Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010289

Physical Location & Seq

Genomic Coordinates Forward (+)

8821652 .. 8824338

Gene Structure 2687 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ22750

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGGGGCAAGTTGTGTCAACCGAGGCTCGAGCCATGTACAATTTGGGTCTAGCGGGGTTGACATTTTGGAGTCCTAATGTCAATGTGGTCCGTGACCCGAGATGGGGTCGAACGCAAGAGACACCGGGGGAGGACCCCTTAGTTGTGTCAAATTATGCAGTGAACTATGTCAAGGGTCTCCAAGACGTTGGTGAGGGCAATGCCACTGGTGATAGGCTCAAGGTCTCAAGCTGCTGCAAGCATTACACTGCTTATGATATTGACAATTGGAAAGGTGTTGATAGATTTCACTTTGATGCTCAGGTGACAAAGCAGGACATGGAGGATACATACCAGCCACCTTTCAAAAGTTGTGAGCAGGAGGGCCATGTTAGCAGTGTCATGTGTTCATATAATAGGGTGAATGGGATTCCCACCTGTGCTGACCCAGACCTGCTGGAAGGGGTAGTCAGAGGCCAATGGGGTCTAGATGGATATATAGTTTCTGACTGTGATTCTGTGGAAGTTTATTACGATGCAATCCATTATTCTGAAACACGTGAGGATGCAGTAGCCCTGGCCTTGAAAGCAGGTCTAAACATGAATTGTGGGGATTATCTAGGGAAGTACACAGAGAATGCAGTCAAGTTGAAGAAAGTGGAAGAATCAGTTGTTGATCTGTCCTTGATATACAACTACATAGTCCTCATGAGGCTTGGCTTCTTTGATGGTGATCCGAAACTGCTGGAATTCGGAAACCTTGGGGTATCGGATGTTTGCAGTGACGAACATAAAGCTTTGGCACTTGACGCTGCTAAGCAGGGCATAGTTTTGCTAGATAACAATGGAGCTCTTCCTTTGTCCCCAACTAGAACCAAGAATTTGGCCATTATTGGACCTAATGCAAATGCCACTACGGTCATGATAAGCAACTATGCTGGAATACCATGTAGCTACACTAGCCCTCTACAAGGGTTACAAAAGTATGTGTCGACAGCAAAATATGAGCCCGGGTGTAGCAATGTAAAATGCGCTGATGAGAGCCTCATCCGGGGAGCGGTTCAGGCTGCTGCCACAGCTAATGCAGTGGTGTTAGTAGTGGGGCTTGATCAGTCCATTGAAGCAGAAGGGCTAGACATAGAGAACTTGACTTTACCAGGCTTTCAGGAAAAGCTTGTGAAGCAAGTTGTTGATGCAACAAATGGAACAGTCATCCTGGTAATTATGTCAGCTGGTCCAATTGATATTTCGTTTGCTAAAAATTTGAGCAAAGTAGGATGGATGCTATGGGTTGGGTATCCAGGTCAAGATGGAGGAGATGCCATAGCTCAAGTCATATTTGGGGACTATAATCCAGCTGGGAAGAGTCCTTTTACATGGTACCCACAGGCGTATGTAGACCAAGTGCCCATGACAGACATGAACATGCGGGCCAACACTAGTAGAAGGTACCCTGGAAGAACATATAGGTTCTACACTGGAAAAACCGTCTATGAGTTTGGTCACGGGCTCAGCTATTCAACCTTTTCCAAGTTCATAATCTCTGCACCTTGCACTCTCCTCATCCAATCAAACTCCACTGCTACTTTCAACCCACATTATAACATTCAATTGGAACCCATTTCCAGCATTACCCAAGAAATTGACATATCAAGCATAAACTGCCAGAGCTTAGCATTTGATCTAGTTGTTGGGGTGAGGAACAAAGGGCCAATAGATGGCTCCCACGTGGTGCTTGCATTCTGGAAACCACCAGAACGGTTGACTGGGGCACCAAAGTTGCAGCTTGTGGGTTTTGAAAGAGTCGAGGTGAAGAATAGAGAGACAAAGTCATTGAGAATGAGGGTGGATGTGTGCAAGGGACTGAACCTTGTGGATAATGAAGGGAAGAGGAAGTTGGTCACCGGGCTGCACACCATTCTCGTCGGCTCTCCTAGTGAGAAACAAGTGAAGCACTACCTCAGTGTTAGGCTGGCTCCAAAACATGAATTGAAGTCACTACTAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

