Rroxscaffold_7G00189620

V-type proton ATPase subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0007224
Physical Location & Seq
Reverse (-)
29391921 .. 29397583
5663 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00189620.1

Sequence Viewer

Length: 1827 bp
ATGGATGTTGGAGCTAATGAAAAACATTCTGAAGCTGCCCCAATCCGTATACTTGTTCCCACGTCCGCCAATCACTCAAACGGAACAAAGCCTCATTACTCTACACCAATCCCTACCGTTCAATCGCTGGAACCCCCAATCATTTGCCTCCACCTTATCTATCGCGGAAGAGCTCGGACAAAAGATCCTGGCTCCATCCAATGGAATATTTACACAGCACAGAGGGTCCCATCTCACACTTCTTTCTTCTTCTTCTTCATCATCCTCTTTGCTCGGTGTTGCTCTCTTCCTCGTCTCTCCGCTCCAGATCGAAACCAAAACAAGCTTGCAAATATGGCTGTTTCACAAAACAATCACGATTTGGAGGAGGGAACGCTAGAGGTCGGCATGGAGTACAGAACTGTCTCTGGTGTGGCTGGACCTCTGGTTATCCTTGAAAAAGTTAAGGGACCCAAGTTTCAGGAGATTGTTAATATTCGGTTAGGAGATGGAACAATTCGACGTGGCCAGGTCCTGGAGGTTGATGGAGAGAAAGCTATTGTTCAGGTTTTCGAAGGAACATCTGGAATTGACAACAAGTATACCACAGTGCAGTTTACAGGAGAGGTGTTGAAAACTCCAGTCTCTCTGGACATGCTTGGGCGGATTTTTAATGGTTCTGGGAAACCCATTGACAATGGCCCCCCAATTTTGCCGGAGGCTTACCTAGACATATCTGGTAGTTCTATCAATCCCAGTGAGAGAACATATCCTGAAGAGATGATACAGACAGGAATTTCTACAATTGATGTTATGAATTCCATTGCCAGAGGACAAAAGATCCCACTTTTCTCTGCTGCTGGTCTACCTCATAATGAGATTGCAGCTCAGATATGTCGCCAGGCTGGTCTGGTCAAGCGGTTGGAGAAATCTGACAATCTTCTTGATGCTGGGGATGTGGAAGACGACAACTTCGCCATTGTGTTTGCTGCTATGGGGGTAAATATGGAGACCGCACAGTTCTTCAAACGTGATTTTGAGGAAAATGGTTCAATGGAGAGGGTCACCCTTTTTCTTAATCTGGCAAATGACCCTACAATTGAACGTATTATTACTCCTCGTATTGCTCTTACTACGGCAGAGTATTTGGCATATGAATGTGGGAAGCATGTCCTTGTCATACTGACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCTCGAGAGGAAGTGCCCGGAAGGCGTGGATATCCGGGGTACATGTATACTGATCTGGCACAAATCTATGAGCGTGCTGGAAGAATTGAAGGGCGAAAAGGCTCCATCACACAAATTCCAATTTTAACTATGCCCAATGATGATATTACACATCCCACCCCAGATCTTACGGGATATATCACTGAGGGACAGGTGTACATTGACAGACAGCTCTACAACAGACAGATCTTGCAATGGTTATATCATGTATACCCACCAATCAATGTCCTTCCATCACTTTCTCGTTTGATGAAGAGTGCTATTGGTGAAGGGATGACTCGCAAGGATCATTCTGATGTATCCAATCAGTTGTATGCAAATTATGCAATTGGGAAGGATGTCCAAGCCATGAAAGCTGTGGTTGGAGAAGAAGCTCTTTCTTCTGAGGACTTGCTATACCTGGAGTTTTTGGACAAGTTTGAGAAGAAATTTGTGAGCCAAGGAGCCTATGATACTCGTAGTATCTTCCAGTCTCTTGATTTGGCATGGACATTGCTACGCATTTTCCCTCGTGAGCTTCTCCACCGTATACCTATAAAGACCCTAGATCTGTTCTACAGCAGAGATGCAACTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001678 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005911 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007165 GO:0008064 GO:0008092 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009743 GO:0009746 GO:0009749 GO:0009756 GO:0009757 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010182 GO:0010255 GO:0010468 GO:0010556 GO:0010639 GO:0012505 GO:0016020 GO:0016043 GO:0019219 GO:0019222 GO:0019725 GO:0022607 GO:0023052 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031090 GO:0031323 GO:0031326 GO:0031333 GO:0032271 GO:0032272 GO:0032535 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0033500 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046686 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051171 GO:0051252 GO:0051493 GO:0051494 GO:0051693 GO:0051716 GO:0055044 GO:0055082 GO:0060255 GO:0061572 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071840 GO:0071944 GO:0080090 GO:0090066 GO:0097435 GO:0098588 GO:0098805 GO:0110053 GO:1901700 GO:1901701 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04145 ko04150 ko04721 ko04966 ko05110 ko05120 ko05323 map00190 map01100 map04145 map04150 map04721 map04966 map05110 map05120 map05323
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N

Protein Analysis

608

Amino Acids

67.89

Weight (kDa)

5.6

Isoelectric Point (pI)

