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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49870 AT1G49870 |
| fragaria_vesca | FvH4_2g03900 FvH4_2g03900 FvH4_2g03900 FvH4_2g03900 FvH4_2g03900 |
| malus_domestica | MD05G1096200.v1.1 MD10G1102500.v1.1 |
| prunus_persica | Prupe.8G140600_v2.0.a1 |
| pyrus_communis | pycom05g09500 pycom10g08830 |
| rosa_chinensis | RchiOBHm_Chr6g0252931 RchiOBHm_Chr6g0252961 |
| rosa_laevigata | RLG00000015047 |
| rosa_multiflora | Rmu_co8415545.1_g000001 Rmu_sc0002560.1_g000002 Rmu_sc0016103.1_g000002 Rmu_sc0016103.1_g000006 Rmu_sc0021616.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00212270 |
| rosa_rugosa | Rorug05G0541600 Rorug05G0542200 |
| rosa_samantha | Rh6AG055900 Rh6AG056200 Rh6BG050200 Rh6CG048600 Rh6DG044200 |
| rosa_wichuraiana | Rw6G005070 Rw6G005130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1156 |
| Acc36I | ACCTGC | 1 cut(s) | 1156 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 886, 2011, 2035, 2257 |
| AccBSI | CCGCTC | 1 cut(s) | 1136 |
| AccI | GTMKAC | 1 cut(s) | 617 |
| AccII | CGCG | 2 cut(s) | 110, 235 |
| AciI | CCGC | 6 cut(s) | 108, 233, 335, 1136, 1904, 2442 |
| AclWI | GGATC | 3 cut(s) | 844, 897, 1828 |
| AcuI | CTGAAG | 6 cut(s) | 798, 1138, 1394, 1922, 1989, 2211 |
| AcyI | GRCGYC | 2 cut(s) | 63, 96 |
| AfaI | GTAC | 2 cut(s) | 1722, 2482 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 122, 886, 1358, 2011, 2035, 2257 |
| AflIII | ACRYGT | 4 cut(s) | 1621, 1663, 2134, 2413 |
| AjnI | CCWGG | 3 cut(s) | 452, 1351, 1356 |
| Alw26I | GTCTC | 8 cut(s) | 140, 308, 641, 1106, 1630, 1672, 1958, 2422 |
| AlwI | GGATC | 3 cut(s) | 844, 897, 1828 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 833 |
| AoxI | GGCC | 4 cut(s) | 1311, 1354, 1548, 2439 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 227, 1347, 1443 |
| AspS9I | GGNCC | 3 cut(s) | 4, 210, 2248 |
| AsuHPI | GGTGA | 2 cut(s) | 1180, 1893 |
| AsuII | TTCGAA | 1 cut(s) | 1392 |
| AvaII | GGWCC | 3 cut(s) | 4, 210, 2248 |
| AxyI | CCTNAGG | 1 cut(s) | 353 |
| BanII | GRGCYC | 1 cut(s) | 116 |
| BbsI | GAAGAC | 2 cut(s) | 1890, 2184 |
| BccI | CCATC | 5 cut(s) | 284, 1154, 1870, 1942, 1967 |
| BceAI | ACGGC | 1 cut(s) | 50 |
| BciT130I | CCWGG | 3 cut(s) | 454, 1353, 1358 |
| BciVI | GTATCC | 1 cut(s) | 865 |
| BclI | TGATCA | 1 cut(s) | 1093 |
| BcoDI | GTCTC | 8 cut(s) | 140, 308, 641, 1106, 1630, 1672, 1958, 2422 |
| BfaI | CTAG | 5 cut(s) | 150, 1205, 1643, 1872, 1914 |
| BfmI | CTRYAG | 4 cut(s) | 278, 504, 678, 1032 |
| BfuAI | ACCTGC | 1 cut(s) | 1156 |
| BfuI | GTATCC | 1 cut(s) | 865 |
| BglII | AGATCT | 1 cut(s) | 745 |
| BlpI | GCTNAGC | 1 cut(s) | 2304 |
| Bme1390I | CCNGG | 3 cut(s) | 454, 1353, 1358 |
| Bme18I | GGWCC | 3 cut(s) | 4, 210, 2248 |