662

Amino Acids

72.59

Weight (kDa)

5.61

Isoelectric Point (pI)

32.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	6 - 218	7.6e-30	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	269 - 499	2.1e-48	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	569 - 638	3.8e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19620
fragaria_vesca	FvH4_2g04280
malus_domestica	MD05G1099400.v1.1
prunus_persica	Prupe.8G143900_v2.0.a1
pyrus_communis	pycom05g09830
rosa_chinensis	RchiOBHm_Chr6g0253671 RchiOBHm_Chr6g0253691
rosa_laevigata	RLG00000014993
rosa_multiflora	Rmu_sc0000331.1_g000019 Rmu_sc0001351.1_g000008 Rmu_sc0006378.1_g000004 Rmu_sc0017598.1_g000001
rosa_roxburghii	Rroxscaffold_7G00211710
rosa_rugosa	Rorug05G0545400 Rorug05G0545500 Rorug05G0545600 Rorug05G0545700
rosa_samantha	Rh6AG061200 Rh6CG054800 Rh6DG052300
rosa_wichuraiana	Rw6G005440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1581
Acc36I	ACCTGC	2 cut(s)	441, 560
Acc65I	GGTACC	2 cut(s)	1359, 1428
AccB1I	GGYRCC	3 cut(s)	1359, 1428, 1750
AccB7I	CCANNNNNTGG	1 cut(s)	1697
AccBSI	CCGCTC	1 cut(s)	1037
AccI	GTMKAC	2 cut(s)	971, 1377
AciI	CCGC	3 cut(s)	53, 1037, 1408
AclWI	GGATC	1 cut(s)	707
AcoI	YGGCCR	1 cut(s)	864
AcsI	RAATTY	3 cut(s)	728, 859, 1240
AcvI	CACGTG	2 cut(s)	539, 1708
AdeI	CACNNNGTG	1 cut(s)	1711
AfaI	GTAC	4 cut(s)	38, 608, 1361, 1430
AfiI	CCNNNNNNNGG	6 cut(s)	103, 104, 950, 1030, 1036, 1697
AflIII	ACRYGT	1 cut(s)	536
AgsI	TTSAA	9 cut(s)	346, 565, 631, 1100, 1500, 1570, 1589, 1778, 1972
AhlI	ACTAGT	1 cut(s)	1418
AjnI	CCWGG	5 cut(s)	555, 1135, 1194, 1279, 1432
AjuI	GAANNNNNNNTTGG	4 cut(s)	1210, 1242, 1859, 1891
Alw21I	GWGCWC	1 cut(s)	832
Alw26I	GTCTC	4 cut(s)	113, 182, 229, 1796
AlwI	GGATC	1 cut(s)	707
Ama87I	CYCGRG	3 cut(s)	27, 97, 989
AoxI	GGCC	6 cut(s)	364, 454, 558, 864, 1410, 1688
ApeKI	GCWGC	7 cut(s)	231, 234, 791, 1046, 1049, 1762, 1888
ApoI	RAATTY	3 cut(s)	728, 859, 1240
Asp718I	GGTACC	2 cut(s)	1359, 1428
AspLEI	GCGC	1 cut(s)	1013
AspS9I	GGNCC	7 cut(s)	88, 133, 364, 875, 1214, 1410, 1688
AsuC2I	CCSGG	5 cut(s)	126, 990, 991, 1031, 1885
AsuHPI	GGTGA	8 cut(s)	203, 221, 316, 412, 722, 1687, 1801, 1873
AvaI	CYCGRG	3 cut(s)	27, 97, 989
AvaII	GGWCC	4 cut(s)	88, 133, 875, 1214
BaeGI	GKGCMC	2 cut(s)	1389, 1753
BalI	TGGCCA	1 cut(s)	866
