Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0005331

Physical Location & Seq

Genomic Coordinates Reverse (-)

339900 .. 349552

Gene Structure 9653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG001700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGCGTCGCTCTCGTCGTCGGCGATCTCCAATCACAGCCTCTCCCCCAATGCCTTTGTGCCTAAGAAGATCTGCTTCTTCTCTAATCAATGCCGCGCATTACTTCTCCCTCAGCGCTCTCCTATTTGCAGGATGGGCTTTGTCTCTGGGCTGGAAAGGAAAAAGACTTCTAAAACCAACATCTTTGCATCAGTCACAGACACTTCAGTAGGAACGTCCCCTGAGAAAGTCCAGCTTCCAAAAGGTGACAGTTGGTCTGTTCATAAATTTGGGGGCACTTGCGTGGGAAGTTCCGAAAGAATTAATAATGTTGCAAAGATAATTCTTAGTGATGAGTCGGAGAGGAAGTTTGTAGTGGTCTCTGCAATGTCTAAGGTAACAGATATGATGTACGATCTCATCTTAAAGGCTCAATCACGAGACAAAACCTATTTGGCTGCATTAGATGCTGTTTTAGTAAAACACAGATCAACAGCTGTCGATTTACTTGATGGGAATGAACTTGGTAACTTCTTATCAGCATTAAATCAGGACATCAGTAACCTGAAAGCTATGCTTCGTGCAATATATATAGCTGGTCATGCAACAGAATCTTTCACAGATTTTGTGGTAGGACATGGAGAGTTATGGTCTGCTCAGTTACTGGCAGCTGTTGTTAGAAAGAATGGAGTGGATTGCAAGTGGATGGATACAAGGGAAGTCCTTATTGTCAACCCTACTGGCTCTGATCAAGTCGATCCTGATTTCGAGAAATCTGAAAAGAGACTTGAGAAATGGTATTCAAGAAATCCATCAAAAACAATCATAGCTACTGGTTTTATTGCTAGTACACCCCAAGACATTCCTACTACTTTGAAGAGAGATGGAAGTGACTTCTCTGCAGCTATCATGGGTGCTCTATTCAAGGCTGGTCAAGTTACAATTTGGACAGATGTTGATGGTGTCTATAGTGCGGACCCCAGGAAAGTTAGTGAAGCAGTGATTCTGAAGACATTGTCTTATCAAGAGGCCTGGGAAATGTCTTATTTTGGGGCAAATGTTCTGCATCCACGTACCATCATTCCAGTAATGCGATATGACATCCCAATTATCATAAGGAATGTTTTCAACCTCTCTGCACCTGGAACAAAAATTTGCCGCCCTTCTACTACTGAGGATGAAGTGGACCAGAGTTTGGAATCCTTCGTCAGAGGGTTTGCGACAATAGACAACTTGGCCCTTGTAAATGTTGAAGGAACTGGAATGGCTGGTGTTCCTGGTACAGCTAGTGCTATATTTTCTGCCGTTAAAGATGTGGGGGCTAATGTTATTATGATATCTCAGGCTAGTAGCGAACATTCTGTATGCTTTGCTGTCCCGGAGAAGGAAGTAAAAGCTGTTTCTAAGGCACTGCAATCTAGGTTCCGTGAAGCTTTGAATGCTGGGCGTCTTTCTCAGGTTCAAGTCATTCCAAACTGTAGTATATTGGCAGCGGTTGGCCAGAGAATGGCAAGTACTCCTGGAGTTAGTGCAACTCTTTTCAACGCCCTGGCAAAGGCAAATATTAACGTGCGTGCTATAGCTCAAGGTTGTTCTGAGTACAACATTACAGTAGTGTTAAAGCGGGAGGATTGTATTAGGGCCCTTAGAGCGGTTCACTCTAGATTTTATCTTTCAAGAACCACTATAGCAATGGGCATTGTTGGACCAGGACTTATTGGTGCTACATTACTTGATCAACTGAGAGATCAGGCAGCAACTCTTAAGGAAGAGTTTAACATTGACTTGCGTGTAATGGGAATTACTGGCTCAAGGACAATGCTTTTGAGTGAGACGGGTGTTGACTTATCTAGATGGAGAGAACTTCAACAAGAAAAGGGAGAACGGGCAGATATGGAAAAATTTGTGCAGCATGTACATGGGAATCATTTTATTCCAAATACTGTTCTAGTTGACTGCACAGCTGACTCTGTCATTGCAAGCCATTACTATGGCTGGTTGCGGAAAGGAATACATGTAGTCACCCCCAACAAAAAGGCGAATTCAGGGCCTCTTGATCAGTATTTGAAATTAAGAGCTCTTCAACGGCAATCATATACACATTACTTCTACGAAGCCACTGTTGGAGCTGGTCTCCCAATTATCAATACATTACAAGGGCTCCTAGAAACAGGGGACAAAATATTGCGTATTGAGGGCATCTTCAGTGGGACTTTGAGTTATATCTTCAACAACTTAGTAGGAAGGCGAACCTTTAGTGAGGTGGTGGCTGAGGCAAAGCAGGCAGGGTTTACTGAGCCAGACCCAAGGGATGATCTATCTGGAACAGATGTTTGTAGGAAGGTAATATGTGCTAGGTTTTTGTCCACTGACTGTCTAGGCCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004072 GO:0004412 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009069 GO:0009070 GO:0009090 GO:0009092 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016491 GO:0016614 GO:0016616 GO:0016740 GO:0016772 GO:0016774 GO:0019202 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0055114 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01230

