Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0005331

Physical Location & Seq

Genomic Coordinates Forward (+)

822967 .. 831012

Gene Structure 8046 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g00800.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGGTGTCGCTCTCGTCGTCGGCGGCGGCGATCTCTAACCGGAGTCCGTCGCCCAATGCATTCGCGCCCAAGAAGATCGGCTTCTTCTCTAATCAATGCCGCGAATTACTTCTCCCTCAGCGCTCTCCTATTTTCAGGTTGGGCTTTGTTTCTGGGTTGGAAAGGAAAAAGACTTCTAAAACCCACATCTTTGCATCAATCGCAGTAGACACTCTAGTAGAAACATCTCCCGAGAAAGTTCAGCTTCCGAAAGGTGACAGTTGGTCTGTTCATAAATTTGGTGGCACTTGCGTTGGAAGTTCTGAAAGAATCAATAATGTTGCAAAGATAATTCTTAGTGATGAATCCGAGAGGAAGTTTGTAGTAGTCTCTGCAATGTCGAAGGTAACAGATATGATGTACGATCTCATCTACAGGGCTCAATCACGAGACGAGTCCTATTTGACCGCATTAGATGCTGTTTTAGTAAAGCACAGATCAACAGCTGGCGATTTACTTGATGGTGATGAACTTGGTAGCTTCCTATCAGCACTAAATCAGGACATTTGTAACCTGAAAGCTATGCTTCGTGCAATATATATCGCTGGTCATGCCACCGAATCTTTCACCGACTTTGTGGTAGGACATGGAGAGTTATGGTCTGCTCAGTTATTGGCATCTGTCATTAGAAAGAATGGAGTGGATTGCAAATGGATGGATACAAGGGAAGTCCTTATTGTTAACCCTACTGGCTCTGATCAAGTTGATCCTGATTTTGAGAAATCTGAAAAAAGACTTGAGCAATGGTACTCAAGAAATCCATCAAAAACAATCATAGCTACTGGTTTTATTGCAAGCACACCCCAAGATATTCCTACTACTTTGAAGAGAGATGGAAGTGACTTCTCTGCAGCTATCATGGGTGCTCTATTCAAGGCCAGTCAAGTTACAATTTGGACAGATGTTGACGGTGTCTATAGTGCGGACCCCAGGAAAGTTAGTGAAGCAGTGATTCTGAAGACATTGTCTTATCAAGAGGCCTGGGAAATGTCTTATTTTGGGGCAAATGTTCTGCATCCACGCACCATCATTCCAGTAATGCGATATGACATCCCAATTGTCATAAGGAACGTTTTCAACATCTCTGCACCTGGAACAAAAATTTGTCGCTCTTCTACTACTGAGGATGAAGTGGACCAGAGTTTGGAATCCTTCGTCAGAGGGTTTGCTACAATAGACAACTTAGCCCTTGTAAATGTTGAAGGAACTGGAATGGCTGGTGTTCCTGGTACAGCCAGTGCTATATTTTCTGCCGTTAAAGATGTGGGGGCAAATGTGATTATGATATCTCAGGCTAGTAGCGAGCATTCTGTATGCTTCGCTGTCCCGGAGAAGGAAGTAAAAGCTGTTTCTGAGGCTCTGCAATCTAGGTTCCGTGAAGCTTTGAATGCTGGGCGTCTTTCTCAGGTTCAAGTCATTCCGAACTGTAGTATATTGGCAGCAGTTGGCCAGAAGATGGCCAGTACGCCTGGAGTTAGTGCAACTCTTTTCAATGCACTGGCAAAGGCAAATATTAATGTCCGCGCTATAGCTCAAGGTTGTTCTGAGTACAACATTACAGTAGTATTAAAGCGGGAGGATTGTATCAGAGCCCTGAGAGCGGTTCACTCTAGATTTTATCTCTCAAGAACCACTATAGCAATGGGCATTGTTGGACCAGGACTTATTGGTGCTACATTACTTGATCAACTGAGAGATCAGGCTGCAACCCTTAAGGAAGAGTTCAACATTGACTTGCGTGTAATGGGAATCACTGGTTCAAGGAAAATGCTTTTAAGTGAGACGGGTGTTGACCTATCTAGCTGGAGAGAACTTCAAACAGAAAAAGGAGAACTGGCAGATATGGAAAAATTTGTGCAGCATGTACATGGGAATCATTTTATTCCAAATACTGTTATAGTTGACTGCACAGCTGACTCTGTCATTGCAAGCCATTACTATGACTGGTTGCGGAAAGGAATACATGTAGTCACCCCCAACAAAAAGGCGAATTCAGGGCCTCTTGATCAGTATTTGAAATTAAGGGCACTTCAACGGCAAACGTATACACATTACTTCTATGAAGCCACTGTTGGTGCTGGTCTGCCAATTATCAATACATTGCAAGGGCTCCTAGAAACAGGGGACAAAATATTGCGTATTGAAGGCATCTTCAGTGGGACTTTGAGTTATATCTTCAACAACTTTGTAGGAGGACGAACCTTTAGCGAGGTGGTGGCTGAGGCAAAGCAGGCAGGGTTTACTGAGCCAGATCCAAGGGATGATCTATCTGGAACAGATGTTTGTAGGAAGGTAATAATTCTTGCTAGGGAATCTGGTCTTAAGCTGGAACTCTCTGACATTCCTGTTGAAAGCCTTGTGCCCGAACCATTGAAGGGTAGTGCATCAGCAGAGGAATTCATGCAGAAACTTCCACAGTTCGATCATGACTTGGCTACGAAAAGACAGATAGCTGAGGATGCAGGGGAAGTAAGTATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004072 GO:0004412 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009069 GO:0009070 GO:0009090 GO:0009092 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016491 GO:0016614 GO:0016616 GO:0016740 GO:0016772 GO:0016774 GO:0019202 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0055114 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01230