BanI	GGYRCC	3 cut(s)	1359, 1428, 1750
BanII	GRGCYC	3 cut(s)	832, 990, 1491
BbrPI	CACGTG	2 cut(s)	539, 1708
Bbv12I	GWGCWC	1 cut(s)	832
BbvI	GCAGC	7 cut(s)	218, 221, 778, 1033, 1036, 1774, 1875
BccI	CCATC	6 cut(s)	96, 464, 701, 1251, 1283, 1691
BciT130I	CCWGG	5 cut(s)	557, 1137, 1196, 1281, 1434
BciVI	GTATCC	2 cut(s)	319, 1287
BclI	TGATCA	1 cut(s)	1087
BcnI	CCSGG	5 cut(s)	126, 990, 991, 1031, 1885
BcoDI	GTCTC	4 cut(s)	113, 182, 229, 1796
BcuI	ACTAGT	1 cut(s)	1418
BfuAI	ACCTGC	2 cut(s)	441, 560
BfuI	GTATCC	2 cut(s)	319, 1287
BisI	GCNGC	7 cut(s)	232, 235, 792, 1047, 1050, 1763, 1889
BlpI	GCTNAGC	3 cut(s)	795, 1490, 1651
BlsI	GCNGC	7 cut(s)	233, 236, 793, 1048, 1051, 1764, 1890
Bme18I	GGWCC	4 cut(s)	88, 133, 875, 1214
BmeT110I	CYCGRG	3 cut(s)	27, 97, 989
BmgT120I	GGNCC	7 cut(s)	88, 133, 364, 875, 1214, 1410, 1688
BmiI	GGNNCC	7 cut(s)	135, 1361, 1430, 1596, 1702, 1752, 1956
BmrI	ACTGGG	1 cut(s)	1755
BmsI	GCATC	6 cut(s)	286, 505, 535, 1162, 1251, 1288
BmuI	ACTGGG	1 cut(s)	1755
Bpu10I	CCTNAGC	1 cut(s)	300
Bpu1102I	GCTNAGC	3 cut(s)	795, 1490, 1651
BpuEI	CTTGAG	3 cut(s)	203, 211, 1293
BpuMI	CCSGG	5 cut(s)	126, 990, 991, 1031, 1885
BsaAI	YACGTR	2 cut(s)	539, 1708
BsaBI	GATNNNNATC	1 cut(s)	711
BsaI	GGTCTC	2 cut(s)	182, 229
BsaJI	CCNNGG	7 cut(s)	21, 125, 555, 739, 989, 1030, 1432
Bsc4I	CCNNNNNNNGG	6 cut(s)	103, 104, 950, 1030, 1036, 1697
Bse1I	ACTGG	3 cut(s)	211, 1462, 1750
Bse3DI	GCAATG	2 cut(s)	205, 1006
Bse8I	GATNNNNATC	1 cut(s)	711
BseBI	CCWGG	5 cut(s)	557, 1137, 1196, 1281, 1434
BseDI	CCNNGG	7 cut(s)	21, 125, 555, 739, 989, 1030, 1432
BseGI	GGATG	8 cut(s)	550, 757, 1026, 1191, 1262, 1266, 1542, 1834
BseJI	GATNNNNATC	1 cut(s)	711
BseLI	CCNNNNNNNGG	6 cut(s)	103, 104, 950, 1030, 1036, 1697
BseMI	GCAATG	2 cut(s)	205, 1006
BseMII	CTCAG	3 cut(s)	314, 1504, 1954
BseNI	ACTGG	3 cut(s)	211, 1462, 1750
BseRI	GAGGAG	2 cut(s)	1308, 1529
BseSI	GKGCMC	2 cut(s)	1389, 1753
BseXI	GCAGC	7 cut(s)	218, 221, 778, 1033, 1036, 1774, 1875
BseYI	CCCAGC	1 cut(s)	1337
BsgI	GTGCAG	2 cut(s)	1509, 1874
BshFI	GGCC	6 cut(s)	366, 456, 560, 866, 1412, 1690
BshNI	GGYRCC	3 cut(s)	1359, 1428, 1750
BsiHKAI	GWGCWC	1 cut(s)	832
BsiHKCI	CYCGRG	3 cut(s)	27, 97, 989
BsiSI	CCGG	4 cut(s)	125, 990, 1030, 1884
BslFI	GGGAC	3 cut(s)	826, 1337, 1854
