FvH4_2g15620

V-type proton ATPase subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0007224
Physical Location & Seq
Forward (+)
13710562 .. 13715738
5177 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g15620.t1

Sequence Viewer

Length: 1473 bp
ATGGCTGTTTCACAAAACAATCACGATATGGAGGAGGGGACACTAGAGGTCGGCATGGAGTACAGGACTGTCTCTGGTGTGGCTGGACCTCTGGTTATCCTTGAAAAAGTTAAGGGACCCAAGTTTCAGGAGATTGTTAATATTCGGTTGGGAGATGGAACAATTCGACGTGGCCAAGTCCTGGAGGTTGATGGAGAGAAAGCTATTGTTCAGGTTTTCGAAGGAACATCTGGAATTGACAACAAGTATACCACAGTGCAATTTACAGGAGAGGTTTTGAAAACTCCAGTCTCTCTGGACATGCTTGGGCGGATCTTTAATGGATCTGGGAAACCCATTGACAATGGGCCCCCAATTTTGCCTGAGGCGTACCTCGACATATCTGGTAGTTCTATCAATCCCAGTGAGAGAACATATCCTGAAGAGATGATTCAAACGGGAATTTCGACAATTGATGTAATGAATTCCATTGCCAGAGGACAAAAGATCCCACTTTTCTCTGCTGCTGGTCTTCCTCATAATGAGATTGCAGCTCAGATATGTCGCCAGGCTGGTCTGGTCAAGCGGTTGGAGAAATCTGACAATCTTCTTGACGCTAGGGATGGGGAAGACGACAATTTCGCCATTGTGTTTGCTGCTATGGGAGTAAATATGGAGACTGCACAGTTCTTCAAACGTGATTTTGAGGAAAATGGTTCAATGGAGAGGGTCACCCTTTTTCTTAATCTGGCAAATGACCCTACAATTGAACGTATTATTACTCCTCGTATTGCTCTTACTACTGCAGAGTATCTGGCATATGTATGTGGGAAGCATGTCCTTGTCATACTGACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAGGAAGTGCCTGGAAGGCGTGGATATCCCGGGTACATGTATACCGATTTGGCGCAAATCTATGAGCGTGCTGGACGAATTGAAGGGCGAAAAGGCTCCATCACACAAATTCCAATTTTGACTATGCCCAATGATGATATTACGCATCCCACCCCGGATCTTACAGGATACATTACTGAGGGACAGGTATACATTGACAGGCAGCTCCACAACAGACAGATCTACCCACCAATCAATGTCCTCCCATCTCTTTCTCGTTTGATGAAGAGTGCTATTGGTGAAGGGATGACTCGCAAGGATCATTCTGATGTATCCAATCAGTTGTATGCAAATTATGCAATTGGGAAGGATGTCCAGGCAATGAAAGCTGTGGTTGGAGAGGAAGCTCTTTCTTCTGAGGACTTGCTATACCTGGAGTTTTTGGACAAGTTCGAGAAGAAGTTTGTGAGCCAAGGAGCTTATGATACACGTAGTATCTTCCAGTCTCTCGATTTGGCATGGACATTGCTTCGCATTTTCCCCCGTGAGCTTCTCCACCGTATACCTATAAAGACCCTAGATCTGTTCTACAGCAGAGATGCAACAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001678 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005911 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007165 GO:0008064 GO:0008092 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009743 GO:0009746 GO:0009749 GO:0009756 GO:0009757 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010182 GO:0010255 GO:0010468 GO:0010556 GO:0010639 GO:0012505 GO:0016020 GO:0016043 GO:0019219 GO:0019222 GO:0019725 GO:0022607 GO:0023052 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031090 GO:0031323 GO:0031326 GO:0031333 GO:0032271 GO:0032272 GO:0032535 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0033500 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046686 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051171 GO:0051252 GO:0051493 GO:0051494 GO:0051693 GO:0051716 GO:0055044 GO:0055082 GO:0060255 GO:0061572 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071840 GO:0071944 GO:0080090 GO:0090066 GO:0097435 GO:0098588 GO:0098805 GO:0110053 GO:1901700 GO:1901701 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04145 ko04150 ko04721 ko04966 ko05110 ko05120 ko05323 map00190 map01100 map04145 map04150 map04721 map04966 map05110 map05120 map05323
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N