| BmgT120I | GGNCC | 3 cut(s) | 4, 210, 2248 |
| BmiI | GGNNCC | 1 cut(s) | 230 |
| BmrFI | CCNGG | 3 cut(s) | 454, 1353, 1358 |
| BmsI | GCATC | 7 cut(s) | 39, 434, 458, 647, 969, 1471, 1781 |
| BpiI | GAAGAC | 2 cut(s) | 1890, 2184 |
| BpmI | CTGGAG | 1 cut(s) | 2168 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2392 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2304 |
| Bpu14I | TTCGAA | 1 cut(s) | 1392 |
| BpuEI | CTTGAG | 4 cut(s) | 1004, 1259, 1654, 1697 |
| BsaBI | GATNNNNATC | 2 cut(s) | 330, 888 |
| BsaHI | GRCGYC | 2 cut(s) | 63, 96 |
| BsaI | GGTCTC | 1 cut(s) | 1106 |
| BsaJI | CCNNGG | 4 cut(s) | 7, 569, 1357, 2034 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 122, 886, 1358, 2011, 2035, 2257 |
| Bse1I | ACTGG | 6 cut(s) | 230, 420, 2000, 2012, 2151, 2488 |
| Bse21I | CCTNAGG | 1 cut(s) | 353 |
| Bse3DI | GCAATG | 2 cut(s) | 399, 2046 |
| Bse8I | GATNNNNATC | 2 cut(s) | 330, 888 |
| BseBI | CCWGG | 3 cut(s) | 454, 1353, 1358 |
| BseDI | CCNNGG | 4 cut(s) | 7, 569, 1357, 2034 |
| BseGI | GGATG | 4 cut(s) | 449, 593, 1861, 1881 |
| BseJI | GATNNNNATC | 2 cut(s) | 330, 888 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 122, 886, 1358, 2011, 2035, 2257 |
| BseMI | GCAATG | 2 cut(s) | 399, 2046 |
| BseMII | CTCAG | 6 cut(s) | 795, 1101, 1641, 1739, 1803, 2318 |
| BseNI | ACTGG | 6 cut(s) | 230, 420, 2000, 2012, 2151, 2488 |
| BseRI | GAGGAG | 5 cut(s) | 207, 624, 1009, 1877, 2480 |
| BseYI | CCCAGC | 1 cut(s) | 1637 |
| BsgI | GTGCAG | 2 cut(s) | 366, 1938 |
| Bsh1236I | CGCG | 2 cut(s) | 110, 235 |
| BshFI | GGCC | 4 cut(s) | 1313, 1356, 1550, 2441 |
| BslFI | GGGAC | 1 cut(s) | 260 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 122, 886, 1358, 2011, 2035, 2257 |
| BsmAI | GTCTC | 8 cut(s) | 140, 308, 641, 1106, 1630, 1672, 1958, 2422 |
| BsmFI | GGGAC | 1 cut(s) | 260 |
| BsmI | GAATGC | 2 cut(s) | 438, 1867 |
| BsnI | GGCC | 4 cut(s) | 1313, 1356, 1550, 2441 |
| Bso31I | GGTCTC | 1 cut(s) | 1106 |
| Bsp119I | TTCGAA | 1 cut(s) | 1392 |
| Bsp1286I | GDGCHC | 1 cut(s) | 116 |
| Bsp1407I | TGTACA | 1 cut(s) | 1720 |
| Bsp143I | GATC | 7 cut(s) | 120, 267, 745, 836, 889, 1093, 1820 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2304 |
| BspACI | CCGC | 6 cut(s) | 108, 233, 335, 1136, 1904, 2442 |
| BspANI | GGCC | 4 cut(s) | 1313, 1356, 1550, 2441 |
| BspCNI | CTCAG | 6 cut(s) | 796, 1102, 1640, 1740, 1804, 2317 |
| BspFNI | CGCG | 2 cut(s) | 110, 235 |
| BspHI | TCATGA | 1 cut(s) | 1090 |
| BspLI | GGNNCC | 1 cut(s) | 230 |
| BspMAI | CTGCAG | 3 cut(s) | 282, 508, 682 |
| BspMI | ACCTGC | 1 cut(s) | 1156 |
| BspPI | GGATC | 3 cut(s) | 844, 897, 1828 |
| BspT104I | TTCGAA | 1 cut(s) | 1392 |
| BspTNI | GGTCTC | 1 cut(s) | 1106 |
