Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005331

Physical Location & Seq

Genomic Coordinates Forward (+)

539174 .. 549056

Gene Structure 9883 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G007000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2751 bp

ATGGCGTCGCTCTATTCAGCCATCTCCAATCCAGGCCACAGTCTCTCCCCCAGCGCATTGCCTCACGACACCAAGCCCAAGAAGATCTGCTACTCTCAATGCCCTACATTCCTCCCTCCTCACCGCTCTCGTATTTGCAGGATGGGTTTTGTTTCTGGGCTAGAAAGGAAAAAGACACTAAAACCCCGGATCATTTCATCAGTCACAGTAGATACTCCCGTAAATACATCCCCTGAAAAAGTTCAGCTTCCTAAAGGTGATACTTGGTCTGTTCATAAATTTGGTGGTACCTGTATGGGAAATTCAGAAAGAATTAAGAATGTTGCAAAAATAATTCTCAGTGATGATTCGGAGAGGAAGTTTGTAGTTGTCTCTGCAATGTCCAAGGTAACGGATATGATGTATGATCTCATCAACAAGGCTCAATCACGAGATGAGTCCTATATATCTGCATTAGATGCCGTTTTAGAAAAGCACAGATCAACAGCTCTTGATCTAATTGATGGGGATGATCTCTGTAGCTTCTTAGCACAATTGCAACATGACATCAGTAACCTGAAAGCAATGCTTCGTGCAATATACATTGCTGGTCATGCAACAGAATCCTTCACTGATTTTGTTGTAGGACATGGAGAGTTATGGTCTGCTCAGATGTTGTCATGTGTTGTTAGAAAGAATGGGGTAGATTGCAATTGGATGGATACAAGGGAAGTCCTTATTGTGAACCCTACTAGTTCTAATCAAGTGGATCCTGATTTCAAGGAATCTGAAGAGAGACTTGAGAAATGGTACTCCAAAAATCCATCAAAAGCAATTGTAGCTACTGGTTTTATTGCTAGCACACCTCAAAACATTCCTACTACTTTGAAGAGAGATGGAAGTGACTTCTCCGCAGCTATCATGGGTGCTCTATTCAAGGCTGGTCAAGTCACAATTTGGACAGATGTTGATGGAGTTTATAGTGCAGACCCCAGAAAAGTTAGTGAGGCAGTGATTCTGAAGACATTGTCTTATCAAGAGGCCTGGGAAATGTCTTATTTTGGGGCAAATGTTCTGCATCCACGCACCATCATCCCAGTGATGCGATACGACATTCCCATTATAATAAGGAACGTTTTCAACCTTGCTGCACCTGGAACAAAAATTTGTCGCTCTACTGAGGATGAAGAGGGCCAGGGTTTGGAATCGTTTGTCAAGGGGTTTGCAACAATAGACAACTTGGCCCTTGTAAATGTTGAAGGAACTGGAATGGCTGGAGTTCCTGGTACAGCCAGTACTATATTTAATGCCGTAAAAGATGTTGGGGCTAATGTTATCATGATATCTCAGGCTAGTAGTGAGCATTCAGTTTGCTTTGCTGTCCCTGAGAAGGAAGTAAATGCTGTTTTTGAGTTACTACAGTCCAGATTTCATGAGGCTTTGAATGCTGGGCGTCTTTCTCAGGTTCAAGTCATTCCAAACTGTAGCATTTTGGCAACAGTTGGCCAAAAAATGGCGAGTACTCCAGGAGTTAGTGCAACTCTTTTCAATGCACTGGCAAAGGCAAACATTAATGTGCGTGCCATAGCTCAAGGTTGTTCCGAGTACAATATTACTGTAGTATTAAAGCGAGAGGATTGTATTAGGGCCCTGAGAGCTGTCCACTCTAGATTTTATCTTTCAAGAACAACAATAGCAATGGGTATCATTGGACCTGGTCTGATTGGTGCCACATTACTTGATCAGTTAAGGGATCAGGCAGCTACCCTCAAGGAAGAGTTTAATATTGATTTACGTGTTATGGGAATAACTGGATCAAGGACAATGCTTTTGAGTGAGGCGGGTATTGACTTATCTAGATGGAGAGAACTCCAAAAAGAGAAAGGAGTAGTGGCAGATATGGACAAATTTGTGCAGCATGTACATGGTAATCAGTTCATTCCGAATAAAGTTTTGGTTGACTGCACAGCTGACTCTAGTATCGCAAGCCATTACTATGACTGGTTGCGGAAAGGAATTCATGTAGTCACCCCCAACAAAAAAGCGAATTCAGGACCTCTTGATCAGTATTTGAAGATAAGAGCTCTTCAACGGCAATCATATACACACTACTTCTACGAAGCTACTGTTGGAGCTGGTCTGCCAATTATCAATACCTTACAAGGTCTCCTCGAAACCGGGGACAAAATATTGCGTATTGAAGGCGTCTTCAGTGGAACTTTGAGTTATATCTTTAACAACTTTATAGGAAGACGGACTTTTAGTGAAGTGGTGGCCGAAGCAAAGCATGCAGGTTATACTGAGCCGGATCCCAGGGATGATCTATCTGGAACAGATGTTTGTAGAAAGGTGATAATTCTTGCTAGAGAATCTGGTCTTAAGCTGGAACTCTCTGACATCCCTGTTGAAAGCCTTGTGCCAGAACCATTGAAGAATAGTGCATCAGCAGAGGATTTCATGGAAAAACTTCCACAGTTTGATCATGACTGGGCTAAGAAAAGACAGATAGCTGAGGATGCAGGAGAAGTCTTGAGATATGTTGGGGTGGTCGACATGGTCAATCAGAAAGGGACAGTGAAGCTGCAAACATACAAGAACGATCATCCTTTTGCTCAACTATCTGGGGCAGATAACATCATTGCTTTCACAACAACAAGGTACAAAGATCAGCCCTTAATAATTCGTGGACCTGGTGCCGGTGCCGAAGTCACGGCTGGTGGAGTCTTCAGTGACATATTGCGGCTTGCCTCATATCTTGGTGCCCCGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004072 GO:0004412 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009069 GO:0009070 GO:0009090 GO:0009092 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016491 GO:0016614 GO:0016616 GO:0016740 GO:0016772 GO:0016774 GO:0019202 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0055114 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01230

