MD10G1127400.v1.1

V-type proton ATPase subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0007224
Physical Location & Seq
Forward (+)
20780994 .. 20786376
5383 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1127400.v1.1.491

Sequence Viewer

Length: 1680 bp
ATGAAGATATTAATTTATCTATTGTCATTCGTAATTAATTTTCATAATCATTCCTGTGTCACTGATTTTCTATTTTTTTTTTGTTTAGTCAATCAGATATTTAGATCTCACTCTTTTTTATTCGTCTTCCTCTTCGCCCTTTCTGCTCCTTTCTCTCTCTTGCTTCCGCTTGGCTCCGCGCGCTACAGATCGAAAAGTAGCTTGCAAATGGCTGTTTCACAAAACAATCACGACATGGACGAGGGAAACCTAGAGGTTGGAATGGAGTACAGAACTGTGTCTGGTGTGGCCGGACCTCTGGTTATCCTTGAAAAAGTTAAGGGACCTAAGTTTCAGGAGATTGTTAATATTCGTTTGGGAGATGGAACAACTAGACGCGGTCAAGTCCTGGAAGTTGATGGAGAGAAAGCTATTGTTCAGGTTTTCGAAGGAACATCTGGAATTGACAACAAGTACACTACTGTGCAATTTACAGGAGAGGTTTTGAAAACTCCAGTCTCACTGGACATGCTTGGGCGAATCTTTAATGGCTCTGGGAAGCCCATTGATAATGGCCCCCCTATCTTGCCTGAGGCTTACCTAGACATATCTGGGAGTTCTATTAATCCTAGTGAGAGAACATATCCTGAAGAAATGATTCAGACTGGAATTTCTACAATTGATGTCATGAACTCCATTGCTAGAGGACAAAAAATCCCACTTTTCTCTGCTGCTGGTCTTCCTCATAATGAAATAGCTGCTCAGATATGTCGCCAGGCTGGTTTGGTCAAGCGGTTGGAGAAATCTGAAAGTCTTCTTGATGCTGGGGACATAGAAGACGACAACTTTGCCATTGTGTTTGCAGCTATGGGAGTAAATATGGAGACTGCGCAGTTCTTTAAACGGGATTTTGAGGAAAATGGCTCAATGGAGAGAGTGACCCTCTTTCTGAATCTGGCAAATGACCCTACAATTGAACGTATTATTACTCCTCGTATTGCTCTTACTACTGCAGAATATTTGGCGTATGAATGTGGGAAGCACGTTCTTGTCATTCTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCCGCTGCCCGAGAGGAAGTGCCTGGAAGGCGTGGATACCCCGGGTACATGTATACTGATCTGGCACAAATCTATGAGCGTGCTGGACGAATTGAAGGGCGAAAAGGCTCTATTACACAAATTCCAATTCTAACTATGCCAAATGATGATATTACCCACCCCACTCCTGATCTTACGGGATATATTACCGAGGGACAGATATACATTGACAGGCAGCTCCACAACAGACAGATATACCCACCAATCAATGTCCTCCCATCACTGTCTCGTCTGATGAAGAGTGCTATTGGTGAAGGGATGACTCGCCGGGATCATTCTGATGTATCAAATCAGTTATATGCAAATTATGCTATTGGGAAGGATGTCCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCTTCGGAGGACCTGCTATACCTGGAGTTTTTGGACAAATTTGAGAAGAAGTTTGTGTCCCAAGGAGCTTATGACACCCGTAACATCTTCCAGTCCCTTGATTTGGCATGGACATTGCTGCGGATCTTCCCTCGTGAGCTTCTCCACCGTATACCTGCAAAGACCCTTGACCTGTTCTACAGCAGAGACACCGCTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001678 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005911 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007165 GO:0008064 GO:0008092 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009743 GO:0009746 GO:0009749 GO:0009756 GO:0009757 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010182 GO:0010255 GO:0010468 GO:0010556 GO:0010639 GO:0012505 GO:0016020 GO:0016043 GO:0019219 GO:0019222 GO:0019725 GO:0022607 GO:0023052 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031090 GO:0031323 