| BsrBI | CCGCTC | 1 cut(s) | 1136 |
| BsrDI | GCAATG | 2 cut(s) | 399, 2046 |
| BsrGI | TGTACA | 1 cut(s) | 1720 |
| BsrI | ACTGG | 6 cut(s) | 230, 420, 2000, 2012, 2151, 2488 |
| BssECI | CCNNGG | 4 cut(s) | 7, 569, 1357, 2034 |
| BssMI | GATC | 7 cut(s) | 120, 267, 745, 836, 889, 1093, 1820 |
| BssNI | GRCGYC | 2 cut(s) | 63, 96 |
| BssT1I | CCWWGG | 1 cut(s) | 2034 |
| Bst2UI | CCWGG | 3 cut(s) | 454, 1353, 1358 |
| Bst4CI | ACNGT | 4 cut(s) | 601, 631, 1300, 2172 |
| Bst6I | CTCTTC | 5 cut(s) | 254, 516, 1401, 1539, 2465 |
| BstACI | GRCGYC | 2 cut(s) | 63, 96 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1778 |
| BstAUI | TGTACA | 1 cut(s) | 1720 |
| BstBI | TTCGAA | 1 cut(s) | 1392 |
| BstC8I | GCNNGC | 2 cut(s) | 112, 1085 |
| BstF5I | GGATG | 4 cut(s) | 449, 593, 1861, 1881 |
| BstFNI | CGCG | 2 cut(s) | 110, 235 |
| BstKTI | GATC | 7 cut(s) | 123, 270, 748, 839, 892, 1096, 1823 |
| BstMAI | GTCTC | 8 cut(s) | 140, 308, 641, 1106, 1630, 1672, 1958, 2422 |
| BstMBI | GATC | 7 cut(s) | 120, 267, 745, 836, 889, 1093, 1820 |
| BstNI | CCWGG | 3 cut(s) | 454, 1353, 1358 |
| BstNSI | RCATGY | 5 cut(s) | 1625, 1667, 2138, 2241, 2417 |
| BstSCI | CCNGG | 3 cut(s) | 452, 1351, 1356 |
| BstSFI | CTRYAG | 4 cut(s) | 278, 504, 678, 1032 |
| BstUI | CGCG | 2 cut(s) | 110, 235 |
| BstV2I | GAAGAC | 2 cut(s) | 1890, 2184 |
| BstX2I | RGATCY | 1 cut(s) | 745 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2007 |
| BstYI | RGATCY | 1 cut(s) | 745 |
| Bsu36I | CCTNAGG | 1 cut(s) | 353 |
| BsuI | GTATCC | 1 cut(s) | 865 |
| BsuRI | GGCC | 4 cut(s) | 1313, 1356, 1550, 2441 |
| BtsCI | GGATG | 4 cut(s) | 449, 593, 1861, 1881 |
| BtsI | GCAGTG | 1 cut(s) | 2098 |
| BtsIMutI | CAGTG | 4 cut(s) | 413, 597, 2005, 2098 |
| BveI | ACCTGC | 1 cut(s) | 1156 |
| Cac8I | GCNNGC | 2 cut(s) | 112, 1085 |
| CaiI | CAGNNNCTG | 1 cut(s) | 833 |
| CciI | TCATGA | 1 cut(s) | 1090 |
| Cfr13I | GGNCC | 3 cut(s) | 4, 210, 2248 |
| CseI | GACGC | 2 cut(s) | 71, 104 |
| Csp6I | GTAC | 2 cut(s) | 1721, 2481 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 516, 551, 1018, 1053 |
| CviQI | GTAC | 2 cut(s) | 1721, 2481 |
| DpnI | GATC | 7 cut(s) | 122, 269, 747, 838, 891, 1095, 1822 |
| DpnII | GATC | 7 cut(s) | 120, 267, 745, 836, 889, 1093, 1820 |
| DraI | TTTAAA | 1 cut(s) | 1053 |
| Eam1104I | CTCTTC | 5 cut(s) | 254, 516, 1401, 1539, 2465 |
| EarI | CTCTTC | 5 cut(s) | 254, 516, 1401, 1539, 2465 |
| Eco130I | CCWWGG | 1 cut(s) | 2034 |
| Eco147I | AGGCCT | 1 cut(s) | 1356 |
| Eco24I | GRGCYC | 1 cut(s) | 116 |
| Eco31I | GGTCTC | 1 cut(s) | 1106 |
| Eco47I | GGWCC | 3 cut(s) | 4, 210, 2248 |
| Eco57I | CTGAAG | 6 cut(s) | 798, 1138, 1394, 1922, 1989, 2211 |
| Eco81I | CCTNAGG | 1 cut(s) | 353 |
| EcoO109I | RGGNCCY | 1 cut(s) | 210 |
