Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0005104

Physical Location & Seq

Genomic Coordinates Forward (+)

3095313 .. 3099338

Gene Structure 4026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g03900.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGGACCTCGGCTGCTTGGACTTGGGTTGCATAGAGGTCTCCGACAAGCACGGCGCCACTCAGCCCAGCCCTGAGTCGCTCACGGCGAGCTCCAAGATTGGAAAGATTAAAAAGCCTGCTCACCGTAAATCTTCTCCTCTCAATTGGTTCCCACGAAAGAAAGGAGACTCCTACTTGATGAGGAAAATCAAAATGCTACAGGAAGCAGATGGCATGAATTTAACTCTTGATGAGACTCTAGGTGATTCAAATCCACATTACTCAAAGGTGCTGAGGGAAAAAATGGCAGCAAGAGAAGCTGCACAAAAGGCAATGCAAGCACGGAAAGCTGCATTGGTGGAAGCATCATGGTGTCGAATACTTCAGGCAGCCAGGATTCAAAGAAAAGAAGCAGAAGCTGAACTGTTGAAAGTGGACAAAGCTGCAGCTGAAGCTTTTGAGGTGGCATCATCCGTGGGAGTTATCATGTATGACATACCAAACTGCACTCGCAAGCCTTCTGTAGAAACATCCACTATAAATGGAGGAAAGTCTACTACCCACACAGTCACAGCATCGTTTGAGACTGCATTTGAGGTGGACAAAGAAGTAGCTGCTGCTGTGAAGGTTGCATTAGTTACACTTGGAAATAGCCCTTCTTTTAGTAAAGATGAGTTTAAAGAACTGCTTCGAAAAATTAGTGAGAATCCTGATACAGGTGAAAAGGAATTGACTGAGTTCAGTTCAGAATGTGAATCAGAATCTGGATCGGAACTTGAAACAGTGGCCGAGAAAGATAATGCCAATTCCCAAGATTTGGATTGTAAGATGCAAGGTCTGGAGGTAAGACAAAAGAAAAGTAGAAGGCAGTCTTTTGGAAAGCTTAATATGGAAAATATAGTGGACATGATTCTTGAGAGGCTTCAATGCTTGAAAGAAGAGGAACTCTCTTCTCTTGCCACTATAGTTGCTACTTGTGGTTTAAATGCTGCCTTGGCTGAAAATAGCAAGCTGCTTGGTCCAGGATCTGCTGCTGAGACATTTCCCCGAAGGATGTCTACTTTAGGAGCAGGGAAACCTGAATACTTCTTAGATGGGCAGATAAGAAAGAAGGAAATCAAATCAGAACTTCCAAGTCTAGACAAGTTTTTGGTTAAGCACATGACTAAGCTTGAAAAAGAAGTGCAAGAAGCCAAGAATAGAAGGAATGAGTCTAAGGAAGGTACTGCGGGAAATTCTGATAGAATCATCGATGAGAAGGCCAGTTCAGATAAAAGCCAAATTATTACAGAGACTGTACCAGGACTGGGAACTATCCTTTTGAAGCATGGTTCGAAGTTTGAGAAGGAGATCAAAGAGGCCAAGGAAAATTCAAGAGGAGATTTTGGAACACTTCAGAAGAACTCAGAGAGAAATAAGACATCATATGACGCCATACCTAGCTTGGAGAGTGTGTTGGTTAAACATTCTTCGAAACTTGAAAAGGAAGTCGAAGAGGCCAAGAAAAATTTTGTGAGAACAGCTACTGTTAGCCATAAGAAAGTGGGAGGGGTTAGTCAGGGAAGAGAAAATGCCACAGAAGTCCCCAGCCTTGATCAGGTCCTGGTGAAACGTGTCTCAAGACTTGAGAAGGAGGTCCAAGAAGCAAAGAACAGAAGGGAAAACAATACTCGAGGAGTCAGGTTGGCACATCTCAAAATCAAGAATGTTGATTCATATGCTACAGAATCAAAGGAGAAGGTCGATTCCTGTTCTAGTGAAGGACCAGAGGAGAAAGAAAATGTTGACTTGAATAAGAATGCTGCAGAAAACATGGAGAAAAATGCTAATGCAGTGGAAACAAATAAGAAAGCTGGAACCGAAGGGGCTGAAGATAGTCTGGACAAGATCATGCTCAAACCAGTGCACTGGTTAGAAAGAGAGAAAAGGAAAGCCTTAGCAGAGGGAAACAATTTTGAATATCGTACACTTGAGAAGAAAAAGGGGGAAAACAGCATTACAGAATGTGAGAGTTTGGACAAAGTTTTGGTAAAACATGTATCCAGGCTGGAGAAAGAGAAGATGAAGATGAAGCTTGGTGCAGAAGAACCTGCTGAAATGAAGAGAAGTAAGGCAAAGCTGCATTCGCTTGTGGATGAAGCAGGTGGTTTGGACCAAATCTTGGTTAAACATAAATCAAGACTTGAGAGAGAAAAGGCCGCTGCTGCTCAACAACCAGAGGATCAGACTAGATTATCTGTGACTCGAAAACAAGCAAGGGAGAGAGAACTACAAGAACAATGGGGAGGTTTAGGCTTGGGAAACTCAATGAAGCCACATCAATCAAAACTTGAACTGGATAAGGCTGCTTGGATTAAAGCTGAACAAGAGGAAAAGCGGCAAGCTGTGGGATTCTCAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

794

Amino Acids

88.13

Weight (kDa)

8.55

Isoelectric Point (pI)

40.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005104)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49870 AT1G49870
fragaria_vesca	FvH4_2g03900 FvH4_2g03900 FvH4_2g03900 FvH4_2g03900 FvH4_2g03900
malus_domestica	MD05G1096200.v1.1 MD10G1102500.v1.1
prunus_persica	Prupe.8G140600_v2.0.a1
pyrus_communis	pycom05g09500 pycom10g08830
rosa_chinensis	RchiOBHm_Chr6g0252931 RchiOBHm_Chr6g0252961
rosa_laevigata	RLG00000015047
rosa_multiflora	Rmu_co8415545.1_g000001 Rmu_sc0002560.1_g000002 Rmu_sc0016103.1_g000002 Rmu_sc0016103.1_g000006 Rmu_sc0021616.1_g000001
rosa_roxburghii	Rroxscaffold_7G00212270
rosa_rugosa	Rorug05G0541600 Rorug05G0542200
rosa_samantha	Rh6AG055900 Rh6AG056200 Rh6BG050200 Rh6CG048600 Rh6DG044200
rosa_wichuraiana	Rw6G005070 Rw6G005130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2111
Acc36I	ACCTGC	2 cut(s)	2077, 2111
AccB1I	GGYRCC	1 cut(s)	53
AccB7I	CCANNNNNTGG	2 cut(s)	796, 2140
AccI	GTMKAC	2 cut(s)	533, 1037
AciI	CCGC	3 cut(s)	1208, 2178, 2356
AclWI	GGATC	3 cut(s)	754, 1012, 2208
AcoI	YGGCCR	1 cut(s)	765
AcsI	RAATTY	4 cut(s)	217, 1213, 1348, 1486
AcuI	CTGAAG	4 cut(s)	347, 450, 1358, 1869
AcyI	GRCGYC	2 cut(s)	54, 1410
AfaI	GTAC	3 cut(s)	1204, 1278, 1945
AfiI	CCNNNNNNNGG	5 cut(s)	695, 796, 1286, 1576, 2140
AflIII	ACRYGT	2 cut(s)	1591, 2014
