FvH4_2g05050
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
4096160 .. 4101267
5108 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g05050.t3

Sequence Viewer

Length: 1215 bp
ATGGCCCCTTTCCCGCCGTTGACGGTGGCAGCTTTCCTCATCGCCTTCTTCCTCTCCGAAATCGCGGCCGCGCAATTCGTTCAAAACTCAACCGGAAGTTACAATCTCCACCTTCCAACGCCGTACCAGTCTCTCTGCGCCTCTCTCATTCAGCCTGCCGGTTACCTTTGCTCCGAGCACAAAATTCAGACTAGGGATGGCTACTTTTTGGGTCTTCAACGCGTTTGGGCTCCGAATGCGGATTTGAGAGCTCAGCCGGGTCCGCCGGTGCTGCTTCAGCATGGACTCTTCATGGCAGGTGATGCATGGTTTTTAAATTCTCCTGAACAATCACTGGGCTTCATCCTTGCAGATGAAGGCTTCGATGTCTGGGTAGGAAACGTGCGTGGAACGCGTTGGAGTCAAGGGCACATATCTTTTTCAGAAGAGGATAAGGAATATTGGGATTGGAGTTGGCAGGAATTGGCTCTTTATGATCTTTCAGAGATGATTCATCACATATATTCGCTAACAAACTCCAAGGTTTTTATTGTTGGACATTCACAGGGAACAATCATGTCGTTAGCTGCTTTCACCCAGCCAGATATAGCAGAGATGGTTGAAGCTGCCGCTCTTCTCTGCCCAATATCATACTTGGACCATATCAGCACTCAATTTGTACACAGAATGGTTGACGTGCATCTCGATCAGATGATTCTTGCTATGGGGATCCATCAACTTAACTTTAGAAGTGATTGGGGGATTAACCTTCTAAATTCAATATGTGATGGCCATGTTGACTGCAATGACTTGTTAACCTCCATAACAGGGAAGAATTGTTGCTTCAATAACTCACGTGTGGACTTCTATCTTGACTATGAACCCCACCCATCATCTGCAAAGAACTTTCACCATCTCTTCCAAATGATTCGGAAGGGTACATTTTCAAAGTATGACTATGGCATCTTGAAGAATCTGGTCGAGTACGGTCAGTTGAAACCCCCTCCATTTGATCTTAGTCTCATACCCAAGTCATTGCCACTGTTGATGGCTTATGGAGGCAACGATGCTCTAGCAGATGTGGAAGATTTCCAGCACACCCTCAAGGAATTGCAGTCTACTCCACAGTTGGTTTATCTTGAAAACTATGGTCACGTCGACTTCATTGTCAGCACAACAGCAAAGGAAGATTTTTATGATCAGATGATTTGGTTTTTTAGACGAGGGAGAAGATGA

Protein Analysis

405

Amino Acids

45.89

Weight (kDa)

5.27

Isoelectric Point (pI)

39.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydro_lipase PF04083 47 - 106 2.2e-17 Partial alpha/beta-hydrolase lipase region
Abhydrolase_1 PF00561 88 - 211 7e-10 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 287
AasI GACNNNNNNGTC 1 cut(s) 1145
Acc36I ACCTGC 1 cut(s) 287
AccBSI CCGCTC 1 cut(s) 611
AccI GTMKAC 2 cut(s) 1097, 1137
AccII CGCG 4 cut(s) 65, 71, 222, 394
AciI CCGC 6 cut(s) 14, 65, 69, 239, 263, 609
AclWI GGATC 2 cut(s) 703, 716
AcoI YGGCCR 2 cut(s) 66, 769
AcsI RAATTY 3 cut(s) 183, 316, 754
AcuI CTGAAG 1 cut(s) 260