Pfam Domains

Protein Families

AA_kinase ACT ACT_7 Homoserine_dh NAD_binding_3

Protein Analysis

788

Amino Acids

86.16

Weight (kDa)

8.58

Isoelectric Point (pI)

33.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	86 - 367	1.3e-43	Amino acid kinase family
ACT_7	PF13840	403 - 465	4.6e-06	ACT domain
ACT_9	PF22468	408 - 468	3.9e-18	ACT domain
ACT_7	PF13840	483 - 547	1.7e-09	ACT domain
ACT_9	PF22468	490 - 549	1.5e-21	ACT domain
ACT	PF01842	495 - 536	2.7e-06	ACT domain
NAD_binding_3	PF03447	562 - 698	1.8e-21	Homoserine dehydrogenase, NAD binding domain
Homoserine_dh	PF00742	706 - 777	5.5e-23	Homoserine dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31230 AT4G19710 AT4G19710
fragaria_vesca	FvH4_2g00800 FvH4_2g00800 FvH4_2g00800 FvH4_2g00800
malus_domestica	MD05G1003800.v1.1 MD10G1004700.v1.1
prunus_persica	Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.8G007000_v2.0.a1 Prupe.8G007000_v2.0.a1
pyrus_communis	pycom05g00330 pycom10g00370 pycom10g00380
rosa_chinensis	RchiOBHm_Chr6g0251231
rosa_laevigata	RLG00000015472
rosa_multiflora	Rmu_sc0001637.1_g000003 Rmu_sc0015396.1_g000003
rosa_roxburghii	Rroxscaffold_7G00216900
rosa_rugosa	Rorug05G0500900.1 Rorug05G0501000
rosa_samantha	Rh6BG001700 Rh6CG007400 Rh6DG007800
rosa_wichuraiana	Rw6G001010 Rw6G001120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1174, 1486
AccBSI	CCGCTC	1 cut(s)	1631
AccII	CGCG	1 cut(s)	96
AciI	CCGC	7 cut(s)	94, 953, 1138, 1472, 1603, 1631, 1981
AclWI	GGATC	1 cut(s)	731
AcoI	YGGCCR	1 cut(s)	1477
AcsI	RAATTY	4 cut(s)	266, 1131, 1880, 2020
AcuI	CTGAAG	3 cut(s)	189, 1007, 2167
AcyI	GRCGYC	2 cut(s)	5, 1426
AfaI	GTAC	7 cut(s)	392, 829, 1054, 1261, 1495, 1580, 1896
AfeI	AGCGCT	1 cut(s)	116
AfiI	CCNNNNNNNGG	5 cut(s)	1174, 1363, 1486, 1534, 1630
AflII	CTTAAG	1 cut(s)	1742
AflIII	ACRYGT	1 cut(s)	1993
AhdI	GACNNNNNGTC	1 cut(s)	253
AjnI	CCWGG	7 cut(s)	959, 1010, 1120, 1255, 1498, 1527, 1687
AjuI	GAANNNNNNNTTGG	2 cut(s)	2085, 2117
AleI	CACNNNNGTG	1 cut(s)	281
Alw21I	GWGCWC	2 cut(s)	898, 2059
Alw26I	GTCTC	6 cut(s)	148, 364, 414, 757, 1805, 2117
AlwI	GGATC	1 cut(s)	731
AlwNI	CAGNNNCTG	1 cut(s)	643
