Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0005331

Physical Location & Seq

Genomic Coordinates Forward (+)

1442139 .. 1451062

Gene Structure 8924 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G001010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGGCGTCGCTCTCGTCGTCGGCGATTTCCAATCACAGCCTCTCCCCCAATGCCTTTGTGCCTAAGAAGATCTGCTTCTTCTCTAATCAATGCCGCGCATTACTTCTCCCTCAGCGCTCTCCTATTTGCAGGATGGGCTTTGTCTCTGGGCTGGAAAGGAAAAAGACTTCTAAAACCAACATCTTTGCATCAGTCACAGGTTCATCTCTATTCTTTTTTTACAAAGTCTTCGAATTTGTCCTTGGCATCTTTTCGGAAAGAATTAATAATGTTGCAAATATAATTCTTAGTGATGAGTCGGAGAGGAAGTTTGTAGTGGTCTCTGCAATGTCTAAGGTAACAGATATGATGTACGATCTCATCTTAAAGGCTCAATCACGAGATGAAACCTATTTGGCTGCATTAGATGCTGTTTTAGTAAAACACAGATCAACAGCTGTCGATTTACTTGATGGGAATGAACTTGGTAACTTCTTATCAGCATTAAATCAGGACATCAGTAACCTGAAAGCTATGCTTCGTGCAATATATATAGCTGGTCATGCAACAGAATCTTTCACAGATTTTGTGGTAGGACATGGAGAGTTATGGTCTGCTCAGTTACTGGCATCTGTTGTTAGGAAGAATGGAGTGGATTGCAAGTGGATGGATACAAGGGAAGTCCTTATTGTCAACCCTACTGGCTCTGATCAAGTCGATCCTGATTTCGAGAAACTGAAAAGAGACTTGAGAAATGCTACTGGTTTTATTGCTAGTACACCCCAAGACATTCCTACTACTTTGAAGAGAGATGGAAGTGACTTCTCTGCAGCTATCATGGGTGCTCTATTCAAGGCTGGTCAAGTTACAATTTGGACAGATGTTGATGGTGTCTATAGTGCGGACCCCAGGAAAGTTAGTGAAGCAGTGATTCTGAAGACATTGTCTTATCAAGAGGCCTGGGAAATGTCTTATTTTGGGGCAAATGTTCTGCATCCACGTACCATCATTCCAGTAATGCGATATGACATCCCAATTATCATAAGGAATGTTTTCAACCTCTCTGCACCTGGAACAAAAATTTGCCGCTCTTCTACTACTGAGGATGAAGTGGACCAGAGTTTGGAATCCTACGTCAGAGGGTTTGCGACAATAGATAACTTGGCCCTTGTAAATGTTGAAGGAACTGGAATGGCTGGTGTTCCTGGTACAGCTAGTGCTATATTTTCTGCCGTTAAAGATGTGGGGGCTAATGTTATTATGATATCTCAGGCTAGTAGCGAACATTCTGTATGCTTTGCTGTCCCGGAGAAGGAAGTAAAAGCTGTTTCTAAGGCACTGCAATCTAGGTTCCGTGAAGCTTTGAATGCTGGGCGTCTTTCTCAGGTTCAAGTCATTCCAAACTGTAGTATATTGGCAGCGGTTGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCAACTCTTTTCAACGCCCTGGCAAAGGCAAATATTAACGTGCGTGCTATAGCTCAAGGTTGTTCTGAGTACAACATTACAGTAGTGTTAAAGCGGGAGGATTGTATTAGGGCCCTTAGAGCGGTTCACTCTAGATTTTATCTTTCAAGAACCACTATAGCAATGGGCATTGTTGGACCAGGACTTATTGGTGCTACATTACTTGATCAACTGAGAGATCAGGCAGCAACTCTTAAGGAAGAGTTTAACATTGACTTGCGTGTAATGGGAATTACTGGCTCAAGGACAATGCTTTTGAGTGAGACGGGTGTTGACTTATCTAGATGGAGAGAACTTCAACAAGAAAAGGGAGAACGGGCAGATATGGAAAAATTTGTGCAGCATGTACATGGGAATCATTTTATTCCAAATACTGTTCTAGTTGACTGCACAGCTGACTCTGTCATTGCAAGCCATTACTATGGCTGGTTGCGGAAAGGAATACATGTAGTCACCCCCAACAAAAAGGCGAATTCAGGGCCTCTTGATCAGTATTTGAAATTAAGAGCTCTTCAACGGCAATCATATACACATTACTTCTACGAAGCCACTGTTGGAGCTGGTCTCCCAATTATCAATACATTACAAGGGCTCCTAGAAACAGGGGACAAAATATTGCGTATTGAGGGCATCTTCAGTGGGACTTTGAGTTATATCTTCAACAACTTAGTAGGAAGACGAACCTTTAGTGAGGTGCAGCCAGACCCAAGGGATGATCTATCTGGAACAGATGTTTGTAGGAAGGTAATAATTCTTGCAAGGGAATCTGGTCTTAAGCTGGAACTCTCTGATATCCCTGTTGAAAGCCTCGTGCCAGAACCGTTGAAGGATAGCGCATCAGCTGAGGAATTCATGCAGAAACTTCCACAATTCGACCATGACTTGGCTAAGAAAAGACAGATCGCCGAGGATGCAGGGGAAGTCTTGAGATACGTTGGGGTGGTTGATGTAGTCAACCAGAAGGGGGTAGTGAAGCTGCAAGCATACAAAAACGATCACCCATTTGCTCAATTATCAGGGGCAGATAATATCATTGCTTTCACAACAACTAGGTACAAAGATCAGCCGCTAATAGTCCGCGGACCAGGAGCTGGTGCTGAAGTTACAGCTGGTGGAGTCTTCAGTGACATACTGAGGCTTGCTTCATATCTTGGTGCCCCATCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004072 GO:0004412 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009069 GO:0009070 GO:0009090 GO:0009092 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016491 GO:0016614 GO:0016616 GO:0016740 GO:0016772 GO:0016774 GO:0019202 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0055114 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01230