AcvI CACGTG 1 cut(s) 836
AfaI GTAC 4 cut(s) 125, 660, 919, 965
AfiI CCNNNNNNNGG 1 cut(s) 807
AflIII ACRYGT 3 cut(s) 220, 392, 835
AgsI TTSAA 9 cut(s) 83, 218, 602, 759, 826, 927, 949, 976, 1121
AjiI CACGTC 2 cut(s) 676, 1135
AluBI AGCT 4 cut(s) 32, 251, 566, 605
AluI AGCT 4 cut(s) 32, 251, 566, 605
Alw21I GWGCWC 2 cut(s) 180, 253
Alw26I GTCTC 2 cut(s) 135, 1004
AlwI GGATC 2 cut(s) 703, 716
AoxI GGCC 3 cut(s) 3, 66, 769
ApeKI GCWGC 4 cut(s) 29, 271, 566, 605
ApoI RAATTY 3 cut(s) 183, 316, 754
AspLEI GCGC 2 cut(s) 73, 140
AspS9I GGNCC 3 cut(s) 4, 260, 637
AsuC2I CCSGG 1 cut(s) 258
AsuHPI GGTGA 3 cut(s) 311, 565, 881
AvaII GGWCC 2 cut(s) 260, 637
BaeGI GKGCMC 1 cut(s) 411
BalI TGGCCA 1 cut(s) 771
BamHI GGATCC 1 cut(s) 708
BanII GRGCYC 2 cut(s) 232, 253
BbrPI CACGTG 1 cut(s) 836
BbsI GAAGAC 1 cut(s) 206
Bbv12I GWGCWC 2 cut(s) 180, 253
BbvI GCAGC 4 cut(s) 41, 258, 553, 592
BccI CCATC 7 cut(s) 191, 589, 720, 761, 877, 900, 1021
BceAI ACGGC 1 cut(s) 106
BclI TGATCA 1 cut(s) 1177
BcnI CCSGG 1 cut(s) 258
BcoDI GTCTC 2 cut(s) 135, 1004
BfaI CTAG 2 cut(s) 192, 1052
BfuAI ACCTGC 1 cut(s) 287
BisI GCNGC 7 cut(s) 30, 66, 69, 272, 567, 606, 609
BlpI GCTNAGC 1 cut(s) 252
BlsI GCNGC 7 cut(s) 31, 67, 70, 273, 568, 607, 610
Bme1390I CCNGG 1 cut(s) 258
Bme18I GGWCC 2 cut(s) 260, 637
BmgBI CACGTC 2 cut(s) 676, 1135
BmgT120I GGNCC 3 cut(s) 4, 260, 637
BmiI GGNNCC 4 cut(s) 6, 231, 261, 710
BmrFI CCNGG 1 cut(s) 258
BmrI ACTGGG 1 cut(s) 344
BmsI GCATC 4 cut(s) 292, 688, 951, 1036
BmuI ACTGGG 1 cut(s) 344
BpiI GAAGAC 1 cut(s) 206
Bpu1102I GCTNAGC 1 cut(s) 252
BpuEI CTTGAG 1 cut(s) 1067
BpuMI CCSGG 1 cut(s) 258
BsaAI YACGTR 1 cut(s) 836
BsaJI CCNNGG 1 cut(s) 519
BsaWI WCCGGW 1 cut(s) 92
BsaXI ACNNNNNCTCC 2 cut(s) 155, 185
Bsc4I CCNNNNNNNGG 1 cut(s) 807
Bse118I RCCGGY 2 cut(s) 158, 265
Bse1I ACTGG 2 cut(s) 127, 339
Bse3DI GCAATG 2 cut(s) 790, 1013
BseDI CCNNGG 1 cut(s) 519
BseGI GGATG 2 cut(s) 202, 342
BseLI CCNNNNNNNGG 1 cut(s) 807
BseMI GCAATG 2 cut(s) 790, 1013
BseMII CTCAG 1 cut(s) 266
BseNI ACTGG 2 cut(s) 127, 339
BseSI GKGCMC 1 cut(s) 411
