Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005091

Physical Location & Seq

Genomic Coordinates Reverse (-)

15632335 .. 15636716

Gene Structure 4382 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G135900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1227 bp

ATGGCGAGGCCGGTGGCAGTGGTGGTGGCAGCTTTCCTGGCCGGTCTCTTGGCCTCTGAAATCGCAGCAGAAATCGCCCAAAACTCGGCCGATTTTTACAATCTCGGCCGTCGTCGTTTGCCGCAGCAATCTCTCTGTTTGGAGCTCATTGAGCCTTCTGGGTACTCTTGCTCCGAGCACAAAATTCAAACGAAAGATGGCTACTTATTGGGTCTTCAACGCGTGTCGTCTCGAAGTGGAGATTTGAGAACCCAGCTGGGTCCTCCGGTGCTGCTTCAGCATGGACTCTTCATGGCAGGCGATGCATGGTTTTTAAATTCTCCAGAAGAATCAATGGGCTTTGTCCTTGCAGATCAAGGTTTTGATGTATGGGTAGGAAATGTGCGTGGAACACGTTGGAGTCATGGACACGTATCTTTATCAGAAGATGATAAGAATTTTTGGGATTGGAGTTGGCAGGAATTGGCTGAATATGATCTGGCAAAAATGATACACCACATATATTCGATAACAAACTCCAAAGTCTTTATTGTTGGACATTCACAGGGAACAATCATGTCTTTAGCTGCTCTCACCCAGCCGGATGTAGCAGAAATGGTTGAAGCTGCCGCTCTTTTCTGTCCAATATCGTACTTGGAACATATCACTGCTAAATTTGTACTTAGAATGGTTAATATGCATCTTGATCAGATGATTCTTGCTATGGGCATCCATGAACTTAACTTTAGAAGTGATTGGGGAGTCAACCTTTTGGATTCAATATGCGATGGCCATGTTGACTGCAATGACTTGCTAACTTCCATAACAGGGAAGAATTGTTGCTTTAATAACTCACGGGTGGACTTCTATCTTAATTATGAACCTCACCCAACATCCACAAAGAACTTGCATCATCTCTTCCAAATGATTCGTAAGGGTACTTTTTCAAAGTACGACTATGGCATCTTAAAAAATTTGAAGCTGTATGGTCAGTTGAAACCCCCTTCATTTGATCTTGGCCTCATACCCAAGTCACTGCCACTGTTGATGGCTTATGGGGGCAATGATGATTTAGCTGATGTGGAAGATTTCCATCACACTCTCAAGGAATTGCAGTCCACTCCAGAGCTAGTTTATCTCGAGAATTATGGTCATATAGACTTCATTGTGAGCATAAATGCCAAAGAAGATCTTCATGACCGCGTGATTGGGTTTTTTAGGTCATGGGGAAAATCTAGTAGTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004806 GO:0005575 GO:0005576 GO:0005615 GO:0016298 GO:0016787 GO:0016788 GO:0044421 GO:0052689

KEGG Pathways

Metabolic & Signaling

ko00100 ko04142 ko04979 map00100 map04142 map04979

Pfam Domains

Protein Families

Abhydro_lipase Hydrolase_4

Protein Analysis

409

Amino Acids

45.86

Weight (kDa)

5.58

Isoelectric Point (pI)