Pfam Domains

Protein Families

AA_kinase ACT ACT_7 Homoserine_dh NAD_binding_3

Protein Analysis

840

Amino Acids

91.75

Weight (kDa)

6.01

Isoelectric Point (pI)

36.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	89 - 370	1e-43	Amino acid kinase family
ACT_7	PF13840	406 - 468	5.2e-06	ACT domain
ACT_9	PF22468	411 - 471	6.2e-18	ACT domain
ACT_7	PF13840	486 - 550	2.2e-09	ACT domain
ACT_9	PF22468	493 - 552	1.3e-21	ACT domain
ACT	PF01842	499 - 539	3.6e-06	ACT domain
NAD_binding_3	PF03447	565 - 701	1.7e-22	Homoserine dehydrogenase, NAD binding domain
Homoserine_dh	PF00742	709 - 821	9.2e-31	Homoserine dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31230 AT4G19710 AT4G19710
fragaria_vesca	FvH4_2g00800 FvH4_2g00800 FvH4_2g00800 FvH4_2g00800
malus_domestica	MD05G1003800.v1.1 MD10G1004700.v1.1
prunus_persica	Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.8G007000_v2.0.a1 Prupe.8G007000_v2.0.a1
pyrus_communis	pycom05g00330 pycom10g00370 pycom10g00380
rosa_chinensis	RchiOBHm_Chr6g0251231
rosa_laevigata	RLG00000015472
rosa_multiflora	Rmu_sc0001637.1_g000003 Rmu_sc0015396.1_g000003
rosa_roxburghii	Rroxscaffold_7G00216900
rosa_rugosa	Rorug05G0500900.1 Rorug05G0501000
rosa_samantha	Rh6BG001700 Rh6CG007400 Rh6DG007800
rosa_wichuraiana	Rw6G001010 Rw6G001120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1183, 1495
AccBSI	CCGCTC	1 cut(s)	1640
AccI	GTMKAC	2 cut(s)	207, 2084
AccII	CGCG	3 cut(s)	65, 102, 1563
AciI	CCGC	9 cut(s)	23, 26, 100, 447, 962, 1561, 1612, 1640, 1990
AclI	AACGTT	1 cut(s)	1110
AclWI	GGATC	2 cut(s)	740, 2285
AcoI	YGGCCR	2 cut(s)	1486, 1497
AcsI	RAATTY	5 cut(s)	275, 1140, 1889, 2029, 2435
AcuI	CTGAAG	2 cut(s)	1016, 2176
AcyI	GRCGYC	1 cut(s)	1435
AfaI	GTAC	6 cut(s)	401, 788, 1270, 1504, 1589, 1905
AfeI	AGCGCT	1 cut(s)	122
AfiI	CCNNNNNNNGG	5 cut(s)	1183, 1372, 1495, 1639, 2414
AflII	CTTAAG	2 cut(s)	1751, 2360
AflIII	ACRYGT	1 cut(s)	2002
AhdI	GACNNNNNGTC	1 cut(s)	262
AjnI	CCWGG	6 cut(s)	968, 1019, 1129, 1264, 1507, 1696
AjuI	GAANNNNNNNTTGG	2 cut(s)	2094, 2126
Alw21I	GWGCWC	1 cut(s)	907
Alw26I	GTCTC	3 cut(s)	373, 423, 1814