Pfam Domains

Protein Families

AA_kinase ACT ACT_7 Homoserine_dh NAD_binding_3

Protein Analysis

917

Amino Acids

100.53

Weight (kDa)

6.72

Isoelectric Point (pI)

33.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31230 AT4G19710 AT4G19710
fragaria_vesca	FvH4_2g00800 FvH4_2g00800 FvH4_2g00800 FvH4_2g00800
malus_domestica	MD05G1003800.v1.1 MD10G1004700.v1.1
prunus_persica	Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.8G007000_v2.0.a1 Prupe.8G007000_v2.0.a1
pyrus_communis	pycom05g00330 pycom10g00370 pycom10g00380
rosa_chinensis	RchiOBHm_Chr6g0251231
rosa_laevigata	RLG00000015472
rosa_multiflora	Rmu_sc0001637.1_g000003 Rmu_sc0015396.1_g000003
rosa_roxburghii	Rroxscaffold_7G00216900
rosa_rugosa	Rorug05G0500900.1 Rorug05G0501000
rosa_samantha	Rh6BG001700 Rh6CG007400 Rh6DG007800
rosa_wichuraiana	Rw6G001010 Rw6G001120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1103
Acc36I	ACCTGC	1 cut(s)	2261
Acc65I	GGTACC	1 cut(s)	287
AccB1I	GGYRCC	5 cut(s)	287, 1706, 2672, 2678, 2738
AccB7I	CCANNNNNTGG	2 cut(s)	1180, 1492
AccBSI	CCGCTC	1 cut(s)	126
AccI	GTMKAC	1 cut(s)	2529
AciI	CCGC	5 cut(s)	124, 891, 1820, 1987, 2719
AclI	AACGTT	1 cut(s)	1113
AclWI	GGATC	7 cut(s)	197, 743, 756, 1740, 1801, 2282, 2295
AcoI	YGGCCR	2 cut(s)	1483, 2253
AcsI	RAATTY	6 cut(s)	278, 301, 1143, 1886, 1995, 2026
AcuI	CTGAAG	4 cut(s)	789, 1019, 2173, 2689
AcyI	GRCGYC	3 cut(s)	5, 1432, 2184
AfaI	GTAC	8 cut(s)	289, 791, 1267, 1276, 1501, 1586, 1902, 2639
AfiI	CCNNNNNNNGG	4 cut(s)	1180, 1369, 1492, 2675
AflII	CTTAAG	1 cut(s)	2357
AflIII	ACRYGT	1 cut(s)	1774
AhlI	ACTAGT	1 cut(s)	731
AjnI	CCWGG	9 cut(s)	31, 1022, 1132, 1173, 1261, 1504, 1693, 2291, 2668
AjuI	GAANNNNNNNTTGG	4 cut(s)	1916, 1948, 2091, 2123
Alw21I	GWGCWC	2 cut(s)	910, 2065
Alw26I	GTCTC	4 cut(s)	47, 376, 769, 2150
AlwI	GGATC	7 cut(s)	197, 743, 756, 1740, 1801, 2282, 2295
AoxI	GGCC	7 cut(s)	34, 1020, 1171, 1221, 1483, 1626, 2253
ApaI	GGGCCC	1 cut(s)	1630
ApeKI	GCWGC	5 cut(s)	893, 1127, 1739, 1894, 2560
ApoI	RAATTY	6 cut(s)	278, 301, 1143, 1886, 1995, 2026
ArsI	GACNNNNNNTTYG	2 cut(s)	1792, 1824
AseI	ATTAAT	1 cut(s)	1551
Asp700I	GAANNNNTTC	3 cut(s)	240, 1115, 2445
Asp718I	GGTACC	1 cut(s)	287
AspLEI	GCGC	1 cut(s)	56