AjnI	CCWGG	5 cut(s)	371, 1000, 1279, 1581, 2021
AjuI	GAANNNNNNNTTGG	2 cut(s)	317, 349
Alw21I	GWGCWC	2 cut(s)	92, 1887
Alw26I	GTCTC	7 cut(s)	43, 159, 227, 557, 1010, 1265, 1600
Alw44I	GTGCAC	1 cut(s)	1883
AlwI	GGATC	3 cut(s)	754, 1012, 2208
AlwNI	CAGNNNCTG	6 cut(s)	398, 743, 1007, 1274, 1505, 1582
Ama87I	CYCGRG	1 cut(s)	1650
AoxI	GGCC	5 cut(s)	765, 1239, 1338, 1476, 2175
ApaLI	GTGCAC	1 cut(s)	1883
ApoI	RAATTY	4 cut(s)	217, 1213, 1348, 1486
Asp700I	GAANNNNTTC	1 cut(s)	666
AspLEI	GCGC	1 cut(s)	56
AspS9I	GGNCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
AsuHPI	GGTGA	4 cut(s)	113, 254, 710, 1597
AsuII	TTCGAA	3 cut(s)	670, 1313, 1451
AvaI	CYCGRG	1 cut(s)	1650
AvaII	GGWCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
BaeGI	GKGCMC	1 cut(s)	1887
BanI	GGYRCC	1 cut(s)	53
BanII	GRGCYC	1 cut(s)	92
BarI	GAAGNNNNNNTAC	2 cut(s)	1021, 1053
Bbv12I	GWGCWC	2 cut(s)	92, 1887
BbvCI	CCTCAGC	1 cut(s)	272
BccI	CCATC	2 cut(s)	203, 1067
BceAI	ACGGC	2 cut(s)	67, 99
BciT130I	CCWGG	5 cut(s)	373, 1002, 1281, 1583, 2023
BciVI	GTATCC	1 cut(s)	2029
BclI	TGATCA	1 cut(s)	1573
BcoDI	GTCTC	7 cut(s)	43, 159, 227, 557, 1010, 1265, 1600
BfaI	CTAG	5 cut(s)	239, 1118, 1419, 1734, 2208
BfmI	CTRYAG	6 cut(s)	197, 423, 501, 942, 1701, 1782
BfoI	RGCGCY	1 cut(s)	57
BfuAI	ACCTGC	2 cut(s)	2077, 2111
BfuI	GTATCC	1 cut(s)	2029
Bme1390I	CCNGG	5 cut(s)	373, 1002, 1281, 1583, 2023
Bme18I	GGWCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
BmeT110I	CYCGRG	1 cut(s)	1650
BmgT120I	GGNCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
BmiI	GGNNCC	3 cut(s)	55, 149, 1837
BmrFI	CCNGG	5 cut(s)	373, 1002, 1281, 1583, 2023
BmrI	ACTGGG	1 cut(s)	1295
BmsI	GCATC	4 cut(s)	353, 455, 563, 798
BmuI	ACTGGG	1 cut(s)	1295
BplI	GAGNNNNNCTC	2 cut(s)	911, 943
BpmI	CTGGAG	2 cut(s)	839, 2048
Bpu10I	CCTNAGC	2 cut(s)	272, 1915
Bpu14I	TTCGAA	3 cut(s)	670, 1313, 1451
BpuEI	CTTGAG	5 cut(s)	914, 1582, 1625, 1970, 2183
Bsa29I	ATCGAT	1 cut(s)	1230
BsaBI	GATNNNNATC	1 cut(s)	249
BsaHI	GRCGYC	2 cut(s)	54, 1410
BsaI	GGTCTC	1 cut(s)	43
BsaJI	CCNNGG	4 cut(s)	7, 453, 972, 1341