AlwI	GGATC	2 cut(s)	740, 2285
Ama87I	CYCGRG	1 cut(s)	230
Aor51HI	AGCGCT	1 cut(s)	122
AoxI	GGCC	5 cut(s)	915, 1017, 1486, 1497, 2036
ApeKI	GCWGC	4 cut(s)	890, 1478, 1742, 1897
ApoI	RAATTY	5 cut(s)	275, 1140, 1889, 2029, 2435
AseI	ATTAAT	1 cut(s)	1554
Asp700I	GAANNNNTTC	2 cut(s)	108, 1112
AspLEI	GCGC	3 cut(s)	67, 123, 1565
AspS9I	GGNCC	4 cut(s)	964, 1174, 1694, 2036
AsuC2I	CCSGG	1 cut(s)	1367
AsuHPI	GGTGA	4 cut(s)	266, 515, 598, 2002
AvaI	CYCGRG	1 cut(s)	230
AvaII	GGWCC	3 cut(s)	964, 1174, 1694
BaeGI	GKGCMC	2 cut(s)	2068, 2403
BalI	TGGCCA	2 cut(s)	1488, 1499
BanII	GRGCYC	3 cut(s)	421, 1633, 2151
BauI	CACGAG	1 cut(s)	426
BbsI	GAAGAC	1 cut(s)	1004
Bbv12I	GWGCWC	1 cut(s)	907
BbvCI	CCTCAGC	3 cut(s)	117, 2259, 2493
BbvI	GCAGC	4 cut(s)	902, 1490, 1729, 1909
BccI	CCATC	6 cut(s)	494, 688, 808, 866, 1073, 1489
BceAI	ACGGC	2 cut(s)	1277, 2090
BciT130I	CCWGG	6 cut(s)	970, 1021, 1131, 1266, 1509, 1698
BciVI	GTATCC	1 cut(s)	691
BclI	TGATCA	3 cut(s)	736, 1723, 2044
BcnI	CCSGG	1 cut(s)	1367
BcoDI	GTCTC	3 cut(s)	373, 423, 1814
BfaI	CTAG	7 cut(s)	215, 1335, 1407, 1650, 1839, 2153, 2346
BfmI	CTRYAG	6 cut(s)	412, 888, 955, 1465, 1566, 1674
BfoI	RGCGCY	1 cut(s)	124
BfrI	CTTAAG	2 cut(s)	1751, 2360
BfuI	GTATCC	1 cut(s)	691
BisI	GCNGC	7 cut(s)	24, 27, 100, 891, 1479, 1743, 1898
BlsI	GCNGC	7 cut(s)	25, 28, 101, 892, 1480, 1744, 1899
Bme1390I	CCNGG	7 cut(s)	970, 1021, 1131, 1266, 1367, 1509, 1698
Bme18I	GGWCC	3 cut(s)	964, 1174, 1694
BmeRI	GACNNNNNGTC	1 cut(s)	262
BmeT110I	CYCGRG	1 cut(s)	230
BmgT120I	GGNCC	4 cut(s)	964, 1174, 1694, 2036
BmiI	GGNNCC	3 cut(s)	966, 1412, 2150
BmrFI	CCNGG	7 cut(s)	970, 1021, 1131, 1266, 1367, 1509, 1698
BmsI	GCATC	7 cut(s)	203, 445, 665, 1063, 2196, 2432, 2488
BpiI	GAAGAC	1 cut(s)	1004
BpmI	CTGGAG	2 cut(s)	1530, 1864
Bpu10I	CCTNAGC	3 cut(s)	117, 2259, 2493
BpuEI	CTTGAG	4 cut(s)	775, 797, 1557, 1648
BpuMI	CCSGG	1 cut(s)	1367
BsaHI	GRCGYC	1 cut(s)	1435
BsaJI	CCNNGG	3 cut(s)	968, 1020, 2294
BsaWI	WCCGGW	1 cut(s)	39
Bsc4I	CCNNNNNNNGG	5 cut(s)	1183, 1372, 1495, 1639, 2414
Bse3DI	GCAATG	5 cut(s)	381, 788, 1686, 1962, 2138
BseBI	CCWGG	6 cut(s)	970, 1021, 1131, 1266, 1509, 1698