Aor51HI	AGCGCT	1 cut(s)	116
AoxI	GGCC	6 cut(s)	1008, 1215, 1477, 1620, 2027, 2359
ApaI	GGGCCC	1 cut(s)	1624
ApeKI	GCWGC	6 cut(s)	437, 647, 881, 1469, 1733, 1888
ApoI	RAATTY	4 cut(s)	266, 1131, 1880, 2020
ArsI	GACNNNNNNTTYG	2 cut(s)	1786, 1818
AseI	ATTAAT	1 cut(s)	303
Asp700I	GAANNNNTTC	1 cut(s)	1103
AspLEI	GCGC	2 cut(s)	98, 117
AspS9I	GGNCC	7 cut(s)	955, 1165, 1216, 1620, 1621, 1685, 2027
AsuC2I	CCSGG	1 cut(s)	1358
AsuHPI	GGTGA	2 cut(s)	257, 1993
AvaII	GGWCC	3 cut(s)	955, 1165, 1685
BaeGI	GKGCMC	2 cut(s)	278, 1624
BalI	TGGCCA	1 cut(s)	1479
BanII	GRGCYC	3 cut(s)	1624, 2059, 2142
BauI	CACGAG	1 cut(s)	417
BbsI	GAAGAC	1 cut(s)	995
Bbv12I	GWGCWC	2 cut(s)	898, 2059
BbvCI	CCTCAGC	2 cut(s)	111, 2250
BbvI	GCAGC	6 cut(s)	424, 659, 893, 1481, 1745, 1900
BccI	CCATC	8 cut(s)	127, 485, 679, 799, 857, 932, 1064, 1827
BceAI	ACGGC	2 cut(s)	1268, 2081
BciT130I	CCWGG	7 cut(s)	961, 1012, 1122, 1257, 1500, 1529, 1689
BciVI	GTATCC	1 cut(s)	682
BclI	TGATCA	3 cut(s)	727, 1714, 2035
BcnI	CCSGG	1 cut(s)	1358
BcoDI	GTCTC	6 cut(s)	148, 364, 414, 757, 1805, 2117
BfmI	CTRYAG	5 cut(s)	879, 946, 1456, 1557, 1665
BfoI	RGCGCY	1 cut(s)	118
BfrI	CTTAAG	1 cut(s)	1742
BfuI	GTATCC	1 cut(s)	682
BglII	AGATCT	1 cut(s)	69
BisI	GCNGC	8 cut(s)	94, 438, 648, 882, 1138, 1470, 1734, 1889
BlsI	GCNGC	8 cut(s)	95, 439, 649, 883, 1139, 1471, 1735, 1890
BmcAI	AGTACT	1 cut(s)	1495
Bme1390I	CCNGG	8 cut(s)	961, 1012, 1122, 1257, 1358, 1500, 1529, 1689
Bme18I	GGWCC	3 cut(s)	955, 1165, 1685
BmeRI	GACNNNNNGTC	1 cut(s)	253
BmgT120I	GGNCC	7 cut(s)	955, 1165, 1216, 1620, 1621, 1685, 2027
BmiI	GGNNCC	4 cut(s)	957, 1403, 1622, 2141
BmrFI	CCNGG	8 cut(s)	961, 1012, 1122, 1257, 1358, 1500, 1529, 1689
BmsI	GCATC	4 cut(s)	197, 436, 1054, 2187
BpiI	GAAGAC	1 cut(s)	995
BplI	GAGNNNNNCTC	2 cut(s)	2097, 2129
BpmI	CTGGAG	1 cut(s)	1521
Bpu10I	CCTNAGC	2 cut(s)	111, 2250
BpuEI	CTTGAG	3 cut(s)	788, 1548, 1774
BpuMI	CCSGG	1 cut(s)	1358
BsaAI	YACGTR	1 cut(s)	1052
BsaHI	GRCGYC	2 cut(s)	5, 1426
BsaI	GGTCTC	2 cut(s)	364, 2117
BsaJI	CCNNGG	4 cut(s)	959, 1011, 1527, 2285
BsaXI	ACNNNNNCTCC	6 cut(s)	26, 56, 332, 362, 2124, 2154
Bsc4I	CCNNNNNNNGG	5 cut(s)	1174, 1363, 1486, 1534, 1630