BsaXI	ACNNNNNCTCC	2 cut(s)	1418, 1448
Bsc4I	CCNNNNNNNGG	5 cut(s)	695, 796, 1286, 1576, 2140
Bse1I	ACTGG	5 cut(s)	1242, 1290, 1880, 1892, 2319
Bse3DI	GCAATG	1 cut(s)	318
Bse8I	GATNNNNATC	1 cut(s)	249
BseBI	CCWGG	5 cut(s)	373, 1002, 1281, 1583, 2023
BseCI	ATCGAT	1 cut(s)	1230
BseDI	CCNNGG	4 cut(s)	7, 453, 972, 1341
BseGI	GGATG	4 cut(s)	449, 509, 1038, 2119
BseJI	GATNNNNATC	1 cut(s)	249
BseLI	CCNNNNNNNGG	5 cut(s)	695, 796, 1286, 1576, 2140
BseMI	GCAATG	1 cut(s)	318
BseMII	CTCAG	6 cut(s)	63, 74, 263, 705, 1005, 1398
BseNI	ACTGG	5 cut(s)	1242, 1290, 1880, 1892, 2319
BseRI	GAGGAG	4 cut(s)	126, 1371, 1668, 1763
BseSI	GKGCMC	1 cut(s)	1887
BseYI	CCCAGC	2 cut(s)	65, 1565
BsgI	GTGCAG	3 cut(s)	285, 469, 2079
BshFI	GGCC	5 cut(s)	767, 1241, 1340, 1478, 2177
BshNI	GGYRCC	1 cut(s)	53
BshVI	ATCGAT	1 cut(s)	1230
BsiHKAI	GWGCWC	2 cut(s)	92, 1887
BsiHKCI	CYCGRG	1 cut(s)	1650
BslFI	GGGAC	1 cut(s)	1547
BslI	CCNNNNNNNGG	5 cut(s)	695, 796, 1286, 1576, 2140
BsmAI	GTCTC	7 cut(s)	43, 159, 227, 557, 1010, 1265, 1600
BsmFI	GGGAC	1 cut(s)	1547
BsmI	GAATGC	2 cut(s)	1783, 2101
BsnI	GGCC	5 cut(s)	767, 1241, 1340, 1478, 2177
Bso31I	GGTCTC	1 cut(s)	43
BsoBI	CYCGRG	1 cut(s)	1650
Bsp119I	TTCGAA	3 cut(s)	670, 1313, 1451
Bsp1286I	GDGCHC	2 cut(s)	92, 1887
Bsp143I	GATC	6 cut(s)	746, 1004, 1329, 1573, 1866, 2200
BspACI	CCGC	3 cut(s)	1208, 2178, 2356
BspANI	GGCC	5 cut(s)	767, 1241, 1340, 1478, 2177
BspCNI	CTCAG	6 cut(s)	64, 73, 264, 706, 1006, 1397
BspDI	ATCGAT	1 cut(s)	1230
BspLI	GGNNCC	3 cut(s)	55, 149, 1837
BspMAI	CTGCAG	2 cut(s)	427, 1786
BspMI	ACCTGC	2 cut(s)	2077, 2111
BspPI	GGATC	3 cut(s)	754, 1012, 2208
BspT104I	TTCGAA	3 cut(s)	670, 1313, 1451
BspT107I	GGYRCC	1 cut(s)	53
BspTNI	GGTCTC	1 cut(s)	43
BsrDI	GCAATG	1 cut(s)	318
BsrI	ACTGG	5 cut(s)	1242, 1290, 1880, 1892, 2319
BssECI	CCNNGG	4 cut(s)	7, 453, 972, 1341
BssMI	GATC	6 cut(s)	746, 1004, 1329, 1573, 1866, 2200
BssNI	GRCGYC	2 cut(s)	54, 1410
BssT1I	CCWWGG	2 cut(s)	972, 1341
Bst2UI	CCWGG	5 cut(s)	373, 1002, 1281, 1583, 2023
Bst4CI	ACNGT	6 cut(s)	125, 405, 547, 763, 1276, 1507
