Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005091

Physical Location & Seq

Genomic Coordinates Reverse (-)

31253826 .. 31257264

Gene Structure 3439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1242000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 399 bp

ATGGTTCTAGTAGTTTCAGGTTACATTTATATATTTCTAGCATCTGTATATGTACTGTTTGGGAGACGTTATCGCCAGGGCCAGCCCTGGTCCAGTGCAAGCAGGGCACCTGTCCAGGGCCGAAATTGTTTTGGGAGCACTTCTTCCTTCGCGAATCGGGACAGAGGTGACCTGAGCCTTTCTTCCGGACCAGTGCCTTGCCCTTCGGTCGCAGCTTTGCTTATCAGCCTCTTGACCTCCGAAATTGCTGCAGAAATCATCCAAAACTCGACTGAATTTTACAGAATCTGTCGCTGTCGTTCACCGCTGCAGTCCTCTGTGCGCAGCTCATTGAGCTTTCTGGGTACTCTTGCTCTGAGCACACAATTCAGACGAAAGATGGGTACTTACTGGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004806 GO:0005575 GO:0005576 GO:0005615 GO:0016298 GO:0016787 GO:0016788 GO:0044421 GO:0052689

KEGG Pathways

Metabolic & Signaling

ko00100 ko04142 ko04979 map00100 map04142 map04979

Pfam Domains

Protein Families

Abhydro_lipase Hydrolase_4

Protein Analysis

133

Amino Acids

14.6

Weight (kDa)

10.15

Isoelectric Point (pI)