Bse1I	ACTGG	6 cut(s)	648, 724, 817, 1064, 1243, 1789
Bse3DI	GCAATG	3 cut(s)	372, 1677, 1953
BseBI	CCWGG	7 cut(s)	961, 1012, 1122, 1257, 1500, 1529, 1689
BseDI	CCNNGG	4 cut(s)	959, 1011, 1527, 2285
BseGI	GGATG	6 cut(s)	138, 690, 1045, 1080, 1162, 2296
BseLI	CCNNNNNNNGG	5 cut(s)	1174, 1363, 1486, 1534, 1630
BseMI	GCAATG	3 cut(s)	372, 1677, 1953
BseNI	ACTGG	6 cut(s)	648, 724, 817, 1064, 1243, 1789
BseSI	GKGCMC	2 cut(s)	278, 1624
BseXI	GCAGC	6 cut(s)	424, 659, 893, 1481, 1745, 1900
BseYI	CCCAGC	1 cut(s)	1421
BsgI	GTGCAG	3 cut(s)	1101, 1907, 1921
Bsh1236I	CGCG	1 cut(s)	96
BshFI	GGCC	6 cut(s)	1010, 1217, 1479, 1622, 2029, 2361
BsiHKAI	GWGCWC	2 cut(s)	898, 2059
BsiSI	CCGG	1 cut(s)	1358
BslFI	GGGAC	4 cut(s)	202, 1340, 2168, 2203
BslI	CCNNNNNNNGG	5 cut(s)	1174, 1363, 1486, 1534, 1630
BsmAI	GTCTC	6 cut(s)	148, 364, 414, 757, 1805, 2117
BsmBI	CGTCTC	1 cut(s)	1805
BsmFI	GGGAC	4 cut(s)	202, 1340, 2168, 2203
BsmI	GAATGC	1 cut(s)	1423
BsnI	GGCC	6 cut(s)	1010, 1217, 1479, 1622, 2029, 2361
Bso31I	GGTCTC	2 cut(s)	364, 2117
Bsp120I	GGGCCC	1 cut(s)	1620
Bsp1286I	GDGCHC	5 cut(s)	278, 898, 1624, 2059, 2142
Bsp1407I	TGTACA	1 cut(s)	1894
BspACI	CCGC	7 cut(s)	94, 953, 1138, 1472, 1603, 1631, 1981
BspANI	GGCC	6 cut(s)	1010, 1217, 1479, 1622, 2029, 2361
BspFNI	CGCG	1 cut(s)	96
BspLI	GGNNCC	4 cut(s)	957, 1403, 1622, 2141
BspMAI	CTGCAG	1 cut(s)	883
BspPI	GGATC	1 cut(s)	731
BspQI	GCTCTTC	1 cut(s)	2064
BspTI	CTTAAG	1 cut(s)	1742
BspTNI	GGTCTC	2 cut(s)	364, 2117
BsrBI	CCGCTC	1 cut(s)	1631
BsrDI	GCAATG	3 cut(s)	372, 1677, 1953
BsrGI	TGTACA	1 cut(s)	1894
BsrI	ACTGG	6 cut(s)	648, 724, 817, 1064, 1243, 1789
BssECI	CCNNGG	4 cut(s)	959, 1011, 1527, 2285
BssNI	GRCGYC	2 cut(s)	5, 1426
BssSI	CACGAG	1 cut(s)	417
BssT1I	CCWWGG	1 cut(s)	2285
Bst2BI	CACGAG	1 cut(s)	417
Bst2UI	CCWGG	7 cut(s)	961, 1012, 1122, 1257, 1500, 1529, 1689
Bst4CI	ACNGT	6 cut(s)	251, 1457, 1591, 1924, 2101, 2354
Bst6I	CTCTTC	3 cut(s)	851, 1743, 2064
BstACI	GRCGYC	2 cut(s)	5, 1426
BstAFI	CTTAAG	1 cut(s)	1742
BstAPI	GCANNNNNTGC	1 cut(s)	446
BstAUI	TGTACA	1 cut(s)	1894
BstBAI	YACGTR	1 cut(s)	1052
BstC8I	GCNNGC	3 cut(s)	1554, 1960, 2262