Bst6I	CTCTTC	5 cut(s)	912, 934, 1467, 1537, 2075
BstACI	GRCGYC	2 cut(s)	54, 1410
BstBI	TTCGAA	3 cut(s)	670, 1313, 1451
BstC8I	GCNNGC	6 cut(s)	88, 117, 318, 494, 989, 2361
BstDSI	CCRYGG	1 cut(s)	453
BstENI	CCTNNNNNAGG	2 cut(s)	693, 1574
BstF5I	GGATG	4 cut(s)	449, 509, 1038, 2119
BstH2I	RGCGCY	1 cut(s)	57
BstHHI	GCGC	1 cut(s)	56
BstKTI	GATC	6 cut(s)	749, 1007, 1332, 1576, 1869, 2203
BstMAI	GTCTC	7 cut(s)	43, 159, 227, 557, 1010, 1265, 1600
BstMBI	GATC	6 cut(s)	746, 1004, 1329, 1573, 1866, 2200
BstMWI	GCNNNNNNNGC	8 cut(s)	296, 308, 317, 326, 431, 974, 2104, 2183
BstNI	CCWGG	5 cut(s)	373, 1002, 1281, 1583, 2023
BstNSI	RCATGY	1 cut(s)	2018
BstSCI	CCNGG	5 cut(s)	371, 1000, 1279, 1581, 2021
BstSFI	CTRYAG	6 cut(s)	197, 423, 501, 942, 1701, 1782
BstSLI	GKGCMC	1 cut(s)	1887
BstX2I	RGATCY	1 cut(s)	1004
BstXI	CCANNNNNNTGG	1 cut(s)	1887
BstYI	RGATCY	1 cut(s)	1004
Bsu15I	ATCGAT	1 cut(s)	1230
BsuI	GTATCC	1 cut(s)	2029
BsuRI	GGCC	5 cut(s)	767, 1241, 1340, 1478, 2177
BsuTUI	ATCGAT	1 cut(s)	1230
BtgI	CCRYGG	1 cut(s)	453
BtsCI	GGATG	4 cut(s)	449, 509, 1038, 2119
BtsI	GCAGTG	1 cut(s)	1818
BtsIMutI	CAGTG	4 cut(s)	768, 1818, 1885, 1887
BveI	ACCTGC	2 cut(s)	2077, 2111
Cac8I	GCNNGC	6 cut(s)	88, 117, 318, 494, 989, 2361
CaiI	CAGNNNCTG	6 cut(s)	398, 743, 1007, 1274, 1505, 1582
CfoI	GCGC	1 cut(s)	56
Cfr13I	GGNCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
ClaI	ATCGAT	1 cut(s)	1230
CseI	GACGC	1 cut(s)	1418
Csp6I	GTAC	3 cut(s)	1203, 1277, 1944
CspCI	CAANNNNNGTGG	2 cut(s)	928, 963
CviAII	CATG	9 cut(s)	214, 348, 466, 886, 1141, 1307, 1792, 1870, 2015
CviQI	GTAC	3 cut(s)	1203, 1277, 1944
DinI	GGCGCC	1 cut(s)	55
DpnI	GATC	6 cut(s)	748, 1006, 1331, 1575, 1868, 2202
DpnII	GATC	6 cut(s)	746, 1004, 1329, 1573, 1866, 2200
DraI	TTTAAA	2 cut(s)	658, 963
EaeI	YGGCCR	1 cut(s)	765
Eam1104I	CTCTTC	5 cut(s)	912, 934, 1467, 1537, 2075
EarI	CTCTTC	5 cut(s)	912, 934, 1467, 1537, 2075
Ecl136II	GAGCTC	1 cut(s)	90
Eco130I	CCWWGG	2 cut(s)	972, 1341
Eco24I	GRGCYC	1 cut(s)	92
Eco31I	GGTCTC	1 cut(s)	43
Eco47I	GGWCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