BslI	CCNNNNNNNGG	6 cut(s)	103, 104, 950, 1030, 1036, 1697
BsmAI	GTCTC	4 cut(s)	113, 182, 229, 1796
BsmFI	GGGAC	3 cut(s)	826, 1337, 1854
BsmI	GAATGC	2 cut(s)	622, 1718
BsnI	GGCC	6 cut(s)	366, 456, 560, 866, 1412, 1690
Bso31I	GGTCTC	2 cut(s)	182, 229
BsoBI	CYCGRG	3 cut(s)	27, 97, 989
Bsp1286I	GDGCHC	5 cut(s)	832, 990, 1389, 1491, 1753
Bsp1407I	TGTACA	1 cut(s)	36
Bsp143I	GATC	4 cut(s)	655, 712, 1087, 1660
Bsp1720I	GCTNAGC	3 cut(s)	795, 1490, 1651
BspACI	CCGC	3 cut(s)	53, 1037, 1408
BspANI	GGCC	6 cut(s)	366, 456, 560, 866, 1412, 1690
BspCNI	CTCAG	3 cut(s)	313, 1503, 1953
BspHI	TCATGA	2 cut(s)	687, 900
BspLI	GGNNCC	7 cut(s)	135, 1361, 1430, 1596, 1702, 1752, 1956
BspMI	ACCTGC	2 cut(s)	441, 560
BspPI	GGATC	1 cut(s)	707
BspQI	GCTCTTC	1 cut(s)	837
BspT107I	GGYRCC	3 cut(s)	1359, 1428, 1750
BspTNI	GGTCTC	2 cut(s)	182, 229
BsrBI	CCGCTC	1 cut(s)	1037
BsrDI	GCAATG	2 cut(s)	205, 1006
BsrGI	TGTACA	1 cut(s)	36
BsrI	ACTGG	3 cut(s)	211, 1462, 1750
BssECI	CCNNGG	7 cut(s)	21, 125, 555, 739, 989, 1030, 1432
BssMI	GATC	4 cut(s)	655, 712, 1087, 1660
BssT1I	CCWWGG	1 cut(s)	739
Bst2UI	CCWGG	5 cut(s)	557, 1137, 1196, 1281, 1434
Bst4CI	ACNGT	5 cut(s)	491, 898, 1189, 1468, 1740
Bst6I	CTCTTC	3 cut(s)	837, 1337, 1862
BstAPI	GCANNNNNTGC	1 cut(s)	1641
BstAUI	TGTACA	1 cut(s)	36
BstBAI	YACGTR	2 cut(s)	539, 1708
BstC8I	GCNNGC	4 cut(s)	239, 1410, 1716, 1953
BstDEI	CTNAG	6 cut(s)	139, 300, 795, 1490, 1651, 1940
BstEII	GGTNACC	1 cut(s)	1879
BstENI	CCTNNNNNAGG	1 cut(s)	948
BstF5I	GGATG	8 cut(s)	550, 757, 1026, 1191, 1262, 1266, 1542, 1834
BstHHI	GCGC	1 cut(s)	1013
BstKTI	GATC	4 cut(s)	658, 715, 1090, 1663
BstMAI	GTCTC	4 cut(s)	113, 182, 229, 1796
BstMBI	GATC	4 cut(s)	655, 712, 1087, 1660
BstMWI	GCNNNNNNNGC	8 cut(s)	372, 566, 788, 939, 1043, 1055, 1159, 1641
BstNI	CCWGG	5 cut(s)	557, 1137, 1196, 1281, 1434
BstNSI	RCATGY	1 cut(s)	1408
BstPI	GGTNACC	1 cut(s)	1879
BstSLI	GKGCMC	2 cut(s)	1389, 1753
BstV1I	GCAGC	7 cut(s)	218, 221, 778, 1033, 1036, 1774, 1875
BstXI	CCANNNNNNTGG	2 cut(s)	188, 862
BsuI	GTATCC	2 cut(s)	319, 1287
BsuRI	GGCC	6 cut(s)	366, 456, 560, 866, 1412, 1690
BtsCI	GGATG	8 cut(s)	550, 757, 1026, 1191, 1262, 1266, 1542, 1834
BtsI	GCAGTG	6 cut(s)	165, 246, 382, 766, 1071, 1557
BtsIMutI	CAGTG	9 cut(s)	165, 204, 246, 382, 766, 1071, 1455, 1557, 1948