BseX3I CGGCCG 1 cut(s) 66
BseXI GCAGC 4 cut(s) 41, 258, 553, 592
BseYI CCCAGC 1 cut(s) 576
Bsh1236I CGCG 4 cut(s) 65, 71, 222, 394
Bsh1285I CGRYCG 1 cut(s) 69
BshFI GGCC 3 cut(s) 5, 68, 771
BsiEI CGRYCG 1 cut(s) 69
BsiHKAI GWGCWC 2 cut(s) 180, 253
BsiSI CCGG 4 cut(s) 93, 159, 257, 266
BslI CCNNNNNNNGG 1 cut(s) 807
BsmAI GTCTC 2 cut(s) 135, 1004
BsmI GAATGC 1 cut(s) 241
BsnI GGCC 3 cut(s) 5, 68, 771
Bsp1286I GDGCHC 4 cut(s) 180, 232, 253, 411
Bsp1407I TGTACA 1 cut(s) 658
Bsp143I GATC 5 cut(s) 475, 685, 708, 991, 1177
Bsp1720I GCTNAGC 1 cut(s) 252
BspACI CCGC 6 cut(s) 14, 65, 69, 239, 263, 609
BspANI GGCC 3 cut(s) 5, 68, 771
BspCNI CTCAG 1 cut(s) 265
BspFNI CGCG 4 cut(s) 65, 71, 222, 394
BspLI GGNNCC 4 cut(s) 6, 231, 261, 710
BspMI ACCTGC 1 cut(s) 287
BspPI GGATC 2 cut(s) 703, 716
BspQI GCTCTTC 1 cut(s) 618
BsrBI CCGCTC 1 cut(s) 611
BsrDI GCAATG 2 cut(s) 790, 1013
BsrFI RCCGGY 2 cut(s) 158, 265
BsrGI TGTACA 1 cut(s) 658
BsrI ACTGG 2 cut(s) 127, 339
BssAI RCCGGY 2 cut(s) 158, 265
BssECI CCNNGG 1 cut(s) 519
BssMI GATC 5 cut(s) 475, 685, 708, 991, 1177
BssT1I CCWWGG 1 cut(s) 519
Bst4CI ACNGT 4 cut(s) 25, 968, 1023, 1107
Bst6I CTCTTC 4 cut(s) 293, 420, 618, 902
BstAPI GCANNNNNTGC 1 cut(s) 302
BstAUI TGTACA 1 cut(s) 658
BstBAI YACGTR 1 cut(s) 836
BstC8I GCNNGC 1 cut(s) 156
BstDEI CTNAG 2 cut(s) 252, 995
BstEII GGTNACC 1 cut(s) 161
BstF5I GGATG 2 cut(s) 202, 342
BstFNI CGCG 4 cut(s) 65, 71, 222, 394
BstHHI GCGC 2 cut(s) 73, 140
BstKTI GATC 5 cut(s) 478, 688, 711, 994, 1180
BstMAI GTCTC 2 cut(s) 135, 1004
BstMBI GATC 5 cut(s) 475, 685, 708, 991, 1177
BstMCI CGRYCG 1 cut(s) 69
BstMWI GCNNNNNNNGC 6 cut(s) 236, 262, 271, 277, 302, 391
BstPI GGTNACC 1 cut(s) 161
BstSCI CCNGG 1 cut(s) 256
BstSLI GKGCMC 1 cut(s) 411
BstUI CGCG 4 cut(s) 65, 71, 222, 394
BstV1I GCAGC 4 cut(s) 41, 258, 553, 592
BstV2I GAAGAC 1 cut(s) 206
BstX2I RGATCY 1 cut(s) 708
BstYI RGATCY 1 cut(s) 708
BstZI CGGCCG 1 cut(s) 66
BsuRI GGCC 3 cut(s) 5, 68, 771
BtgZI GCGATG 1 cut(s) 25
BtrI CACGTC 2 cut(s) 676, 1135
BtsCI GGATG 2 cut(s) 202, 342
BtsIMutI CAGTG 2 cut(s) 332, 1019