44.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15230
fragaria_vesca	FvH4_2g05050 FvH4_2g05050 FvH4_2g05050 FvH4_2g05050 FvH4_2g05050 FvH4_2g05050 FvH4_2g05050
malus_domestica	MD07G1242000.v1.1 MD10G1098600.v1.1
prunus_persica	Prupe.8G135900_v2.0.a1 Prupe.8G135900_v2.0.a1 Prupe.8G135900_v2.0.a1 Prupe.8G135900_v2.0.a1 Prupe.8G135900_v2.0.a1
pyrus_communis	pycom10g08450
rosa_chinensis	RchiOBHm_Chr6g0254931
rosa_laevigata	RLG00000014877
rosa_multiflora	Rmu_sc0000016.1_g000012 Rmu_sc0005039.1_g000008
rosa_roxburghii	Rroxscaffold_7G00210470
rosa_rugosa	Rorug05G0555300 Rorug05G0555400 Rorug05G0555500
rosa_samantha	Rh6AG072900 Rh6BG065100 Rh6CG064900 Rh6DG061900
rosa_wichuraiana	Rw0G002710 Rw6G006350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	611
AccII	CGCG	2 cut(s)	222, 1182
AciI	CCGC	3 cut(s)	122, 609, 1180
AcoI	YGGCCR	4 cut(s)	39, 87, 106, 769
AcsI	RAATTY	5 cut(s)	183, 316, 436, 653, 952
AcuI	CTGAAG	1 cut(s)	260
AfaI	GTAC	5 cut(s)	164, 632, 660, 919, 932
AfiI	CCNNNNNNNGG	2 cut(s)	85, 807
AflIII	ACRYGT	3 cut(s)	220, 392, 409
AgsI	TTSAA	7 cut(s)	188, 218, 602, 759, 927, 958, 976
AjnI	CCWGG	1 cut(s)	36
AluBI	AGCT	8 cut(s)	32, 145, 256, 566, 605, 961, 1055, 1108
AluI	AGCT	8 cut(s)	32, 145, 256, 566, 605, 961, 1055, 1108
Alw21I	GWGCWC	2 cut(s)	147, 180
Alw26I	GTCTC	2 cut(s)	50, 234
Ama87I	CYCGRG	1 cut(s)	1118
AoxI	GGCC	7 cut(s)	8, 39, 51, 87, 106, 769, 997
ApeKI	GCWGC	6 cut(s)	29, 65, 124, 271, 566, 605
ApoI	RAATTY	5 cut(s)	183, 316, 436, 653, 952
Asp700I	GAANNNNTTC	1 cut(s)	1170
AspS9I	GGNCC	1 cut(s)	260
AsuHPI	GGTGA	2 cut(s)	565, 857
AvaI	CYCGRG	1 cut(s)	1118
AvaII	GGWCC	1 cut(s)	260
BalI	TGGCCA	1 cut(s)	771
BanII	GRGCYC	1 cut(s)	147
BbsI	GAAGAC	1 cut(s)	206
Bbv12I	GWGCWC	2 cut(s)	147, 180
BbvI	GCAGC	6 cut(s)	41, 77, 136, 258, 553, 592
BccI	CCATC	4 cut(s)	191, 761, 1021, 1080
BceAI	ACGGC	1 cut(s)	93
BciT130I	CCWGG	1 cut(s)	38
BclI	TGATCA	1 cut(s)	685
BcoDI	GTCTC	2 cut(s)	50, 234
BfaI	CTAG	2 cut(s)	1109, 1215
BglII	AGATCT	1 cut(s)	1168
BisI	GCNGC	8 cut(s)	30, 66, 122, 125, 272, 567, 606, 609
BlsI	GCNGC	8 cut(s)	31, 67, 123, 126, 273, 568, 607, 610