GO:0031326 GO:0031333 GO:0032271 GO:0032272 GO:0032535 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0033500 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046686 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051171 GO:0051252 GO:0051493 GO:0051494 GO:0051693 GO:0051716 GO:0055044 GO:0055082 GO:0060255 GO:0061572 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071840 GO:0071944 GO:0080090 GO:0090066 GO:0097435 GO:0098588 GO:0098805 GO:0110053 GO:1901700 GO:1901701 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04145 ko04150 ko04721 ko04966 ko05110 ko05120 ko05323 map00190 map01100 map04145 map04150 map04721 map04966 map05110 map05120 map05323
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N

Protein Analysis

560

Amino Acids

62.55

Weight (kDa)

5.33

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_ab_N PF02874 93 - 159 5.1e-15 ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab PF00006 216 - 448 1.6e-75 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_VA_C PF22919 454 - 552 8.9e-34 C-terminal domain of V and A type ATP synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 870
Acc36I ACCTGC 2 cut(s) 1500, 1642
AccI GTMKAC 2 cut(s) 1130, 1630
AccII CGCG 3 cut(s) 179, 181, 378
AciI CCGC 7 cut(s) 167, 177, 378, 772, 1080, 1600, 1671
AclWI GGATC 2 cut(s) 1395, 1610
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 3 cut(s) 648, 1197, 1517
AcuI CTGAAG 1 cut(s) 648
AfaI GTAC 3 cut(s) 269, 455, 1124
AfiI CCNNNNNNNGG 1 cut(s) 1582
AflIII ACRYGT 1 cut(s) 1125
AgsI TTSAA 4 cut(s) 311, 487, 956, 1172
AjnI CCWGG 5 cut(s) 387, 753, 1099, 1443, 1500
AleI CACNNNNGTG 1 cut(s) 461
AluBI AGCT 8 cut(s) 201, 410, 737, 845, 1294, 1457, 1547, 1618
AluI AGCT 8 cut(s) 201, 410, 737, 845, 1294, 1457, 1547, 1618
Alw26I GTCTC 4 cut(s) 502, 857, 1347, 1659
AlwI GGATC 2 cut(s) 1395, 1610
Ama87I CYCGRG 2 cut(s) 1086, 1118
AoxI GGCC 2 cut(s) 288, 553
ApeKI GCWGC 6 cut(s) 710, 737, 842, 1082, 1291, 1597
ApoI RAATTY 3 cut(s) 648, 1197, 1517
ArsI GACNNNNNNTTYG 2 cut(s) 809, 841
AseI ATTAAT 3 cut(s) 11, 36, 603
Asp700I GAANNNNTTC 2 cut(s) 636, 792
AspLEI GCGC 3 cut(s) 181, 183, 871
AspS9I GGNCC 4 cut(s) 293, 323, 554, 1489
AsuC2I CCSGG 3 cut(s) 1119, 1120, 1385
AsuHPI GGTGA 1 cut(s) 1379
AsuII TTCGAA 1 cut(s) 426
AvaI CYCGRG 2 cut(s) 1086, 1118
AvaII GGWCC 3 cut(s) 293, 323, 1489
AxyI CCTNAGG 1 cut(s) 570
BauI CACGAG 1 cut(s) 1611
BbsI GAAGAC 4 cut(s) 118, 710, 785, 822
BbvI GCAGC 6 cut(s) 697, 724, 854, 1069, 1303, 1584
BccI CCATC 3 cut(s) 356, 392, 1342