56.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15230
fragaria_vesca	FvH4_2g05050 FvH4_2g05050 FvH4_2g05050 FvH4_2g05050 FvH4_2g05050 FvH4_2g05050 FvH4_2g05050
malus_domestica	MD07G1242000.v1.1 MD10G1098600.v1.1
prunus_persica	Prupe.8G135900_v2.0.a1 Prupe.8G135900_v2.0.a1 Prupe.8G135900_v2.0.a1 Prupe.8G135900_v2.0.a1 Prupe.8G135900_v2.0.a1
pyrus_communis	pycom10g08450
rosa_chinensis	RchiOBHm_Chr6g0254931
rosa_laevigata	RLG00000014877
rosa_multiflora	Rmu_sc0000016.1_g000012 Rmu_sc0005039.1_g000008
rosa_roxburghii	Rroxscaffold_7G00210470
rosa_rugosa	Rorug05G0555300 Rorug05G0555400 Rorug05G0555500
rosa_samantha	Rh6AG072900 Rh6BG065100 Rh6CG064900 Rh6DG061900
rosa_wichuraiana	Rw0G002710 Rw6G006350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	323
AccB1I	GGYRCC	1 cut(s)	106
AccII	CGCG	1 cut(s)	152
AccIII	TCCGGA	1 cut(s)	185
AciI	CCGC	1 cut(s)	305
AcsI	RAATTY	1 cut(s)	275
AfaI	GTAC	3 cut(s)	54, 346, 385
AfiI	CCNNNNNNNGG	1 cut(s)	116
AjnI	CCWGG	3 cut(s)	75, 86, 114
AluBI	AGCT	3 cut(s)	215, 327, 336
AluI	AGCT	3 cut(s)	215, 327, 336
Alw21I	GWGCWC	2 cut(s)	140, 362
Alw26I	GTCTC	1 cut(s)	58
AlwNI	CAGNNNCTG	1 cut(s)	288
Aor13HI	TCCGGA	1 cut(s)	185
AoxI	GGCC	2 cut(s)	79, 118
ApeKI	GCWGC	4 cut(s)	212, 248, 307, 324
ApoI	RAATTY	1 cut(s)	275
AspLEI	GCGC	1 cut(s)	324
AspS9I	GGNCC	4 cut(s)	79, 90, 118, 188
AsuHPI	GGTGA	2 cut(s)	179, 294
AvaII	GGWCC	2 cut(s)	90, 188
BaeGI	GKGCMC	1 cut(s)	109
BanI	GGYRCC	1 cut(s)	106
Bbv12I	GWGCWC	2 cut(s)	140, 362
BbvI	GCAGC	4 cut(s)	224, 235, 294, 336
BccI	CCATC	1 cut(s)	373
BcgI	CGANNNNNNTGC	2 cut(s)	230, 264
BciT130I	CCWGG	3 cut(s)	77, 88, 116
BcoDI	GTCTC	1 cut(s)	58
BfaI	CTAG	2 cut(s)	8, 38
BfmI	CTRYAG	2 cut(s)	249, 308
BisI	GCNGC	4 cut(s)	213, 249, 308, 325
BlsI	GCNGC	4 cut(s)	214, 250, 309, 326
Bme1390I	CCNGG	3 cut(s)	77, 88, 116
Bme18I	GGWCC	2 cut(s)	90, 188
BmgT120I	GGNCC	4 cut(s)	79, 90, 118, 188
BmiI	GGNNCC	1 cut(s)	108
BmrFI	CCNGG	3 cut(s)	77, 88, 116
BmsI	GCATC	1 cut(s)	50
Bpu10I	CCTNAGC	1 cut(s)	173
BsaJI	CCNNGG	3 cut(s)	76, 86, 115
BsaWI	WCCGGW	1 cut(s)	185
Bsc4I	CCNNNNNNNGG	1 cut(s)	116
Bse1I	ACTGG	3 cut(s)	93, 191, 395
BseAI	TCCGGA	1 cut(s)	185
BseBI	CCWGG	3 cut(s)	77, 88, 116
BseDI	CCNNGG	3 cut(s)	76, 86, 115
BseGI	GGATG	1 cut(s)	258
BseLI	CCNNNNNNNGG	1 cut(s)	116
BseMII	CTCAG	2 cut(s)	164, 347
BseNI	ACTGG	3 cut(s)	93, 191, 395
BseSI	GKGCMC	1 cut(s)	109