Pfam Domains

Protein Families

AA_kinase ACT ACT_7 Homoserine_dh NAD_binding_3

Protein Analysis

880

Amino Acids

96.37

Weight (kDa)

7.22

Isoelectric Point (pI)

33.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	86 - 343	1.1e-34	Amino acid kinase family
ACT_7	PF13840	379 - 441	5.4e-06	ACT domain
ACT_9	PF22468	384 - 444	4.5e-18	ACT domain
ACT_7	PF13840	459 - 523	2.3e-09	ACT domain
ACT_9	PF22468	466 - 525	1.3e-21	ACT domain
ACT	PF01842	472 - 512	3.9e-06	ACT domain
NAD_binding_3	PF03447	538 - 674	2.2e-21	Homoserine dehydrogenase, NAD binding domain
Homoserine_dh	PF00742	682 - 870	3e-40	Homoserine dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31230 AT4G19710 AT4G19710
fragaria_vesca	FvH4_2g00800 FvH4_2g00800 FvH4_2g00800 FvH4_2g00800
malus_domestica	MD05G1003800.v1.1 MD10G1004700.v1.1
prunus_persica	Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.8G007000_v2.0.a1 Prupe.8G007000_v2.0.a1
pyrus_communis	pycom05g00330 pycom10g00370 pycom10g00380
rosa_chinensis	RchiOBHm_Chr6g0251231
rosa_laevigata	RLG00000015472
rosa_multiflora	Rmu_sc0001637.1_g000003 Rmu_sc0015396.1_g000003
rosa_roxburghii	Rroxscaffold_7G00216900
rosa_rugosa	Rorug05G0500900.1 Rorug05G0501000
rosa_samantha	Rh6BG001700 Rh6CG007400 Rh6DG007800
rosa_wichuraiana	Rw6G001010 Rw6G001120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2630
AccB7I	CCANNNNNTGG	4 cut(s)	1102, 1414, 2359, 2567
AccBSI	CCGCTC	2 cut(s)	1068, 1559
AccII	CGCG	2 cut(s)	96, 2556
AclWI	GGATC	1 cut(s)	692
AcoI	YGGCCR	1 cut(s)	1405
AcsI	RAATTY	5 cut(s)	233, 1059, 1808, 1948, 2324
AcuI	CTGAAG	4 cut(s)	935, 2095, 2581, 2595
AcyI	GRCGYC	2 cut(s)	5, 1354
AfaI	GTAC	8 cut(s)	353, 757, 982, 1189, 1423, 1508, 1824, 2531
AfeI	AGCGCT	1 cut(s)	116
AfiI	CCNNNNNNNGG	8 cut(s)	1102, 1291, 1414, 1462, 1558, 2359, 2440, 2567
AflII	CTTAAG	2 cut(s)	1670, 2249
AflIII	ACRYGT	1 cut(s)	1921
AjnI	CCWGG	8 cut(s)	887, 938, 1048, 1183, 1426, 1455, 1615, 2560
AjuI	GAANNNNNNNTTGG	4 cut(s)	225, 257, 2013, 2045
Alw21I	GWGCWC	2 cut(s)	826, 1987
Alw26I	GTCTC	5 cut(s)	148, 325, 717, 1733, 2045
AlwI	GGATC	1 cut(s)	692
AlwNI	CAGNNNCTG	2 cut(s)	604, 2567
Aor51HI	AGCGCT	1 cut(s)	116
AoxI	GGCC	5 cut(s)	936, 1143, 1405, 1548, 1955
ApaI	GGGCCC	1 cut(s)	1552
