Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0010289

Physical Location & Seq

Genomic Coordinates Forward (+)

3346471 .. 3349664

Gene Structure 3194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g04280.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGAAGAACCAAGTTCTCTTGCATCTTTCACTTTTACTATTTCTCCTAATAGTCCCCATTGTAGCTCAACCATTTGCATGTGACACCAAAGCTTCCACTAGCCAATTTCCCTTCTGCAACACTTCTCTGCCTTACGAGGATCGAGCCAAGGACTTGGTCTCACGCCTCACTCTCCAAGAAAAGGTCCAACAATTAGTGGATAGCTCCACAGGCATAACTCGGCTAGGTGTGCCTAAATATGGGTGGTGGTCCGAGGCACTCCATGGTGTCTCAAACGTTGGCCGAGGTGCGACTCGCTTTAATGCCACGGTGCCTGGTGCCACTAGTTTCCCTGCAGTGATTTTATCCGCTGCGAGTTTTAATGAATCGTTGTGGTTAAGGATGGGGCAAGTTGTGTCAACCGAGGCTCGAGCCATGTACAATTTGGGTCTAGCCGGGTTGACATATTGGAGTCCTAATGTCAATGTTTTCCGTGACCCAAGATGGGGTCGAGCACAAGAGACACCGGGAGAGGACCCCTTAGTGGTGTCAAATTATGCAGTGAACTATGTCAAGGGCCTGCAAGACGTTGGTGAGAGCAATGCCACTGGTGATAGGCTCAAGGTGTCAAGCTGCTGCAAGCATTACACTGCTTATGATGTTGATAATTGGAAAGGTGTTGATAGATTTCACTTTGATGCTCAGGTGACAAAGCAGGACATGGAAGACACATATCAGCCACCATTCAGAAGCTGTGTGCAGGAGGGCCATGTCAGCAGTGTCATGTGTTCTTATAATAGGGTGAATGGGATTCCCACCTGTGCTGACCCAGACCTGCTTCAAGGGGTAGTCAGAGGCCAATGGGGTCTAGATGGATATATAGTTTCTGACTGTGATTCGGTGGAAGTTTACTACGATGCAATCCATTATACTCAAACACCTGAAGATGCAGTAGCCCTGGCCTTGAAAGCAGGTCTAAACATGAACTGTGGGGATTATCTAGGGAAGTACACAGAGAATGCAGTCAACTTGAAGAAAGTGGAAGAATCTGTTGTTGATCAGTCCTTGATATACAACTACATAGTACTGATGAGGCTTGGCTTCTTTGATGGTGATCCGAAACTGCTTGAATTCGGAAACCTTGGAGTATCGGATGTCTGCAGTGACGAACATAAAGCGTTGGCACTTGATGCTGCTAAGCAGGGCATAGTTTTGCTAGACAACAACGGCGCTCTCCCTTTGTCCCCAACTACAACCAAGAATTTGGCCATTATTGGACCTAATGCAAACGCCACTGAAGTCATGATAAGCAACTATGCTGGAATACCATGTAGCTACACTAGCCCTCTACAAGGGCTAAAAAAGTATGTATCAACCGCGAAATATGAGCCTGGGTGTAGCAGTGTGAAATGTGCTGATGAGAGCCTCATTGAGGCAGCAGCTCAGGCTGTTGCTCTAGCTGATGCAGTGGTGTTAGTAATGGGGCTTGATCAGTCCATTGAAGCAGAAGGGCTAGACAGAGTAAACTTGACTTTACCAGGCTTTCAGGAAAAGCTTGTGGAGCAAGTTGTTGATGCAACAAATGGAACAGTCATTCTGGTCATTATGTCAGCTGGTCCAATTGATGTTTCTTTTGCTAAAAATTTGAGCAAAGTAGGAGGGATTCTATGGGTTGGGTATCCAGGTCAAGATGGAGGAGATGCCATAGCTCAAGTCATATTTGGGGACTATAATCCAGCTGGGAAGAGTCCTTTTACATGGTACCCACAGGAGTATGTAGACCAAGTGCCAATGACAGACATGAACATGAGAGCCAACAGTAGTAGAAACTACCCTGGAAGAACATATAGATTCTACACTGGAAAAACCATTTATGAGTTTGGTCATGGGCTAAGCTATTCAACCTTCTCCAAGTTCATAATGTCTGCACCTTCCACTCTACTCATCCACTCAAATTCAACAACTACTTTCAACTCCCACAATAACATTCAAATATTGGAACCCGTTTCCAGCTCTGCCAAGGAAATTGACATATCAAGCATAAACTGCCAGAGCTTAGCATTTGATCTAGTTGTTGGGGTGACGAACAAAGGGCCAATAGATGGCTCCCATGTGGTGCTCGCTTTCTGGAGACCACCAAGCTCACAAGGGTTGATTGGGGCACCCAACTTGCAGCTTGTGGGTTTTGAAAGAGTGGAGGTGAAAAATAGAGAGACAAAGTCATTGACAATGAGGGTGGATGTATGCAAGGGACTGAACCTTGTGGATAGCGAAGGGAAGAGGAAGTTGGTCACCGGATTGCATACGATTCTCGTTGGCTCTCCTAGTGAGCAACAAGTGAAGCACTACCTCAATGTTAGGCTGCCTGAGCAACATGAACTGAGCTACTCTAGTAGTCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

794

Amino Acids

86.5

Weight (kDa)

5.37

Isoelectric Point (pI)

37.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	106 - 348	9.2e-35	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	396 - 626	4.1e-50	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	697 - 767	2.8e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19620
fragaria_vesca	FvH4_2g04280
malus_domestica	MD05G1099400.v1.1
prunus_persica	Prupe.8G143900_v2.0.a1
pyrus_communis	pycom05g09830
rosa_chinensis	RchiOBHm_Chr6g0253671 RchiOBHm_Chr6g0253691
rosa_laevigata	RLG00000014993
rosa_multiflora	Rmu_sc0000331.1_g000019 Rmu_sc0001351.1_g000008 Rmu_sc0006378.1_g000004 Rmu_sc0017598.1_g000001
rosa_roxburghii	Rroxscaffold_7G00211710
rosa_rugosa	Rorug05G0545400 Rorug05G0545500 Rorug05G0545600 Rorug05G0545700
rosa_samantha	Rh6AG061200 Rh6CG054800 Rh6DG052300
rosa_wichuraiana	Rw6G005440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	774
Acc36I	ACCTGC	2 cut(s)	822, 941
Acc65I	GGTACC	1 cut(s)	1740
AccB1I	GGYRCC	4 cut(s)	310, 317, 1740, 2140
AccB7I	CCANNNNNTGG	1 cut(s)	2081
AccI	GTMKAC	1 cut(s)	1758
AccII	CGCG	1 cut(s)	1358
AciI	CCGC	2 cut(s)	348, 1356
AclI	AACGTT	1 cut(s)	276
AclWI	GGATC	2 cut(s)	147, 1088
AcoI	YGGCCR	2 cut(s)	280, 1245
AcsI	RAATTY	4 cut(s)	1109, 1240, 1621, 1933
AcuI	CTGAAG	2 cut(s)	942, 1296
AfaI	GTAC	4 cut(s)	419, 989, 1065, 1742