BseDI	CCNNGG	3 cut(s)	968, 1020, 2294
BseGI	GGATG	6 cut(s)	699, 1054, 1089, 1171, 2305, 2503
BseLI	CCNNNNNNNGG	5 cut(s)	1183, 1372, 1495, 1639, 2414
BseMI	GCAATG	5 cut(s)	381, 788, 1686, 1962, 2138
BseSI	GKGCMC	2 cut(s)	2068, 2403
BseXI	GCAGC	4 cut(s)	902, 1490, 1729, 1909
BseYI	CCCAGC	1 cut(s)	1430
BsgI	GTGCAG	3 cut(s)	1110, 1916, 1930
Bsh1236I	CGCG	3 cut(s)	65, 102, 1563
BshFI	GGCC	5 cut(s)	917, 1019, 1488, 1499, 2038
BsiHKAI	GWGCWC	1 cut(s)	907
BsiHKCI	CYCGRG	1 cut(s)	230
BsiSI	CCGG	2 cut(s)	40, 1367
BslFI	GGGAC	3 cut(s)	1349, 2177, 2212
BslI	CCNNNNNNNGG	5 cut(s)	1183, 1372, 1495, 1639, 2414
BsmAI	GTCTC	3 cut(s)	373, 423, 1814
BsmBI	CGTCTC	2 cut(s)	423, 1814
BsmFI	GGGAC	3 cut(s)	1349, 2177, 2212
BsmI	GAATGC	3 cut(s)	59, 1345, 1432
BsnI	GGCC	5 cut(s)	917, 1019, 1488, 1499, 2038
BsoBI	CYCGRG	1 cut(s)	230
Bsp1286I	GDGCHC	6 cut(s)	421, 907, 1633, 2068, 2151, 2403
Bsp1407I	TGTACA	1 cut(s)	1903
BspACI	CCGC	9 cut(s)	23, 26, 100, 447, 962, 1561, 1612, 1640, 1990
BspANI	GGCC	5 cut(s)	917, 1019, 1488, 1499, 2038
BspFNI	CGCG	3 cut(s)	65, 102, 1563
BspHI	TCATGA	1 cut(s)	2464
BspLI	GGNNCC	3 cut(s)	966, 1412, 2150
BspMAI	CTGCAG	1 cut(s)	892
BspPI	GGATC	2 cut(s)	740, 2285
BspQI	GCTCTTC	1 cut(s)	1156
BspTI	CTTAAG	2 cut(s)	1751, 2360
BsrBI	CCGCTC	1 cut(s)	1640
BsrDI	GCAATG	5 cut(s)	381, 788, 1686, 1962, 2138
BsrGI	TGTACA	1 cut(s)	1903
BssECI	CCNNGG	3 cut(s)	968, 1020, 2294
BssNAI	GTATAC	1 cut(s)	2085
BssNI	GRCGYC	1 cut(s)	1435
BssSI	CACGAG	1 cut(s)	426
BssT1I	CCWWGG	1 cut(s)	2294
Bst1107I	GTATAC	1 cut(s)	2085
Bst2BI	CACGAG	1 cut(s)	426
Bst2UI	CCWGG	6 cut(s)	970, 1021, 1131, 1266, 1509, 1698
Bst4CI	ACNGT	7 cut(s)	260, 950, 1466, 1600, 1933, 2110, 2457
Bst6I	CTCTTC	3 cut(s)	860, 1156, 1752
BstACI	GRCGYC	1 cut(s)	1435
BstAFI	CTTAAG	2 cut(s)	1751, 2360
BstAPI	GCANNNNNTGC	1 cut(s)	455
BstAUI	TGTACA	1 cut(s)	1903
BstC8I	GCNNGC	5 cut(s)	487, 835, 1343, 1969, 2271
BstF5I	GGATG	6 cut(s)	699, 1054, 1089, 1171, 2305, 2503
BstFNI	CGCG	3 cut(s)	65, 102, 1563
BstH2I	RGCGCY	1 cut(s)	124
BstHHI	GCGC	3 cut(s)	67, 123, 1565
BstMAI	GTCTC	3 cut(s)	373, 423, 1814