BveI	ACCTGC	2 cut(s)	441, 560
Cac8I	GCNNGC	4 cut(s)	239, 1410, 1716, 1953
CciI	TCATGA	2 cut(s)	687, 900
CfoI	GCGC	1 cut(s)	1013
Cfr13I	GGNCC	7 cut(s)	88, 133, 364, 875, 1214, 1410, 1688
Cfr9I	CCCGGG	1 cut(s)	989
CseI	GACGC	1 cut(s)	797
Csp6I	GTAC	4 cut(s)	37, 607, 1360, 1429
CviQI	GTAC	4 cut(s)	37, 607, 1360, 1429
DdeI	CTNAG	6 cut(s)	139, 300, 795, 1490, 1651, 1940
DpnI	GATC	4 cut(s)	657, 714, 1089, 1662
DpnII	GATC	4 cut(s)	655, 712, 1087, 1660
DraIII	CACNNNGTG	1 cut(s)	1711
EaeI	YGGCCR	1 cut(s)	864
Eam1104I	CTCTTC	3 cut(s)	837, 1337, 1862
EarI	CTCTTC	3 cut(s)	837, 1337, 1862
Ecl136II	GAGCTC	1 cut(s)	830
Eco130I	CCWWGG	1 cut(s)	739
Eco24I	GRGCYC	3 cut(s)	832, 990, 1491
Eco31I	GGTCTC	2 cut(s)	182, 229
Eco47I	GGWCC	4 cut(s)	88, 133, 875, 1214
Eco53kI	GAGCTC	1 cut(s)	830
Eco72I	CACGTG	2 cut(s)	539, 1708
Eco88I	CYCGRG	3 cut(s)	27, 97, 989
Eco91I	GGTNACC	1 cut(s)	1879
EcoICRI	GAGCTC	1 cut(s)	830
EcoNI	CCTNNNNNAGG	1 cut(s)	948
EcoO109I	RGGNCCY	1 cut(s)	133
EcoO65I	GGTNACC	1 cut(s)	1879
EcoRI	GAATTC	1 cut(s)	728
EcoRII	CCWGG	5 cut(s)	555, 1135, 1194, 1279, 1432
EcoT14I	CCWWGG	1 cut(s)	739
EcoT38I	GRGCYC	3 cut(s)	832, 990, 1491
ErhI	CCWWGG	1 cut(s)	739
FaqI	GGGAC	3 cut(s)	826, 1337, 1854
FauI	CCCGC	2 cut(s)	46, 1401
FbaI	TGATCA	1 cut(s)	1087
FblI	GTMKAC	2 cut(s)	971, 1377
Fnu4HI	GCNGC	7 cut(s)	232, 235, 792, 1047, 1050, 1763, 1889
FokI	GGATG	8 cut(s)	557, 764, 1013, 1178, 1269, 1273, 1529, 1841
FriOI	GRGCYC	3 cut(s)	832, 990, 1491
Fsp4HI	GCNGC	7 cut(s)	232, 235, 792, 1047, 1050, 1763, 1889
GlaI	GCGC	1 cut(s)	1012
GluI	GCNGC	7 cut(s)	232, 235, 792, 1047, 1050, 1763, 1889
GsaI	CCCAGC	1 cut(s)	1341
HaeIII	GGCC	6 cut(s)	366, 456, 560, 866, 1412, 1690
HapII	CCGG	4 cut(s)	125, 990, 1030, 1884
HgaI	GACGC	1 cut(s)	797
HhaI	GCGC	1 cut(s)	1013
Hin6I	GCGC	1 cut(s)	1011
HinP1I	GCGC	1 cut(s)	1011
HincII	GTYRAC	4 cut(s)	18, 60, 972, 1743
HindII	GTYRAC	4 cut(s)	18, 60, 972, 1743
HindIII	AAGCTT	2 cut(s)	774, 1151
HinfI	GANTC	6 cut(s)	70, 409, 494, 644, 1345, 1782
HpaII	CCGG	4 cut(s)	125, 990, 1030, 1884
HphI	GGTGA	8 cut(s)	203, 221, 316, 412, 722, 1687, 1801, 1873
Hpy166II	GTNNAC	7 cut(s)	18, 60, 163, 609, 972, 1378, 1743
Hpy188I	TCNGA	6 cut(s)	452, 487, 532, 717, 734, 751
Hpy188III	TCNNGA	6 cut(s)	467, 688, 901, 1145, 1286, 1723