Protein Analysis

491

Amino Acids

54.53

Weight (kDa)

5.07

Isoelectric Point (pI)

31.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_ab_N PF02874 24 - 90 8.4e-15 ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab PF00006 147 - 379 3.3e-75 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_VA_C PF22919 385 - 483 1e-33 C-terminal domain of V and A type ATP synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 181
AccI GTMKAC 4 cut(s) 248, 923, 1071, 1423
AciI CCGC 2 cut(s) 310, 565
AclWI GGATC 5 cut(s) 320, 331, 481, 1047, 1188
AcoI YGGCCR 1 cut(s) 172
AcsI RAATTY 3 cut(s) 441, 463, 990
AcuI CTGAAG 1 cut(s) 441
AfaI GTAC 3 cut(s) 62, 371, 917
AfiI CCNNNNNNNGG 1 cut(s) 181
AflIII ACRYGT 2 cut(s) 918, 1349
AgsI TTSAA 7 cut(s) 104, 280, 434, 673, 699, 749, 965
AjiI CACGTC 1 cut(s) 170
AjnI CCWGG 5 cut(s) 180, 546, 892, 1236, 1293
AluBI AGCT 7 cut(s) 203, 533, 1087, 1250, 1268, 1340, 1411
AluI AGCT 7 cut(s) 203, 533, 1087, 1250, 1268, 1340, 1411
Alw26I GTCTC 4 cut(s) 76, 295, 650, 1371
AlwI GGATC 5 cut(s) 320, 331, 481, 1047, 1188
Ama87I CYCGRG 2 cut(s) 879, 911
AoxI GGCC 2 cut(s) 172, 347
ApaI GGGCCC 1 cut(s) 351
ApeKI GCWGC 5 cut(s) 503, 530, 635, 875, 1084
ApoI RAATTY 3 cut(s) 441, 463, 990
ArsI GACNNNNNNTTYG 2 cut(s) 602, 634
AspLEI GCGC 1 cut(s) 937
AspS9I GGNCC 4 cut(s) 86, 116, 347, 348
AsuC2I CCSGG 3 cut(s) 912, 913, 1037
AsuHPI GGTGA 2 cut(s) 703, 1172
AsuII TTCGAA 1 cut(s) 219
AvaI CYCGRG 2 cut(s) 879, 911
AvaII GGWCC 2 cut(s) 86, 116
AxyI CCTNAGG 1 cut(s) 363
BaeGI GKGCMC 1 cut(s) 351
BalI TGGCCA 1 cut(s) 174
BanII GRGCYC 1 cut(s) 351
BbsI GAAGAC 2 cut(s) 503, 615
BbvI GCAGC 5 cut(s) 490, 542, 622, 862, 1096
BccI CCATC 5 cut(s) 149, 185, 596, 989, 1135
BciT130I CCWGG 5 cut(s) 182, 548, 894, 1238, 1295
BciVI GTATCC 2 cut(s) 1043, 1204
BcnI CCSGG 3 cut(s) 912, 913, 1037
BcoDI GTCTC 4 cut(s) 76, 295, 650, 1371
BfaI CTAG 3 cut(s) 44, 597, 1439
BfmI CTRYAG 2 cut(s) 783, 1450
BfuI GTATCC 2 cut(s) 1043, 1204
BglI GCCNNNNNGGC 1 cut(s) 898
BglII AGATCT 2 cut(s) 1101, 1441
BisI GCNGC 5 cut(s) 504, 531, 636, 876, 1085
BlsI GCNGC 5 cut(s) 505, 532, 637, 877, 1086
Bme1390I CCNGG 8 cut(s) 182, 548, 894, 912, 913, 1037, 1238, 1295
Bme18I GGWCC 2 cut(s) 86, 116
BmeT110I CYCGRG 2 cut(s) 879, 911
BmgBI CACGTC 1 cut(s) 170
BmgT120I GGNCC 4 cut(s) 86, 116, 347, 348