| EcoRI | GAATTC | 2 cut(s) | 166, 737 |
| EcoRII | CCWGG | 3 cut(s) | 452, 1351, 1356 |
| EcoT14I | CCWWGG | 1 cut(s) | 2034 |
| EcoT38I | GRGCYC | 1 cut(s) | 116 |
| ErhI | CCWWGG | 1 cut(s) | 2034 |
| FaqI | GGGAC | 1 cut(s) | 260 |
| FauI | CCCGC | 1 cut(s) | 240 |
| FauNDI | CATATG | 1 cut(s) | 2226 |
| FbaI | TGATCA | 1 cut(s) | 1093 |
| FblI | GTMKAC | 1 cut(s) | 617 |
| FokI | GGATG | 4 cut(s) | 436, 580, 1868, 1888 |
| FriOI | GRGCYC | 1 cut(s) | 116 |
| FspBI | CTAG | 5 cut(s) | 150, 1205, 1643, 1872, 1914 |
| GsaI | CCCAGC | 1 cut(s) | 1641 |
| GsuI | CTGGAG | 1 cut(s) | 2168 |
| HaeIII | GGCC | 4 cut(s) | 1313, 1356, 1550, 2441 |
| HgaI | GACGC | 2 cut(s) | 71, 104 |
| Hin1I | GRCGYC | 2 cut(s) | 63, 96 |
| HincII | GTYRAC | 1 cut(s) | 1281 |
| HindII | GTYRAC | 1 cut(s) | 1281 |
| HindIII | AAGCTT | 4 cut(s) | 513, 950, 1085, 2389 |
| HphI | GGTGA | 2 cut(s) | 1180, 1893 |
| Hpy166II | GTNNAC | 6 cut(s) | 618, 810, 1281, 1430, 1457, 2005 |
| Hpy8I | GTNNAC | 6 cut(s) | 618, 810, 1281, 1430, 1457, 2005 |
| Hpy99I | CGWCG | 2 cut(s) | 65, 98 |
| HpyCH4III | ACNGT | 4 cut(s) | 601, 631, 1300, 2172 |
| HpyCH4IV | ACGT | 1 cut(s) | 660 |
| HpySE526I | ACGT | 1 cut(s) | 660 |
| Hsp92I | GRCGYC | 2 cut(s) | 63, 96 |
| Ksp22I | TGATCA | 1 cut(s) | 1093 |
| Kzo9I | GATC | 7 cut(s) | 120, 267, 745, 836, 889, 1093, 1820 |
| LmnI | GCTCC | 4 cut(s) | 756, 1133, 1864, 1879 |
| LweI | GCATC | 7 cut(s) | 39, 434, 458, 647, 969, 1471, 1781 |
| MaeI | CTAG | 5 cut(s) | 150, 1205, 1643, 1872, 1914 |
| MaeII | ACGT | 1 cut(s) | 660 |
| MaeIII | GTNAC | 4 cut(s) | 631, 1583, 2095, 2335 |
| MalI | GATC | 7 cut(s) | 122, 269, 747, 838, 891, 1095, 1822 |
| MbiI | CCGCTC | 1 cut(s) | 1136 |
| MboI | GATC | 7 cut(s) | 120, 267, 745, 836, 889, 1093, 1820 |
| MflI | RGATCY | 1 cut(s) | 745 |
| MhlI | GDGCHC | 1 cut(s) | 116 |
| MlyI | GAGTC | 2 cut(s) | 242, 623 |
| MmeI | TCCRAC | 2 cut(s) | 102, 1992 |
| MroXI | GAANNNNTTC | 3 cut(s) | 227, 1347, 1443 |
| MslI | CAYNNNNRTG | 2 cut(s) | 35, 430 |
| MspA1I | CMGCKG | 3 cut(s) | 484, 533, 683 |
| MspR9I | CCNGG | 3 cut(s) | 454, 1353, 1358 |
| Mva1269I | GAATGC | 2 cut(s) | 438, 1867 |
| MvaI | CCWGG | 3 cut(s) | 454, 1353, 1358 |
| MvnI | CGCG | 2 cut(s) | 110, 235 |
| NdeI | CATATG | 1 cut(s) | 2226 |
| NdeII | GATC | 7 cut(s) | 120, 267, 745, 836, 889, 1093, 1820 |
| NlaIV | GGNNCC | 1 cut(s) | 230 |
| NmuCI | GTSAC | 2 cut(s) | 631, 1583 |
| NspI | RCATGY | 5 cut(s) | 1625, 1667, 2138, 2241, 2417 |
| NspV | TTCGAA | 1 cut(s) | 1392 |
| PagI | TCATGA | 1 cut(s) | 1090 |
| PaqCI | CACCTGC | 1 cut(s) | 1156 |
| PceI | AGGCCT | 1 cut(s) | 1356 |
| PciI | ACATGT | 4 cut(s) | 1621, 1663, 2134, 2413 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 107 |
