Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0010289

Physical Location & Seq

Genomic Coordinates Reverse (-)

62130795 .. 62137368

Gene Structure 6574 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00211710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGTTTCTCGAAGAGACAAATCTGGTTCAAAGGCCTACGACATAGCCATAAGGGGAAGGGCTCGAGCCATGTACAATTTGGGCCTAGCCGGGTTGACATTTTGGAGTCCTAATGTCAATGTGGTCCGTGACCCGAGATGGGGTCGAACGCAAGAGACACCGGGGGAGGACCCCTTAGTGGTGTCAAATTATGCAGTGAACTATGTCAAGGGTCTCCAAGACGTTGGTGAGGGCAATGCCACTGGTGATAGGCTCAAGGTCTCAAGCTGCTGCAAGCATTACACTGCTTATGATATTGATAATTGGAAAGGTGTTGATAGATTTCACTTTGATGCTCAGGTGACAAAACAGGACATGGAGGATACATTCCAGCCACCATTCAAAAGTTGTGTGCAGGAGGGCCATGTTAGCAGTGTCATGTGTTCATATAATAGGGTGAACGGGATTCCCACCTGTGCTGACCCAGACCTGCTTCAAGGGGTAGTCAGAGGCCAATGGGGTCTAGATGGATATATAGTTTCTGACTGTGATTCTGTGGAAGTTTATTACGATGCAATCCATTATACTGAAACACGTGAGGATGCAGCAGCCCTGGCCTTGAAAGCAGGTCTAAACATGAACTGTGGGGATTATCTAGGGAAGTACACAGAGAATGCAGTCAACTTGAAGAAAGTGAAAGAATCTGTTGTTGATCATGACGAACATAAAGCGTTGGCACTTGACGCTGCTAAGCAGGGCATAGTTTTGCTAGATAACAATGGAGCTCTTCCTTTGTCCCCTACTACGACCAAGAATTTGGCCATTATTGGACCTAATGCAAATGCCACTGAGGCTGCTGCCACAGCTGATGCAGTGGTGTTAGTAGTGGTGGGGCTTGATCAGTCCATTGAAGCAGAAGGTCTAGACAGAGAGAACTTGACTTTACCAGGCTTTCAGGAAAAGCTTGTGGAGCATGTTGTTGATGCAACAAATGGAACAGTCATTCTGGTCATTATGTCAGCTGGTCCAATTGATGTTTCGTTTGCTAAAAATTTGAGCAAAGTAGGAGGGATTCTATGGGTTGGGTATCCAGGTCAAGATGGAGGAGATGCCATAGCTCAAGTCATATTTGGGGATTATAATCCAGCTGGGAAGAGTCCTTTTACATGGTACCCACAGGAGTATGTAGACCAAGTGCCAATGACAGACATGAACATGAGGGCCAACACTAGTAGAAACTACCCTGGAAGAACATATAGGTTCTACACCGGAAAAACCGTCTATGAGTTTGGTCACGGGCTCAGCTATTCAACGTTTTCCAAGTTCATAATCTATGCGCCTTCCACCCTACTCATCCAGCCAAACTCCACTGTTACTTTCACCCCACACAATAACATTCAATTGGAACCCATTTCCGGCACTACCCAAGAAATTGACATATCAGGCATAGATTGCCAGAGCTCAGCATTTGATCTAGTTGTTGGGGTGAGGAACAAAGGGCCAATAGATGGCTCCCACGTGGTGCTTGCTTTCTGGAAACCACCACGCTCACAAGGGTTGATTGGGGCACCAAAGTTGCAGCTTGTGGGTTTTGAAAGAGTGGAGGTGAAGAATAGAGAGACAAAGTCATTGACAATGAGGGTGGATGTGTGCAAGGGACTGAACCTCGTGGATAGTGAAGGGAAGAGGAAGTTAGTCACTGGGCTGCACACGATTCTCGTCGGCTCTCCCAGTGAGCAACAAGTGAAGCACTACCTCAATGTTAGGGTGGCTGAGAAACATGAACTGATCAAAGGCCTCAGCACAAGTTTAGGTCATTTTCCGGGACCGGGGAGCAACTCCAACCGGAGCTACCATCTCCTCACCGGTGGCAATGACTCCTTAGAGGGGTCATCTCACCGCCGGACGCGATCTGAGTTCCCAGCTCCTGCCACTGCTGACTTGTTCGAGCAGCGATCAGAGCTTCAGTTTGCTTATTCACGGAGCTACAAGGAAGAAAGTGGTGTGGTGCTTCTGCAGCTGCGGCTTCCTTGCCCGGAGGATCAAAGAAGGGTTTCTATCCTTACCAAGCAGCCAGCAGGAAGCGACATTTCTTTCTTTGGCGACGAGGCATGCGGCCTTGTCGTCGTCTTCGAGAAGCTGAAGCAGAGACTCCAGACCCTTATTCTTGAACTCGACGCCGCCGACTTGCAGCCGAGTAAAGAGGTCCTGGATAAAGAAGCTGAGATACTCTTTATCCGACCCGGGACTAGGCAGGGTCATCAACGATGGCATTTAACTGGTGGAGCATGCCAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

759

Amino Acids

83.26

Weight (kDa)

5.89

Isoelectric Point (pI)

42.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	20 - 231	3.8e-31	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	274 - 429	7.7e-36	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	499 - 569	6.6e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19620
fragaria_vesca	FvH4_2g04280
malus_domestica	MD05G1099400.v1.1
prunus_persica	Prupe.8G143900_v2.0.a1
pyrus_communis	pycom05g09830
rosa_chinensis	RchiOBHm_Chr6g0253671 RchiOBHm_Chr6g0253691
rosa_laevigata	RLG00000014993
rosa_multiflora	Rmu_sc0000331.1_g000019 Rmu_sc0001351.1_g000008 Rmu_sc0006378.1_g000004 Rmu_sc0017598.1_g000001
rosa_roxburghii	Rroxscaffold_7G00211710
rosa_rugosa	Rorug05G0545400 Rorug05G0545500 Rorug05G0545600 Rorug05G0545700
rosa_samantha	Rh6AG061200 Rh6CG054800 Rh6DG052300
rosa_wichuraiana	Rw6G005440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1119
Acc36I	ACCTGC	2 cut(s)	477, 596
Acc65I	GGTACC	1 cut(s)	1149
AccB1I	GGYRCC	2 cut(s)	1149, 1546
AccB7I	CCANNNNNTGG	1 cut(s)	1487
AccI	GTMKAC	1 cut(s)	1167
AccII	CGCG	1 cut(s)	1888
AciI	CCGC	4 cut(s)	1879, 2002, 2094, 2160
AclI	AACGTT	1 cut(s)	1292
AclWI	GGATC	1 cut(s)	2028
AcoI	YGGCCR	1 cut(s)	798
AcsI	RAATTY	2 cut(s)	793, 1030
AcuI	CTGAAG	2 cut(s)	1928, 2141
AcvI	CACGTG	2 cut(s)	575, 1498
AcyI	GRCGYC	1 cut(s)	2157
AdeI	CACNNNGTG	1 cut(s)	1501
AfaI	GTAC	3 cut(s)	74, 644, 1151
AfiI	CCNNNNNNNGG	8 cut(s)	139, 140, 178, 1394, 1487, 1808, 1866, 2229