AfiI	CCNNNNNNNGG	8 cut(s)	181, 239, 484, 485, 523, 1331, 1411, 2081
AhlI	ACTAGT	1 cut(s)	323
AjnI	CCWGG	6 cut(s)	313, 936, 1369, 1516, 1660, 1813
AjuI	GAANNNNNNNTTGG	4 cut(s)	1591, 1623, 2249, 2281
Alw21I	GWGCWC	2 cut(s)	496, 2100
Alw26I	GTCTC	5 cut(s)	163, 274, 494, 2104, 2186
AlwI	GGATC	2 cut(s)	147, 1088
AlwNI	CAGNNNCTG	1 cut(s)	732
Ama87I	CYCGRG	1 cut(s)	408
AoxI	GGCC	7 cut(s)	280, 556, 745, 835, 939, 1245, 2072
ApeKI	GCWGC	8 cut(s)	350, 612, 615, 1172, 1415, 1418, 2152, 2341
ApoI	RAATTY	4 cut(s)	1109, 1240, 1621, 1933
Asp718I	GGTACC	1 cut(s)	1740
AspLEI	GCGC	1 cut(s)	1211
AspS9I	GGNCC	8 cut(s)	184, 249, 514, 556, 745, 1256, 1595, 2072
AsuC2I	CCSGG	2 cut(s)	436, 507
AsuHPI	GGTGA	8 cut(s)	584, 602, 697, 793, 1103, 2071, 2191, 2263
AvaI	CYCGRG	1 cut(s)	408
AvaII	GGWCC	5 cut(s)	184, 249, 514, 1256, 1595
BaeGI	GKGCMC	1 cut(s)	2143
BalI	TGGCCA	1 cut(s)	1247
BanI	GGYRCC	4 cut(s)	310, 317, 1740, 2140
BbsI	GAAGAC	1 cut(s)	711
Bbv12I	GWGCWC	2 cut(s)	496, 2100
BbvI	GCAGC	8 cut(s)	337, 599, 602, 1159, 1427, 1430, 2164, 2328
BccI	CCATC	6 cut(s)	376, 477, 845, 1082, 1664, 2075
BceAI	ACGGC	1 cut(s)	1222
BciT130I	CCWGG	6 cut(s)	315, 938, 1371, 1518, 1662, 1815
BciVI	GTATCC	1 cut(s)	1668
BclI	TGATCA	2 cut(s)	1036, 1468
BcnI	CCSGG	2 cut(s)	436, 507
BcoDI	GTCTC	5 cut(s)	163, 274, 494, 2104, 2186
BcuI	ACTAGT	1 cut(s)	323
BfmI	CTRYAG	2 cut(s)	333, 1138
BfoI	RGCGCY	1 cut(s)	1212
BfuAI	ACCTGC	2 cut(s)	822, 941
BfuI	GTATCC	1 cut(s)	1668
BisI	GCNGC	8 cut(s)	351, 613, 616, 1173, 1416, 1419, 2153, 2342
BlpI	GCTNAGC	3 cut(s)	1176, 1871, 2035
BlsI	GCNGC	8 cut(s)	352, 614, 617, 1174, 1417, 1420, 2154, 2343
BmcAI	AGTACT	1 cut(s)	1065
Bme1390I	CCNGG	8 cut(s)	315, 436, 507, 938, 1371, 1518, 1662, 1815
Bme18I	GGWCC	5 cut(s)	184, 249, 514, 1256, 1595
BmeT110I	CYCGRG	1 cut(s)	408
BmgT120I	GGNCC	8 cut(s)	184, 249, 514, 556, 745, 1256, 1595, 2072
BmiI	GGNNCC	7 cut(s)	312, 319, 516, 1742, 1980, 2086, 2142
BmrFI	CCNGG	8 cut(s)	315, 436, 507, 938, 1371, 1518, 1662, 1815
BmsI	GCATC	8 cut(s)	31, 667, 886, 916, 1159, 1432, 1543, 1669
BpiI	GAAGAC	1 cut(s)	711