Bme1390I	CCNGG	1 cut(s)	38
Bme18I	GGWCC	1 cut(s)	260
BmeT110I	CYCGRG	1 cut(s)	1118
BmgT120I	GGNCC	1 cut(s)	260
BmiI	GGNNCC	1 cut(s)	261
BmrFI	CCNGG	1 cut(s)	38
BmsI	GCATC	5 cut(s)	292, 688, 717, 898, 951
BpiI	GAAGAC	1 cut(s)	206
BpmI	CTGGAG	2 cut(s)	306, 1086
BpuEI	CTTGAG	1 cut(s)	1067
BsaAI	YACGTR	1 cut(s)	412
BsaBI	GATNNNNATC	1 cut(s)	1071
BsaI	GGTCTC	1 cut(s)	50
BsaWI	WCCGGW	1 cut(s)	265
BsaXI	ACNNNNNCTCC	2 cut(s)	155, 185
Bsc4I	CCNNNNNNNGG	2 cut(s)	85, 807
Bse118I	RCCGGY	2 cut(s)	10, 41
Bse3DI	GCAATG	2 cut(s)	790, 1048
Bse8I	GATNNNNATC	1 cut(s)	1071
BseBI	CCWGG	1 cut(s)	38
BseGI	GGATG	3 cut(s)	589, 708, 872
BseJI	GATNNNNATC	1 cut(s)	1071
BseLI	CCNNNNNNNGG	2 cut(s)	85, 807
BseMI	GCAATG	2 cut(s)	790, 1048
BseX3I	CGGCCG	2 cut(s)	87, 106
BseXI	GCAGC	6 cut(s)	41, 77, 136, 258, 553, 592
BseYI	CCCAGC	3 cut(s)	252, 256, 576
Bsh1236I	CGCG	2 cut(s)	222, 1182
Bsh1285I	CGRYCG	2 cut(s)	90, 109
BshFI	GGCC	7 cut(s)	10, 41, 53, 89, 108, 771, 999
BsiEI	CGRYCG	2 cut(s)	90, 109
BsiHKAI	GWGCWC	2 cut(s)	147, 180
BsiHKCI	CYCGRG	1 cut(s)	1118
BsiSI	CCGG	4 cut(s)	11, 42, 266, 581
BslI	CCNNNNNNNGG	2 cut(s)	85, 807
BsmAI	GTCTC	2 cut(s)	50, 234
BsmBI	CGTCTC	1 cut(s)	234
BsnI	GGCC	7 cut(s)	10, 41, 53, 89, 108, 771, 999
Bso31I	GGTCTC	1 cut(s)	50
BsoBI	CYCGRG	1 cut(s)	1118
Bsp1286I	GDGCHC	2 cut(s)	147, 180
Bsp143I	GATC	5 cut(s)	352, 475, 685, 991, 1168
BspACI	CCGC	3 cut(s)	122, 609, 1180
BspANI	GGCC	7 cut(s)	10, 41, 53, 89, 108, 771, 999
BspFNI	CGCG	2 cut(s)	222, 1182
BspHI	TCATGA	1 cut(s)	1174
BspLI	GGNNCC	1 cut(s)	261
BspTNI	GGTCTC	1 cut(s)	50
BsrBI	CCGCTC	1 cut(s)	611
BsrDI	GCAATG	2 cut(s)	790, 1048
BsrFI	RCCGGY	2 cut(s)	10, 41
BssAI	RCCGGY	2 cut(s)	10, 41
BssMI	GATC	5 cut(s)	352, 475, 685, 991, 1168
Bst2UI	CCWGG	1 cut(s)	38
Bst4CI	ACNGT	1 cut(s)	1023
Bst6I	CTCTTC	2 cut(s)	293, 902
BstAPI	GCANNNNNTGC	1 cut(s)	302
BstBAI	YACGTR	1 cut(s)	412
BstC8I	GCNNGC	1 cut(s)	298
BstDEI	CTNAG	1 cut(s)	662
BstF5I	GGATG	3 cut(s)	589, 708, 872
BstFNI	CGCG	2 cut(s)	222, 1182
BstKTI	GATC	5 cut(s)	355, 478, 688, 994, 1171
BstMAI	GTCTC	2 cut(s)	50, 234