BstENI	CCTNNNNNAGG	1 cut(s)	1532
BstF5I	GGATG	6 cut(s)	138, 690, 1045, 1080, 1162, 2296
BstFNI	CGCG	1 cut(s)	96
BstH2I	RGCGCY	1 cut(s)	118
BstHHI	GCGC	2 cut(s)	98, 117
BstMAI	GTCTC	6 cut(s)	148, 364, 414, 757, 1805, 2117
BstMWI	GCNNNNNNNGC	6 cut(s)	135, 446, 581, 1418, 1628, 2261
BstNI	CCWGG	7 cut(s)	961, 1012, 1122, 1257, 1500, 1529, 1689
BstNSI	RCATGY	2 cut(s)	1895, 1997
BstSCI	CCNGG	8 cut(s)	959, 1010, 1120, 1255, 1356, 1498, 1527, 1687
BstSFI	CTRYAG	5 cut(s)	879, 946, 1456, 1557, 1665
BstSLI	GKGCMC	2 cut(s)	278, 1624
BstUI	CGCG	1 cut(s)	96
BstV1I	GCAGC	6 cut(s)	424, 659, 893, 1481, 1745, 1900
BstV2I	GAAGAC	1 cut(s)	995
BstX2I	RGATCY	1 cut(s)	69
BstXI	CCANNNNNNTGG	1 cut(s)	1970
BstYI	RGATCY	1 cut(s)	69
BsuI	GTATCC	1 cut(s)	682
BsuRI	GGCC	6 cut(s)	1010, 1217, 1479, 1622, 2029, 2361
BtsCI	GGATG	6 cut(s)	138, 690, 1045, 1080, 1162, 2296
BtsI	GCAGTG	2 cut(s)	984, 1388
BtsIMutI	CAGTG	5 cut(s)	984, 1388, 2097, 2191, 2346
Cac8I	GCNNGC	3 cut(s)	1554, 1960, 2262
CaiI	CAGNNNCTG	1 cut(s)	643
CfoI	GCGC	2 cut(s)	98, 117
Cfr13I	GGNCC	7 cut(s)	955, 1165, 1216, 1620, 1621, 1685, 2027
CseI	GACGC	1 cut(s)	1415
Csp6I	GTAC	7 cut(s)	391, 828, 1053, 1260, 1494, 1579, 1895
CviAII	CATG	6 cut(s)	581, 617, 889, 1892, 1898, 1994
CviQI	GTAC	7 cut(s)	391, 828, 1053, 1260, 1494, 1579, 1895
DriI	GACNNNNNGTC	1 cut(s)	253
EaeI	YGGCCR	1 cut(s)	1477
Eam1104I	CTCTTC	3 cut(s)	851, 1743, 2064
Eam1105I	GACNNNNNGTC	1 cut(s)	253
EarI	CTCTTC	3 cut(s)	851, 1743, 2064
Ecl136II	GAGCTC	1 cut(s)	2057
Eco130I	CCWWGG	1 cut(s)	2285
Eco147I	AGGCCT	2 cut(s)	1010, 2361
Eco24I	GRGCYC	3 cut(s)	1624, 2059, 2142
Eco31I	GGTCTC	2 cut(s)	364, 2117
Eco32I	GATATC	1 cut(s)	1317
Eco47I	GGWCC	3 cut(s)	955, 1165, 1685
Eco47III	AGCGCT	1 cut(s)	116
Eco53kI	GAGCTC	1 cut(s)	2057
Eco57I	CTGAAG	3 cut(s)	189, 1007, 2167
EcoICRI	GAGCTC	1 cut(s)	2057
EcoNI	CCTNNNNNAGG	1 cut(s)	1532
EcoO109I	RGGNCCY	3 cut(s)	1620, 1621, 2027
EcoRI	GAATTC	1 cut(s)	2020
EcoRII	CCWGG	7 cut(s)	959, 1010, 1120, 1255, 1498, 1527, 1687
EcoRV	GATATC	1 cut(s)	1317
EcoT14I	CCWWGG	1 cut(s)	2285
EcoT38I	GRGCYC	3 cut(s)	1624, 2059, 2142
ErhI	CCWWGG	1 cut(s)	2285
Esp3I	CGTCTC	1 cut(s)	1805
FaeI	CATG	6 cut(s)	584, 620, 892, 1895, 1901, 1997
FalI	AAGNNNNNCTT	6 cut(s)	59, 91, 219, 251, 540, 572
FaqI	GGGAC	4 cut(s)	202, 1340, 2168, 2203
FatI	CATG	6 cut(s)	580, 616, 888, 1891, 1897, 1993
FauI	CCCGC	1 cut(s)	1596
FbaI	TGATCA	3 cut(s)	727, 1714, 2035
Fnu4HI	GCNGC	8 cut(s)	94, 438, 648, 882, 1138, 1470, 1734, 1889
FokI	GGATG	6 cut(s)	145, 697, 1032, 1067, 1169, 2303
FriOI	GRGCYC	3 cut(s)	1624, 2059, 2142
Fsp4HI	GCNGC	8 cut(s)	94, 438, 648, 882, 1138, 1470, 1734, 1889
GlaI	GCGC	2 cut(s)	97, 116
GluI	GCNGC	8 cut(s)	94, 438, 648, 882, 1138, 1470, 1734, 1889
GsaI	CCCAGC	1 cut(s)	1425
GsuI	CTGGAG	1 cut(s)	1521
HaeII	RGCGCY	1 cut(s)	118
HaeIII	GGCC	6 cut(s)	1010, 1217, 1479, 1622, 2029, 2361
HapII	CCGG	1 cut(s)	1358
HgaI	GACGC	1 cut(s)	1415
HhaI	GCGC	2 cut(s)	98, 117
Hin1I	GRCGYC	2 cut(s)	5, 1426
Hin1II	CATG	6 cut(s)	584, 620, 892, 1895, 1901, 1997
Hin6I	GCGC	2 cut(s)	96, 115
HinP1I	GCGC	2 cut(s)	96, 115
HincII	GTYRAC	3 cut(s)	712, 1822, 1933
HindII	GTYRAC	3 cut(s)	712, 1822, 1933
HindIII	AAGCTT	1 cut(s)	1410
HinfI	GANTC	6 cut(s)	335, 590, 982, 1178, 1903, 1946
HpaII	CCGG	1 cut(s)	1358
HphI	GGTGA	2 cut(s)	257, 1993
Hpy166II	GTNNAC	8 cut(s)	712, 830, 1165, 1636, 1822, 1933, 2271, 2346
Hpy188I	TCNGA	7 cut(s)	295, 340, 727, 757, 987, 1190, 1576
Hpy8I	GTNNAC	8 cut(s)	712, 830, 1165, 1636, 1822, 1933, 2271, 2346
Hpy99I	CGWCG	3 cut(s)	10, 19, 22
HpyAV	CCTTC	6 cut(s)	1152, 1192, 1226, 1357, 2217, 2314
HpyCH4III	ACNGT	6 cut(s)	251, 1457, 1591, 1924, 2101, 2354
HpyCH4IV	ACGT	3 cut(s)	215, 1051, 1548
HpyF10VI	GCNNNNNNNGC	6 cut(s)	135, 446, 581, 1418, 1628, 2261
HpySE526I	ACGT	3 cut(s)	215, 1051, 1548
Hsp92I	GRCGYC	2 cut(s)	5, 1426
Hsp92II	CATG	6 cut(s)	584, 620, 892, 1895, 1901, 1997
HspAI	GCGC	2 cut(s)	96, 115
Ksp22I	TGATCA	3 cut(s)	727, 1714, 2035
LguI	GCTCTTC	1 cut(s)	2064
LmnI	GCTCC	2 cut(s)	2105, 2145
Lsp1109I	GCAGC	6 cut(s)	424, 659, 893, 1481, 1745, 1900
LweI	GCATC	4 cut(s)	197, 436, 1054, 2187
MaeII	ACGT	3 cut(s)	215, 1051, 1548
MaeIII	GTNAC	9 cut(s)	193, 245, 376, 506, 539, 639, 869, 916, 1999
MbiI	CCGCTC	1 cut(s)	1631
MboII	GAAGA	8 cut(s)	70, 79, 868, 1000, 1760, 2051, 2173, 2197