BmiI GGNNCC 5 cut(s) 117, 118, 349, 350, 979
BmrFI CCNGG 8 cut(s) 182, 548, 894, 912, 913, 1037, 1238, 1295
BmrI ACTGGG 1 cut(s) 396
BmsI GCATC 3 cut(s) 844, 1036, 1450
BmuI ACTGGG 1 cut(s) 396
BpiI GAAGAC 2 cut(s) 503, 615
BpmI CTGGAG 3 cut(s) 203, 270, 1316
Bpu14I TTCGAA 1 cut(s) 219
BpuMI CCSGG 3 cut(s) 912, 913, 1037
BsaAI YACGTR 1 cut(s) 1352
BsaJI CCNNGG 3 cut(s) 911, 1035, 1333
Bsc4I CCNNNNNNNGG 1 cut(s) 181
Bse1I ACTGG 3 cut(s) 287, 402, 1363
Bse21I CCTNAGG 1 cut(s) 363
Bse3DI GCAATG 3 cut(s) 468, 1248, 1385
BseBI CCWGG 5 cut(s) 182, 548, 894, 1238, 1295
BseDI CCNNGG 3 cut(s) 911, 1035, 1333
BseGI GGATG 4 cut(s) 607, 1027, 1173, 1237
BseLI CCNNNNNNNGG 1 cut(s) 181
BseMI GCAATG 3 cut(s) 468, 1248, 1385
BseMII CTCAG 4 cut(s) 354, 548, 1050, 1269
BseNI ACTGG 3 cut(s) 287, 402, 1363
BseRI GAGGAG 2 cut(s) 47, 753
BseSI GKGCMC 1 cut(s) 351
BseXI GCAGC 5 cut(s) 490, 542, 622, 862, 1096
BsgI GTGCAG 1 cut(s) 645
BshFI GGCC 2 cut(s) 174, 349
BsiHKCI CYCGRG 2 cut(s) 879, 911
BsiSI CCGG 2 cut(s) 912, 1037
BslFI GGGAC 3 cut(s) 52, 129, 1077
BslI CCNNNNNNNGG 1 cut(s) 181
BsmAI GTCTC 4 cut(s) 76, 295, 650, 1371
BsmFI GGGAC 3 cut(s) 52, 129, 1077
BsnI GGCC 2 cut(s) 174, 349
BsoBI CYCGRG 2 cut(s) 879, 911
Bsp119I TTCGAA 1 cut(s) 219
Bsp120I GGGCCC 1 cut(s) 347
Bsp1286I GDGCHC 1 cut(s) 351
Bsp143I GATC 7 cut(s) 312, 323, 486, 1039, 1101, 1180, 1441
BspACI CCGC 2 cut(s) 310, 565
BspANI GGCC 2 cut(s) 174, 349
BspCNI CTCAG 4 cut(s) 355, 547, 1051, 1270
BspLI GGNNCC 5 cut(s) 117, 118, 349, 350, 979
BspMAI CTGCAG 1 cut(s) 787
BspPI GGATC 5 cut(s) 320, 331, 481, 1047, 1188
BspQI GCTCTTC 1 cut(s) 864
BspT104I TTCGAA 1 cut(s) 219
BsrDI GCAATG 3 cut(s) 468, 1248, 1385
BsrI ACTGG 3 cut(s) 287, 402, 1363
BssECI CCNNGG 3 cut(s) 911, 1035, 1333
BssMI GATC 7 cut(s) 312, 323, 486, 1039, 1101, 1180, 1441
BssNAI GTATAC 4 cut(s) 249, 924, 1072, 1424
BssT1I CCWWGG 1 cut(s) 1333
Bst1107I GTATAC 4 cut(s) 249, 924, 1072, 1424
Bst2UI CCWGG 5 cut(s) 182, 548, 894, 1238, 1295
Bst4CI ACNGT 4 cut(s) 70, 256, 666, 1421
Bst6I CTCTTC 3 cut(s) 417, 864, 1142
BstAPI GCANNNNNTGC 1 cut(s) 1217
BstBAI YACGTR 1 cut(s) 1352
BstBI TTCGAA 1 cut(s) 219
BstC8I GCNNGC 1 cut(s) 951
BstDEI CTNAG 4 cut(s) 363, 534, 1059, 1278
BstEII GGTNACC 1 cut(s) 709
BstF5I GGATG 4 cut(s) 607, 1027, 1173, 1237