BveI ACCTGC 1 cut(s) 287
Cac8I GCNNGC 1 cut(s) 156
CciNI GCGGCCGC 1 cut(s) 66
CfoI GCGC 2 cut(s) 73, 140
Cfr10I RCCGGY 2 cut(s) 158, 265
Cfr13I GGNCC 3 cut(s) 4, 260, 637
Csp6I GTAC 4 cut(s) 124, 659, 918, 964
CviAII CATG 5 cut(s) 281, 292, 306, 556, 773
CviQI GTAC 4 cut(s) 124, 659, 918, 964
DdeI CTNAG 2 cut(s) 252, 995
DpnI GATC 5 cut(s) 477, 687, 710, 993, 1179
DpnII GATC 5 cut(s) 475, 685, 708, 991, 1177
DraI TTTAAA 1 cut(s) 315
DrdI GACNNNNNNGTC 1 cut(s) 1145
DseDI GACNNNNNNGTC 1 cut(s) 1145
EaeI YGGCCR 2 cut(s) 66, 769
EagI CGGCCG 1 cut(s) 66
Eam1104I CTCTTC 4 cut(s) 293, 420, 618, 902
EarI CTCTTC 4 cut(s) 293, 420, 618, 902
EciI GGCGGA 1 cut(s) 252
Ecl136II GAGCTC 1 cut(s) 251
EclXI CGGCCG 1 cut(s) 66
Eco130I CCWWGG 1 cut(s) 519
Eco24I GRGCYC 2 cut(s) 232, 253
Eco47I GGWCC 2 cut(s) 260, 637
Eco52I CGGCCG 1 cut(s) 66
Eco53kI GAGCTC 1 cut(s) 251
Eco57I CTGAAG 1 cut(s) 260
Eco72I CACGTG 1 cut(s) 836
Eco91I GGTNACC 1 cut(s) 161
EcoICRI GAGCTC 1 cut(s) 251
EcoO65I GGTNACC 1 cut(s) 161
EcoT14I CCWWGG 1 cut(s) 519
EcoT22I ATGCAT 1 cut(s) 307
EcoT38I GRGCYC 2 cut(s) 232, 253
ErhI CCWWGG 1 cut(s) 519
FaeI CATG 5 cut(s) 284, 295, 309, 559, 776
FatI CATG 5 cut(s) 280, 291, 305, 555, 772
FauI CCCGC 1 cut(s) 21
FbaI TGATCA 1 cut(s) 1177
FblI GTMKAC 2 cut(s) 1097, 1137
Fnu4HI GCNGC 7 cut(s) 30, 66, 69, 272, 567, 606, 609
FokI GGATG 2 cut(s) 209, 329
FriOI GRGCYC 2 cut(s) 232, 253
Fsp4HI GCNGC 7 cut(s) 30, 66, 69, 272, 567, 606, 609
FspBI CTAG 2 cut(s) 192, 1052
GlaI GCGC 2 cut(s) 72, 139
GluI GCNGC 7 cut(s) 30, 66, 69, 272, 567, 606, 609
GsaI CCCAGC 1 cut(s) 580
HaeIII GGCC 3 cut(s) 5, 68, 771
HapII CCGG 4 cut(s) 93, 159, 257, 266
HhaI GCGC 2 cut(s) 73, 140
Hin1II CATG 5 cut(s) 284, 295, 309, 559, 776
Hin6I GCGC 2 cut(s) 71, 138
HinP1I GCGC 2 cut(s) 71, 138
HincII GTYRAC 5 cut(s) 21, 673, 778, 795, 1138
HindII GTYRAC 5 cut(s) 21, 673, 778, 795, 1138
HinfI GANTC 6 cut(s) 285, 400, 490, 694, 907, 952
HpaI GTTAAC 1 cut(s) 795
HpaII CCGG 4 cut(s) 93, 159, 257, 266
HphI GGTGA 3 cut(s) 311, 565, 881