BpmI	CTGGAG	1 cut(s)	2128
Bpu10I	CCTNAGC	3 cut(s)	681, 1422, 2346
Bpu1102I	GCTNAGC	3 cut(s)	1176, 1871, 2035
BpuEI	CTTGAG	2 cut(s)	584, 1674
BpuMI	CCSGG	2 cut(s)	436, 507
BsaBI	GATNNNNATC	1 cut(s)	1092
BsaI	GGTCTC	2 cut(s)	163, 2104
BsaWI	WCCGGW	1 cut(s)	2273
BsaXI	ACNNNNNCTCC	2 cut(s)	27, 57
Bsc4I	CCNNNNNNNGG	8 cut(s)	181, 239, 484, 485, 523, 1331, 1411, 2081
Bse1I	ACTGG	2 cut(s)	592, 1843
Bse3DI	GCAATG	1 cut(s)	586
Bse8I	GATNNNNATC	1 cut(s)	1092
BseBI	CCWGG	6 cut(s)	315, 938, 1371, 1518, 1662, 1815
BseGI	GGATG	4 cut(s)	387, 1138, 1923, 2224
BseJI	GATNNNNATC	1 cut(s)	1092
BseLI	CCNNNNNNNGG	8 cut(s)	181, 239, 484, 485, 523, 1331, 1411, 2081
BseMI	GCAATG	1 cut(s)	586
BseMII	CTCAG	4 cut(s)	695, 1436, 2337, 2351
BseNI	ACTGG	2 cut(s)	592, 1843
BseRI	GAGGAG	1 cut(s)	1689
BseSI	GKGCMC	1 cut(s)	2143
BseXI	GCAGC	8 cut(s)	337, 599, 602, 1159, 1427, 1430, 2164, 2328
BseYI	CCCAGC	1 cut(s)	1718
BsgI	GTGCAG	2 cut(s)	758, 1890
Bsh1236I	CGCG	1 cut(s)	1358
BshFI	GGCC	7 cut(s)	282, 558, 747, 837, 941, 1247, 2074
BshNI	GGYRCC	4 cut(s)	310, 317, 1740, 2140
BsiHKAI	GWGCWC	2 cut(s)	496, 2100
BsiHKCI	CYCGRG	1 cut(s)	408
BsiSI	CCGG	3 cut(s)	435, 506, 2274
BslFI	GGGAC	4 cut(s)	38, 1207, 1718, 2244
BslI	CCNNNNNNNGG	8 cut(s)	181, 239, 484, 485, 523, 1331, 1411, 2081
BsmAI	GTCTC	5 cut(s)	163, 274, 494, 2104, 2186
BsmFI	GGGAC	4 cut(s)	38, 1207, 1718, 2244
BsmI	GAATGC	1 cut(s)	1003
BsnI	GGCC	7 cut(s)	282, 558, 747, 837, 941, 1247, 2074
Bso31I	GGTCTC	2 cut(s)	163, 2104
BsoBI	CYCGRG	1 cut(s)	408
Bsp1286I	GDGCHC	3 cut(s)	496, 2100, 2143
Bsp1407I	TGTACA	1 cut(s)	417
Bsp143I	GATC	5 cut(s)	139, 1036, 1093, 1468, 2044
Bsp1720I	GCTNAGC	3 cut(s)	1176, 1871, 2035
Bsp19I	CCATGG	1 cut(s)	262
BspACI	CCGC	2 cut(s)	348, 1356
BspANI	GGCC	7 cut(s)	282, 558, 747, 837, 941, 1247, 2074
BspCNI	CTCAG	4 cut(s)	694, 1435, 2338, 2352
BspFNI	CGCG	1 cut(s)	1358
BspHI	TCATGA	1 cut(s)	1281
BspLI	GGNNCC	7 cut(s)	312, 319, 516, 1742, 1980, 2086, 2142
BspMAI	CTGCAG	2 cut(s)	337, 1142
BspMI	ACCTGC	2 cut(s)	822, 941
BspPI	GGATC	2 cut(s)	147, 1088
BspT107I	GGYRCC	4 cut(s)	310, 317, 1740, 2140