BstHHI GCGC 1 cut(s) 937
BstKTI GATC 7 cut(s) 315, 326, 489, 1042, 1104, 1183, 1444
BstMAI GTCTC 4 cut(s) 76, 295, 650, 1371
BstMBI GATC 7 cut(s) 312, 323, 486, 1039, 1101, 1180, 1441
BstMWI GCNNNNNNNGC 3 cut(s) 898, 1217, 1247
BstNI CCWGG 5 cut(s) 182, 548, 894, 1238, 1295
BstNSI RCATGY 3 cut(s) 304, 818, 922
BstPI GGTNACC 1 cut(s) 709
BstSCI CCNGG 8 cut(s) 180, 546, 892, 910, 911, 1035, 1236, 1293
BstSFI CTRYAG 2 cut(s) 783, 1450
BstSLI GKGCMC 1 cut(s) 351
BstV1I GCAGC 5 cut(s) 490, 542, 622, 862, 1096
BstV2I GAAGAC 2 cut(s) 503, 615
BstX2I RGATCY 6 cut(s) 312, 323, 486, 1039, 1101, 1441
BstYI RGATCY 6 cut(s) 312, 323, 486, 1039, 1101, 1441
BstZ17I GTATAC 4 cut(s) 249, 924, 1072, 1424
Bsu36I CCTNAGG 1 cut(s) 363
BsuI GTATCC 2 cut(s) 1043, 1204
BsuRI GGCC 2 cut(s) 174, 349
BtrI CACGTC 1 cut(s) 170
BtsCI GGATG 4 cut(s) 607, 1027, 1173, 1237
BtsIMutI CAGTG 2 cut(s) 261, 409
Cac8I GCNNGC 1 cut(s) 951
CfoI GCGC 1 cut(s) 937
Cfr13I GGNCC 4 cut(s) 86, 116, 347, 348
Cfr9I CCCGGG 1 cut(s) 911
CseI GACGC 1 cut(s) 602
Csp6I GTAC 3 cut(s) 61, 370, 916
CviAII CATG 5 cut(s) 55, 301, 815, 919, 1380
CviQI GTAC 3 cut(s) 61, 370, 916
DdeI CTNAG 4 cut(s) 363, 534, 1059, 1278
DpnI GATC 7 cut(s) 314, 325, 488, 1041, 1103, 1182, 1443
DpnII GATC 7 cut(s) 312, 323, 486, 1039, 1101, 1180, 1441
EaeI YGGCCR 1 cut(s) 172
Eam1104I CTCTTC 3 cut(s) 417, 864, 1142
EarI CTCTTC 3 cut(s) 417, 864, 1142
EciI GGCGGA 1 cut(s) 325
Eco130I CCWWGG 1 cut(s) 1333
Eco24I GRGCYC 1 cut(s) 351
Eco32I GATATC 1 cut(s) 908
Eco47I GGWCC 2 cut(s) 86, 116
Eco57I CTGAAG 1 cut(s) 441
Eco81I CCTNAGG 1 cut(s) 363
Eco88I CYCGRG 2 cut(s) 879, 911
Eco91I GGTNACC 1 cut(s) 709
EcoO109I RGGNCCY 2 cut(s) 116, 348
EcoO65I GGTNACC 1 cut(s) 709
EcoRI GAATTC 1 cut(s) 463
EcoRII CCWGG 5 cut(s) 180, 546, 892, 1236, 1293
EcoRV GATATC 1 cut(s) 908
EcoT14I CCWWGG 1 cut(s) 1333
EcoT38I GRGCYC 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 1333
FaeI CATG 5 cut(s) 58, 304, 818, 922, 1383
FaqI GGGAC 3 cut(s) 52, 129, 1077
FatI CATG 5 cut(s) 54, 300, 814, 918, 1379
FauNDI CATATG 1 cut(s) 799
FblI GTMKAC 4 cut(s) 248, 923, 1071, 1423
Fnu4HI GCNGC 5 cut(s) 504, 531, 636, 876, 1085
FokI GGATG 4 cut(s) 614, 1014, 1180, 1244
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 5 cut(s) 504, 531, 636, 876, 1085
FspBI CTAG 3 cut(s) 44, 597, 1439