BcgI CGANNNNNNTGC 4 cut(s) 809, 843, 1464, 1498
BciT130I CCWGG 5 cut(s) 389, 755, 1101, 1445, 1502
BciVI GTATCC 2 cut(s) 1087, 1106
BcnI CCSGG 3 cut(s) 1119, 1120, 1385
BcoDI GTCTC 4 cut(s) 502, 857, 1347, 1659
BfaI CTAG 5 cut(s) 251, 372, 581, 609, 681
BfmI CTRYAG 3 cut(s) 184, 990, 1657
BfuAI ACCTGC 2 cut(s) 1500, 1642
BfuI GTATCC 2 cut(s) 1087, 1106
BglI GCCNNNNNGGC 1 cut(s) 1105
BglII AGATCT 1 cut(s) 104
BisI GCNGC 6 cut(s) 711, 738, 843, 1083, 1292, 1598
BlsI GCNGC 6 cut(s) 712, 739, 844, 1084, 1293, 1599
Bme1390I CCNGG 8 cut(s) 389, 755, 1101, 1119, 1120, 1385, 1445, 1502
Bme18I GGWCC 3 cut(s) 293, 323, 1489
BmeT110I CYCGRG 2 cut(s) 1086, 1118
BmgT120I GGNCC 4 cut(s) 293, 323, 554, 1489
BmiI GGNNCC 3 cut(s) 175, 324, 556
BmrFI CCNGG 8 cut(s) 389, 755, 1101, 1119, 1120, 1385, 1445, 1502
BmsI GCATC 2 cut(s) 790, 1051
BpiI GAAGAC 4 cut(s) 118, 710, 785, 822
BplI GAGNNNNNCTC 2 cut(s) 906, 938
BpmI CTGGAG 2 cut(s) 477, 1523
Bpu14I TTCGAA 1 cut(s) 426
BpuMI CCSGG 3 cut(s) 1119, 1120, 1385
BsaJI CCNNGG 4 cut(s) 1117, 1118, 1266, 1540
Bsc4I CCNNNNNNNGG 1 cut(s) 1582
Bse1I ACTGG 4 cut(s) 494, 507, 649, 1570
Bse21I CCTNAGG 1 cut(s) 570
Bse3DI GCAATG 3 cut(s) 675, 1455, 1592
BseBI CCWGG 5 cut(s) 389, 755, 1101, 1445, 1502
BseDI CCNNGG 4 cut(s) 1117, 1118, 1266, 1540
BseGI GGATG 2 cut(s) 1380, 1444
BseLI CCNNNNNNNGG 1 cut(s) 1582
BseMI GCAATG 3 cut(s) 675, 1455, 1592
BseMII CTCAG 2 cut(s) 561, 755
BseNI ACTGG 4 cut(s) 494, 507, 649, 1570
BsePI GCGCGC 1 cut(s) 179
BseRI GAGGAG 1 cut(s) 960
BseXI GCAGC 6 cut(s) 697, 724, 854, 1069, 1303, 1584
BseYI CCCAGC 1 cut(s) 803
Bsh1236I CGCG 3 cut(s) 179, 181, 378
BshFI GGCC 2 cut(s) 290, 555
BsiHKCI CYCGRG 2 cut(s) 1086, 1118
BsiSI CCGG 3 cut(s) 291, 1119, 1384
BslFI GGGAC 5 cut(s) 336, 821, 1284, 1522, 1558
BslI CCNNNNNNNGG 1 cut(s) 1582
BsmAI GTCTC 4 cut(s) 502, 857, 1347, 1659
BsmFI GGGAC 5 cut(s) 336, 821, 1284, 1522, 1558
BsnI GGCC 2 cut(s) 290, 555
BsoBI CYCGRG 2 cut(s) 1086, 1118
Bsp119I TTCGAA 1 cut(s) 426
Bsp143I GATC 6 cut(s) 104, 188, 1135, 1246, 1387, 1602
BspACI CCGC 7 cut(s) 167, 177, 378, 772, 1080, 1600, 1671
BspANI GGCC 2 cut(s) 290, 555
BspCNI CTCAG 2 cut(s) 562, 754
BspFNI CGCG 3 cut(s) 179, 181, 378
BspHI TCATGA 1 cut(s) 666
BspLI GGNNCC 3 cut(s) 175, 324, 556
BspMAI CTGCAG 1 cut(s) 994
BspMI ACCTGC 2 cut(s) 1500, 1642
BspPI GGATC 2 cut(s) 1395, 1610
BspQI GCTCTTC 1 cut(s) 1071
BspT104I TTCGAA 1 cut(s) 426
BsrDI GCAATG 3 cut(s) 675, 1455, 1592
BsrI ACTGG 4 cut(s) 494, 507, 649, 1570
BssECI CCNNGG 4 cut(s) 1117, 1118, 1266, 1540
BssHII GCGCGC 1 cut(s) 179