BspTNI	GGTCTC	2 cut(s)	163, 2104
BsrDI	GCAATG	1 cut(s)	586
BsrGI	TGTACA	1 cut(s)	417
BsrI	ACTGG	2 cut(s)	592, 1843
BssMI	GATC	5 cut(s)	139, 1036, 1093, 1468, 2044
BssT1I	CCWWGG	4 cut(s)	147, 262, 1120, 1998
Bst2UI	CCWGG	6 cut(s)	315, 938, 1371, 1518, 1662, 1815
Bst4CI	ACNGT	5 cut(s)	310, 872, 968, 1570, 1799
Bst6I	CTCTTC	2 cut(s)	1718, 2252
BstAPI	GCANNNNNTGC	2 cut(s)	1169, 2025
BstAUI	TGTACA	1 cut(s)	417
BstC8I	GCNNGC	3 cut(s)	560, 620, 2100
BstDEI	CTNAG	8 cut(s)	520, 681, 1176, 1422, 1871, 2035, 2346, 2360
BstDSI	CCRYGG	2 cut(s)	262, 306
BstEII	GGTNACC	1 cut(s)	2269
BstENI	CCTNNNNNAGG	2 cut(s)	1329, 1409
BstF5I	GGATG	4 cut(s)	387, 1138, 1923, 2224
BstFNI	CGCG	1 cut(s)	1358
BstH2I	RGCGCY	1 cut(s)	1212
BstHHI	GCGC	1 cut(s)	1211
BstKTI	GATC	5 cut(s)	142, 1039, 1096, 1471, 2047
BstMAI	GTCTC	5 cut(s)	163, 274, 494, 2104, 2186
BstMBI	GATC	5 cut(s)	139, 1036, 1093, 1468, 2044
BstNI	CCWGG	6 cut(s)	315, 938, 1371, 1518, 1662, 1815
BstNSI	RCATGY	1 cut(s)	81
BstPI	GGTNACC	1 cut(s)	2269
BstSCI	CCNGG	8 cut(s)	313, 434, 505, 936, 1369, 1516, 1660, 1813
BstSFI	CTRYAG	2 cut(s)	333, 1138
BstSLI	GKGCMC	1 cut(s)	2143
BstUI	CGCG	1 cut(s)	1358
BstV1I	GCAGC	8 cut(s)	337, 599, 602, 1159, 1427, 1430, 2164, 2328
BstV2I	GAAGAC	1 cut(s)	711
BstXI	CCANNNNNNTGG	2 cut(s)	154, 1243
BsuI	GTATCC	1 cut(s)	1668
BsuRI	GGCC	7 cut(s)	282, 558, 747, 837, 941, 1247, 2074
BtgI	CCRYGG	2 cut(s)	262, 306
BtsCI	GGATG	4 cut(s)	387, 1138, 1923, 2224
BtsI	GCAGTG	7 cut(s)	342, 546, 627, 763, 1147, 1387, 1452
BveI	ACCTGC	2 cut(s)	822, 941
Cac8I	GCNNGC	3 cut(s)	560, 620, 2100
CaiI	CAGNNNCTG	1 cut(s)	732
CciI	TCATGA	1 cut(s)	1281
CfoI	GCGC	1 cut(s)	1211
Cfr13I	GGNCC	8 cut(s)	184, 249, 514, 556, 745, 1256, 1595, 2072
Csp6I	GTAC	4 cut(s)	418, 988, 1064, 1741
CspCI	CAANNNNNGTGG	2 cut(s)	2196, 2231
CviQI	GTAC	4 cut(s)	418, 988, 1064, 1741
DdeI	CTNAG	8 cut(s)	520, 681, 1176, 1422, 1871, 2035, 2346, 2360
DpnI	GATC	5 cut(s)	141, 1038, 1095, 1470, 2046
DpnII	GATC	5 cut(s)	139, 1036, 1093, 1468, 2044
EaeI	YGGCCR	2 cut(s)	280, 1245