BstMWI	GCNNNNNNNGC	7 cut(s)	200, 455, 590, 1427, 1637, 2270, 2498
BstNI	CCWGG	6 cut(s)	970, 1021, 1131, 1266, 1509, 1698
BstNSI	RCATGY	2 cut(s)	1904, 2006
BstSCI	CCNGG	7 cut(s)	968, 1019, 1129, 1264, 1365, 1507, 1696
BstSFI	CTRYAG	6 cut(s)	412, 888, 955, 1465, 1566, 1674
BstSLI	GKGCMC	2 cut(s)	2068, 2403
BstUI	CGCG	3 cut(s)	65, 102, 1563
BstV1I	GCAGC	4 cut(s)	902, 1490, 1729, 1909
BstV2I	GAAGAC	1 cut(s)	1004
BstX2I	RGATCY	1 cut(s)	2290
BstYI	RGATCY	1 cut(s)	2290
BstZ17I	GTATAC	1 cut(s)	2085
BsuI	GTATCC	1 cut(s)	691
BsuRI	GGCC	5 cut(s)	917, 1019, 1488, 1499, 2038
BtsCI	GGATG	6 cut(s)	699, 1054, 1089, 1171, 2305, 2503
BtsI	GCAGTG	1 cut(s)	993
BtsIMutI	CAGTG	6 cut(s)	993, 1282, 1535, 1791, 2106, 2200
Cac8I	GCNNGC	5 cut(s)	487, 835, 1343, 1969, 2271
CciI	TCATGA	1 cut(s)	2464
CfoI	GCGC	3 cut(s)	67, 123, 1565
Cfr13I	GGNCC	4 cut(s)	964, 1174, 1694, 2036
CseI	GACGC	1 cut(s)	1424
Csp6I	GTAC	6 cut(s)	400, 787, 1269, 1503, 1588, 1904
CviAII	CATG	8 cut(s)	590, 626, 898, 1901, 1907, 2003, 2440, 2465
CviQI	GTAC	6 cut(s)	400, 787, 1269, 1503, 1588, 1904
DriI	GACNNNNNGTC	1 cut(s)	262
EaeI	YGGCCR	2 cut(s)	1486, 1497
Eam1104I	CTCTTC	3 cut(s)	860, 1156, 1752
Eam1105I	GACNNNNNGTC	1 cut(s)	262
EarI	CTCTTC	3 cut(s)	860, 1156, 1752
Eco130I	CCWWGG	1 cut(s)	2294
Eco147I	AGGCCT	1 cut(s)	1019
Eco24I	GRGCYC	3 cut(s)	421, 1633, 2151
Eco32I	GATATC	1 cut(s)	1326
Eco47I	GGWCC	3 cut(s)	964, 1174, 1694
Eco47III	AGCGCT	1 cut(s)	122
Eco57I	CTGAAG	2 cut(s)	1016, 2176
Eco88I	CYCGRG	1 cut(s)	230
EcoO109I	RGGNCCY	1 cut(s)	2036
EcoRI	GAATTC	2 cut(s)	2029, 2435
EcoRII	CCWGG	6 cut(s)	968, 1019, 1129, 1264, 1507, 1696
EcoRV	GATATC	1 cut(s)	1326
EcoT14I	CCWWGG	1 cut(s)	2294
EcoT22I	ATGCAT	1 cut(s)	61
EcoT38I	GRGCYC	3 cut(s)	421, 1633, 2151
ErhI	CCWWGG	1 cut(s)	2294
Esp3I	CGTCTC	2 cut(s)	423, 1814
FaeI	CATG	8 cut(s)	593, 629, 901, 1904, 1910, 2006, 2443, 2468
FalI	AAGNNNNNCTT	6 cut(s)	65, 97, 228, 260, 549, 581
FaqI	GGGAC	3 cut(s)	1349, 2177, 2212
FatI	CATG	8 cut(s)	589, 625, 897, 1900, 1906, 2002, 2439, 2464
FauI	CCCGC	1 cut(s)	1605
FbaI	TGATCA	3 cut(s)	736, 1723, 2044
FblI	GTMKAC	2 cut(s)	207, 2084
Fnu4HI	GCNGC	7 cut(s)	24, 27, 100, 891, 1479, 1743, 1898