ApeKI	GCWGC	7 cut(s)	398, 809, 1397, 1661, 1816, 2173, 2452
ApoI	RAATTY	5 cut(s)	233, 1059, 1808, 1948, 2324
ArsI	GACNNNNNNTTYG	2 cut(s)	1714, 1746
AseI	ATTAAT	1 cut(s)	264
Asp700I	GAANNNNTTC	1 cut(s)	1031
AspLEI	GCGC	3 cut(s)	98, 117, 2312
AspS9I	GGNCC	8 cut(s)	883, 1093, 1144, 1548, 1549, 1613, 1955, 2558
AsuC2I	CCSGG	1 cut(s)	1286
AsuHPI	GGTGA	2 cut(s)	1921, 2465
AsuII	TTCGAA	1 cut(s)	231
AvaII	GGWCC	4 cut(s)	883, 1093, 1613, 2558
BaeGI	GKGCMC	2 cut(s)	1552, 2635
BalI	TGGCCA	1 cut(s)	1407
BanI	GGYRCC	1 cut(s)	2630
BanII	GRGCYC	3 cut(s)	1552, 1987, 2070
BauI	CACGAG	2 cut(s)	378, 2285
BbsI	GAAGAC	4 cut(s)	220, 923, 2158, 2587
Bbv12I	GWGCWC	2 cut(s)	826, 1987
BbvCI	CCTCAGC	2 cut(s)	111, 2319
BbvI	GCAGC	7 cut(s)	385, 821, 1409, 1673, 1828, 2185, 2439
BccI	CCATC	7 cut(s)	127, 446, 640, 785, 860, 992, 1755
BceAI	ACGGC	2 cut(s)	1196, 2009
BciT130I	CCWGG	8 cut(s)	889, 940, 1050, 1185, 1428, 1457, 1617, 2562
BciVI	GTATCC	1 cut(s)	643
BclI	TGATCA	3 cut(s)	688, 1642, 1963
BcnI	CCSGG	1 cut(s)	1286
BcoDI	GTCTC	5 cut(s)	148, 325, 717, 1733, 2045
BfaI	CTAG	9 cut(s)	753, 1194, 1254, 1326, 1569, 1758, 1856, 2072, 2526
BfmI	CTRYAG	5 cut(s)	807, 874, 1384, 1485, 1593
BfoI	RGCGCY	1 cut(s)	118
BfrI	CTTAAG	2 cut(s)	1670, 2249
BfuI	GTATCC	1 cut(s)	643
BglII	AGATCT	1 cut(s)	69
BmcAI	AGTACT	1 cut(s)	1423
Bme1390I	CCNGG	9 cut(s)	889, 940, 1050, 1185, 1286, 1428, 1457, 1617, 2562
Bme18I	GGWCC	4 cut(s)	883, 1093, 1613, 2558
BmgT120I	GGNCC	8 cut(s)	883, 1093, 1144, 1548, 1549, 1613, 1955, 2558
BmiI	GGNNCC	5 cut(s)	885, 1331, 1550, 2069, 2632
BmrFI	CCNGG	9 cut(s)	889, 940, 1050, 1185, 1286, 1428, 1457, 1617, 2562
BmsI	GCATC	8 cut(s)	197, 255, 397, 617, 982, 2115, 2321, 2377
BpiI	GAAGAC	4 cut(s)	220, 923, 2158, 2587
BplI	GAGNNNNNCTC	2 cut(s)	2025, 2057
BpmI	CTGGAG	1 cut(s)	1449
Bpu10I	CCTNAGC	2 cut(s)	111, 2319
Bpu14I	TTCGAA	1 cut(s)	231
BpuEI	CTTGAG	4 cut(s)	748, 1476, 1702, 2422
BpuMI	CCSGG	1 cut(s)	1286
BsaAI	YACGTR	1 cut(s)	980
BsaHI	GRCGYC	2 cut(s)	5, 1354
BsaI	GGTCTC	2 cut(s)	325, 2045
BsaJI	CCNNGG	7 cut(s)	241, 887, 939, 1455, 2183, 2382, 2554
BsaXI	ACNNNNNCTCC	6 cut(s)	26, 56, 293, 323, 2052, 2082
Bsc4I	CCNNNNNNNGG	8 cut(s)	1102, 1291, 1414, 1462, 1558, 2359, 2440, 2567
Bse1I	ACTGG	6 cut(s)	609, 685, 745, 992, 1171, 1717