Eco53kI	GAGCTC	1 cut(s)	90
Eco57I	CTGAAG	4 cut(s)	347, 450, 1358, 1869
Eco88I	CYCGRG	1 cut(s)	1650
EcoICRI	GAGCTC	1 cut(s)	90
EcoNI	CCTNNNNNAGG	2 cut(s)	693, 1574
EcoO109I	RGGNCCY	1 cut(s)	1579
EcoRII	CCWGG	5 cut(s)	371, 1000, 1279, 1581, 2021
EcoT14I	CCWWGG	2 cut(s)	972, 1341
EcoT38I	GRGCYC	1 cut(s)	92
EgeI	GGCGCC	1 cut(s)	55
EheI	GGCGCC	1 cut(s)	55
ErhI	CCWWGG	2 cut(s)	972, 1341
FaeI	CATG	9 cut(s)	217, 351, 469, 889, 1144, 1310, 1795, 1873, 2018
FalI	AAGNNNNNCTT	4 cut(s)	651, 683, 835, 867
FaqI	GGGAC	1 cut(s)	1547
FatI	CATG	9 cut(s)	213, 347, 465, 885, 1140, 1306, 1791, 1869, 2014
FauI	CCCGC	1 cut(s)	1201
FauNDI	CATATG	2 cut(s)	1405, 1696
FbaI	TGATCA	1 cut(s)	1573
FblI	GTMKAC	2 cut(s)	533, 1037
FokI	GGATG	4 cut(s)	436, 496, 1045, 2126
FriOI	GRGCYC	1 cut(s)	92
FspBI	CTAG	5 cut(s)	239, 1118, 1419, 1734, 2208
GlaI	GCGC	1 cut(s)	55
GsaI	CCCAGC	2 cut(s)	69, 1569
GsuI	CTGGAG	2 cut(s)	839, 2048
HaeII	RGCGCY	1 cut(s)	57
HaeIII	GGCC	5 cut(s)	767, 1241, 1340, 1478, 2177
HgaI	GACGC	1 cut(s)	1418
HhaI	GCGC	1 cut(s)	56
Hin1I	GRCGYC	2 cut(s)	54, 1410
Hin1II	CATG	9 cut(s)	217, 351, 469, 889, 1144, 1310, 1795, 1873, 2018
Hin6I	GCGC	1 cut(s)	54
HinP1I	GCGC	1 cut(s)	54
HincII	GTYRAC	1 cut(s)	1765
HindII	GTYRAC	1 cut(s)	1765
HindIII	AAGCTT	4 cut(s)	432, 860, 1148, 2051
HphI	GGTGA	4 cut(s)	113, 254, 710, 1597
Hpy166II	GTNNAC	8 cut(s)	415, 534, 580, 883, 1038, 1765, 1885, 1946
Hpy8I	GTNNAC	8 cut(s)	415, 534, 580, 883, 1038, 1765, 1885, 1946
HpyCH4III	ACNGT	6 cut(s)	125, 405, 547, 763, 1276, 1507
HpyCH4IV	ACGT	1 cut(s)	1591
HpyF10VI	GCNNNNNNNGC	8 cut(s)	296, 308, 317, 326, 431, 974, 2104, 2183
HpySE526I	ACGT	1 cut(s)	1591
Hsp92I	GRCGYC	2 cut(s)	54, 1410
Hsp92II	CATG	9 cut(s)	217, 351, 469, 889, 1144, 1310, 1795, 1873, 2018
HspAI	GCGC	1 cut(s)	54
KasI	GGCGCC	1 cut(s)	53
Ksp22I	TGATCA	1 cut(s)	1573
Kzo9I	GATC	6 cut(s)	746, 1004, 1329, 1573, 1866, 2200
LmnI	GCTCC	2 cut(s)	95, 1046
LweI	GCATC	4 cut(s)	353, 455, 563, 798
MaeI	CTAG	5 cut(s)	239, 1118, 1419, 1734, 2208
MaeII	ACGT	1 cut(s)	1591