MflI	RGATCY	1 cut(s)	69
MhlI	GDGCHC	5 cut(s)	278, 898, 1624, 2059, 2142
MlsI	TGGCCA	1 cut(s)	1479
MluNI	TGGCCA	1 cut(s)	1479
MlyI	GAGTC	2 cut(s)	344, 1940
MmeI	TCCRAC	3 cut(s)	318, 1663, 2083
Mox20I	TGGCCA	1 cut(s)	1479
MroXI	GAANNNNTTC	1 cut(s)	1103
MscI	TGGCCA	1 cut(s)	1479
MseI	TTAA	9 cut(s)	303, 404, 524, 1287, 1545, 1598, 1743, 1755, 2051
MslI	CAYNNNNRTG	3 cut(s)	281, 1896, 1968
Msp20I	TGGCCA	1 cut(s)	1479
MspA1I	CMGCKG	4 cut(s)	476, 650, 1472, 1943
MspCI	CTTAAG	1 cut(s)	1742
MspI	CCGG	1 cut(s)	1358
MspR9I	CCNGG	8 cut(s)	961, 1012, 1122, 1257, 1358, 1500, 1529, 1689
Mva1269I	GAATGC	1 cut(s)	1423
MvaI	CCWGG	7 cut(s)	961, 1012, 1122, 1257, 1500, 1529, 1689
MvnI	CGCG	1 cut(s)	96
MwoI	GCNNNNNNNGC	6 cut(s)	135, 446, 581, 1418, 1628, 2261
NciI	CCSGG	1 cut(s)	1358
NlaIII	CATG	6 cut(s)	584, 620, 892, 1895, 1901, 1997
NlaIV	GGNNCC	4 cut(s)	957, 1403, 1622, 2141
NmuCI	GTSAC	4 cut(s)	193, 245, 869, 1999
NspI	RCATGY	2 cut(s)	1895, 1997
OliI	CACNNNNGTG	1 cut(s)	281
PceI	AGGCCT	2 cut(s)	1010, 2361
PciI	ACATGT	1 cut(s)	1993
PciSI	GCTCTTC	1 cut(s)	2064
PcsI	WCGNNNNNNNCGW	2 cut(s)	14, 20
PctI	GAATGC	1 cut(s)	1423
PdmI	GAANNNNTTC	1 cut(s)	1103
PfeI	GAWTC	4 cut(s)	590, 982, 1178, 1903
PflFI	GACNNNGTC	2 cut(s)	994, 1949
PflMI	CCANNNNNTGG	2 cut(s)	1174, 1486
PfoI	TCCNGGA	2 cut(s)	1356, 1498
PkrI	GCNGC	8 cut(s)	95, 439, 649, 883, 1139, 1471, 1735, 1890
PleI	GAGTC	2 cut(s)	343, 1940
PpsI	GAGTC	2 cut(s)	343, 1940
Ppu21I	YACGTR	1 cut(s)	1052
PscI	ACATGT	1 cut(s)	1993
PshBI	ATTAAT	1 cut(s)	303
Psp124BI	GAGCTC	1 cut(s)	2059
Psp6I	CCWGG	7 cut(s)	959, 1010, 1120, 1255, 1498, 1527, 1687
PspFI	CCCAGC	1 cut(s)	1421
PspGI	CCWGG	7 cut(s)	959, 1010, 1120, 1255, 1498, 1527, 1687
PspN4I	GGNNCC	4 cut(s)	957, 1403, 1622, 2141
PspOMI	GGGCCC	1 cut(s)	1620
PspPI	GGNCC	7 cut(s)	955, 1165, 1216, 1620, 1621, 1685, 2027
PstI	CTGCAG	1 cut(s)	883
PstNI	CAGNNNCTG	1 cut(s)	643
PsuI	RGATCY	1 cut(s)	69
PsyI	GACNNNGTC	2 cut(s)	994, 1949
PvuII	CAGCTG	3 cut(s)	476, 650, 1943
RsaI	GTAC	7 cut(s)	392, 829, 1054, 1261, 1495, 1580, 1896
RsaNI	GTAC	7 cut(s)	391, 828, 1053, 1260, 1494, 1579, 1895