FokI	GGATG	6 cut(s)	706, 1041, 1076, 1178, 2312, 2510
FriOI	GRGCYC	3 cut(s)	421, 1633, 2151
Fsp4HI	GCNGC	7 cut(s)	24, 27, 100, 891, 1479, 1743, 1898
FspBI	CTAG	7 cut(s)	215, 1335, 1407, 1650, 1839, 2153, 2346
GlaI	GCGC	3 cut(s)	66, 122, 1564
GluI	GCNGC	7 cut(s)	24, 27, 100, 891, 1479, 1743, 1898
GsaI	CCCAGC	1 cut(s)	1434
GsuI	CTGGAG	2 cut(s)	1530, 1864
HaeII	RGCGCY	1 cut(s)	124
HaeIII	GGCC	5 cut(s)	917, 1019, 1488, 1499, 2038
HapII	CCGG	2 cut(s)	40, 1367
HgaI	GACGC	1 cut(s)	1424
HhaI	GCGC	3 cut(s)	67, 123, 1565
Hin1I	GRCGYC	1 cut(s)	1435
Hin1II	CATG	8 cut(s)	593, 629, 901, 1904, 1910, 2006, 2443, 2468
Hin6I	GCGC	3 cut(s)	65, 121, 1563
HinP1I	GCGC	3 cut(s)	65, 121, 1563
HincII	GTYRAC	4 cut(s)	721, 946, 1831, 1942
HindII	GTYRAC	4 cut(s)	721, 946, 1831, 1942
HindIII	AAGCTT	1 cut(s)	1419
HpaI	GTTAAC	1 cut(s)	721
HpaII	CCGG	2 cut(s)	40, 1367
HphI	GGTGA	4 cut(s)	266, 515, 598, 2002
Hpy166II	GTNNAC	9 cut(s)	208, 721, 946, 1174, 1645, 1831, 1942, 2085, 2280
Hpy8I	GTNNAC	9 cut(s)	208, 721, 946, 1174, 1645, 1831, 1942, 2085, 2280
Hpy99I	CGWCG	3 cut(s)	19, 22, 52
HpyAV	CCTTC	7 cut(s)	376, 1201, 1235, 1366, 2177, 2323, 2407
HpyCH4III	ACNGT	7 cut(s)	260, 950, 1466, 1600, 1933, 2110, 2457
HpyCH4IV	ACGT	2 cut(s)	1110, 2081
HpyF10VI	GCNNNNNNNGC	7 cut(s)	200, 455, 590, 1427, 1637, 2270, 2498
HpySE526I	ACGT	2 cut(s)	1110, 2081
Hsp92I	GRCGYC	1 cut(s)	1435
Hsp92II	CATG	8 cut(s)	593, 629, 901, 1904, 1910, 2006, 2443, 2468
HspAI	GCGC	3 cut(s)	65, 121, 1563
Ksp22I	TGATCA	3 cut(s)	736, 1723, 2044
KspAI	GTTAAC	1 cut(s)	721
LguI	GCTCTTC	1 cut(s)	1156
LmnI	GCTCC	1 cut(s)	2154
Lsp1109I	GCAGC	4 cut(s)	902, 1490, 1729, 1909
LweI	GCATC	7 cut(s)	203, 445, 665, 1063, 2196, 2432, 2488
MaeI	CTAG	7 cut(s)	215, 1335, 1407, 1650, 1839, 2153, 2346
MaeII	ACGT	2 cut(s)	1110, 2081
MaeIII	GTNAC	6 cut(s)	254, 385, 548, 878, 925, 2008
MbiI	CCGCTC	1 cut(s)	1640
MboII	GAAGA	9 cut(s)	76, 85, 877, 1009, 1143, 1504, 1769, 2182, 2206
MfeI	CAATTG	1 cut(s)	1095
MflI	RGATCY	1 cut(s)	2290
MhlI	GDGCHC	6 cut(s)	421, 907, 1633, 2068, 2151, 2403
MlsI	TGGCCA	2 cut(s)	1488, 1499