AflIII	ACRYGT	1 cut(s)	572
AgeI	ACCGGT	1 cut(s)	1844
AhlI	ACTAGT	1 cut(s)	1208
AjnI	CCWGG	5 cut(s)	591, 925, 1069, 1222, 2187
AjuI	GAANNNNNNNTTGG	2 cut(s)	1000, 1032
Alw21I	GWGCWC	2 cut(s)	766, 1442
Alw26I	GTCTC	6 cut(s)	9, 149, 218, 265, 1592, 2122
AlwI	GGATC	1 cut(s)	2028
AlwNI	CAGNNNCTG	1 cut(s)	1907
Ama87I	CYCGRG	3 cut(s)	63, 133, 2222
ApoI	RAATTY	2 cut(s)	793, 1030
ArsI	GACNNNNNNTTYG	2 cut(s)	778, 810
AsiGI	ACCGGT	1 cut(s)	1844
Asp700I	GAANNNNTTC	1 cut(s)	2032
Asp718I	GGTACC	1 cut(s)	1149
AspLEI	GCGC	1 cut(s)	1318
AsuC2I	CCSGG	7 cut(s)	91, 162, 1803, 1809, 2015, 2223, 2224
AsuHPI	GGTGA	9 cut(s)	239, 257, 352, 448, 1351, 1477, 1597, 1834, 1868
AvaI	CYCGRG	3 cut(s)	63, 133, 2222
AvaII	GGWCC	6 cut(s)	124, 169, 809, 1004, 1805, 2185
BaeGI	GKGCMC	1 cut(s)	1549
BalI	TGGCCA	1 cut(s)	800
BanI	GGYRCC	2 cut(s)	1149, 1546
BanII	GRGCYC	4 cut(s)	64, 766, 1281, 1442
BarI	GAAGNNNNNNTAC	2 cut(s)	2190, 2222
BauI	CACGAG	1 cut(s)	1646
BbrPI	CACGTG	2 cut(s)	575, 1498
BbsI	GAAGAC	1 cut(s)	2101
Bbv12I	GWGCWC	2 cut(s)	766, 1442
BbvCI	CCTCAGC	1 cut(s)	1778
BccI	CCATC	6 cut(s)	132, 500, 1073, 1481, 1842, 2241
BciT130I	CCWGG	5 cut(s)	593, 927, 1071, 1224, 2189
BciVI	GTATCC	2 cut(s)	355, 1077
BclI	TGATCA	3 cut(s)	691, 877, 1767
BcnI	CCSGG	7 cut(s)	91, 162, 1803, 1809, 2015, 2223, 2224
BcoDI	GTCTC	6 cut(s)	9, 149, 218, 265, 1592, 2122
BcuI	ACTAGT	1 cut(s)	1208
BfaI	CTAG	8 cut(s)	86, 503, 635, 749, 902, 1209, 1454, 2229
BfmI	CTRYAG	1 cut(s)	1994
BfuAI	ACCTGC	2 cut(s)	477, 596
BfuI	GTATCC	2 cut(s)	355, 1077
BglI	GCCNNNNNGGC	1 cut(s)	830
BlpI	GCTNAGC	3 cut(s)	729, 1280, 1441
Bme18I	GGWCC	6 cut(s)	124, 169, 809, 1004, 1805, 2185
BmeT110I	CYCGRG	3 cut(s)	63, 133, 2222
BmiI	GGNNCC	6 cut(s)	171, 1151, 1386, 1492, 1548, 1806
BmrI	ACTGGG	2 cut(s)	1689, 1704
BmsI	GCATC	6 cut(s)	322, 541, 571, 838, 952, 1078
BmuI	ACTGGG	2 cut(s)	1689, 1704
BpiI	GAAGAC	1 cut(s)	2101
BpmI	CTGGAG	1 cut(s)	2117
Bpu10I	CCTNAGC	2 cut(s)	336, 1778
Bpu1102I	GCTNAGC	3 cut(s)	729, 1280, 1441
BpuEI	CTTGAG	3 cut(s)	239, 247, 1083
BpuMI	CCSGG	7 cut(s)	91, 162, 1803, 1809, 2015, 2223, 2224