AspS9I	GGNCC	7 cut(s)	1171, 1222, 1626, 1627, 1691, 2033, 2666
AsuC2I	CCSGG	2 cut(s)	187, 2158
AsuHPI	GGTGA	4 cut(s)	113, 269, 1999, 2341
AsuNHI	GCTAGC	1 cut(s)	836
AvaII	GGWCC	3 cut(s)	1691, 2033, 2666
BaeGI	GKGCMC	2 cut(s)	1630, 2743
BaeI	ACNNNNGTAYC	4 cut(s)	204, 237, 1942, 1975
BalI	TGGCCA	1 cut(s)	1485
BamHI	GGATCC	2 cut(s)	748, 2287
BanI	GGYRCC	5 cut(s)	287, 1706, 2672, 2678, 2738
BanII	GRGCYC	2 cut(s)	1630, 2065
BarI	GAAGNNNNNNTAC	2 cut(s)	74, 106
BauI	CACGAG	1 cut(s)	429
BbsI	GAAGAC	4 cut(s)	1007, 2179, 2236, 2695
Bbv12I	GWGCWC	2 cut(s)	910, 2065
BbvCI	CCTCAGC	1 cut(s)	2490
BbvI	GCAGC	5 cut(s)	905, 1114, 1751, 1906, 2547
BccI	CCATC	9 cut(s)	29, 136, 497, 691, 811, 869, 944, 1076, 1833
BceAI	ACGGC	4 cut(s)	446, 1274, 2087, 2706
BciT130I	CCWGG	9 cut(s)	33, 1024, 1134, 1175, 1263, 1506, 1695, 2293, 2670
BciVI	GTATCC	1 cut(s)	694
BclI	TGATCA	3 cut(s)	1720, 2041, 2458
BcnI	CCSGG	2 cut(s)	187, 2158
BcoDI	GTCTC	4 cut(s)	47, 376, 769, 2150
BcuI	ACTAGT	1 cut(s)	731
BfaI	CTAG	8 cut(s)	161, 732, 837, 1332, 1647, 1836, 1956, 2343
BfmI	CTRYAG	4 cut(s)	517, 1397, 1462, 1596
BfrI	CTTAAG	1 cut(s)	2357
BfuAI	ACCTGC	1 cut(s)	2261
BfuI	GTATCC	1 cut(s)	694
BglII	AGATCT	1 cut(s)	84
BisI	GCNGC	6 cut(s)	894, 1128, 1740, 1895, 2561, 2720
BlsI	GCNGC	6 cut(s)	895, 1129, 1741, 1896, 2562, 2721
BmcAI	AGTACT	2 cut(s)	1276, 1501
Bme18I	GGWCC	3 cut(s)	1691, 2033, 2666
BmgT120I	GGNCC	7 cut(s)	1171, 1222, 1626, 1627, 1691, 2033, 2666
BmiI	GGNNCC	8 cut(s)	289, 750, 1628, 1708, 2289, 2674, 2680, 2740
BmrI	ACTGGG	2 cut(s)	1070, 2476
BmsI	GCATC	5 cut(s)	448, 1066, 1071, 2429, 2485
BmtI	GCTAGC	1 cut(s)	840
BmuI	ACTGGG	2 cut(s)	1070, 2476
BpiI	GAAGAC	4 cut(s)	1007, 2179, 2236, 2695
BpmI	CTGGAG	2 cut(s)	1275, 1488
Bpu10I	CCTNAGC	1 cut(s)	2490
BpuEI	CTTGAG	4 cut(s)	800, 1554, 1733, 2530
BpuMI	CCSGG	2 cut(s)	187, 2158
BsaAI	YACGTR	1 cut(s)	1775
BsaHI	GRCGYC	3 cut(s)	5, 1432, 2184
BsaI	GGTCTC	1 cut(s)	2150
BsaJI	CCNNGG	7 cut(s)	185, 384, 1023, 1174, 2157, 2291, 2292
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 59, 344, 374, 2130, 2160
Bsc4I	CCNNNNNNNGG	4 cut(s)	1180, 1369, 1492, 2675
Bse118I	RCCGGY	1 cut(s)	2675
Bse1I	ACTGG	8 cut(s)	829, 1076, 1249, 1272, 1539, 1795, 1985, 2471