Bse3DI	GCAATG	4 cut(s)	333, 1605, 1881, 2508
BseBI	CCWGG	8 cut(s)	889, 940, 1050, 1185, 1428, 1457, 1617, 2562
BseDI	CCNNGG	7 cut(s)	241, 887, 939, 1455, 2183, 2382, 2554
BseGI	GGATG	7 cut(s)	138, 651, 973, 1008, 1090, 2194, 2392
BseLI	CCNNNNNNNGG	8 cut(s)	1102, 1291, 1414, 1462, 1558, 2359, 2440, 2567
BseMI	GCAATG	4 cut(s)	333, 1605, 1881, 2508
BseMII	CTCAG	9 cut(s)	125, 611, 1071, 1262, 1376, 1494, 1640, 2310, 2600
BseNI	ACTGG	6 cut(s)	609, 685, 745, 992, 1171, 1717
BseSI	GKGCMC	2 cut(s)	1552, 2635
BseXI	GCAGC	7 cut(s)	385, 821, 1409, 1673, 1828, 2185, 2439
BseYI	CCCAGC	1 cut(s)	1349
BsgI	GTGCAG	4 cut(s)	1029, 1835, 1849, 2192
Bsh1236I	CGCG	2 cut(s)	96, 2556
BshFI	GGCC	5 cut(s)	938, 1145, 1407, 1550, 1957
BshNI	GGYRCC	1 cut(s)	2630
BsiHKAI	GWGCWC	2 cut(s)	826, 1987
BsiSI	CCGG	1 cut(s)	1286
BslFI	GGGAC	3 cut(s)	1268, 2096, 2131
BslI	CCNNNNNNNGG	8 cut(s)	1102, 1291, 1414, 1462, 1558, 2359, 2440, 2567
BsmAI	GTCTC	5 cut(s)	148, 325, 717, 1733, 2045
BsmBI	CGTCTC	1 cut(s)	1733
BsmFI	GGGAC	3 cut(s)	1268, 2096, 2131
BsmI	GAATGC	1 cut(s)	1351
BsnI	GGCC	5 cut(s)	938, 1145, 1407, 1550, 1957
Bso31I	GGTCTC	2 cut(s)	325, 2045
Bsp119I	TTCGAA	1 cut(s)	231
Bsp120I	GGGCCC	1 cut(s)	1548
Bsp1286I	GDGCHC	5 cut(s)	826, 1552, 1987, 2070, 2635
Bsp1407I	TGTACA	1 cut(s)	1822
BspANI	GGCC	5 cut(s)	938, 1145, 1407, 1550, 1957
BspCNI	CTCAG	9 cut(s)	124, 610, 1072, 1261, 1375, 1495, 1641, 2311, 2601
BspFNI	CGCG	2 cut(s)	96, 2556
BspLI	GGNNCC	5 cut(s)	885, 1331, 1550, 2069, 2632
BspMAI	CTGCAG	1 cut(s)	811
BspPI	GGATC	1 cut(s)	692
BspQI	GCTCTTC	2 cut(s)	1075, 1992
BspT104I	TTCGAA	1 cut(s)	231
BspT107I	GGYRCC	1 cut(s)	2630
BspTI	CTTAAG	2 cut(s)	1670, 2249
BspTNI	GGTCTC	2 cut(s)	325, 2045
BsrBI	CCGCTC	2 cut(s)	1068, 1559
BsrDI	GCAATG	4 cut(s)	333, 1605, 1881, 2508
BsrGI	TGTACA	1 cut(s)	1822
BsrI	ACTGG	6 cut(s)	609, 685, 745, 992, 1171, 1717
BssECI	CCNNGG	7 cut(s)	241, 887, 939, 1455, 2183, 2382, 2554
BssNI	GRCGYC	2 cut(s)	5, 1354
BssSI	CACGAG	2 cut(s)	378, 2285
BssT1I	CCWWGG	2 cut(s)	241, 2183
Bst2BI	CACGAG	2 cut(s)	378, 2285
Bst2UI	CCWGG	8 cut(s)	889, 940, 1050, 1185, 1428, 1457, 1617, 2562
Bst4CI	ACNGT	5 cut(s)	1385, 1519, 1852, 2029, 2298
Bst6I	CTCTTC	4 cut(s)	779, 1075, 1671, 1992
BstACI	GRCGYC	2 cut(s)	5, 1354
