiI	GAWTC	4 cut(s)	410, 998, 1145, 1394
Tru1I	TTAA	5 cut(s)	572, 699, 917, 1442, 2018
Tru9I	TTAA	5 cut(s)	572, 699, 917, 1442, 2018
TscAI	CASTG	5 cut(s)	514, 602, 634, 883, 1131
TseFI	GTSAC	1 cut(s)	52
TseI	GCWGC	5 cut(s)	288, 515, 518, 1653, 2012
Tsp45I	GTSAC	1 cut(s)	52
TspDTI	ATGAA	8 cut(s)	81, 666, 996, 1263, 1376, 1403, 1472, 1521
TspGWI	ACGGA	3 cut(s)	841, 1576, 1649
TspRI	CASTG	5 cut(s)	514, 602, 634, 883, 1131
VneI	GTGCAC	1 cut(s)	598
VspI	ATTAAT	1 cut(s)	2018
XagI	CCTNNNNNAGG	1 cut(s)	404
XapI	RAATTY	6 cut(s)	142, 693, 814, 1166, 1210, 1467
XceI	RCATGY	1 cut(s)	370
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1695
XhoI	CTCGAG	2 cut(s)	301, 1368
XmiI	GTMKAC	1 cut(s)	1089
XmnI	GAANNNNTTC	2 cut(s)	1254, 1723
XspI	CTAG	6 cut(s)	167, 732, 1187, 1194, 1431, 2041
ZraI	GACGTC	1 cut(s)	1600
Zsp2I	ATGCAT	5 cut(s)	905, 1575, 1699, 1784, 1911

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.