Bse3DI	GCAATG	6 cut(s)	56, 384, 570, 582, 1683, 2616
BseBI	CCWGG	9 cut(s)	33, 1024, 1134, 1175, 1263, 1506, 1695, 2293, 2670
BseDI	CCNNGG	7 cut(s)	185, 384, 1023, 1174, 2157, 2291, 2292
BseLI	CCNNNNNNNGG	4 cut(s)	1180, 1369, 1492, 2675
BseMI	GCAATG	6 cut(s)	56, 384, 570, 582, 1683, 2616
BseMII	CTCAG	9 cut(s)	352, 662, 1149, 1340, 1356, 1454, 1622, 2271, 2481
BseNI	ACTGG	8 cut(s)	829, 1076, 1249, 1272, 1539, 1795, 1985, 2471
BseRI	GAGGAG	2 cut(s)	108, 2138
BseSI	GKGCMC	2 cut(s)	1630, 2743
BseXI	GCAGC	5 cut(s)	905, 1114, 1751, 1906, 2547
BseYI	CCCAGC	2 cut(s)	50, 1427
BsgI	GTGCAG	4 cut(s)	984, 1113, 1913, 1927
BshFI	GGCC	7 cut(s)	36, 1022, 1173, 1223, 1485, 1628, 2255
BshNI	GGYRCC	5 cut(s)	287, 1706, 2672, 2678, 2738
BsiHKAI	GWGCWC	2 cut(s)	910, 2065
BsiSI	CCGG	4 cut(s)	187, 2157, 2285, 2676
BslFI	GGGAC	3 cut(s)	1346, 2174, 2563
BslI	CCNNNNNNNGG	4 cut(s)	1180, 1369, 1492, 2675
BsmAI	GTCTC	4 cut(s)	47, 376, 769, 2150
BsmFI	GGGAC	3 cut(s)	1346, 2174, 2563
BsmI	GAATGC	2 cut(s)	1342, 1429
BsnI	GGCC	7 cut(s)	36, 1022, 1173, 1223, 1485, 1628, 2255
Bso31I	GGTCTC	1 cut(s)	2150
Bsp120I	GGGCCC	1 cut(s)	1626
Bsp1286I	GDGCHC	4 cut(s)	910, 1630, 2065, 2743
Bsp1407I	TGTACA	1 cut(s)	1900
BspACI	CCGC	5 cut(s)	124, 891, 1820, 1987, 2719
BspANI	GGCC	7 cut(s)	36, 1022, 1173, 1223, 1485, 1628, 2255
BspCNI	CTCAG	9 cut(s)	351, 661, 1150, 1339, 1357, 1453, 1623, 2272, 2482
BspHI	TCATGA	3 cut(s)	1317, 1411, 2461
BspLI	GGNNCC	8 cut(s)	289, 750, 1628, 1708, 2289, 2674, 2680, 2740
BspMI	ACCTGC	1 cut(s)	2261
BspOI	GCTAGC	1 cut(s)	840
BspPI	GGATC	7 cut(s)	197, 743, 756, 1740, 1801, 2282, 2295
BspQI	GCTCTTC	1 cut(s)	2070
BspT107I	GGYRCC	5 cut(s)	287, 1706, 2672, 2678, 2738
BspTI	CTTAAG	1 cut(s)	2357
BspTNI	GGTCTC	1 cut(s)	2150
BsrBI	CCGCTC	1 cut(s)	126
BsrDI	GCAATG	6 cut(s)	56, 384, 570, 582, 1683, 2616
BsrFI	RCCGGY	1 cut(s)	2675
BsrGI	TGTACA	1 cut(s)	1900
BsrI	ACTGG	8 cut(s)	829, 1076, 1249, 1272, 1539, 1795, 1985, 2471
BssAI	RCCGGY	1 cut(s)	2675
BssECI	CCNNGG	7 cut(s)	185, 384, 1023, 1174, 2157, 2291, 2292
BssNI	GRCGYC	3 cut(s)	5, 1432, 2184
BssSI	CACGAG	1 cut(s)	429
BssT1I	CCWWGG	1 cut(s)	384
Bst2BI	CACGAG	1 cut(s)	429