Hpy166II GTNNAC 8 cut(s) 21, 661, 673, 778, 795, 841, 1098, 1138
Hpy188I TCNGA 9 cut(s) 58, 175, 189, 234, 424, 484, 690, 912, 1182
Hpy188III TCNNGA 5 cut(s) 323, 683, 851, 946, 1118
Hpy8I GTNNAC 8 cut(s) 21, 661, 673, 778, 795, 841, 1098, 1138
Hpy99I CGWCG 1 cut(s) 1139
HpyAV CCTTC 5 cut(s) 55, 122, 350, 758, 907
HpyCH4III ACNGT 4 cut(s) 25, 968, 1023, 1107
HpyCH4IV ACGT 4 cut(s) 381, 675, 835, 1134
HpyCH4V TGCA 6 cut(s) 305, 350, 679, 783, 878, 1093
HpyF10VI GCNNNNNNNGC 6 cut(s) 236, 262, 271, 277, 302, 391
HpyF3I CTNAG 2 cut(s) 252, 995
HpySE526I ACGT 4 cut(s) 381, 675, 835, 1134
Hsp92II CATG 5 cut(s) 284, 295, 309, 559, 776
HspAI GCGC 2 cut(s) 71, 138
Ksp22I TGATCA 1 cut(s) 1177
KspAI GTTAAC 1 cut(s) 795
Kzo9I GATC 5 cut(s) 475, 685, 708, 991, 1177
LguI GCTCTTC 1 cut(s) 618
LmnI GCTCC 2 cut(s) 176, 235
Lsp1109I GCAGC 4 cut(s) 41, 258, 553, 592
LweI GCATC 4 cut(s) 292, 688, 951, 1036
MaeI CTAG 2 cut(s) 192, 1052
MaeII ACGT 4 cut(s) 381, 675, 835, 1134
MaeIII GTNAC 3 cut(s) 98, 161, 1130
MalI GATC 5 cut(s) 477, 687, 710, 993, 1179
MbiI CCGCTC 1 cut(s) 611
MboI GATC 5 cut(s) 475, 685, 708, 991, 1177
MflI RGATCY 1 cut(s) 708
MhlI GDGCHC 4 cut(s) 180, 232, 253, 411
MlsI TGGCCA 1 cut(s) 771
MluCI AATT 8 cut(s) 74, 183, 316, 461, 653, 754, 814, 1088
MluI ACGCGT 2 cut(s) 220, 392
MluNI TGGCCA 1 cut(s) 771
MlyI GAGTC 2 cut(s) 279, 409
MmeI TCCRAC 3 cut(s) 140, 377, 514
MnlI CCTC 9 cut(s) 47, 62, 151, 421, 808, 993, 1031, 1091, 1196
Mox20I TGGCCA 1 cut(s) 771
Mph1103I ATGCAT 1 cut(s) 307
MscI TGGCCA 1 cut(s) 771
MseI TTAA 4 cut(s) 314, 720, 744, 794
Msp20I TGGCCA 1 cut(s) 771
MspI CCGG 4 cut(s) 93, 159, 257, 266
MspR9I CCNGG 1 cut(s) 258
Mva1269I GAATGC 1 cut(s) 241
MvnI CGCG 4 cut(s) 65, 71, 222, 394
MwoI GCNNNNNNNGC 6 cut(s) 236, 262, 271, 277, 302, 391
NciI CCSGG 1 cut(s) 258
NdeII GATC 5 cut(s) 475, 685, 708, 991, 1177
NlaIII CATG 5 cut(s) 284, 295, 309, 559, 776
NlaIV GGNNCC 4 cut(s) 6, 231, 261, 710
NmuCI GTSAC 1 cut(s) 1130
NotI GCGGCCGC 1 cut(s) 66
NsiI ATGCAT 1 cut(s) 307
PaqCI CACCTGC 1 cut(s) 287
PciSI GCTCTTC 1 cut(s) 618