BsaAI	YACGTR	2 cut(s)	575, 1498
BsaBI	GATNNNNATC	1 cut(s)	1119
BsaHI	GRCGYC	1 cut(s)	2157
BsaI	GGTCTC	2 cut(s)	218, 265
BsaJI	CCNNGG	5 cut(s)	161, 591, 1222, 1808, 2222
BsaWI	WCCGGW	3 cut(s)	1247, 1824, 1844
Bsc4I	CCNNNNNNNGG	8 cut(s)	139, 140, 178, 1394, 1487, 1808, 1866, 2229
Bse118I	RCCGGY	1 cut(s)	1844
Bse1I	ACTGG	4 cut(s)	247, 1684, 1710, 2263
Bse3DI	GCAATG	2 cut(s)	241, 1858
Bse8I	GATNNNNATC	1 cut(s)	1119
BseBI	CCWGG	5 cut(s)	593, 927, 1071, 1224, 2189
BseDI	CCNNGG	5 cut(s)	161, 591, 1222, 1808, 2222
BseGI	GGATG	3 cut(s)	586, 1332, 1630
BseJI	GATNNNNATC	1 cut(s)	1119
BseLI	CCNNNNNNNGG	8 cut(s)	139, 140, 178, 1394, 1487, 1808, 1866, 2229
BseMI	GCAATG	2 cut(s)	241, 1858
BseMII	CTCAG	8 cut(s)	350, 819, 1294, 1455, 1743, 1792, 1884, 2193
BseNI	ACTGG	4 cut(s)	247, 1684, 1710, 2263
BseRI	GAGGAG	2 cut(s)	1098, 1829
BseSI	GKGCMC	1 cut(s)	1549
BseYI	CCCAGC	2 cut(s)	1127, 1900
BsgI	GTGCAG	2 cut(s)	413, 1670
Bsh1236I	CGCG	1 cut(s)	1888
BshNI	GGYRCC	2 cut(s)	1149, 1546
BshTI	ACCGGT	1 cut(s)	1844
BsiHKAI	GWGCWC	2 cut(s)	766, 1442
BsiHKCI	CYCGRG	3 cut(s)	63, 133, 2222
BslFI	GGGAC	4 cut(s)	760, 1650, 1818, 2239
BslI	CCNNNNNNNGG	8 cut(s)	139, 140, 178, 1394, 1487, 1808, 1866, 2229
BsmAI	GTCTC	6 cut(s)	9, 149, 218, 265, 1592, 2122
BsmFI	GGGAC	4 cut(s)	760, 1650, 1818, 2239
BsmI	GAATGC	1 cut(s)	658
Bso31I	GGTCTC	2 cut(s)	218, 265
BsoBI	CYCGRG	3 cut(s)	63, 133, 2222
Bsp1286I	GDGCHC	5 cut(s)	64, 766, 1281, 1442, 1549
Bsp1407I	TGTACA	1 cut(s)	72
Bsp143I	GATC	7 cut(s)	691, 877, 1450, 1767, 1889, 1934, 2020
Bsp1720I	GCTNAGC	3 cut(s)	729, 1280, 1441
BspACI	CCGC	4 cut(s)	1879, 2002, 2094, 2160
BspCNI	CTCAG	8 cut(s)	349, 820, 1293, 1454, 1744, 1791, 1885, 2194
BspFNI	CGCG	1 cut(s)	1888
BspHI	TCATGA	1 cut(s)	694
BspLI	GGNNCC	6 cut(s)	171, 1151, 1386, 1492, 1548, 1806
BspMAI	CTGCAG	1 cut(s)	1998
BspMI	ACCTGC	2 cut(s)	477, 596
BspPI	GGATC	1 cut(s)	2028
BspQI	GCTCTTC	1 cut(s)	771
BspT107I	GGYRCC	2 cut(s)	1149, 1546
BspTNI	GGTCTC	2 cut(s)	218, 265
BsrDI	GCAATG	2 cut(s)	241, 1858
BsrFI	RCCGGY	1 cut(s)	1844