BstMBI	GATC	5 cut(s)	352, 475, 685, 991, 1168
BstMCI	CGRYCG	2 cut(s)	90, 109
BstMWI	GCNNNNNNNGC	5 cut(s)	38, 74, 151, 277, 302
BstNI	CCWGG	1 cut(s)	38
BstSCI	CCNGG	1 cut(s)	36
BstUI	CGCG	2 cut(s)	222, 1182
BstV1I	GCAGC	6 cut(s)	41, 77, 136, 258, 553, 592
BstV2I	GAAGAC	1 cut(s)	206
BstX2I	RGATCY	1 cut(s)	1168
BstYI	RGATCY	1 cut(s)	1168
BstZI	CGGCCG	2 cut(s)	87, 106
BsuRI	GGCC	7 cut(s)	10, 41, 53, 89, 108, 771, 999
BtgZI	GCGATG	2 cut(s)	315, 780
BtsCI	GGATG	3 cut(s)	589, 708, 872
BtsI	GCAGTG	3 cut(s)	24, 645, 1013
BtsIMutI	CAGTG	4 cut(s)	24, 645, 1013, 1019
Cac8I	GCNNGC	1 cut(s)	298
CciI	TCATGA	1 cut(s)	1174
Cfr10I	RCCGGY	2 cut(s)	10, 41
Cfr13I	GGNCC	1 cut(s)	260
Csp6I	GTAC	5 cut(s)	163, 631, 659, 918, 931
CviAII	CATG	9 cut(s)	281, 292, 306, 404, 556, 713, 773, 1175, 1203
CviQI	GTAC	5 cut(s)	163, 631, 659, 918, 931
DdeI	CTNAG	1 cut(s)	662
DpnI	GATC	5 cut(s)	354, 477, 687, 993, 1170
DpnII	GATC	5 cut(s)	352, 475, 685, 991, 1168
DraI	TTTAAA	1 cut(s)	315
EaeI	YGGCCR	4 cut(s)	39, 87, 106, 769
EagI	CGGCCG	2 cut(s)	87, 106
Eam1104I	CTCTTC	2 cut(s)	293, 902
EarI	CTCTTC	2 cut(s)	293, 902
Ecl136II	GAGCTC	1 cut(s)	145
EclXI	CGGCCG	2 cut(s)	87, 106
Eco24I	GRGCYC	1 cut(s)	147
Eco31I	GGTCTC	1 cut(s)	50
Eco47I	GGWCC	1 cut(s)	260
Eco52I	CGGCCG	2 cut(s)	87, 106
Eco53kI	GAGCTC	1 cut(s)	145
Eco57I	CTGAAG	1 cut(s)	260
Eco88I	CYCGRG	1 cut(s)	1118
EcoICRI	GAGCTC	1 cut(s)	145
EcoO109I	RGGNCCY	1 cut(s)	260
EcoRII	CCWGG	1 cut(s)	36
EcoT22I	ATGCAT	2 cut(s)	307, 681
EcoT38I	GRGCYC	1 cut(s)	147
Esp3I	CGTCTC	1 cut(s)	234
FaeI	CATG	9 cut(s)	284, 295, 309, 407, 559, 716, 776, 1178, 1206
FalI	AAGNNNNNCTT	2 cut(s)	1155, 1187
FatI	CATG	9 cut(s)	280, 291, 305, 403, 555, 712, 772, 1174, 1202
FbaI	TGATCA	1 cut(s)	685
Fnu4HI	GCNGC	8 cut(s)	30, 66, 122, 125, 272, 567, 606, 609
FokI	GGATG	3 cut(s)	596, 695, 859
FriOI	GRGCYC	1 cut(s)	147
Fsp4HI	GCNGC	8 cut(s)	30, 66, 122, 125, 272, 567, 606, 609
FspBI	CTAG	2 cut(s)	1109, 1215
GluI	GCNGC	8 cut(s)	30, 66, 122, 125, 272, 567, 606, 609
GsaI	CCCAGC	3 cut(s)	256, 260, 580
GsuI	CTGGAG	2 cut(s)	306, 1086
HaeIII	GGCC	7 cut(s)	10, 41, 53, 89, 108, 771, 999