Eam1104I	CTCTTC	2 cut(s)	1718, 2252
EarI	CTCTTC	2 cut(s)	1718, 2252
Eco130I	CCWWGG	4 cut(s)	147, 262, 1120, 1998
Eco31I	GGTCTC	2 cut(s)	163, 2104
Eco47I	GGWCC	5 cut(s)	184, 249, 514, 1256, 1595
Eco57I	CTGAAG	2 cut(s)	942, 1296
Eco88I	CYCGRG	1 cut(s)	408
Eco91I	GGTNACC	1 cut(s)	2269
EcoNI	CCTNNNNNAGG	2 cut(s)	1329, 1409
EcoO109I	RGGNCCY	2 cut(s)	514, 556
EcoO65I	GGTNACC	1 cut(s)	2269
EcoRI	GAATTC	1 cut(s)	1109
EcoRII	CCWGG	6 cut(s)	313, 936, 1369, 1516, 1660, 1813
EcoT14I	CCWWGG	4 cut(s)	147, 262, 1120, 1998
ErhI	CCWWGG	4 cut(s)	147, 262, 1120, 1998
FaqI	GGGAC	4 cut(s)	38, 1207, 1718, 2244
FbaI	TGATCA	2 cut(s)	1036, 1468
FblI	GTMKAC	1 cut(s)	1758
Fnu4HI	GCNGC	8 cut(s)	351, 613, 616, 1173, 1416, 1419, 2153, 2342
FokI	GGATG	4 cut(s)	394, 1145, 1910, 2231
Fsp4HI	GCNGC	8 cut(s)	351, 613, 616, 1173, 1416, 1419, 2153, 2342
GlaI	GCGC	1 cut(s)	1210
GluI	GCNGC	8 cut(s)	351, 613, 616, 1173, 1416, 1419, 2153, 2342
GsaI	CCCAGC	1 cut(s)	1722
GsuI	CTGGAG	1 cut(s)	2128
HaeII	RGCGCY	1 cut(s)	1212
HaeIII	GGCC	7 cut(s)	282, 558, 747, 837, 941, 1247, 2074
HapII	CCGG	3 cut(s)	435, 506, 2274
HhaI	GCGC	1 cut(s)	1211
Hin6I	GCGC	1 cut(s)	1209
HinP1I	GCGC	1 cut(s)	1209
HincII	GTYRAC	3 cut(s)	399, 441, 1006
HindII	GTYRAC	3 cut(s)	399, 441, 1006
HindIII	AAGCTT	2 cut(s)	90, 1532
HpaII	CCGG	3 cut(s)	435, 506, 2274
HphI	GGTGA	8 cut(s)	584, 602, 697, 793, 1103, 2071, 2191, 2263
Hpy166II	GTNNAC	8 cut(s)	399, 441, 544, 889, 990, 1006, 1504, 1759
Hpy188I	TCNGA	7 cut(s)	253, 728, 833, 868, 1098, 1115, 1132
Hpy188III	TCNNGA	5 cut(s)	848, 1282, 1526, 1667, 2107
Hpy8I	GTNNAC	8 cut(s)	399, 441, 544, 889, 990, 1006, 1504, 1759
HpyAV	CCTTC	5 cut(s)	121, 1481, 1894, 1920, 2246
HpyCH4III	ACNGT	5 cut(s)	310, 872, 968, 1570, 1799
HpyCH4IV	ACGT	2 cut(s)	276, 567
HpyF3I	CTNAG	8 cut(s)	520, 681, 1176, 1422, 1871, 2035, 2346, 2360
HpySE526I	ACGT	2 cut(s)	276, 567
HspAI	GCGC	1 cut(s)	1209
KpnI	GGTACC	1 cut(s)	1744
Ksp22I	TGATCA	2 cut(s)	1036, 1468
Kzo9I	GATC	5 cut(s)	139, 1036, 1093, 1468, 2044
LmnI	GCTCC	3 cut(s)	209, 1540, 2090