BssMI GATC 6 cut(s) 104, 188, 1135, 1246, 1387, 1602
BssNAI GTATAC 2 cut(s) 1131, 1631
BssSI CACGAG 1 cut(s) 1611
BssT1I CCWWGG 1 cut(s) 1540
Bst1107I GTATAC 2 cut(s) 1131, 1631
Bst2BI CACGAG 1 cut(s) 1611
Bst2UI CCWGG 5 cut(s) 389, 755, 1101, 1445, 1502
Bst4CI ACNGT 4 cut(s) 277, 463, 1341, 1628
Bst6I CTCTTC 3 cut(s) 137, 1071, 1349
BstAPI GCANNNNNTGC 1 cut(s) 1424
BstBI TTCGAA 1 cut(s) 426
BstC8I GCNNGC 3 cut(s) 181, 203, 1158
BstDEI CTNAG 3 cut(s) 327, 570, 741
BstF5I GGATG 2 cut(s) 1380, 1444
BstFNI CGCG 3 cut(s) 179, 181, 378
BstHHI GCGC 3 cut(s) 181, 183, 871
BstKTI GATC 6 cut(s) 107, 191, 1138, 1249, 1390, 1605
BstMAI GTCTC 4 cut(s) 502, 857, 1347, 1659
BstMBI GATC 6 cut(s) 104, 188, 1135, 1246, 1387, 1602
BstMWI GCNNNNNNNGC 5 cut(s) 143, 180, 1105, 1424, 1454
BstNI CCWGG 5 cut(s) 389, 755, 1101, 1445, 1502
BstNSI RCATGY 2 cut(s) 511, 1129
BstSCI CCNGG 8 cut(s) 387, 753, 1099, 1117, 1118, 1383, 1443, 1500
BstSFI CTRYAG 3 cut(s) 184, 990, 1657
BstUI CGCG 3 cut(s) 179, 181, 378
BstV1I GCAGC 6 cut(s) 697, 724, 854, 1069, 1303, 1584
BstV2I GAAGAC 4 cut(s) 118, 710, 785, 822
BstX2I RGATCY 2 cut(s) 104, 1602
BstYI RGATCY 2 cut(s) 104, 1602
BstZ17I GTATAC 2 cut(s) 1131, 1631
Bsu36I CCTNAGG 1 cut(s) 570
BsuI GTATCC 2 cut(s) 1087, 1106
BsuRI GGCC 2 cut(s) 290, 555
BtsCI GGATG 2 cut(s) 1380, 1444
BtsIMutI CAGTG 3 cut(s) 60, 500, 1337
BveI ACCTGC 2 cut(s) 1500, 1642
Cac8I GCNNGC 3 cut(s) 181, 203, 1158
CciI TCATGA 1 cut(s) 666
CfoI GCGC 3 cut(s) 181, 183, 871
Cfr13I GGNCC 4 cut(s) 293, 323, 554, 1489
Cfr9I CCCGGG 1 cut(s) 1118
CseI GACGC 1 cut(s) 384
Csp6I GTAC 3 cut(s) 268, 454, 1123
CviAII CATG 5 cut(s) 235, 508, 667, 1126, 1587
CviQI GTAC 3 cut(s) 268, 454, 1123
DdeI CTNAG 3 cut(s) 327, 570, 741
DpnI GATC 6 cut(s) 106, 190, 1137, 1248, 1389, 1604
DpnII GATC 6 cut(s) 104, 188, 1135, 1246, 1387, 1602
DraI TTTAAA 1 cut(s) 880
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 3 cut(s) 137, 1071, 1349
EarI CTCTTC 3 cut(s) 137, 1071, 1349
Eco130I CCWWGG 1 cut(s) 1540
Eco47I GGWCC 3 cut(s) 293, 323, 1489
Eco57I CTGAAG 1 cut(s) 648
Eco81I CCTNAGG 1 cut(s) 570
Eco88I CYCGRG 2 cut(s) 1086, 1118
EcoO109I RGGNCCY 2 cut(s) 323, 1489
EcoRII CCWGG 5 cut(s) 387, 753, 1099, 1443, 1500
EcoT14I CCWWGG 1 cut(s) 1540
ErhI CCWWGG 1 cut(s) 1540
FaeI CATG 5 cut(s) 238, 511, 670, 1129, 1590
FalI AAGNNNNNCTT 2 cut(s) 1461, 1493
FaqI GGGAC 5 cut(s) 336, 821, 1284, 1522, 1558
FatI CATG 5 cut(s) 234, 507, 666, 1125, 1586
FblI GTMKAC 2 cut(s) 1130, 1630
Fnu4HI GCNGC 6 cut(s) 711, 738, 843, 1083, 1292, 1598