MluNI	TGGCCA	2 cut(s)	1488, 1499
MlyI	GAGTC	3 cut(s)	52, 443, 1949
MmeI	TCCRAC	3 cut(s)	138, 274, 1672
Mox20I	TGGCCA	2 cut(s)	1488, 1499
Mph1103I	ATGCAT	1 cut(s)	61
MroXI	GAANNNNTTC	2 cut(s)	108, 1112
MscI	TGGCCA	2 cut(s)	1488, 1499
MseI	TTAA	8 cut(s)	720, 1296, 1554, 1607, 1752, 1814, 2060, 2361
MslI	CAYNNNNRTG	2 cut(s)	1905, 1977
Msp20I	TGGCCA	2 cut(s)	1488, 1499
MspA1I	CMGCKG	2 cut(s)	485, 1952
MspCI	CTTAAG	2 cut(s)	1751, 2360
MspI	CCGG	2 cut(s)	40, 1367
MspR9I	CCNGG	7 cut(s)	970, 1021, 1131, 1266, 1367, 1509, 1698
MunI	CAATTG	1 cut(s)	1095
Mva1269I	GAATGC	3 cut(s)	59, 1345, 1432
MvaI	CCWGG	6 cut(s)	970, 1021, 1131, 1266, 1509, 1698
MvnI	CGCG	3 cut(s)	65, 102, 1563
MwoI	GCNNNNNNNGC	7 cut(s)	200, 455, 590, 1427, 1637, 2270, 2498
NciI	CCSGG	1 cut(s)	1367
NlaIII	CATG	8 cut(s)	593, 629, 901, 1904, 1910, 2006, 2443, 2468
NlaIV	GGNNCC	3 cut(s)	966, 1412, 2150
NmuCI	GTSAC	3 cut(s)	254, 878, 2008
NsiI	ATGCAT	1 cut(s)	61
NspI	RCATGY	2 cut(s)	1904, 2006
PagI	TCATGA	1 cut(s)	2464
PceI	AGGCCT	1 cut(s)	1019
PciI	ACATGT	1 cut(s)	2002
PciSI	GCTCTTC	1 cut(s)	1156
PcsI	WCGNNNNNNNCGW	2 cut(s)	14, 26
PctI	GAATGC	3 cut(s)	59, 1345, 1432
PdmI	GAANNNNTTC	2 cut(s)	108, 1112
PfeI	GAWTC	8 cut(s)	309, 344, 599, 991, 1187, 1788, 1912, 2351
PflFI	GACNNNGTC	3 cut(s)	950, 1003, 1958
PflMI	CCANNNNNTGG	2 cut(s)	1183, 1495
PfoI	TCCNGGA	1 cut(s)	1365
PkrI	GCNGC	7 cut(s)	25, 28, 101, 892, 1480, 1744, 1899
PleI	GAGTC	3 cut(s)	51, 442, 1949
PpsI	GAGTC	3 cut(s)	51, 442, 1949
PscI	ACATGT	1 cut(s)	2002
PshBI	ATTAAT	1 cut(s)	1554
Psp1406I	AACGTT	1 cut(s)	1110
Psp6I	CCWGG	6 cut(s)	968, 1019, 1129, 1264, 1507, 1696
PspFI	CCCAGC	1 cut(s)	1430
PspGI	CCWGG	6 cut(s)	968, 1019, 1129, 1264, 1507, 1696
PspN4I	GGNNCC	3 cut(s)	966, 1412, 2150
PspPI	GGNCC	4 cut(s)	964, 1174, 1694, 2036
PstI	CTGCAG	1 cut(s)	892
PsuI	RGATCY	1 cut(s)	2290
PsyI	GACNNNGTC	3 cut(s)	950, 1003, 1958
PvuII	CAGCTG	2 cut(s)	485, 1952
RsaI	GTAC	6 cut(s)	401, 788, 1270, 1504, 1589, 1905
RsaNI	GTAC	6 cut(s)	400, 787, 1269, 1503, 1588, 1904
RseI	CAYNNNNRTG	2 cut(s)	1905, 1977
SapI	GCTCTTC	1 cut(s)	1156
SaqAI	TTAA	8 cut(s)	720, 1296, 1554, 1607, 1752, 1814, 2060, 2361