HapII	CCGG	4 cut(s)	11, 42, 266, 581
Hin1II	CATG	9 cut(s)	284, 295, 309, 407, 559, 716, 776, 1178, 1206
HincII	GTYRAC	2 cut(s)	745, 778
HindII	GTYRAC	2 cut(s)	745, 778
HinfI	GANTC	7 cut(s)	285, 329, 400, 694, 741, 755, 907
HpaII	CCGG	4 cut(s)	11, 42, 266, 581
HphI	GGTGA	2 cut(s)	565, 857
Hpy166II	GTNNAC	4 cut(s)	745, 778, 841, 1098
Hpy188I	TCNGA	4 cut(s)	58, 175, 424, 690
Hpy188III	TCNNGA	7 cut(s)	231, 323, 683, 1103, 1118, 1120, 1175
Hpy8I	GTNNAC	4 cut(s)	745, 778, 841, 1098
Hpy99I	CGWCG	2 cut(s)	114, 117
HpyAV	CCTTC	2 cut(s)	165, 993
HpyCH4III	ACNGT	1 cut(s)	1023
HpyCH4IV	ACGT	2 cut(s)	394, 411
HpyCH4V	TGCA	6 cut(s)	305, 350, 679, 783, 889, 1093
HpyF10VI	GCNNNNNNNGC	5 cut(s)	38, 74, 151, 277, 302
HpyF3I	CTNAG	1 cut(s)	662
HpySE526I	ACGT	2 cut(s)	394, 411
Hsp92II	CATG	9 cut(s)	284, 295, 309, 407, 559, 716, 776, 1178, 1206
Ksp22I	TGATCA	1 cut(s)	685
Kzo9I	GATC	5 cut(s)	352, 475, 685, 991, 1168
LmnI	GCTCC	2 cut(s)	142, 176
Lsp1109I	GCAGC	6 cut(s)	41, 77, 136, 258, 553, 592
LweI	GCATC	5 cut(s)	292, 688, 717, 898, 951
MaeI	CTAG	2 cut(s)	1109, 1215
MaeII	ACGT	2 cut(s)	394, 411
MaeIII	GTNAC	1 cut(s)	1011
MalI	GATC	5 cut(s)	354, 477, 687, 993, 1170
MbiI	CCGCTC	1 cut(s)	611
MboI	GATC	5 cut(s)	352, 475, 685, 991, 1168
MboII	GAAGA	9 cut(s)	206, 280, 338, 437, 823, 889, 1076, 1163, 1178
MflI	RGATCY	1 cut(s)	1168
MhlI	GDGCHC	2 cut(s)	147, 180
MlsI	TGGCCA	1 cut(s)	771
MluI	ACGCGT	1 cut(s)	220
MluNI	TGGCCA	1 cut(s)	771
MlyI	GAGTC	3 cut(s)	279, 409, 750
MmeI	TCCRAC	2 cut(s)	377, 514
MnlI	CCTC	4 cut(s)	64, 273, 873, 1010
Mox20I	TGGCCA	1 cut(s)	771
Mph1103I	ATGCAT	2 cut(s)	307, 681
MroXI	GAANNNNTTC	1 cut(s)	1170
MscI	TGGCCA	1 cut(s)	771
MseI	TTAA	7 cut(s)	314, 672, 720, 825, 852, 947, 1225
Msp20I	TGGCCA	1 cut(s)	771
MspA1I	CMGCKG	1 cut(s)	256
MspI	CCGG	4 cut(s)	11, 42, 266, 581
MspR9I	CCNGG	1 cut(s)	38
MvaI	CCWGG	1 cut(s)	38
MvnI	CGCG	2 cut(s)	222, 1182
MwoI	GCNNNNNNNGC	5 cut(s)	38, 74, 151, 277, 302
NdeII	GATC	5 cut(s)	352, 475, 685, 991, 1168
NlaIII	CATG	9 cut(s)	284, 295, 309, 407, 559, 716, 776, 1178, 1206
NlaIV	GGNNCC	1 cut(s)	261
NmeAIII	GCCGAG	2 cut(s)	65, 84