FokI GGATG 2 cut(s) 1387, 1451
Fsp4HI GCNGC 6 cut(s) 711, 738, 843, 1083, 1292, 1598
FspBI CTAG 5 cut(s) 251, 372, 581, 609, 681
FspI TGCGCA 1 cut(s) 870
GlaI GCGC 3 cut(s) 180, 182, 870
GluI GCNGC 6 cut(s) 711, 738, 843, 1083, 1292, 1598
GsaI CCCAGC 1 cut(s) 807
GsuI CTGGAG 2 cut(s) 477, 1523
HaeIII GGCC 2 cut(s) 290, 555
HapII CCGG 3 cut(s) 291, 1119, 1384
HgaI GACGC 1 cut(s) 384
HhaI GCGC 3 cut(s) 181, 183, 871
Hin1II CATG 5 cut(s) 238, 511, 670, 1129, 1590
Hin6I GCGC 3 cut(s) 179, 181, 869
HinP1I GCGC 3 cut(s) 179, 181, 869
HinfI GANTC 4 cut(s) 519, 637, 931, 1378
HpaII CCGG 3 cut(s) 291, 1119, 1384
HphI GGTGA 1 cut(s) 1379
Hpy166II GTNNAC 3 cut(s) 456, 1131, 1631
Hpy188I TCNGA 8 cut(s) 96, 642, 744, 787, 930, 1350, 1396, 1486
Hpy188III TCNNGA 9 cut(s) 230, 335, 438, 626, 667, 797, 1070, 1244, 1613
Hpy8I GTNNAC 3 cut(s) 456, 1131, 1631
HpyAV CCTTC 5 cut(s) 422, 1098, 1166, 1364, 1429
HpyCH4III ACNGT 4 cut(s) 277, 463, 1341, 1628
HpyCH4IV ACGT 2 cut(s) 958, 1023
HpyCH4V TGCA 6 cut(s) 205, 466, 842, 992, 1418, 1637
HpyF10VI GCNNNNNNNGC 5 cut(s) 143, 180, 1105, 1424, 1454
HpyF3I CTNAG 3 cut(s) 327, 570, 741
HpySE526I ACGT 2 cut(s) 958, 1023
Hsp92II CATG 5 cut(s) 238, 511, 670, 1129, 1590
HspAI GCGC 3 cut(s) 179, 181, 869
Kzo9I GATC 6 cut(s) 104, 188, 1135, 1246, 1387, 1602
LguI GCTCTTC 1 cut(s) 1071
LmnI GCTCC 4 cut(s) 151, 179, 1299, 1544
Lsp1109I GCAGC 6 cut(s) 697, 724, 854, 1069, 1303, 1584
LweI GCATC 2 cut(s) 790, 1051
MaeI CTAG 5 cut(s) 251, 372, 581, 609, 681
MaeII ACGT 2 cut(s) 958, 1023
MaeIII GTNAC 3 cut(s) 58, 916, 1559
MalI GATC 6 cut(s) 106, 190, 1137, 1248, 1389, 1604
MboI GATC 6 cut(s) 104, 188, 1135, 1246, 1387, 1602
MfeI CAATTG 2 cut(s) 657, 951
MflI RGATCY 2 cut(s) 104, 1602
MlyI GAGTC 1 cut(s) 1372
MmeI TCCRAC 3 cut(s) 238, 756, 1444
MroXI GAANNNNTTC 2 cut(s) 636, 792
MseI TTAA 7 cut(s) 11, 36, 318, 345, 525, 603, 879
MslI CAYNNNNRTG 4 cut(s) 54, 461, 1043, 1395
MspA1I CMGCKG 1 cut(s) 1082
MspI CCGG 3 cut(s) 291, 1119, 1384
MspR9I CCNGG 8 cut(s) 389, 755, 1101, 1119, 1120, 1385, 1445, 1502
MunI CAATTG 2 cut(s) 657, 951
MvaI CCWGG 5 cut(s) 389, 755, 1101, 1445, 1502
MvnI CGCG 3 cut(s) 179, 181, 378
MwoI GCNNNNNNNGC 5 cut(s) 143, 180, 1105, 1424, 1454
NciI CCSGG 3 cut(s) 1119, 1120, 1385
NdeII GATC 6 cut(s) 104, 188, 1135, 1246, 1387, 1602
NlaIII CATG 5 cut(s) 238, 511, 670, 1129, 1590
NlaIV GGNNCC 3 cut(s) 175, 324, 556
NmuCI GTSAC 2 cut(s) 58, 916
NsbI TGCGCA 1 cut(s) 870
NspI RCATGY 2 cut(s) 511, 1129
NspV TTCGAA 1 cut(s) 426
OliI CACNNNNGTG 1 cut(s) 461
PagI TCATGA 1 cut(s) 666