Bst2UI	CCWGG	9 cut(s)	33, 1024, 1134, 1175, 1263, 1506, 1695, 2293, 2670
Bst4CI	ACNGT	9 cut(s)	41, 208, 1401, 1463, 1480, 1597, 2107, 2454, 2554
Bst6I	CTCTTC	5 cut(s)	765, 863, 1161, 1749, 2070
BstACI	GRCGYC	3 cut(s)	5, 1432, 2184
BstAFI	CTTAAG	1 cut(s)	2357
BstAPI	GCANNNNNTGC	2 cut(s)	458, 2267
BstAUI	TGTACA	1 cut(s)	1900
BstBAI	YACGTR	1 cut(s)	1775
BstC8I	GCNNGC	5 cut(s)	838, 1560, 1966, 2268, 2724
BstHHI	GCGC	1 cut(s)	56
BstMAI	GTCTC	4 cut(s)	47, 376, 769, 2150
BstMWI	GCNNNNNNNGC	7 cut(s)	458, 593, 818, 1424, 1634, 2267, 2495
BstNI	CCWGG	9 cut(s)	33, 1024, 1134, 1175, 1263, 1506, 1695, 2293, 2670
BstNSI	RCATGY	2 cut(s)	1901, 2270
BstSFI	CTRYAG	4 cut(s)	517, 1397, 1462, 1596
BstSLI	GKGCMC	2 cut(s)	1630, 2743
BstV1I	GCAGC	5 cut(s)	905, 1114, 1751, 1906, 2547
BstV2I	GAAGAC	4 cut(s)	1007, 2179, 2236, 2695
BstX2I	RGATCY	3 cut(s)	84, 748, 2287
BstYI	RGATCY	3 cut(s)	84, 748, 2287
BsuI	GTATCC	1 cut(s)	694
BsuRI	GGCC	7 cut(s)	36, 1022, 1173, 1223, 1485, 1628, 2255
BtsI	GCAGTG	1 cut(s)	996
BtsIMutI	CAGTG	8 cut(s)	346, 609, 996, 1083, 1532, 2197, 2559, 2713
BveI	ACCTGC	1 cut(s)	2261
Cac8I	GCNNGC	5 cut(s)	838, 1560, 1966, 2268, 2724
CciI	TCATGA	3 cut(s)	1317, 1411, 2461
CfoI	GCGC	1 cut(s)	56
Cfr10I	RCCGGY	1 cut(s)	2675
Cfr13I	GGNCC	7 cut(s)	1171, 1222, 1626, 1627, 1691, 2033, 2666
CseI	GACGC	2 cut(s)	1421, 2173
CsiI	ACCWGGT	2 cut(s)	1693, 2668
Csp6I	GTAC	8 cut(s)	288, 790, 1266, 1275, 1500, 1585, 1901, 2638
CspCI	CAANNNNNGTGG	2 cut(s)	1699, 1734
CviQI	GTAC	8 cut(s)	288, 790, 1266, 1275, 1500, 1585, 1901, 2638
EaeI	YGGCCR	2 cut(s)	1483, 2253
Eam1104I	CTCTTC	5 cut(s)	765, 863, 1161, 1749, 2070
EarI	CTCTTC	5 cut(s)	765, 863, 1161, 1749, 2070
Ecl136II	GAGCTC	1 cut(s)	2063
Eco130I	CCWWGG	1 cut(s)	384
Eco147I	AGGCCT	1 cut(s)	1022
Eco24I	GRGCYC	2 cut(s)	1630, 2065
Eco31I	GGTCTC	1 cut(s)	2150
Eco32I	GATATC	1 cut(s)	1323
Eco47I	GGWCC	3 cut(s)	1691, 2033, 2666
Eco53kI	GAGCTC	1 cut(s)	2063
Eco57I	CTGAAG	4 cut(s)	789, 1019, 2173, 2689
EcoICRI	GAGCTC	1 cut(s)	2063
EcoO109I	RGGNCCY	3 cut(s)	1626, 1627, 2033
EcoRI	GAATTC	2 cut(s)	1995, 2026
EcoRII	CCWGG	9 cut(s)	31, 1022, 1132, 1173, 1261, 1504, 1693, 2291, 2668
EcoRV	GATATC	1 cut(s)	1323
EcoT14I	CCWWGG	1 cut(s)	384
EcoT38I	GRGCYC	2 cut(s)	1630, 2065