BsrGI	TGTACA	1 cut(s)	72
BsrI	ACTGG	4 cut(s)	247, 1684, 1710, 2263
BssAI	RCCGGY	1 cut(s)	1844
BssECI	CCNNGG	5 cut(s)	161, 591, 1222, 1808, 2222
BssMI	GATC	7 cut(s)	691, 877, 1450, 1767, 1889, 1934, 2020
BssNI	GRCGYC	1 cut(s)	2157
BssSI	CACGAG	1 cut(s)	1646
Bst2BI	CACGAG	1 cut(s)	1646
Bst2UI	CCWGG	5 cut(s)	593, 927, 1071, 1224, 2189
Bst4CI	ACNGT	5 cut(s)	527, 623, 979, 1258, 1351
Bst6I	CTCTTC	4 cut(s)	7, 771, 1127, 1658
BstACI	GRCGYC	1 cut(s)	2157
BstAPI	GCANNNNNTGC	1 cut(s)	1431
BstAUI	TGTACA	1 cut(s)	72
BstBAI	YACGTR	2 cut(s)	575, 1498
BstC8I	GCNNGC	5 cut(s)	275, 1506, 2055, 2092, 2269
BstF5I	GGATG	3 cut(s)	586, 1332, 1630
BstFNI	CGCG	1 cut(s)	1888
BstHHI	GCGC	1 cut(s)	1318
BstKTI	GATC	7 cut(s)	694, 880, 1453, 1770, 1892, 1937, 2023
BstMAI	GTCTC	6 cut(s)	9, 149, 218, 265, 1592, 2122
BstMBI	GATC	7 cut(s)	691, 877, 1450, 1767, 1889, 1934, 2020
BstNI	CCWGG	5 cut(s)	593, 927, 1071, 1224, 2189
BstNSI	RCATGY	3 cut(s)	956, 2094, 2271
BstSFI	CTRYAG	1 cut(s)	1994
BstSLI	GKGCMC	1 cut(s)	1549
BstUI	CGCG	1 cut(s)	1888
BstV2I	GAAGAC	1 cut(s)	2101
BstXI	CCANNNNNNTGG	2 cut(s)	224, 796
BsuI	GTATCC	2 cut(s)	355, 1077
BtsCI	GGATG	3 cut(s)	586, 1332, 1630
BtsI	GCAGTG	5 cut(s)	201, 282, 418, 858, 1911
BveI	ACCTGC	2 cut(s)	477, 596
Cac8I	GCNNGC	5 cut(s)	275, 1506, 2055, 2092, 2269
CaiI	CAGNNNCTG	1 cut(s)	1907
CciI	TCATGA	1 cut(s)	694
CfoI	GCGC	1 cut(s)	1318
Cfr10I	RCCGGY	1 cut(s)	1844
Cfr9I	CCCGGG	1 cut(s)	2222
CseI	GACGC	3 cut(s)	731, 1894, 2165
Csp6I	GTAC	3 cut(s)	73, 643, 1150
CspAI	ACCGGT	1 cut(s)	1844
CspCI	CAANNNNNGTGG	2 cut(s)	1602, 1637
CviQI	GTAC	3 cut(s)	73, 643, 1150
DpnI	GATC	7 cut(s)	693, 879, 1452, 1769, 1891, 1936, 2022
DpnII	GATC	7 cut(s)	691, 877, 1450, 1767, 1889, 1934, 2020
DraIII	CACNNNGTG	1 cut(s)	1501
EaeI	YGGCCR	1 cut(s)	798
Eam1104I	CTCTTC	4 cut(s)	7, 771, 1127, 1658
EarI	CTCTTC	4 cut(s)	7, 771, 1127, 1658
Ecl136II	GAGCTC	2 cut(s)	764, 1440
Eco147I	AGGCCT	2 cut(s)	35, 1776
Eco24I	GRGCYC	4 cut(s)	64, 766, 1281, 1442
Eco31I	GGTCTC	2 cut(s)	218, 265
Eco47I	GGWCC	6 cut(s)	124, 169, 809, 1004, 1805, 2185