BstAFI	CTTAAG	2 cut(s)	1670, 2249
BstAPI	GCANNNNNTGC	1 cut(s)	407
BstAUI	TGTACA	1 cut(s)	1822
BstBAI	YACGTR	1 cut(s)	980
BstBI	TTCGAA	1 cut(s)	231
BstC8I	GCNNGC	4 cut(s)	1482, 1888, 2457, 2616
BstDSI	CCRYGG	1 cut(s)	2554
BstENI	CCTNNNNNAGG	1 cut(s)	1460
BstF5I	GGATG	7 cut(s)	138, 651, 973, 1008, 1090, 2194, 2392
BstFNI	CGCG	2 cut(s)	96, 2556
BstH2I	RGCGCY	1 cut(s)	118
BstHHI	GCGC	3 cut(s)	98, 117, 2312
BstMAI	GTCTC	5 cut(s)	148, 325, 717, 1733, 2045
BstMWI	GCNNNNNNNGC	6 cut(s)	135, 407, 542, 1346, 1556, 2387
BstNI	CCWGG	8 cut(s)	889, 940, 1050, 1185, 1428, 1457, 1617, 2562
BstNSI	RCATGY	2 cut(s)	1823, 1925
BstSCI	CCNGG	9 cut(s)	887, 938, 1048, 1183, 1284, 1426, 1455, 1615, 2560
BstSFI	CTRYAG	5 cut(s)	807, 874, 1384, 1485, 1593
BstSLI	GKGCMC	2 cut(s)	1552, 2635
BstUI	CGCG	2 cut(s)	96, 2556
BstV1I	GCAGC	7 cut(s)	385, 821, 1409, 1673, 1828, 2185, 2439
BstV2I	GAAGAC	4 cut(s)	220, 923, 2158, 2587
BstX2I	RGATCY	1 cut(s)	69
BstXI	CCANNNNNNTGG	1 cut(s)	1898
BstYI	RGATCY	1 cut(s)	69
BsuI	GTATCC	1 cut(s)	643
BsuRI	GGCC	5 cut(s)	938, 1145, 1407, 1550, 1957
BtgI	CCRYGG	1 cut(s)	2554
BtsCI	GGATG	7 cut(s)	138, 651, 973, 1008, 1090, 2194, 2392
BtsI	GCAGTG	2 cut(s)	912, 1316
BtsIMutI	CAGTG	5 cut(s)	912, 1316, 2025, 2119, 2605
Cac8I	GCNNGC	4 cut(s)	1482, 1888, 2457, 2616
CaiI	CAGNNNCTG	2 cut(s)	604, 2567
CfoI	GCGC	3 cut(s)	98, 117, 2312
Cfr13I	GGNCC	8 cut(s)	883, 1093, 1144, 1548, 1549, 1613, 1955, 2558
Cfr42I	CCGCGG	1 cut(s)	2557
CseI	GACGC	1 cut(s)	1343
Csp6I	GTAC	8 cut(s)	352, 756, 981, 1188, 1422, 1507, 1823, 2530
CviAII	CATG	8 cut(s)	542, 578, 817, 1820, 1826, 1922, 2329, 2354
CviQI	GTAC	8 cut(s)	352, 756, 981, 1188, 1422, 1507, 1823, 2530
EaeI	YGGCCR	1 cut(s)	1405
Eam1104I	CTCTTC	4 cut(s)	779, 1075, 1671, 1992
EarI	CTCTTC	4 cut(s)	779, 1075, 1671, 1992
Ecl136II	GAGCTC	1 cut(s)	1985
Eco130I	CCWWGG	2 cut(s)	241, 2183
Eco147I	AGGCCT	1 cut(s)	938
Eco24I	GRGCYC	3 cut(s)	1552, 1987, 2070
Eco31I	GGTCTC	2 cut(s)	325, 2045
Eco32I	GATATC	2 cut(s)	1245, 2269
Eco47I	GGWCC	4 cut(s)	883, 1093, 1613, 2558
Eco47III	AGCGCT	1 cut(s)	116
Eco53kI	GAGCTC	1 cut(s)	1985
Eco57I	CTGAAG	4 cut(s)	935, 2095, 2581, 2595
EcoICRI	GAGCTC	1 cut(s)	1985
EcoNI	CCTNNNNNAGG	1 cut(s)	1460
EcoO109I	RGGNCCY	3 cut(s)	1548, 1549, 1955