ErhI	CCWWGG	1 cut(s)	384
FalI	AAGNNNNNCTT	8 cut(s)	231, 263, 552, 584, 762, 794, 2221, 2253
FaqI	GGGAC	3 cut(s)	1346, 2174, 2563
FauI	CCCGC	1 cut(s)	1813
FbaI	TGATCA	3 cut(s)	1720, 2041, 2458
FblI	GTMKAC	1 cut(s)	2529
Fnu4HI	GCNGC	6 cut(s)	894, 1128, 1740, 1895, 2561, 2720
FriOI	GRGCYC	2 cut(s)	1630, 2065
Fsp4HI	GCNGC	6 cut(s)	894, 1128, 1740, 1895, 2561, 2720
FspBI	CTAG	8 cut(s)	161, 732, 837, 1332, 1647, 1836, 1956, 2343
GlaI	GCGC	1 cut(s)	55
GluI	GCNGC	6 cut(s)	894, 1128, 1740, 1895, 2561, 2720
GsaI	CCCAGC	2 cut(s)	54, 1431
GsuI	CTGGAG	2 cut(s)	1275, 1488
HaeIII	GGCC	7 cut(s)	36, 1022, 1173, 1223, 1485, 1628, 2255
HapII	CCGG	4 cut(s)	187, 2157, 2285, 2676
HgaI	GACGC	2 cut(s)	1421, 2173
HhaI	GCGC	1 cut(s)	56
Hin1I	GRCGYC	3 cut(s)	5, 1432, 2184
Hin6I	GCGC	1 cut(s)	54
HinP1I	GCGC	1 cut(s)	54
HincII	GTYRAC	2 cut(s)	1939, 2530
HindII	GTYRAC	2 cut(s)	1939, 2530
HinfI	GANTC	9 cut(s)	347, 437, 602, 764, 994, 1184, 1952, 2348, 2700
HpaII	CCGG	4 cut(s)	187, 2157, 2285, 2676
HphI	GGTGA	4 cut(s)	113, 269, 1999, 2341
Hpy166II	GTNNAC	5 cut(s)	724, 1642, 1939, 2530, 2666
Hpy8I	GTNNAC	5 cut(s)	724, 1642, 1939, 2530, 2666
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	4 cut(s)	616, 1232, 1363, 2174
HpyCH4III	ACNGT	9 cut(s)	41, 208, 1401, 1463, 1480, 1597, 2107, 2454, 2554
HpyCH4IV	ACGT	2 cut(s)	1113, 1774
HpyF10VI	GCNNNNNNNGC	7 cut(s)	458, 593, 818, 1424, 1634, 2267, 2495
HpySE526I	ACGT	2 cut(s)	1113, 1774
Hsp92I	GRCGYC	3 cut(s)	5, 1432, 2184
HspAI	GCGC	1 cut(s)	54
KpnI	GGTACC	1 cut(s)	291
Ksp22I	TGATCA	3 cut(s)	1720, 2041, 2458
LguI	GCTCTTC	1 cut(s)	2070
LmnI	GCTCC	1 cut(s)	2111
Lsp1109I	GCAGC	5 cut(s)	905, 1114, 1751, 1906, 2547
LweI	GCATC	5 cut(s)	448, 1066, 1071, 2429, 2485
MabI	ACCWGGT	2 cut(s)	1693, 2668
MaeI	CTAG	8 cut(s)	161, 732, 837, 1332, 1647, 1836, 1956, 2343
MaeII	ACGT	2 cut(s)	1113, 1774
MaeIII	GTNAC	9 cut(s)	202, 388, 551, 881, 928, 1392, 2005, 2686, 2708
MbiI	CCGCTC	1 cut(s)	126
MfeI	CAATTG	3 cut(s)	533, 691, 813
MflI	RGATCY	3 cut(s)	84, 748, 2287
MhlI	GDGCHC	4 cut(s)	910, 1630, 2065, 2743
MlsI	TGGCCA	1 cut(s)	1485
MluNI	TGGCCA	1 cut(s)	1485
MlyI	GAGTC	3 cut(s)	446, 1946, 2709
MmeI	TCCRAC	1 cut(s)	2089
Mox20I	TGGCCA	1 cut(s)	1485