Eco53kI	GAGCTC	2 cut(s)	764, 1440
Eco57I	CTGAAG	2 cut(s)	1928, 2141
Eco72I	CACGTG	2 cut(s)	575, 1498
Eco88I	CYCGRG	3 cut(s)	63, 133, 2222
EcoICRI	GAGCTC	2 cut(s)	764, 1440
EcoO109I	RGGNCCY	2 cut(s)	169, 2185
EcoRII	CCWGG	5 cut(s)	591, 925, 1069, 1222, 2187
EcoT38I	GRGCYC	4 cut(s)	64, 766, 1281, 1442
FaqI	GGGAC	4 cut(s)	760, 1650, 1818, 2239
FbaI	TGATCA	3 cut(s)	691, 877, 1767
FblI	GTMKAC	1 cut(s)	1167
FokI	GGATG	3 cut(s)	593, 1319, 1637
FriOI	GRGCYC	4 cut(s)	64, 766, 1281, 1442
FspBI	CTAG	8 cut(s)	86, 503, 635, 749, 902, 1209, 1454, 2229
GlaI	GCGC	1 cut(s)	1317
GsaI	CCCAGC	2 cut(s)	1131, 1904
GsuI	CTGGAG	1 cut(s)	2117
HgaI	GACGC	3 cut(s)	731, 1894, 2165
HhaI	GCGC	1 cut(s)	1318
Hin1I	GRCGYC	1 cut(s)	2157
Hin6I	GCGC	1 cut(s)	1316
HinP1I	GCGC	1 cut(s)	1316
HincII	GTYRAC	2 cut(s)	96, 661
HindII	GTYRAC	2 cut(s)	96, 661
HindIII	AAGCTT	1 cut(s)	941
HinfI	GANTC	9 cut(s)	106, 445, 530, 680, 1051, 1135, 1693, 1856, 2130
HphI	GGTGA	9 cut(s)	239, 257, 352, 448, 1351, 1477, 1597, 1834, 1868
Hpy166II	GTNNAC	6 cut(s)	96, 199, 439, 645, 661, 1168
Hpy188I	TCNGA	5 cut(s)	488, 523, 1894, 1939, 2219
Hpy8I	GTNNAC	6 cut(s)	96, 199, 439, 645, 661, 1168
Hpy99I	CGWCG	4 cut(s)	1703, 2087, 2108, 2159
HpyAV	CCTTC	5 cut(s)	51, 890, 1329, 1652, 2022
HpyCH4III	ACNGT	5 cut(s)	527, 623, 979, 1258, 1351
HpyCH4IV	ACGT	4 cut(s)	222, 574, 1292, 1497
HpySE526I	ACGT	4 cut(s)	222, 574, 1292, 1497
Hsp92I	GRCGYC	1 cut(s)	2157
HspAI	GCGC	1 cut(s)	1316
KpnI	GGTACC	1 cut(s)	1153
Ksp22I	TGATCA	3 cut(s)	691, 877, 1767
Kzo9I	GATC	7 cut(s)	691, 877, 1450, 1767, 1889, 1934, 2020
LguI	GCTCTTC	1 cut(s)	771
LmnI	GCTCC	8 cut(s)	761, 949, 1496, 1812, 1827, 1909, 1962, 2264
LweI	GCATC	6 cut(s)	322, 541, 571, 838, 952, 1078
MaeI	CTAG	8 cut(s)	86, 503, 635, 749, 902, 1209, 1454, 2229
MaeII	ACGT	4 cut(s)	222, 574, 1292, 1497
MaeIII	GTNAC	5 cut(s)	128, 340, 1271, 1351, 1675
MalI	GATC	7 cut(s)	693, 879, 1452, 1769, 1891, 1936, 2022
MboI	GATC	7 cut(s)	691, 877, 1450, 1767, 1889, 1934, 2020
MboII	GAAGA	9 cut(s)	24, 679, 758, 1144, 1239, 1600, 1675, 1985, 2101