GlaI GCGC 1 cut(s) 936
GluI GCNGC 5 cut(s) 504, 531, 636, 876, 1085
GsuI CTGGAG 3 cut(s) 203, 270, 1316
HaeIII GGCC 2 cut(s) 174, 349
HapII CCGG 2 cut(s) 912, 1037
HgaI GACGC 1 cut(s) 602
HhaI GCGC 1 cut(s) 937
Hin1II CATG 5 cut(s) 58, 304, 818, 922, 1383
Hin6I GCGC 1 cut(s) 935
HinP1I GCGC 1 cut(s) 935
HinfI GANTC 2 cut(s) 430, 1171
HpaII CCGG 2 cut(s) 912, 1037
HphI GGTGA 2 cut(s) 703, 1172
Hpy166II GTNNAC 4 cut(s) 249, 924, 1072, 1424
Hpy188I TCNGA 4 cut(s) 537, 580, 1189, 1279
Hpy188III TCNNGA 9 cut(s) 23, 128, 231, 296, 419, 590, 863, 1315, 1370
Hpy8I GTNNAC 4 cut(s) 249, 924, 1072, 1424
Hpy99I CGWCG 1 cut(s) 171
HpyAV CCTTC 5 cut(s) 215, 891, 959, 1157, 1222
HpyCH4III ACNGT 4 cut(s) 70, 256, 666, 1421
HpyCH4IV ACGT 4 cut(s) 169, 676, 751, 1351
HpyCH4V TGCA 7 cut(s) 259, 530, 662, 785, 1211, 1220, 1463
HpyF10VI GCNNNNNNNGC 3 cut(s) 898, 1217, 1247
HpyF3I CTNAG 4 cut(s) 363, 534, 1059, 1278
HpySE526I ACGT 4 cut(s) 169, 676, 751, 1351
Hsp92II CATG 5 cut(s) 58, 304, 818, 922, 1383
HspAI GCGC 1 cut(s) 935
KflI GGGWCCC 1 cut(s) 116
Kzo9I GATC 7 cut(s) 312, 323, 486, 1039, 1101, 1180, 1441
LguI GCTCTTC 1 cut(s) 864
LmnI GCTCC 3 cut(s) 983, 1092, 1337
Lsp1109I GCAGC 5 cut(s) 490, 542, 622, 862, 1096
LweI GCATC 3 cut(s) 844, 1036, 1450
MaeI CTAG 3 cut(s) 44, 597, 1439
MaeII ACGT 4 cut(s) 169, 676, 751, 1351
MaeIII GTNAC 1 cut(s) 709
MalI GATC 7 cut(s) 314, 325, 488, 1041, 1103, 1182, 1443
MboI GATC 7 cut(s) 312, 323, 486, 1039, 1101, 1180, 1441
MfeI CAATTG 3 cut(s) 450, 744, 1221
MflI RGATCY 6 cut(s) 312, 323, 486, 1039, 1101, 1441
MhlI GDGCHC 1 cut(s) 351
MlsI TGGCCA 1 cut(s) 174
MluNI TGGCCA 1 cut(s) 174
MlyI GAGTC 1 cut(s) 1165
MmeI TCCRAC 2 cut(s) 549, 1237
Mox20I TGGCCA 1 cut(s) 174
MscI TGGCCA 1 cut(s) 174
MseI TTAA 4 cut(s) 111, 138, 318, 723
MslI CAYNNNNRTG 2 cut(s) 802, 1188
Msp20I TGGCCA 1 cut(s) 174
MspI CCGG 2 cut(s) 912, 1037
MspR9I CCNGG 8 cut(s) 182, 548, 894, 912, 913, 1037, 1238, 1295
MunI CAATTG 3 cut(s) 450, 744, 1221
MvaI CCWGG 5 cut(s) 182, 548, 894, 1238, 1295
MwoI GCNNNNNNNGC 3 cut(s) 898, 1217, 1247
NciI CCSGG 3 cut(s) 912, 913, 1037
NdeI CATATG 1 cut(s) 799
NdeII GATC 7 cut(s) 312, 323, 486, 1039, 1101, 1180, 1441
NlaIII CATG 5 cut(s) 58, 304, 818, 922, 1383
NlaIV GGNNCC 5 cut(s) 117, 118, 349, 350, 979
NmuCI GTSAC 1 cut(s) 709