PcsI WCGNNNNNNNCGW 1 cut(s) 681
PctI GAATGC 1 cut(s) 241
PfeI GAWTC 4 cut(s) 490, 694, 907, 952
PkrI GCNGC 7 cut(s) 31, 67, 70, 273, 568, 607, 610
PleI GAGTC 2 cut(s) 279, 408
PmaCI CACGTG 1 cut(s) 836
PmlI CACGTG 1 cut(s) 836
PpsI GAGTC 2 cut(s) 279, 408
Ppu21I YACGTR 1 cut(s) 836
Psp124BI GAGCTC 1 cut(s) 253
PspCI CACGTG 1 cut(s) 836
PspEI GGTNACC 1 cut(s) 161
PspFI CCCAGC 1 cut(s) 576
PspN4I GGNNCC 4 cut(s) 6, 231, 261, 710
PspPI GGNCC 3 cut(s) 4, 260, 637
PsuI RGATCY 1 cut(s) 708
RsaI GTAC 4 cut(s) 125, 660, 919, 965
RsaNI GTAC 4 cut(s) 124, 659, 918, 964
SacI GAGCTC 1 cut(s) 253
SalI GTCGAC 1 cut(s) 1136
SapI GCTCTTC 1 cut(s) 618
SaqAI TTAA 4 cut(s) 314, 720, 744, 794
SatI GCNGC 7 cut(s) 30, 66, 69, 272, 567, 606, 609
Sau3AI GATC 5 cut(s) 475, 685, 708, 991, 1177
Sau96I GGNCC 3 cut(s) 4, 260, 637
SchI GAGTC 2 cut(s) 279, 409
ScrFI CCNGG 1 cut(s) 258
SduI GDGCHC 4 cut(s) 180, 232, 253, 411
SfaNI GCATC 4 cut(s) 292, 688, 951, 1036
SgrAI CRCCGGYG 1 cut(s) 265
SinI GGWCC 2 cut(s) 260, 637
SmlI CTYRAG 1 cut(s) 1082
SmoI CTYRAG 1 cut(s) 1082
Sse9I AATT 8 cut(s) 74, 183, 316, 461, 653, 754, 814, 1088
SsiI CCGC 6 cut(s) 14, 65, 69, 239, 263, 609
SspI AATATT 1 cut(s) 440
SspMI CTAG 2 cut(s) 192, 1052
SstI GAGCTC 1 cut(s) 253
StyD4I CCNGG 1 cut(s) 256
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 4 cut(s) 25, 968, 1023, 1107
TaiI ACGT 4 cut(s) 384, 678, 838, 1137
TaqI TCGA 4 cut(s) 363, 684, 960, 1137
TasI AATT 8 cut(s) 74, 183, 316, 461, 653, 754, 814, 1088
TatI WGTACW 1 cut(s) 658
TauI GCSGC 3 cut(s) 68, 71, 611
TfiI GAWTC 4 cut(s) 490, 694, 907, 952
Tru1I TTAA 4 cut(s) 314, 720, 744, 794
Tru9I TTAA 4 cut(s) 314, 720, 744, 794
TscAI CASTG 2 cut(s) 339, 1026
TseFI GTSAC 1 cut(s) 1130
TseI GCWGC 4 cut(s) 29, 271, 566, 605
Tsp45I GTSAC 1 cut(s) 1130
TspDTI ATGAA 6 cut(s) 280, 331, 369, 482, 873, 1132
TspRI CASTG 2 cut(s) 339, 1026
VpaK11BI GGWCC 2 cut(s) 260, 637
XapI RAATTY 3 cut(s) 183, 316, 754
XmiI GTMKAC 2 cut(s) 1097, 1137
XspI CTAG 2 cut(s) 192, 1052
Zsp2I ATGCAT 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.