BseXI	GCAGC	4 cut(s)	224, 235, 294, 336
Bsh1236I	CGCG	1 cut(s)	152
Bsh1285I	CGRYCG	1 cut(s)	210
BshFI	GGCC	2 cut(s)	81, 120
BshNI	GGYRCC	1 cut(s)	106
BsiEI	CGRYCG	1 cut(s)	210
BsiHKAI	GWGCWC	2 cut(s)	140, 362
BsiSI	CCGG	1 cut(s)	186
BslFI	GGGAC	1 cut(s)	173
BslI	CCNNNNNNNGG	1 cut(s)	116
BsmAI	GTCTC	1 cut(s)	58
BsmBI	CGTCTC	1 cut(s)	58
BsmFI	GGGAC	1 cut(s)	173
BsnI	GGCC	2 cut(s)	81, 120
Bsp1286I	GDGCHC	3 cut(s)	109, 140, 362
Bsp13I	TCCGGA	1 cut(s)	185
Bsp68I	TCGCGA	1 cut(s)	152
BspACI	CCGC	1 cut(s)	305
BspANI	GGCC	2 cut(s)	81, 120
BspCNI	CTCAG	2 cut(s)	165, 348
BspEI	TCCGGA	1 cut(s)	185
BspFNI	CGCG	1 cut(s)	152
BspLI	GGNNCC	1 cut(s)	108
BspMAI	CTGCAG	2 cut(s)	253, 312
BspT107I	GGYRCC	1 cut(s)	106
BsrI	ACTGG	3 cut(s)	93, 191, 395
BssECI	CCNNGG	3 cut(s)	76, 86, 115
Bst2UI	CCWGG	3 cut(s)	77, 88, 116
Bst4CI	ACNGT	1 cut(s)	57
BstC8I	GCNNGC	2 cut(s)	83, 100
BstDEI	CTNAG	2 cut(s)	173, 356
BstEII	GGTNACC	1 cut(s)	167
BstF5I	GGATG	1 cut(s)	258
BstFNI	CGCG	1 cut(s)	152
BstHHI	GCGC	1 cut(s)	324
BstMAI	GTCTC	1 cut(s)	58
BstMCI	CGRYCG	1 cut(s)	210
BstMWI	GCNNNNNNNGC	2 cut(s)	104, 333
BstNI	CCWGG	3 cut(s)	77, 88, 116
BstPI	GGTNACC	1 cut(s)	167
BstSCI	CCNGG	3 cut(s)	75, 86, 114
BstSFI	CTRYAG	2 cut(s)	249, 308
BstSLI	GKGCMC	1 cut(s)	109
BstUI	CGCG	1 cut(s)	152
BstV1I	GCAGC	4 cut(s)	224, 235, 294, 336
BsuRI	GGCC	2 cut(s)	81, 120
BtsCI	GGATG	1 cut(s)	258
BtsIMutI	CAGTG	2 cut(s)	100, 198
BtuMI	TCGCGA	1 cut(s)	152
Cac8I	GCNNGC	2 cut(s)	83, 100
CaiI	CAGNNNCTG	1 cut(s)	288
CfoI	GCGC	1 cut(s)	324
Cfr13I	GGNCC	4 cut(s)	79, 90, 118, 188
Csp6I	GTAC	3 cut(s)	53, 345, 384
CviJI	RGCY	8 cut(s)	81, 85, 120, 177, 215, 228, 327, 336
CviKI_1	RGCY	8 cut(s)	81, 85, 120, 177, 215, 228, 327, 336
CviQI	GTAC	3 cut(s)	53, 345, 384
DdeI	CTNAG	2 cut(s)	173, 356
Eco47I	GGWCC	2 cut(s)	90, 188
Eco91I	GGTNACC	1 cut(s)	167
EcoO65I	GGTNACC	1 cut(s)	167
EcoRII	CCWGG	3 cut(s)	75, 86, 114
Esp3I	CGTCTC	1 cut(s)	58
FaiI	YATR	4 cut(s)	30, 32, 49, 51
FaqI	GGGAC	1 cut(s)	173
Fnu4HI	GCNGC	4 cut(s)	213, 249, 308, 325
FokI	GGATG	1 cut(s)	245
Fsp4HI	GCNGC	4 cut(s)	213, 249, 308, 325
FspBI	CTAG	2 cut(s)	8, 38
FspI	TGCGCA	1 cut(s)	323
GlaI	GCGC	1 cut(s)	323
GluI	GCNGC	4 cut(s)	213, 249, 308, 325
HaeIII	GGCC	2 cut(s)	81, 120
HapII	CCGG	1 cut(s)	186
HhaI	GCGC	1 cut(s)	324
Hin6I	GCGC	1 cut(s)	322
HinP1I	GCGC	1 cut(s)	322
HinfI	GANTC	2 cut(s)	154, 285