RseI	CAYNNNNRTG	3 cut(s)	281, 1896, 1968
SacI	GAGCTC	1 cut(s)	2059
SapI	GCTCTTC	1 cut(s)	2064
SaqAI	TTAA	9 cut(s)	303, 404, 524, 1287, 1545, 1598, 1743, 1755, 2051
SatI	GCNGC	8 cut(s)	94, 438, 648, 882, 1138, 1470, 1734, 1889
Sau96I	GGNCC	7 cut(s)	955, 1165, 1216, 1620, 1621, 1685, 2027
ScaI	AGTACT	1 cut(s)	1495
SchI	GAGTC	2 cut(s)	344, 1940
ScrFI	CCNGG	8 cut(s)	961, 1012, 1122, 1257, 1358, 1500, 1529, 1689
SduI	GDGCHC	5 cut(s)	278, 898, 1624, 2059, 2142
SfaNI	GCATC	4 cut(s)	197, 436, 1054, 2187
SfcI	CTRYAG	5 cut(s)	879, 946, 1456, 1557, 1665
SinI	GGWCC	3 cut(s)	955, 1165, 1685
SmiMI	CAYNNNNRTG	3 cut(s)	281, 1896, 1968
SmlI	CTYRAG	4 cut(s)	767, 1563, 1742, 1789
SmoI	CTYRAG	4 cut(s)	767, 1563, 1742, 1789
SseBI	AGGCCT	2 cut(s)	1010, 2361
SsiI	CCGC	7 cut(s)	94, 953, 1138, 1472, 1603, 1631, 1981
SspI	AATATT	2 cut(s)	1543, 2163
SstI	GAGCTC	1 cut(s)	2059
StuI	AGGCCT	2 cut(s)	1010, 2361
StyD4I	CCNGG	8 cut(s)	959, 1010, 1120, 1255, 1356, 1498, 1527, 1687
StyI	CCWWGG	1 cut(s)	2285
TaaI	ACNGT	6 cut(s)	251, 1457, 1591, 1924, 2101, 2354
TaiI	ACGT	3 cut(s)	218, 1054, 1551
TaqI	TCGA	3 cut(s)	480, 735, 747
TatI	WGTACW	4 cut(s)	827, 1493, 1578, 1894
TauI	GCSGC	2 cut(s)	96, 1140
TfiI	GAWTC	4 cut(s)	590, 982, 1178, 1903
Tru1I	TTAA	9 cut(s)	303, 404, 524, 1287, 1545, 1598, 1743, 1755, 2051
Tru9I	TTAA	9 cut(s)	303, 404, 524, 1287, 1545, 1598, 1743, 1755, 2051
TscAI	CASTG	5 cut(s)	984, 1395, 2104, 2191, 2353
TseFI	GTSAC	4 cut(s)	193, 245, 869, 1999
TseI	GCWGC	6 cut(s)	437, 647, 881, 1469, 1733, 1888
Tsp45I	GTSAC	4 cut(s)	193, 245, 869, 1999
TspDTI	ATGAA	3 cut(s)	251, 513, 1173
TspGWI	ACGGA	1 cut(s)	1394
TspRI	CASTG	5 cut(s)	984, 1395, 2104, 2191, 2353
Tth111I	GACNNNGTC	2 cut(s)	994, 1949
Van91I	CCANNNNNTGG	2 cut(s)	1174, 1486
Vha464I	CTTAAG	1 cut(s)	1742
VpaK11BI	GGWCC	3 cut(s)	955, 1165, 1685
VspI	ATTAAT	1 cut(s)	303
XagI	CCTNNNNNAGG	1 cut(s)	1532
XapI	RAATTY	4 cut(s)	266, 1131, 1880, 2020
XbaI	TCTAGA	2 cut(s)	1640, 1829
XceI	RCATGY	2 cut(s)	1895, 1997
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1669
XmnI	GAANNNNTTC	1 cut(s)	1103
ZrmI	AGTACT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.