NmuCI	GTSAC	1 cut(s)	1011
NsiI	ATGCAT	2 cut(s)	307, 681
PaeR7I	CTCGAG	1 cut(s)	1118
PagI	TCATGA	1 cut(s)	1174
PdmI	GAANNNNTTC	1 cut(s)	1170
PfeI	GAWTC	4 cut(s)	329, 694, 755, 907
PkrI	GCNGC	8 cut(s)	31, 67, 123, 126, 273, 568, 607, 610
PleI	GAGTC	3 cut(s)	279, 408, 749
PpsI	GAGTC	3 cut(s)	279, 408, 749
Ppu21I	YACGTR	1 cut(s)	412
PpuMI	RGGWCCY	1 cut(s)	260
Psp124BI	GAGCTC	1 cut(s)	147
Psp5II	RGGWCCY	1 cut(s)	260
Psp6I	CCWGG	1 cut(s)	36
PspFI	CCCAGC	3 cut(s)	252, 256, 576
PspGI	CCWGG	1 cut(s)	36
PspN4I	GGNNCC	1 cut(s)	261
PspPI	GGNCC	1 cut(s)	260
PspPPI	RGGWCCY	1 cut(s)	260
PsuI	RGATCY	1 cut(s)	1168
PvuII	CAGCTG	1 cut(s)	256
RsaI	GTAC	5 cut(s)	164, 632, 660, 919, 932
RsaNI	GTAC	5 cut(s)	163, 631, 659, 918, 931
SacI	GAGCTC	1 cut(s)	147
SaqAI	TTAA	7 cut(s)	314, 672, 720, 825, 852, 947, 1225
SatI	GCNGC	8 cut(s)	30, 66, 122, 125, 272, 567, 606, 609
Sau3AI	GATC	5 cut(s)	352, 475, 685, 991, 1168
Sau96I	GGNCC	1 cut(s)	260
SchI	GAGTC	3 cut(s)	279, 409, 750
ScrFI	CCNGG	1 cut(s)	38
SduI	GDGCHC	2 cut(s)	147, 180
SfaNI	GCATC	5 cut(s)	292, 688, 717, 898, 951
Sfr274I	CTCGAG	1 cut(s)	1118
SinI	GGWCC	1 cut(s)	260
SlaI	CTCGAG	1 cut(s)	1118
SmlI	CTYRAG	2 cut(s)	1082, 1118
SmoI	CTYRAG	2 cut(s)	1082, 1118
SsiI	CCGC	3 cut(s)	122, 609, 1180
SspMI	CTAG	2 cut(s)	1109, 1215
SstI	GAGCTC	1 cut(s)	147
StyD4I	CCNGG	1 cut(s)	36
TaaI	ACNGT	1 cut(s)	1023
TaiI	ACGT	2 cut(s)	397, 414
TaqI	TCGA	3 cut(s)	232, 506, 1119
TatI	WGTACW	1 cut(s)	658
TauI	GCSGC	2 cut(s)	124, 611
TfiI	GAWTC	4 cut(s)	329, 694, 755, 907
Tru1I	TTAA	7 cut(s)	314, 672, 720, 825, 852, 947, 1225
Tru9I	TTAA	7 cut(s)	314, 672, 720, 825, 852, 947, 1225
TscAI	CASTG	4 cut(s)	24, 652, 1020, 1026
TseFI	GTSAC	1 cut(s)	1011
TseI	GCWGC	6 cut(s)	29, 65, 124, 271, 566, 605
Tsp45I	GTSAC	1 cut(s)	1011
TspDTI	ATGAA	6 cut(s)	280, 729, 873, 975, 1132, 1163
TspRI	CASTG	4 cut(s)	24, 652, 1020, 1026
VpaK11BI	GGWCC	1 cut(s)	260
XapI	RAATTY	5 cut(s)	183, 316, 436, 653, 952
XhoI	CTCGAG	1 cut(s)	1118
XmnI	GAANNNNTTC	1 cut(s)	1170
XspI	CTAG	2 cut(s)	1109, 1215
Zsp2I	ATGCAT	2 cut(s)	307, 681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.