MaeIII	GTNAC	3 cut(s)	547, 616, 2218
MalI	GATC	6 cut(s)	748, 1006, 1331, 1575, 1868, 2202
MboI	GATC	6 cut(s)	746, 1004, 1329, 1573, 1866, 2200
MfeI	CAATTG	1 cut(s)	142
MflI	RGATCY	1 cut(s)	1004
MhlI	GDGCHC	2 cut(s)	92, 1887
Mly113I	GGCGCC	1 cut(s)	54
MlyI	GAGTC	6 cut(s)	83, 161, 229, 1199, 1665, 2215
MmeI	TCCRAC	1 cut(s)	66
MroXI	GAANNNNTTC	1 cut(s)	666
MseI	TTAA	9 cut(s)	108, 221, 657, 864, 962, 1134, 1440, 2145, 2334
MslI	CAYNNNNRTG	1 cut(s)	349
MspA1I	CMGCKG	2 cut(s)	428, 2180
MspR9I	CCNGG	5 cut(s)	373, 1002, 1281, 1583, 2023
MunI	CAATTG	1 cut(s)	142
Mva1269I	GAATGC	2 cut(s)	1783, 2101
MvaI	CCWGG	5 cut(s)	373, 1002, 1281, 1583, 2023
MwoI	GCNNNNNNNGC	8 cut(s)	296, 308, 317, 326, 431, 974, 2104, 2183
NarI	GGCGCC	1 cut(s)	54
NdeI	CATATG	2 cut(s)	1405, 1696
NdeII	GATC	6 cut(s)	746, 1004, 1329, 1573, 1866, 2200
NlaIII	CATG	9 cut(s)	217, 351, 469, 889, 1144, 1310, 1795, 1873, 2018
NlaIV	GGNNCC	3 cut(s)	55, 149, 1837
NmeAIII	GCCGAG	1 cut(s)	793
NmuCI	GTSAC	2 cut(s)	547, 2218
NspI	RCATGY	1 cut(s)	2018
NspV	TTCGAA	3 cut(s)	670, 1313, 1451
PaeR7I	CTCGAG	1 cut(s)	1650
PaqCI	CACCTGC	1 cut(s)	2111
PciI	ACATGT	1 cut(s)	2014
PcsI	WCGNNNNNNNCGW	1 cut(s)	83
PctI	GAATGC	2 cut(s)	1783, 2101
PdmI	GAANNNNTTC	1 cut(s)	666
PflMI	CCANNNNNTGG	2 cut(s)	796, 2140
PfoI	TCCNGGA	1 cut(s)	1000
PleI	GAGTC	6 cut(s)	82, 161, 229, 1198, 1664, 2215
PluTI	GGCGCC	1 cut(s)	57
PpsI	GAGTC	6 cut(s)	82, 161, 229, 1198, 1664, 2215
PpuMI	RGGWCCY	1 cut(s)	1579
PscI	ACATGT	1 cut(s)	2014
Psp124BI	GAGCTC	1 cut(s)	92
Psp5II	RGGWCCY	1 cut(s)	1579
Psp6I	CCWGG	5 cut(s)	371, 1000, 1279, 1581, 2021
PspFI	CCCAGC	2 cut(s)	65, 1565
PspGI	CCWGG	5 cut(s)	371, 1000, 1279, 1581, 2021
PspN4I	GGNNCC	3 cut(s)	55, 149, 1837
PspPI	GGNCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
PspPPI	RGGWCCY	1 cut(s)	1579
PspXI	VCTCGAGB	1 cut(s)	1650
PstI	CTGCAG	2 cut(s)	427, 1786
PstNI	CAGNNNCTG	6 cut(s)	398, 743, 1007, 1274, 1505, 1582
PsuI	RGATCY	1 cut(s)	1004
PvuII	CAGCTG	1 cut(s)	428
RsaI	GTAC	3 cut(s)	1204, 1278, 1945
RsaNI	GTAC	3 cut(s)	1203, 1277, 1944