Hpy8I	GTNNAC	7 cut(s)	18, 60, 163, 609, 972, 1378, 1743
Hpy99I	CGWCG	1 cut(s)	1907
HpyAV	CCTTC	4 cut(s)	434, 1100, 1419, 1856
HpyCH4III	ACNGT	5 cut(s)	491, 898, 1189, 1468, 1740
HpyCH4IV	ACGT	3 cut(s)	186, 538, 1707
HpyF10VI	GCNNNNNNNGC	8 cut(s)	372, 566, 788, 939, 1043, 1055, 1159, 1641
HpyF3I	CTNAG	6 cut(s)	139, 300, 795, 1490, 1651, 1940
HpySE526I	ACGT	3 cut(s)	186, 538, 1707
HspAI	GCGC	1 cut(s)	1011
KpnI	GGTACC	2 cut(s)	1363, 1432
Ksp22I	TGATCA	1 cut(s)	1087
Kzo9I	GATC	4 cut(s)	655, 712, 1087, 1660
LguI	GCTCTTC	1 cut(s)	837
LmnI	GCTCC	4 cut(s)	827, 1034, 1706, 1960
Lsp1109I	GCAGC	7 cut(s)	218, 221, 778, 1033, 1036, 1774, 1875
LweI	GCATC	6 cut(s)	286, 505, 535, 1162, 1251, 1288
MaeII	ACGT	3 cut(s)	186, 538, 1707
MaeIII	GTNAC	7 cut(s)	92, 304, 761, 954, 1481, 1879, 1974
MalI	GATC	4 cut(s)	657, 714, 1089, 1662
MbiI	CCGCTC	1 cut(s)	1037
MboI	GATC	4 cut(s)	655, 712, 1087, 1660
MboII	GAAGA	7 cut(s)	643, 653, 824, 1354, 1449, 1804, 1879
MfeI	CAATTG	3 cut(s)	265, 1218, 1589
MhlI	GDGCHC	5 cut(s)	832, 990, 1389, 1491, 1753
MlsI	TGGCCA	1 cut(s)	866
MluNI	TGGCCA	1 cut(s)	866
MlyI	GAGTC	3 cut(s)	79, 1354, 1791
Mox20I	TGGCCA	1 cut(s)	866
MscI	TGGCCA	1 cut(s)	866
MslI	CAYNNNNRTG	2 cut(s)	294, 1403
Msp20I	TGGCCA	1 cut(s)	866
MspA1I	CMGCKG	2 cut(s)	1211, 1337
MspI	CCGG	4 cut(s)	125, 990, 1030, 1884
MunI	CAATTG	3 cut(s)	265, 1218, 1589
Mva1269I	GAATGC	2 cut(s)	622, 1718
MvaI	CCWGG	5 cut(s)	557, 1137, 1196, 1281, 1434
MwoI	GCNNNNNNNGC	8 cut(s)	372, 566, 788, 939, 1043, 1055, 1159, 1641
NciI	CCSGG	5 cut(s)	126, 990, 991, 1031, 1885
NdeII	GATC	4 cut(s)	655, 712, 1087, 1660
NlaIV	GGNNCC	7 cut(s)	135, 1361, 1430, 1596, 1702, 1752, 1956
NmuCI	GTSAC	6 cut(s)	92, 304, 761, 1481, 1879, 1974
NspI	RCATGY	1 cut(s)	1408
PaeR7I	CTCGAG	1 cut(s)	27
PagI	TCATGA	2 cut(s)	687, 900
PciSI	GCTCTTC	1 cut(s)	837
PctI	GAATGC	2 cut(s)	622, 1718
PfeI	GAWTC	3 cut(s)	409, 494, 644
PflFI	GACNNNGTC	1 cut(s)	1807
PflMI	CCANNNNNTGG	1 cut(s)	1697
PkrI	GCNGC	7 cut(s)	233, 236, 793, 1048, 1051, 1764, 1890
PleI	GAGTC	3 cut(s)	78, 1353, 1790
PmaCI	CACGTG	2 cut(s)	539, 1708
PmlI	CACGTG	2 cut(s)	539, 1708
PpsI	GAGTC	3 cut(s)	78, 1353, 1790
Ppu21I	YACGTR	2 cut(s)	539, 1708
PpuMI	RGGWCCY	1 cut(s)	133
PsiI	TTATAA	1 cut(s)	1581
Psp124BI	GAGCTC	1 cut(s)	832