MroXI	GAANNNNTTC	3 cut(s)	240, 1115, 2445
MscI	TGGCCA	1 cut(s)	1485
MseI	TTAA	9 cut(s)	315, 1284, 1551, 1604, 1727, 1761, 2214, 2358, 2654
MslI	CAYNNNNRTG	4 cut(s)	1076, 1553, 1902, 1974
Msp20I	TGGCCA	1 cut(s)	1485
MspA1I	CMGCKG	1 cut(s)	1949
MspCI	CTTAAG	1 cut(s)	2357
MspI	CCGG	4 cut(s)	187, 2157, 2285, 2676
MunI	CAATTG	3 cut(s)	533, 691, 813
Mva1269I	GAATGC	2 cut(s)	1342, 1429
MvaI	CCWGG	9 cut(s)	33, 1024, 1134, 1175, 1263, 1506, 1695, 2293, 2670
MwoI	GCNNNNNNNGC	7 cut(s)	458, 593, 818, 1424, 1634, 2267, 2495
NciI	CCSGG	2 cut(s)	187, 2158
NheI	GCTAGC	1 cut(s)	836
NlaIV	GGNNCC	8 cut(s)	289, 750, 1628, 1708, 2289, 2674, 2680, 2740
NmuCI	GTSAC	6 cut(s)	202, 881, 928, 2005, 2686, 2708
NspI	RCATGY	2 cut(s)	1901, 2270
PaeI	GCATGC	1 cut(s)	2270
PagI	TCATGA	3 cut(s)	1317, 1411, 2461
PasI	CCCWGGG	1 cut(s)	2292
PceI	AGGCCT	1 cut(s)	1022
PciSI	GCTCTTC	1 cut(s)	2070
PctI	GAATGC	2 cut(s)	1342, 1429
PdmI	GAANNNNTTC	3 cut(s)	240, 1115, 2445
PfeI	GAWTC	6 cut(s)	347, 602, 764, 994, 1184, 2348
PflFI	GACNNNGTC	3 cut(s)	1006, 1695, 2534
PflMI	CCANNNNNTGG	2 cut(s)	1180, 1492
PfoI	TCCNGGA	1 cut(s)	1504
PkrI	GCNGC	6 cut(s)	895, 1129, 1741, 1896, 2562, 2721
PleI	GAGTC	3 cut(s)	445, 1946, 2708
PpsI	GAGTC	3 cut(s)	445, 1946, 2708
Ppu21I	YACGTR	1 cut(s)	1775
PpuMI	RGGWCCY	1 cut(s)	2033
PshBI	ATTAAT	1 cut(s)	1551
PsiI	TTATAA	1 cut(s)	1103
Psp124BI	GAGCTC	1 cut(s)	2065
Psp1406I	AACGTT	1 cut(s)	1113
Psp5II	RGGWCCY	1 cut(s)	2033
Psp6I	CCWGG	9 cut(s)	31, 1022, 1132, 1173, 1261, 1504, 1693, 2291, 2668
PspFI	CCCAGC	2 cut(s)	50, 1427
PspGI	CCWGG	9 cut(s)	31, 1022, 1132, 1173, 1261, 1504, 1693, 2291, 2668
PspN4I	GGNNCC	8 cut(s)	289, 750, 1628, 1708, 2289, 2674, 2680, 2740
PspOMI	GGGCCC	1 cut(s)	1626
PspPI	GGNCC	7 cut(s)	1171, 1222, 1626, 1627, 1691, 2033, 2666
PspPPI	RGGWCCY	1 cut(s)	2033
PsuI	RGATCY	3 cut(s)	84, 748, 2287
PsyI	GACNNNGTC	3 cut(s)	1006, 1695, 2534
PvuII	CAGCTG	1 cut(s)	1949
RsaI	GTAC	8 cut(s)	289, 791, 1267, 1276, 1501, 1586, 1902, 2639
RsaNI	GTAC	8 cut(s)	288, 790, 1266, 1275, 1500, 1585, 1901, 2638
RseI	CAYNNNNRTG	4 cut(s)	1076, 1553, 1902, 1974
SacI	GAGCTC	1 cut(s)	2065
SalI	GTCGAC	1 cut(s)	2528
SapI	GCTCTTC	1 cut(s)	2070