PauI GCGCGC 1 cut(s) 179
PciI ACATGT 1 cut(s) 1125
PciSI GCTCTTC 1 cut(s) 1071
PcsI WCGNNNNNNNCGW 1 cut(s) 237
PdmI GAANNNNTTC 2 cut(s) 636, 792
PfeI GAWTC 3 cut(s) 519, 637, 931
PflFI GACNNNGTC 1 cut(s) 378
PfoI TCCNGGA 1 cut(s) 387
PkrI GCNGC 6 cut(s) 712, 739, 844, 1084, 1293, 1599
PleI GAGTC 1 cut(s) 1372
PpsI GAGTC 1 cut(s) 1372
PpuMI RGGWCCY 2 cut(s) 323, 1489
PscI ACATGT 1 cut(s) 1125
PshBI ATTAAT 3 cut(s) 11, 36, 603
Psp5II RGGWCCY 2 cut(s) 323, 1489
Psp6I CCWGG 5 cut(s) 387, 753, 1099, 1443, 1500
PspFI CCCAGC 1 cut(s) 803
PspGI CCWGG 5 cut(s) 387, 753, 1099, 1443, 1500
PspN4I GGNNCC 3 cut(s) 175, 324, 556
PspPI GGNCC 4 cut(s) 293, 323, 554, 1489
PspPPI RGGWCCY 2 cut(s) 323, 1489
PstI CTGCAG 1 cut(s) 994
PsuI RGATCY 2 cut(s) 104, 1602
PsyI GACNNNGTC 1 cut(s) 378
PteI GCGCGC 1 cut(s) 179
RsaI GTAC 3 cut(s) 269, 455, 1124
RsaNI GTAC 3 cut(s) 268, 454, 1123
RseI CAYNNNNRTG 4 cut(s) 54, 461, 1043, 1395
SapI GCTCTTC 1 cut(s) 1071
SaqAI TTAA 7 cut(s) 11, 36, 318, 345, 525, 603, 879
SatI GCNGC 6 cut(s) 711, 738, 843, 1083, 1292, 1598
Sau3AI GATC 6 cut(s) 104, 188, 1135, 1246, 1387, 1602
Sau96I GGNCC 4 cut(s) 293, 323, 554, 1489
SchI GAGTC 1 cut(s) 1372
ScrFI CCNGG 8 cut(s) 389, 755, 1101, 1119, 1120, 1385, 1445, 1502
SfaNI GCATC 2 cut(s) 790, 1051
SfcI CTRYAG 3 cut(s) 184, 990, 1657
SfuI TTCGAA 1 cut(s) 426
SinI GGWCC 3 cut(s) 293, 323, 1489
SmaI CCCGGG 1 cut(s) 1120
SmiMI CAYNNNNRTG 4 cut(s) 54, 461, 1043, 1395
SsiI CCGC 7 cut(s) 167, 177, 378, 772, 1080, 1600, 1671
SspI AATATT 2 cut(s) 349, 998
SspMI CTAG 5 cut(s) 251, 372, 581, 609, 681
StyD4I CCNGG 8 cut(s) 387, 753, 1099, 1117, 1118, 1383, 1443, 1500
StyI CCWWGG 1 cut(s) 1540
TaaI ACNGT 4 cut(s) 277, 463, 1341, 1628
TaiI ACGT 2 cut(s) 961, 1026
TaqI TCGA 2 cut(s) 191, 426
TatI WGTACW 2 cut(s) 267, 453
TfiI GAWTC 3 cut(s) 519, 637, 931
Tru1I TTAA 7 cut(s) 11, 36, 318, 345, 525, 603, 879
Tru9I TTAA 7 cut(s) 11, 36, 318, 345, 525, 603, 879
TscAI CASTG 3 cut(s) 67, 507, 1344
TseFI GTSAC 2 cut(s) 58, 916
TseI GCWGC 6 cut(s) 710, 737, 842, 1082, 1291, 1597
Tsp45I GTSAC 2 cut(s) 58, 916
TspDTI ATGAA 7 cut(s) 17, 32, 683, 744, 1023, 1367, 1466
TspMI CCCGGG 1 cut(s) 1118
TspRI CASTG 3 cut(s) 67, 507, 1344
Tth111I GACNNNGTC 1 cut(s) 378
VpaK11BI GGWCC 3 cut(s) 293, 323, 1489
VspI ATTAAT 3 cut(s) 11, 36, 603
XapI RAATTY 3 cut(s) 648, 1197, 1517
XceI RCATGY 2 cut(s) 511, 1129
XmaI CCCGGG 1 cut(s) 1118
XmiI GTMKAC 2 cut(s) 1130, 1630
XmnI GAANNNNTTC 2 cut(s) 636, 792
XspI CTAG 5 cut(s) 251, 372, 581, 609, 681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.