EcoRI	GAATTC	2 cut(s)	1948, 2324
EcoRII	CCWGG	8 cut(s)	887, 938, 1048, 1183, 1426, 1455, 1615, 2560
EcoRV	GATATC	2 cut(s)	1245, 2269
EcoT14I	CCWWGG	2 cut(s)	241, 2183
EcoT38I	GRGCYC	3 cut(s)	1552, 1987, 2070
ErhI	CCWWGG	2 cut(s)	241, 2183
Esp3I	CGTCTC	1 cut(s)	1733
FaeI	CATG	8 cut(s)	545, 581, 820, 1823, 1829, 1925, 2332, 2357
FalI	AAGNNNNNCTT	4 cut(s)	59, 91, 501, 533
FaqI	GGGAC	3 cut(s)	1268, 2096, 2131
FatI	CATG	8 cut(s)	541, 577, 816, 1819, 1825, 1921, 2328, 2353
FauI	CCCGC	1 cut(s)	1524
FbaI	TGATCA	3 cut(s)	688, 1642, 1963
FokI	GGATG	7 cut(s)	145, 658, 960, 995, 1097, 2201, 2399
FriOI	GRGCYC	3 cut(s)	1552, 1987, 2070
FspBI	CTAG	9 cut(s)	753, 1194, 1254, 1326, 1569, 1758, 1856, 2072, 2526
GlaI	GCGC	3 cut(s)	97, 116, 2311
GsaI	CCCAGC	1 cut(s)	1353
GsuI	CTGGAG	1 cut(s)	1449
HaeII	RGCGCY	1 cut(s)	118
HaeIII	GGCC	5 cut(s)	938, 1145, 1407, 1550, 1957
HapII	CCGG	1 cut(s)	1286
HgaI	GACGC	1 cut(s)	1343
HhaI	GCGC	3 cut(s)	98, 117, 2312
Hin1I	GRCGYC	2 cut(s)	5, 1354
Hin1II	CATG	8 cut(s)	545, 581, 820, 1823, 1829, 1925, 2332, 2357
Hin6I	GCGC	3 cut(s)	96, 115, 2310
HinP1I	GCGC	3 cut(s)	96, 115, 2310
HincII	GTYRAC	4 cut(s)	673, 1750, 1861, 2431
HindII	GTYRAC	4 cut(s)	673, 1750, 1861, 2431
HindIII	AAGCTT	1 cut(s)	1338
HinfI	GANTC	8 cut(s)	296, 551, 910, 1106, 1831, 1874, 2240, 2592
HpaII	CCGG	1 cut(s)	1286
HphI	GGTGA	2 cut(s)	1921, 2465
Hpy166II	GTNNAC	7 cut(s)	673, 758, 1093, 1564, 1750, 1861, 2431
Hpy188I	TCNGA	7 cut(s)	256, 301, 688, 915, 1118, 1504, 2266
Hpy8I	GTNNAC	7 cut(s)	673, 758, 1093, 1564, 1750, 1861, 2431
Hpy99I	CGWCG	3 cut(s)	10, 19, 22
HpyAV	CCTTC	5 cut(s)	1154, 1285, 2212, 2296, 2431
HpyCH4III	ACNGT	5 cut(s)	1385, 1519, 1852, 2029, 2298
HpyCH4IV	ACGT	4 cut(s)	979, 1113, 1476, 2409
HpyF10VI	GCNNNNNNNGC	6 cut(s)	135, 407, 542, 1346, 1556, 2387
HpySE526I	ACGT	4 cut(s)	979, 1113, 1476, 2409
Hsp92I	GRCGYC	2 cut(s)	5, 1354
Hsp92II	CATG	8 cut(s)	545, 581, 820, 1823, 1829, 1925, 2332, 2357
HspAI	GCGC	3 cut(s)	96, 115, 2310
Ksp22I	TGATCA	3 cut(s)	688, 1642, 1963
KspI	CCGCGG	1 cut(s)	2557
LguI	GCTCTTC	2 cut(s)	1075, 1992
LmnI	GCTCC	3 cut(s)	2033, 2073, 2564
Lsp1109I	GCAGC	7 cut(s)	385, 821, 1409, 1673, 1828, 2185, 2439
LweI	GCATC	8 cut(s)	197, 255, 397, 617, 982, 2115, 2321, 2377