HpaII	CCGG	1 cut(s)	186
HphI	GGTGA	2 cut(s)	179, 294
Hpy166II	GTNNAC	1 cut(s)	302
Hpy188I	TCNGA	3 cut(s)	241, 357, 371
Hpy188III	TCNNGA	4 cut(s)	151, 158, 186, 232
Hpy8I	GTNNAC	1 cut(s)	302
HpyAV	CCTTC	2 cut(s)	157, 213
HpyCH4III	ACNGT	1 cut(s)	57
HpyCH4IV	ACGT	1 cut(s)	67
HpyCH4V	TGCA	3 cut(s)	98, 251, 310
HpyF10VI	GCNNNNNNNGC	2 cut(s)	104, 333
HpyF3I	CTNAG	2 cut(s)	173, 356
HpySE526I	ACGT	1 cut(s)	67
HspAI	GCGC	1 cut(s)	322
Kpn2I	TCCGGA	1 cut(s)	185
LmnI	GCTCC	1 cut(s)	135
Lsp1109I	GCAGC	4 cut(s)	224, 235, 294, 336
LweI	GCATC	1 cut(s)	50
MaeI	CTAG	2 cut(s)	8, 38
MaeII	ACGT	1 cut(s)	67
MaeIII	GTNAC	2 cut(s)	20, 167
MboII	GAAGA	2 cut(s)	135, 174
MhlI	GDGCHC	3 cut(s)	109, 140, 362
MluCI	AATT	4 cut(s)	124, 243, 275, 365
MnlI	CCTC	4 cut(s)	158, 239, 247, 325
MroI	TCCGGA	1 cut(s)	185
MspA1I	CMGCKG	1 cut(s)	307
MspI	CCGG	1 cut(s)	186
MspR9I	CCNGG	3 cut(s)	77, 88, 116
MvaI	CCWGG	3 cut(s)	77, 88, 116
MvnI	CGCG	1 cut(s)	152
MwoI	GCNNNNNNNGC	2 cut(s)	104, 333
NlaIV	GGNNCC	1 cut(s)	108
NmuCI	GTSAC	1 cut(s)	167
NruI	TCGCGA	1 cut(s)	152
NsbI	TGCGCA	1 cut(s)	323
PfeI	GAWTC	2 cut(s)	154, 285
PkrI	GCNGC	4 cut(s)	214, 250, 309, 326
Psp6I	CCWGG	3 cut(s)	75, 86, 114
PspEI	GGTNACC	1 cut(s)	167
PspGI	CCWGG	3 cut(s)	75, 86, 114
PspN4I	GGNNCC	1 cut(s)	108
PspPI	GGNCC	4 cut(s)	79, 90, 118, 188
PstI	CTGCAG	2 cut(s)	253, 312
PstNI	CAGNNNCTG	1 cut(s)	288
RruI	TCGCGA	1 cut(s)	152
RsaI	GTAC	3 cut(s)	54, 346, 385
RsaNI	GTAC	3 cut(s)	53, 345, 384
SatI	GCNGC	4 cut(s)	213, 249, 308, 325
Sau96I	GGNCC	4 cut(s)	79, 90, 118, 188
ScrFI	CCNGG	3 cut(s)	77, 88, 116
SduI	GDGCHC	3 cut(s)	109, 140, 362
SetI	ASST	9 cut(s)	22, 70, 112, 169, 174, 217, 239, 329, 338
SfaNI	GCATC	1 cut(s)	50
SfcI	CTRYAG	2 cut(s)	249, 308
SinI	GGWCC	2 cut(s)	90, 188
Sse9I	AATT	4 cut(s)	124, 243, 275, 365
SsiI	CCGC	1 cut(s)	305
SspMI	CTAG	2 cut(s)	8, 38
StyD4I	CCNGG	3 cut(s)	75, 86, 114
TaaI	ACNGT	1 cut(s)	57
TaiI	ACGT	1 cut(s)	70
TaqI	TCGA	1 cut(s)	269
TaqII	GACCGA	1 cut(s)	196
TasI	AATT	4 cut(s)	124, 243, 275, 365
TatI	WGTACW	1 cut(s)	52
TfiI	GAWTC	2 cut(s)	154, 285
TscAI	CASTG	2 cut(s)	100, 198
TseFI	GTSAC	1 cut(s)	167
TseI	GCWGC	4 cut(s)	212, 248, 307, 324
Tsp45I	GTSAC	1 cut(s)	167
TspRI	CASTG	2 cut(s)	100, 198
VpaK11BI	GGWCC	2 cut(s)	90, 188
XapI	RAATTY	1 cut(s)	275
XspI	CTAG	2 cut(s)	8, 38

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.