NspI RCATGY 3 cut(s) 304, 818, 922
NspV TTCGAA 1 cut(s) 219
PciI ACATGT 1 cut(s) 918
PciSI GCTCTTC 1 cut(s) 864
PcsI WCGNNNNNNNCGW 1 cut(s) 443
PfeI GAWTC 1 cut(s) 430
PflMI CCANNNNNTGG 1 cut(s) 181
PfoI TCCNGGA 1 cut(s) 180
PkrI GCNGC 5 cut(s) 505, 532, 637, 877, 1086
PleI GAGTC 1 cut(s) 1165
PpsI GAGTC 1 cut(s) 1165
Ppu21I YACGTR 1 cut(s) 1352
PpuMI RGGWCCY 1 cut(s) 116
PscI ACATGT 1 cut(s) 918
Psp5II RGGWCCY 1 cut(s) 116
Psp6I CCWGG 5 cut(s) 180, 546, 892, 1236, 1293
PspEI GGTNACC 1 cut(s) 709
PspGI CCWGG 5 cut(s) 180, 546, 892, 1236, 1293
PspN4I GGNNCC 5 cut(s) 117, 118, 349, 350, 979
PspOMI GGGCCC 1 cut(s) 347
PspPI GGNCC 4 cut(s) 86, 116, 347, 348
PspPPI RGGWCCY 1 cut(s) 116
PstI CTGCAG 1 cut(s) 787
PsuI RGATCY 6 cut(s) 312, 323, 486, 1039, 1101, 1441
RsaI GTAC 3 cut(s) 62, 371, 917
RsaNI GTAC 3 cut(s) 61, 370, 916
RseI CAYNNNNRTG 2 cut(s) 802, 1188
SapI GCTCTTC 1 cut(s) 864
SaqAI TTAA 4 cut(s) 111, 138, 318, 723
SatI GCNGC 5 cut(s) 504, 531, 636, 876, 1085
Sau3AI GATC 7 cut(s) 312, 323, 486, 1039, 1101, 1180, 1441
Sau96I GGNCC 4 cut(s) 86, 116, 347, 348
SchI GAGTC 1 cut(s) 1165
ScrFI CCNGG 8 cut(s) 182, 548, 894, 912, 913, 1037, 1238, 1295
SduI GDGCHC 1 cut(s) 351
SfaNI GCATC 3 cut(s) 844, 1036, 1450
SfcI CTRYAG 2 cut(s) 783, 1450
SfuI TTCGAA 1 cut(s) 219
SinI GGWCC 2 cut(s) 86, 116
SmaI CCCGGG 1 cut(s) 913
SmiMI CAYNNNNRTG 2 cut(s) 802, 1188
SsiI CCGC 2 cut(s) 310, 565
SspI AATATT 1 cut(s) 142
SspMI CTAG 3 cut(s) 44, 597, 1439
StyD4I CCNGG 8 cut(s) 180, 546, 892, 910, 911, 1035, 1236, 1293
StyI CCWWGG 1 cut(s) 1333
TaaI ACNGT 4 cut(s) 70, 256, 666, 1421
TaiI ACGT 4 cut(s) 172, 679, 754, 1354
TaqI TCGA 6 cut(s) 166, 219, 375, 446, 1314, 1371
TatI WGTACW 1 cut(s) 60
TfiI GAWTC 1 cut(s) 430
Tru1I TTAA 4 cut(s) 111, 138, 318, 723
Tru9I TTAA 4 cut(s) 111, 138, 318, 723
TscAI CASTG 2 cut(s) 261, 409
TseFI GTSAC 1 cut(s) 709
TseI GCWGC 5 cut(s) 503, 530, 635, 875, 1084
Tsp45I GTSAC 1 cut(s) 709
TspDTI ATGAA 3 cut(s) 476, 1160, 1259
TspMI CCCGGG 1 cut(s) 911
TspRI CASTG 2 cut(s) 261, 409
Van91I CCANNNNNTGG 1 cut(s) 181
VpaK11BI GGWCC 2 cut(s) 86, 116
XapI RAATTY 3 cut(s) 441, 463, 990
XceI RCATGY 3 cut(s) 304, 818, 922
XmaI CCCGGG 1 cut(s) 911
XmiI GTMKAC 4 cut(s) 248, 923, 1071, 1423
XspI CTAG 3 cut(s) 44, 597, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.