RseI	CAYNNNNRTG	1 cut(s)	349
SacI	GAGCTC	1 cut(s)	92
SaqAI	TTAA	9 cut(s)	108, 221, 657, 864, 962, 1134, 1440, 2145, 2334
Sau3AI	GATC	6 cut(s)	746, 1004, 1329, 1573, 1866, 2200
Sau96I	GGNCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
SchI	GAGTC	6 cut(s)	83, 161, 229, 1199, 1665, 2215
ScrFI	CCNGG	5 cut(s)	373, 1002, 1281, 1583, 2023
SduI	GDGCHC	2 cut(s)	92, 1887
SfaNI	GCATC	4 cut(s)	353, 455, 563, 798
SfcI	CTRYAG	6 cut(s)	197, 423, 501, 942, 1701, 1782
SfoI	GGCGCC	1 cut(s)	55
Sfr274I	CTCGAG	1 cut(s)	1650
SfuI	TTCGAA	3 cut(s)	670, 1313, 1451
SinI	GGWCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
SlaI	CTCGAG	1 cut(s)	1650
SmiMI	CAYNNNNRTG	1 cut(s)	349
SmlI	CTYRAG	6 cut(s)	893, 1597, 1604, 1650, 1949, 2162
SmoI	CTYRAG	6 cut(s)	893, 1597, 1604, 1650, 1949, 2162
SsiI	CCGC	3 cut(s)	1208, 2178, 2356
SspDI	GGCGCC	1 cut(s)	53
SspMI	CTAG	5 cut(s)	239, 1118, 1419, 1734, 2208
SstI	GAGCTC	1 cut(s)	92
StyD4I	CCNGG	5 cut(s)	371, 1000, 1279, 1581, 2021
StyI	CCWWGG	2 cut(s)	972, 1341
TaaI	ACNGT	6 cut(s)	125, 405, 547, 763, 1276, 1507
TaiI	ACGT	1 cut(s)	1594
TaqI	TCGA	9 cut(s)	355, 670, 1230, 1313, 1451, 1470, 1651, 1722, 2224
TauI	GCSGC	2 cut(s)	2180, 2359
Tru1I	TTAA	9 cut(s)	108, 221, 657, 864, 962, 1134, 1440, 2145, 2334
Tru9I	TTAA	9 cut(s)	108, 221, 657, 864, 962, 1134, 1440, 2145, 2334
TscAI	CASTG	4 cut(s)	768, 1818, 1887, 1892
TseFI	GTSAC	2 cut(s)	547, 2218
Tsp45I	GTSAC	2 cut(s)	547, 2218
TspDTI	ATGAA	7 cut(s)	230, 1683, 2057, 2063, 2093, 2130, 2303
TspGWI	ACGGA	2 cut(s)	337, 442
TspRI	CASTG	4 cut(s)	768, 1818, 1887, 1892
Van91I	CCANNNNNTGG	2 cut(s)	796, 2140
VneI	GTGCAC	1 cut(s)	1883
VpaK11BI	GGWCC	6 cut(s)	4, 998, 1579, 1615, 1742, 2131
XagI	CCTNNNNNAGG	2 cut(s)	693, 1574
XapI	RAATTY	4 cut(s)	217, 1213, 1348, 1486
XbaI	TCTAGA	1 cut(s)	1117
XceI	RCATGY	1 cut(s)	2018
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1420
XhoI	CTCGAG	1 cut(s)	1650
XmiI	GTMKAC	2 cut(s)	533, 1037
XmnI	GAANNNNTTC	1 cut(s)	666
XspI	CTAG	5 cut(s)	239, 1118, 1419, 1734, 2208

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.