MaeI	CTAG	9 cut(s)	753, 1194, 1254, 1326, 1569, 1758, 1856, 2072, 2526
MaeII	ACGT	4 cut(s)	979, 1113, 1476, 2409
MbiI	CCGCTC	2 cut(s)	1068, 1559
MflI	RGATCY	1 cut(s)	69
MhlI	GDGCHC	5 cut(s)	826, 1552, 1987, 2070, 2635
MlsI	TGGCCA	1 cut(s)	1407
MluNI	TGGCCA	1 cut(s)	1407
MlyI	GAGTC	3 cut(s)	305, 1868, 2601
MmeI	TCCRAC	3 cut(s)	279, 1591, 2011
Mox20I	TGGCCA	1 cut(s)	1407
MroXI	GAANNNNTTC	1 cut(s)	1031
MscI	TGGCCA	1 cut(s)	1407
MslI	CAYNNNNRTG	2 cut(s)	1824, 1896
Msp20I	TGGCCA	1 cut(s)	1407
MspA1I	CMGCKG	6 cut(s)	437, 1400, 1871, 2318, 2556, 2585
MspCI	CTTAAG	2 cut(s)	1670, 2249
MspI	CCGG	1 cut(s)	1286
MspR9I	CCNGG	9 cut(s)	889, 940, 1050, 1185, 1286, 1428, 1457, 1617, 2562
Mva1269I	GAATGC	1 cut(s)	1351
MvaI	CCWGG	8 cut(s)	889, 940, 1050, 1185, 1428, 1457, 1617, 2562
MvnI	CGCG	2 cut(s)	96, 2556
MwoI	GCNNNNNNNGC	6 cut(s)	135, 407, 542, 1346, 1556, 2387
NciI	CCSGG	1 cut(s)	1286
NlaIII	CATG	8 cut(s)	545, 581, 820, 1823, 1829, 1925, 2332, 2357
NlaIV	GGNNCC	5 cut(s)	885, 1331, 1550, 2069, 2632
NmeAIII	GCCGAG	1 cut(s)	2407
NmuCI	GTSAC	4 cut(s)	193, 797, 1927, 2600
NspI	RCATGY	2 cut(s)	1823, 1925
NspV	TTCGAA	1 cut(s)	231
PceI	AGGCCT	1 cut(s)	938
PciI	ACATGT	1 cut(s)	1921
PciSI	GCTCTTC	2 cut(s)	1075, 1992
PcsI	WCGNNNNNNNCGW	2 cut(s)	14, 20
PctI	GAATGC	1 cut(s)	1351
PdmI	GAANNNNTTC	1 cut(s)	1031
PfeI	GAWTC	5 cut(s)	551, 910, 1106, 1831, 2240
PflFI	GACNNNGTC	2 cut(s)	922, 1877
PflMI	CCANNNNNTGG	4 cut(s)	1102, 1414, 2359, 2567
PfoI	TCCNGGA	2 cut(s)	1284, 1426
PleI	GAGTC	3 cut(s)	304, 1868, 2600
PpsI	GAGTC	3 cut(s)	304, 1868, 2600
Ppu21I	YACGTR	1 cut(s)	980
PscI	ACATGT	1 cut(s)	1921
PshBI	ATTAAT	1 cut(s)	264
Psp124BI	GAGCTC	1 cut(s)	1987
Psp6I	CCWGG	8 cut(s)	887, 938, 1048, 1183, 1426, 1455, 1615, 2560
PspFI	CCCAGC	1 cut(s)	1349
PspGI	CCWGG	8 cut(s)	887, 938, 1048, 1183, 1426, 1455, 1615, 2560
PspN4I	GGNNCC	5 cut(s)	885, 1331, 1550, 2069, 2632
PspOMI	GGGCCC	1 cut(s)	1548
PspPI	GGNCC	8 cut(s)	883, 1093, 1144, 1548, 1549, 1613, 1955, 2558
PstI	CTGCAG	1 cut(s)	811
PstNI	CAGNNNCTG	2 cut(s)	604, 2567
PsuI	RGATCY	1 cut(s)	69
PsyI	GACNNNGTC	2 cut(s)	922, 1877
PvuII	CAGCTG	4 cut(s)	437, 1871, 2318, 2585
RsaI	GTAC	8 cut(s)	353, 757, 982, 1189, 1423, 1508, 1824, 2531
RsaNI	GTAC	8 cut(s)	352, 756, 981, 1188, 1422, 1507, 1823, 2530