Psp5II	RGGWCCY	1 cut(s)	133
Psp6I	CCWGG	5 cut(s)	555, 1135, 1194, 1279, 1432
PspCI	CACGTG	2 cut(s)	539, 1708
PspEI	GGTNACC	1 cut(s)	1879
PspFI	CCCAGC	1 cut(s)	1337
PspGI	CCWGG	5 cut(s)	555, 1135, 1194, 1279, 1432
PspN4I	GGNNCC	7 cut(s)	135, 1361, 1430, 1596, 1702, 1752, 1956
PspPI	GGNCC	7 cut(s)	88, 133, 364, 875, 1214, 1410, 1688
PspPPI	RGGWCCY	1 cut(s)	133
PspXI	VCTCGAGB	1 cut(s)	27
PsyI	GACNNNGTC	1 cut(s)	1807
PvuII	CAGCTG	2 cut(s)	1211, 1337
RsaI	GTAC	4 cut(s)	38, 608, 1361, 1430
RsaNI	GTAC	4 cut(s)	37, 607, 1360, 1429
RseI	CAYNNNNRTG	2 cut(s)	294, 1403
SacI	GAGCTC	1 cut(s)	832
SalI	GTCGAC	1 cut(s)	970
SapI	GCTCTTC	1 cut(s)	837
SatI	GCNGC	7 cut(s)	232, 235, 792, 1047, 1050, 1763, 1889
Sau3AI	GATC	4 cut(s)	655, 712, 1087, 1660
Sau96I	GGNCC	7 cut(s)	88, 133, 364, 875, 1214, 1410, 1688
SchI	GAGTC	3 cut(s)	79, 1354, 1791
SduI	GDGCHC	5 cut(s)	832, 990, 1389, 1491, 1753
SfaNI	GCATC	6 cut(s)	286, 505, 535, 1162, 1251, 1288
Sfr274I	CTCGAG	1 cut(s)	27
SinI	GGWCC	4 cut(s)	88, 133, 875, 1214
SlaI	CTCGAG	1 cut(s)	27
SmaI	CCCGGG	1 cut(s)	991
SmiMI	CAYNNNNRTG	2 cut(s)	294, 1403
SmlI	CTYRAG	4 cut(s)	27, 218, 226, 1308
SmoI	CTYRAG	4 cut(s)	27, 218, 226, 1308
SpeI	ACTAGT	1 cut(s)	1418
SsiI	CCGC	3 cut(s)	53, 1037, 1408
SstI	GAGCTC	1 cut(s)	832
StyI	CCWWGG	1 cut(s)	739
TaaI	ACNGT	5 cut(s)	491, 898, 1189, 1468, 1740
TaiI	ACGT	3 cut(s)	189, 541, 1710
TaqI	TCGA	4 cut(s)	28, 109, 971, 1785
TatI	WGTACW	2 cut(s)	36, 606
TfiI	GAWTC	3 cut(s)	409, 494, 644
TscAI	CASTG	9 cut(s)	165, 211, 253, 382, 766, 1071, 1462, 1564, 1948
TseFI	GTSAC	6 cut(s)	92, 304, 761, 1481, 1879, 1974
TseI	GCWGC	7 cut(s)	231, 234, 791, 1046, 1049, 1762, 1888
Tsp45I	GTSAC	6 cut(s)	92, 304, 761, 1481, 1879, 1974
TspDTI	ATGAA	6 cut(s)	378, 596, 1415, 1504, 1875, 1980
TspGWI	ACGGA	1 cut(s)	80
TspMI	CCCGGG	1 cut(s)	989
TspRI	CASTG	9 cut(s)	165, 211, 253, 382, 766, 1071, 1462, 1564, 1948
Tth111I	GACNNNGTC	1 cut(s)	1807
Van91I	CCANNNNNTGG	1 cut(s)	1697
VpaK11BI	GGWCC	4 cut(s)	88, 133, 875, 1214
XagI	CCTNNNNNAGG	1 cut(s)	948
XapI	RAATTY	3 cut(s)	728, 859, 1240
XbaI	TCTAGA	1 cut(s)	466
XceI	RCATGY	1 cut(s)	1408
XcmI	CCANNNNNNNNNTGG	1 cut(s)	40
XhoI	CTCGAG	1 cut(s)	27
XmaI	CCCGGG	1 cut(s)	989
XmiI	GTMKAC	2 cut(s)	971, 1377

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.