Lsp1109I	GCAGC	8 cut(s)	337, 599, 602, 1159, 1427, 1430, 2164, 2328
LweI	GCATC	8 cut(s)	31, 667, 886, 916, 1159, 1432, 1543, 1669
MaeII	ACGT	2 cut(s)	276, 567
MaeIII	GTNAC	7 cut(s)	80, 473, 685, 1142, 2059, 2269, 2375
MalI	GATC	5 cut(s)	141, 1038, 1095, 1470, 2046
MboI	GATC	5 cut(s)	139, 1036, 1093, 1468, 2044
MboII	GAAGA	8 cut(s)	16, 716, 935, 1024, 1034, 1735, 1830, 2269
MfeI	CAATTG	1 cut(s)	1599
MhlI	GDGCHC	3 cut(s)	496, 2100, 2143
MlsI	TGGCCA	1 cut(s)	1247
MluNI	TGGCCA	1 cut(s)	1247
MlyI	GAGTC	3 cut(s)	286, 460, 1735
MmeI	TCCRAC	1 cut(s)	211
Mox20I	TGGCCA	1 cut(s)	1247
MscI	TGGCCA	1 cut(s)	1247
MseI	TTAA	3 cut(s)	300, 360, 377
MslI	CAYNNNNRTG	3 cut(s)	76, 675, 1784
Msp20I	TGGCCA	1 cut(s)	1247
MspA1I	CMGCKG	3 cut(s)	350, 1592, 1718
MspI	CCGG	3 cut(s)	435, 506, 2274
MspR9I	CCNGG	8 cut(s)	315, 436, 507, 938, 1371, 1518, 1662, 1815
MunI	CAATTG	1 cut(s)	1599
Mva1269I	GAATGC	1 cut(s)	1003
MvaI	CCWGG	6 cut(s)	315, 938, 1371, 1518, 1662, 1815
MvnI	CGCG	1 cut(s)	1358
NciI	CCSGG	2 cut(s)	436, 507
NcoI	CCATGG	1 cut(s)	262
NdeII	GATC	5 cut(s)	139, 1036, 1093, 1468, 2044
NlaIV	GGNNCC	7 cut(s)	312, 319, 516, 1742, 1980, 2086, 2142
NmeAIII	GCCGAG	2 cut(s)	199, 308
NmuCI	GTSAC	7 cut(s)	80, 473, 685, 1142, 2059, 2269, 2375
NspI	RCATGY	1 cut(s)	81
PaeR7I	CTCGAG	1 cut(s)	408
PagI	TCATGA	1 cut(s)	1281
PctI	GAATGC	1 cut(s)	1003
PfeI	GAWTC	7 cut(s)	365, 790, 875, 1025, 1642, 1830, 2287
PflFI	GACNNNGTC	2 cut(s)	155, 2197
PflMI	CCANNNNNTGG	1 cut(s)	2081
PkrI	GCNGC	8 cut(s)	352, 614, 617, 1174, 1417, 1420, 2154, 2343
PleI	GAGTC	3 cut(s)	286, 459, 1734
PpsI	GAGTC	3 cut(s)	286, 459, 1734
PpuMI	RGGWCCY	1 cut(s)	514
PsiI	TTATAA	1 cut(s)	774
Psp1406I	AACGTT	1 cut(s)	276
Psp5II	RGGWCCY	1 cut(s)	514
Psp6I	CCWGG	6 cut(s)	313, 936, 1369, 1516, 1660, 1813
PspEI	GGTNACC	1 cut(s)	2269
PspFI	CCCAGC	1 cut(s)	1718
PspGI	CCWGG	6 cut(s)	313, 936, 1369, 1516, 1660, 1813
PspN4I	GGNNCC	7 cut(s)	312, 319, 516, 1742, 1980, 2086, 2142
PspPI	GGNCC	8 cut(s)	184, 249, 514, 556, 745, 1256, 1595, 2072
PspPPI	RGGWCCY	1 cut(s)	514
PspXI	VCTCGAGB	1 cut(s)	408
PstI	CTGCAG	2 cut(s)	337, 1142