RseI	CAYNNNNRTG	2 cut(s)	1824, 1896
SacI	GAGCTC	1 cut(s)	1987
SacII	CCGCGG	1 cut(s)	2557
SapI	GCTCTTC	2 cut(s)	1075, 1992
Sau96I	GGNCC	8 cut(s)	883, 1093, 1144, 1548, 1549, 1613, 1955, 2558
ScaI	AGTACT	1 cut(s)	1423
SchI	GAGTC	3 cut(s)	305, 1868, 2601
ScrFI	CCNGG	9 cut(s)	889, 940, 1050, 1185, 1286, 1428, 1457, 1617, 2562
SduI	GDGCHC	5 cut(s)	826, 1552, 1987, 2070, 2635
SfaNI	GCATC	8 cut(s)	197, 255, 397, 617, 982, 2115, 2321, 2377
SfcI	CTRYAG	5 cut(s)	807, 874, 1384, 1485, 1593
Sfr303I	CCGCGG	1 cut(s)	2557
SfuI	TTCGAA	1 cut(s)	231
SgrBI	CCGCGG	1 cut(s)	2557
SinI	GGWCC	4 cut(s)	883, 1093, 1613, 2558
SmiMI	CAYNNNNRTG	2 cut(s)	1824, 1896
SmlI	CTYRAG	6 cut(s)	727, 1491, 1670, 1717, 2249, 2401
SmoI	CTYRAG	6 cut(s)	727, 1491, 1670, 1717, 2249, 2401
SseBI	AGGCCT	1 cut(s)	938
SspI	AATATT	2 cut(s)	1471, 2091
SspMI	CTAG	9 cut(s)	753, 1194, 1254, 1326, 1569, 1758, 1856, 2072, 2526
SstI	GAGCTC	1 cut(s)	1987
StuI	AGGCCT	1 cut(s)	938
StyD4I	CCNGG	9 cut(s)	887, 938, 1048, 1183, 1284, 1426, 1455, 1615, 2560
StyI	CCWWGG	2 cut(s)	241, 2183
TaaI	ACNGT	5 cut(s)	1385, 1519, 1852, 2029, 2298
TaiI	ACGT	4 cut(s)	982, 1116, 1479, 2412
TaqI	TCGA	5 cut(s)	231, 441, 696, 708, 2349
TatI	WGTACW	4 cut(s)	755, 1421, 1506, 1822
TauI	GCSGC	3 cut(s)	96, 1068, 2545
TfiI	GAWTC	5 cut(s)	551, 910, 1106, 1831, 2240
TscAI	CASTG	5 cut(s)	912, 1323, 2032, 2119, 2605
TseFI	GTSAC	4 cut(s)	193, 797, 1927, 2600
TseI	GCWGC	7 cut(s)	398, 809, 1397, 1661, 1816, 2173, 2452
Tsp45I	GTSAC	4 cut(s)	193, 797, 1927, 2600
TspDTI	ATGAA	6 cut(s)	192, 399, 474, 1101, 2317, 2610
TspGWI	ACGGA	1 cut(s)	1322
TspRI	CASTG	5 cut(s)	912, 1323, 2032, 2119, 2605
Tth111I	GACNNNGTC	2 cut(s)	922, 1877
Van91I	CCANNNNNTGG	4 cut(s)	1102, 1414, 2359, 2567
Vha464I	CTTAAG	2 cut(s)	1670, 2249
VpaK11BI	GGWCC	4 cut(s)	883, 1093, 1613, 2558
VspI	ATTAAT	1 cut(s)	264
XagI	CCTNNNNNAGG	1 cut(s)	1460
XapI	RAATTY	5 cut(s)	233, 1059, 1808, 1948, 2324
XbaI	TCTAGA	2 cut(s)	1568, 1757
XceI	RCATGY	2 cut(s)	1823, 1925
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1597
XmnI	GAANNNNTTC	1 cut(s)	1031
XspI	CTAG	9 cut(s)	753, 1194, 1254, 1326, 1569, 1758, 1856, 2072, 2526
ZrmI	AGTACT	1 cut(s)	1423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.