SatI	GCNGC	7 cut(s)	24, 27, 100, 891, 1479, 1743, 1898
Sau96I	GGNCC	4 cut(s)	964, 1174, 1694, 2036
SchI	GAGTC	3 cut(s)	52, 443, 1949
ScrFI	CCNGG	7 cut(s)	970, 1021, 1131, 1266, 1367, 1509, 1698
SduI	GDGCHC	6 cut(s)	421, 907, 1633, 2068, 2151, 2403
SfaNI	GCATC	7 cut(s)	203, 445, 665, 1063, 2196, 2432, 2488
SfcI	CTRYAG	6 cut(s)	412, 888, 955, 1465, 1566, 1674
SinI	GGWCC	3 cut(s)	964, 1174, 1694
SmiMI	CAYNNNNRTG	2 cut(s)	1905, 1977
SmlI	CTYRAG	6 cut(s)	776, 790, 1572, 1663, 1751, 2360
SmoI	CTYRAG	6 cut(s)	776, 790, 1572, 1663, 1751, 2360
SseBI	AGGCCT	1 cut(s)	1019
SsiI	CCGC	9 cut(s)	23, 26, 100, 447, 962, 1561, 1612, 1640, 1990
SspI	AATATT	2 cut(s)	1552, 2172
SspMI	CTAG	7 cut(s)	215, 1335, 1407, 1650, 1839, 2153, 2346
StuI	AGGCCT	1 cut(s)	1019
StyD4I	CCNGG	7 cut(s)	968, 1019, 1129, 1264, 1365, 1507, 1696
StyI	CCWWGG	1 cut(s)	2294
TaaI	ACNGT	7 cut(s)	260, 950, 1466, 1600, 1933, 2110, 2457
TaiI	ACGT	2 cut(s)	1113, 2084
TaqI	TCGA	2 cut(s)	380, 2460
TatI	WGTACW	2 cut(s)	1587, 1903
TauI	GCSGC	3 cut(s)	26, 29, 102
TfiI	GAWTC	8 cut(s)	309, 344, 599, 991, 1187, 1788, 1912, 2351
Tru1I	TTAA	8 cut(s)	720, 1296, 1554, 1607, 1752, 1814, 2060, 2361
Tru9I	TTAA	8 cut(s)	720, 1296, 1554, 1607, 1752, 1814, 2060, 2361
TscAI	CASTG	6 cut(s)	993, 1282, 1542, 1798, 2113, 2200
TseFI	GTSAC	3 cut(s)	254, 878, 2008
TseI	GCWGC	4 cut(s)	890, 1478, 1742, 1897
Tsp45I	GTSAC	3 cut(s)	254, 878, 2008
TspDTI	ATGAA	6 cut(s)	260, 357, 522, 1182, 2115, 2428
TspGWI	ACGGA	2 cut(s)	36, 1403
TspRI	CASTG	6 cut(s)	993, 1282, 1542, 1798, 2113, 2200
Tth111I	GACNNNGTC	3 cut(s)	950, 1003, 1958
Van91I	CCANNNNNTGG	2 cut(s)	1183, 1495
Vha464I	CTTAAG	2 cut(s)	1751, 2360
VpaK11BI	GGWCC	3 cut(s)	964, 1174, 1694
VspI	ATTAAT	1 cut(s)	1554
XapI	RAATTY	5 cut(s)	275, 1140, 1889, 2029, 2435
XbaI	TCTAGA	1 cut(s)	1649
XceI	RCATGY	2 cut(s)	1904, 2006
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1678
XmiI	GTMKAC	2 cut(s)	207, 2084
XmnI	GAANNNNTTC	2 cut(s)	108, 1112
XspI	CTAG	7 cut(s)	215, 1335, 1407, 1650, 1839, 2153, 2346
Zsp2I	ATGCAT	1 cut(s)	61

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.