| PctI | GAATGC | 2 cut(s) | 438, 1867 |
| PdmI | GAANNNNTTC | 3 cut(s) | 227, 1347, 1443 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 886, 2011, 2035, 2257 |
| PfoI | TCCNGGA | 1 cut(s) | 452 |
| PleI | GAGTC | 2 cut(s) | 242, 622 |
| PpsI | GAGTC | 2 cut(s) | 242, 622 |
| PpuMI | RGGWCCY | 1 cut(s) | 210 |
| PscI | ACATGT | 4 cut(s) | 1621, 1663, 2134, 2413 |
| Psp5II | RGGWCCY | 1 cut(s) | 210 |
| Psp6I | CCWGG | 3 cut(s) | 452, 1351, 1356 |
| PspFI | CCCAGC | 1 cut(s) | 1637 |
| PspGI | CCWGG | 3 cut(s) | 452, 1351, 1356 |
| PspN4I | GGNNCC | 1 cut(s) | 230 |
| PspPI | GGNCC | 3 cut(s) | 4, 210, 2248 |
| PspPPI | RGGWCCY | 1 cut(s) | 210 |
| PstI | CTGCAG | 3 cut(s) | 282, 508, 682 |
| PstNI | CAGNNNCTG | 1 cut(s) | 833 |
| PsuI | RGATCY | 1 cut(s) | 745 |
| PvuII | CAGCTG | 3 cut(s) | 484, 533, 683 |
| RsaI | GTAC | 2 cut(s) | 1722, 2482 |
| RsaNI | GTAC | 2 cut(s) | 1721, 2481 |
| RseI | CAYNNNNRTG | 2 cut(s) | 35, 430 |
| Sau3AI | GATC | 7 cut(s) | 120, 267, 745, 836, 889, 1093, 1820 |
| Sau96I | GGNCC | 3 cut(s) | 4, 210, 2248 |
| SchI | GAGTC | 2 cut(s) | 242, 623 |
| ScrFI | CCNGG | 3 cut(s) | 454, 1353, 1358 |
| SduI | GDGCHC | 1 cut(s) | 116 |
| SfaNI | GCATC | 7 cut(s) | 39, 434, 458, 647, 969, 1471, 1781 |
| SfcI | CTRYAG | 4 cut(s) | 278, 504, 678, 1032 |
| SfuI | TTCGAA | 1 cut(s) | 1392 |
| SinI | GGWCC | 3 cut(s) | 4, 210, 2248 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 35, 430 |
| SmlI | CTYRAG | 4 cut(s) | 983, 1238, 1669, 1676 |
| SmoI | CTYRAG | 4 cut(s) | 983, 1238, 1669, 1676 |
| SseBI | AGGCCT | 1 cut(s) | 1356 |
| SsiI | CCGC | 6 cut(s) | 108, 233, 335, 1136, 1904, 2442 |
| SspMI | CTAG | 5 cut(s) | 150, 1205, 1643, 1872, 1914 |
| StuI | AGGCCT | 1 cut(s) | 1356 |
| StyD4I | CCNGG | 3 cut(s) | 452, 1351, 1356 |
| StyI | CCWWGG | 1 cut(s) | 2034 |
| TaaI | ACNGT | 4 cut(s) | 601, 631, 1300, 2172 |
| TaiI | ACGT | 1 cut(s) | 663 |
| TaqI | TCGA | 4 cut(s) | 158, 309, 1392, 2420 |
| TatI | WGTACW | 1 cut(s) | 1720 |
| TauI | GCSGC | 2 cut(s) | 1139, 2444 |
| TscAI | CASTG | 4 cut(s) | 420, 604, 2012, 2098 |
| TseFI | GTSAC | 2 cut(s) | 631, 1583 |
| Tsp45I | GTSAC | 2 cut(s) | 631, 1583 |
| TspDTI | ATGAA | 9 cut(s) | 311, 750, 1026, 1079, 1740, 1755, 1902, 2177, 2420 |
| TspGWI | ACGGA | 3 cut(s) | 25, 1082, 1298 |
| TspRI | CASTG | 4 cut(s) | 420, 604, 2012, 2098 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 886, 2011, 2035, 2257 |
| VpaK11BI | GGWCC | 3 cut(s) | 4, 210, 2248 |
| XbaI | TCTAGA | 1 cut(s) | 1204 |
| XceI | RCATGY | 5 cut(s) | 1625, 1667, 2138, 2241, 2417 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1354, 1492 |
| XmiI | GTMKAC | 1 cut(s) | 617 |
| XmnI | GAANNNNTTC | 3 cut(s) | 227, 1347, 1443 |
| XspI | CTAG | 5 cut(s) | 150, 1205, 1643, 1872, 1914 |