MfeI	CAATTG	2 cut(s)	1008, 1379
MhlI	GDGCHC	5 cut(s)	64, 766, 1281, 1442, 1549
MlsI	TGGCCA	1 cut(s)	800
MluCI	AATT	8 cut(s)	76, 187, 301, 793, 1008, 1030, 1379, 1410
MluNI	TGGCCA	1 cut(s)	800
MlyI	GAGTC	4 cut(s)	115, 1144, 1850, 2124
MmeI	TCCRAC	2 cut(s)	1845, 2242
Mox20I	TGGCCA	1 cut(s)	800
MroXI	GAANNNNTTC	1 cut(s)	2032
MscI	TGGCCA	1 cut(s)	800
MseI	TTAA	1 cut(s)	2255
MslI	CAYNNNNRTG	2 cut(s)	330, 1193
Msp20I	TGGCCA	1 cut(s)	800
MspA1I	CMGCKG	4 cut(s)	845, 1001, 1127, 1999
MunI	CAATTG	2 cut(s)	1008, 1379
Mva1269I	GAATGC	1 cut(s)	658
MvaI	CCWGG	5 cut(s)	593, 927, 1071, 1224, 2189
MvnI	CGCG	1 cut(s)	1888
NciI	CCSGG	7 cut(s)	91, 162, 1803, 1809, 2015, 2223, 2224
NdeII	GATC	7 cut(s)	691, 877, 1450, 1767, 1889, 1934, 2020
NlaIV	GGNNCC	6 cut(s)	171, 1151, 1386, 1492, 1548, 1806
NmeAIII	GCCGAG	1 cut(s)	2199
NmuCI	GTSAC	4 cut(s)	128, 340, 1271, 1675
NspI	RCATGY	3 cut(s)	956, 2094, 2271
PaeI	GCATGC	2 cut(s)	2094, 2271
PaeR7I	CTCGAG	1 cut(s)	63
PagI	TCATGA	1 cut(s)	694
PceI	AGGCCT	2 cut(s)	35, 1776
PciSI	GCTCTTC	1 cut(s)	771
PcsI	WCGNNNNNNNCGW	2 cut(s)	2109, 2160
PctI	GAATGC	1 cut(s)	658
PdmI	GAANNNNTTC	1 cut(s)	2032
PfeI	GAWTC	5 cut(s)	445, 530, 680, 1051, 1693
PflFI	GACNNNGTC	1 cut(s)	1603
PflMI	CCANNNNNTGG	1 cut(s)	1487
PfoI	TCCNGGA	2 cut(s)	1801, 2187
PinAI	ACCGGT	1 cut(s)	1844
PleI	GAGTC	4 cut(s)	114, 1143, 1850, 2124
PmaCI	CACGTG	2 cut(s)	575, 1498
PmlI	CACGTG	2 cut(s)	575, 1498
PpsI	GAGTC	4 cut(s)	114, 1143, 1850, 2124
Ppu21I	YACGTR	2 cut(s)	575, 1498
PpuMI	RGGWCCY	2 cut(s)	169, 2185
PsiI	TTATAA	1 cut(s)	1119
Psp124BI	GAGCTC	2 cut(s)	766, 1442
Psp1406I	AACGTT	1 cut(s)	1292
Psp5II	RGGWCCY	2 cut(s)	169, 2185
Psp6I	CCWGG	5 cut(s)	591, 925, 1069, 1222, 2187
PspCI	CACGTG	2 cut(s)	575, 1498
PspFI	CCCAGC	2 cut(s)	1127, 1900
PspGI	CCWGG	5 cut(s)	591, 925, 1069, 1222, 2187
PspN4I	GGNNCC	6 cut(s)	171, 1151, 1386, 1492, 1548, 1806
PspPPI	RGGWCCY	2 cut(s)	169, 2185
PspXI	VCTCGAGB	1 cut(s)	63
PstI	CTGCAG	1 cut(s)	1998
PstNI	CAGNNNCTG	1 cut(s)	1907
PsyI	GACNNNGTC	1 cut(s)	1603
PvuII	CAGCTG	4 cut(s)	845, 1001, 1127, 1999