SaqAI	TTAA	9 cut(s)	315, 1284, 1551, 1604, 1727, 1761, 2214, 2358, 2654
SatI	GCNGC	6 cut(s)	894, 1128, 1740, 1895, 2561, 2720
Sau96I	GGNCC	7 cut(s)	1171, 1222, 1626, 1627, 1691, 2033, 2666
ScaI	AGTACT	2 cut(s)	1276, 1501
SchI	GAGTC	3 cut(s)	446, 1946, 2709
SduI	GDGCHC	4 cut(s)	910, 1630, 2065, 2743
SexAI	ACCWGGT	2 cut(s)	1693, 2668
SfaNI	GCATC	5 cut(s)	448, 1066, 1071, 2429, 2485
SfcI	CTRYAG	4 cut(s)	517, 1397, 1462, 1596
SinI	GGWCC	3 cut(s)	1691, 2033, 2666
SmiMI	CAYNNNNRTG	4 cut(s)	1076, 1553, 1902, 1974
SmlI	CTYRAG	5 cut(s)	779, 1569, 1748, 2357, 2509
SmoI	CTYRAG	5 cut(s)	779, 1569, 1748, 2357, 2509
SpeI	ACTAGT	1 cut(s)	731
SphI	GCATGC	1 cut(s)	2270
SseBI	AGGCCT	1 cut(s)	1022
SsiI	CCGC	5 cut(s)	124, 891, 1820, 1987, 2719
SspI	AATATT	3 cut(s)	1591, 1765, 2169
SspMI	CTAG	8 cut(s)	161, 732, 837, 1332, 1647, 1836, 1956, 2343
SstI	GAGCTC	1 cut(s)	2065
StuI	AGGCCT	1 cut(s)	1022
StyI	CCWWGG	1 cut(s)	384
TaaI	ACNGT	9 cut(s)	41, 208, 1401, 1463, 1480, 1597, 2107, 2454, 2554
TaiI	ACGT	2 cut(s)	1116, 1777
TaqI	TCGA	2 cut(s)	2151, 2529
TatI	WGTACW	4 cut(s)	1274, 1499, 1584, 1900
TauI	GCSGC	1 cut(s)	2722
TfiI	GAWTC	6 cut(s)	347, 602, 764, 994, 1184, 2348
Tru1I	TTAA	9 cut(s)	315, 1284, 1551, 1604, 1727, 1761, 2214, 2358, 2654
Tru9I	TTAA	9 cut(s)	315, 1284, 1551, 1604, 1727, 1761, 2214, 2358, 2654
TscAI	CASTG	8 cut(s)	346, 616, 996, 1083, 1539, 2197, 2559, 2713
TseFI	GTSAC	6 cut(s)	202, 881, 928, 2005, 2686, 2708
TseI	GCWGC	5 cut(s)	893, 1127, 1739, 1894, 2560
Tsp45I	GTSAC	6 cut(s)	202, 881, 928, 2005, 2686, 2708
TspDTI	ATGAA	7 cut(s)	186, 263, 1179, 1400, 1906, 1988, 2425
TspGWI	ACGGA	2 cut(s)	407, 2248
TspRI	CASTG	8 cut(s)	346, 616, 996, 1083, 1539, 2197, 2559, 2713
Tth111I	GACNNNGTC	3 cut(s)	1006, 1695, 2534
Van91I	CCANNNNNTGG	2 cut(s)	1180, 1492
Vha464I	CTTAAG	1 cut(s)	2357
VpaK11BI	GGWCC	3 cut(s)	1691, 2033, 2666
VspI	ATTAAT	1 cut(s)	1551
XapI	RAATTY	6 cut(s)	278, 301, 1143, 1886, 1995, 2026
XbaI	TCTAGA	2 cut(s)	1646, 1835
XceI	RCATGY	2 cut(s)	1901, 2270
XmiI	GTMKAC	1 cut(s)	2529
XmnI	GAANNNNTTC	3 cut(s)	240, 1115, 2445
XspI	CTAG	8 cut(s)	161, 732, 837, 1332, 1647, 1836, 1956, 2343
ZrmI	AGTACT	2 cut(s)	1276, 1501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.