PstNI	CAGNNNCTG	1 cut(s)	732
PsyI	GACNNNGTC	2 cut(s)	155, 2197
PvuII	CAGCTG	2 cut(s)	1592, 1718
RsaI	GTAC	4 cut(s)	419, 989, 1065, 1742
RsaNI	GTAC	4 cut(s)	418, 988, 1064, 1741
RseI	CAYNNNNRTG	3 cut(s)	76, 675, 1784
SaqAI	TTAA	3 cut(s)	300, 360, 377
SatI	GCNGC	8 cut(s)	351, 613, 616, 1173, 1416, 1419, 2153, 2342
Sau3AI	GATC	5 cut(s)	139, 1036, 1093, 1468, 2044
Sau96I	GGNCC	8 cut(s)	184, 249, 514, 556, 745, 1256, 1595, 2072
ScaI	AGTACT	1 cut(s)	1065
SchI	GAGTC	3 cut(s)	286, 460, 1735
ScrFI	CCNGG	8 cut(s)	315, 436, 507, 938, 1371, 1518, 1662, 1815
SduI	GDGCHC	3 cut(s)	496, 2100, 2143
SfaNI	GCATC	8 cut(s)	31, 667, 886, 916, 1159, 1432, 1543, 1669
SfcI	CTRYAG	2 cut(s)	333, 1138
Sfr274I	CTCGAG	1 cut(s)	408
SinI	GGWCC	5 cut(s)	184, 249, 514, 1256, 1595
SlaI	CTCGAG	1 cut(s)	408
SmiMI	CAYNNNNRTG	3 cut(s)	76, 675, 1784
SmlI	CTYRAG	3 cut(s)	408, 599, 1689
SmoI	CTYRAG	3 cut(s)	408, 599, 1689
SpeI	ACTAGT	1 cut(s)	323
SsiI	CCGC	2 cut(s)	348, 1356
SspI	AATATT	1 cut(s)	1974
StyD4I	CCNGG	8 cut(s)	313, 434, 505, 936, 1369, 1516, 1660, 1813
StyI	CCWWGG	4 cut(s)	147, 262, 1120, 1998
TaaI	ACNGT	5 cut(s)	310, 872, 968, 1570, 1799
TaiI	ACGT	2 cut(s)	279, 570
TaqI	TCGA	3 cut(s)	142, 409, 490
TatI	WGTACW	3 cut(s)	417, 987, 1063
TfiI	GAWTC	7 cut(s)	365, 790, 875, 1025, 1642, 1830, 2287
Tru1I	TTAA	3 cut(s)	300, 360, 377
Tru9I	TTAA	3 cut(s)	300, 360, 377
TseFI	GTSAC	7 cut(s)	80, 473, 685, 1142, 2059, 2269, 2375
TseI	GCWGC	8 cut(s)	350, 612, 615, 1172, 1415, 1418, 2152, 2341
Tsp45I	GTSAC	7 cut(s)	80, 473, 685, 1142, 2059, 2269, 2375
TspDTI	ATGAA	6 cut(s)	17, 378, 977, 1796, 1885, 2370
TspGWI	ACGGA	1 cut(s)	461
Tth111I	GACNNNGTC	2 cut(s)	155, 2197
Van91I	CCANNNNNTGG	1 cut(s)	2081
VpaK11BI	GGWCC	5 cut(s)	184, 249, 514, 1256, 1595
XagI	CCTNNNNNAGG	2 cut(s)	1329, 1409
XapI	RAATTY	4 cut(s)	1109, 1240, 1621, 1933
XbaI	TCTAGA	1 cut(s)	847
XceI	RCATGY	1 cut(s)	81
XcmI	CCANNNNNNNNNTGG	1 cut(s)	421
XhoI	CTCGAG	1 cut(s)	408
XmiI	GTMKAC	1 cut(s)	1758
ZrmI	AGTACT	1 cut(s)	1065

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.