RsaI	GTAC	3 cut(s)	74, 644, 1151
RsaNI	GTAC	3 cut(s)	73, 643, 1150
RseI	CAYNNNNRTG	2 cut(s)	330, 1193
SacI	GAGCTC	2 cut(s)	766, 1442
SapI	GCTCTTC	1 cut(s)	771
SaqAI	TTAA	1 cut(s)	2255
Sau3AI	GATC	7 cut(s)	691, 877, 1450, 1767, 1889, 1934, 2020
SchI	GAGTC	4 cut(s)	115, 1144, 1850, 2124
SduI	GDGCHC	5 cut(s)	64, 766, 1281, 1442, 1549
SfaNI	GCATC	6 cut(s)	322, 541, 571, 838, 952, 1078
SfcI	CTRYAG	1 cut(s)	1994
Sfr274I	CTCGAG	1 cut(s)	63
SgrAI	CRCCGGYG	1 cut(s)	1844
SinI	GGWCC	6 cut(s)	124, 169, 809, 1004, 1805, 2185
SlaI	CTCGAG	1 cut(s)	63
SmaI	CCCGGG	1 cut(s)	2224
SmiMI	CAYNNNNRTG	2 cut(s)	330, 1193
SmlI	CTYRAG	4 cut(s)	63, 254, 262, 1098
SmoI	CTYRAG	4 cut(s)	63, 254, 262, 1098
SpeI	ACTAGT	1 cut(s)	1208
SphI	GCATGC	2 cut(s)	2094, 2271
Sse9I	AATT	8 cut(s)	76, 187, 301, 793, 1008, 1030, 1379, 1410
SseBI	AGGCCT	2 cut(s)	35, 1776
SsiI	CCGC	4 cut(s)	1879, 2002, 2094, 2160
SspMI	CTAG	8 cut(s)	86, 503, 635, 749, 902, 1209, 1454, 2229
SstI	GAGCTC	2 cut(s)	766, 1442
StuI	AGGCCT	2 cut(s)	35, 1776
TaaI	ACNGT	5 cut(s)	527, 623, 979, 1258, 1351
TaiI	ACGT	4 cut(s)	225, 577, 1295, 1500
TaqI	TCGA	6 cut(s)	10, 64, 145, 1926, 2112, 2154
TasI	AATT	8 cut(s)	76, 187, 301, 793, 1008, 1030, 1379, 1410
TatI	WGTACW	2 cut(s)	72, 642
TauI	GCSGC	3 cut(s)	2005, 2097, 2162
TfiI	GAWTC	5 cut(s)	445, 530, 680, 1051, 1693
Tru1I	TTAA	1 cut(s)	2255
Tru9I	TTAA	1 cut(s)	2255
TseFI	GTSAC	4 cut(s)	128, 340, 1271, 1675
Tsp45I	GTSAC	4 cut(s)	128, 340, 1271, 1675
TspDTI	ATGAA	5 cut(s)	414, 632, 1205, 1294, 1776
TspGWI	ACGGA	2 cut(s)	116, 1975
TspMI	CCCGGG	1 cut(s)	2222
Tth111I	GACNNNGTC	1 cut(s)	1603
Van91I	CCANNNNNTGG	1 cut(s)	1487
VpaK11BI	GGWCC	6 cut(s)	124, 169, 809, 1004, 1805, 2185
XapI	RAATTY	2 cut(s)	793, 1030
XbaI	TCTAGA	2 cut(s)	502, 901
XceI	RCATGY	3 cut(s)	956, 2094, 2271
XcmI	CCANNNNNNNNNTGG	1 cut(s)	76
XhoI	CTCGAG	1 cut(s)	63
XmaI	CCCGGG	1 cut(s)	2222
XmiI	GTMKAC	1 cut(s)	1167
XmnI	GAANNNNTTC	1 cut(s)	2032
XspI	CTAG	8 cut(s)	86, 503, 635, 749, 902, 1209, 1454, 2229

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.