33.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_ab_N PF02874 135 - 201 1.1e-14 ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab PF00006 258 - 497 1.1e-70 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_VA_C PF22919 503 - 601 1.4e-33 C-terminal domain of V and A type ATP synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 201, 514
AccBSI CCGCTC 1 cut(s) 302
AccI GTMKAC 6 cut(s) 49, 581, 844, 1256, 1458, 1777
AccII CGCG 1 cut(s) 165
AciI CCGC 6 cut(s) 66, 165, 300, 643, 898, 993
AclWI GGATC 3 cut(s) 179, 814, 1542
AcoI YGGCCR 1 cut(s) 505
AcsI RAATTY 4 cut(s) 774, 796, 1323, 1676
AcuI CTGAAG 2 cut(s) 51, 774
AfaI GTAC 3 cut(s) 395, 1250, 1406
AfiI CCNNNNNNNGG 2 cut(s) 201, 514
AflIII ACRYGT 1 cut(s) 1251
AgsI TTSAA 7 cut(s) 122, 437, 613, 1006, 1032, 1082, 1298
AjiI CACGTC 2 cut(s) 63, 503
AjnI CCWGG 5 cut(s) 187, 507, 513, 879, 1647
Alw21I GWGCWC 1 cut(s) 175
Alw26I GTCTC 5 cut(s) 299, 409, 628, 983, 1725
AlwI GGATC 3 cut(s) 179, 814, 1542
AlwNI CAGNNNCTG 1 cut(s) 514
Ama87I CYCGRG 1 cut(s) 1212
AoxI GGCC 2 cut(s) 505, 679
ApeKI GCWGC 5 cut(s) 35, 836, 863, 968, 1208
ApoI RAATTY 4 cut(s) 774, 796, 1323, 1676
ArsI GACNNNNNNTTYG 2 cut(s) 935, 967
AspS9I GGNCC 5 cut(s) 226, 419, 449, 511, 680
AsuC2I CCSGG 2 cut(s) 1227, 1245
AsuHPI GGTGA 2 cut(s) 1036, 1526
AsuII TTCGAA 1 cut(s) 552
AvaI CYCGRG 1 cut(s) 1212
AvaII GGWCC 4 cut(s) 226, 419, 449, 511
BaeGI GKGCMC 1 cut(s) 1227
BalI TGGCCA 1 cut(s) 507
BanII GRGCYC 1 cut(s) 175
BarI GAAGNNNNNNTAC 2 cut(s) 747, 779
BauI CACGAG 1 cut(s) 1758
BbsI GAAGAC 1 cut(s) 948
Bbv12I GWGCWC 1 cut(s) 175
BbvI GCAGC 5 cut(s) 22, 823, 875, 955, 1195
BccI CCATC 6 cut(s) 203, 238, 482, 518, 1322, 1489
BceAI ACGGC 1 cut(s) 1131
BciT130I CCWGG 5 cut(s) 189, 509, 515, 881, 1649
BciVI GTATCC 1 cut(s) 1558
BcnI CCSGG 2 cut(s) 1227, 1245
BcoDI GTCTC 5 cut(s) 299, 409, 628, 983, 1725
BfaI CTAG 3 cut(s) 377, 707, 1793
BfmI CTRYAG 1 cut(s) 1804
BfuI GTATCC 1 cut(s) 1558
BglI GCCNNNNNGGC 1 cut(s) 1231
BglII AGATCT 3 cut(s) 1372, 1434, 1795
BisI GCNGC 5 cut(s) 36, 837, 864, 969, 1209
BlsI GCNGC 5 cut(s) 37, 838, 865, 970, 1210
Bme1390I CCNGG 7 cut(s) 189, 509, 515, 881, 1227, 1245, 1649
Bme18I GGWCC 4 cut(s) 226, 419, 449, 511
BmeT110I CYCGRG 1 cut(s) 1212
BmgBI CACGTC 2 cut(s) 63, 503
BmgT120I GGNCC 5 cut(s) 226, 419, 449, 511, 680
BmiI GGNNCC 9 cut(s) 132, 193, 227, 228, 450, 451, 682, 1312, 1693
BmrFI CCNGG 7 cut(s) 189, 509, 515, 881, 1227, 1245, 1649
BmrI ACTGGG 1 cut(s) 729
BmsI GCATC 3 cut(s) 916, 1177, 1804
BmuI ACTGGG 1 cut(s) 729
BpiI GAAGAC 1 cut(s) 948
BpmI CTGGAG 4 cut(s) 288, 536, 603, 1670
Bpu14I TTCGAA 1 cut(s) 552
BpuMI CCSGG 2 cut(s) 1227, 1245
BsaI GGTCTC 1 cut(s) 983
BsaJI CCNNGG 2 cut(s) 1244, 1687
Bsc4I CCNNNNNNNGG 2 cut(s) 201, 514
Bse1I ACTGG 3 cut(s) 620, 735, 1717
Bse3DI GCAATG 3 cut(s) 801, 1448, 1739
BseBI CCWGG 5 cut(s) 189, 509, 515, 881, 1649
BseDI CCNNGG 2 cut(s) 1244, 1687
BseGI GGATG 7 cut(s) 10, 195, 261, 940, 1360, 1527, 1591
BseLI CCNNNNNNNGG 2 cut(s) 201, 514
BseMI GCAATG 3 cut(s) 801, 1448, 1739
BseMII CTCAG 3 cut(s) 881, 1383, 1623
BseNI ACTGG 3 cut(s) 620, 735, 1717
BseRI GAGGAG 2 cut(s) 380, 1086
BseSI GKGCMC 1 cut(s) 1227
BseXI GCAGC 5 cut(s) 22, 823, 875, 955, 1195
BseYI CCCAGC 1 cut(s) 929
BsgI GTGCAG 1 cut(s) 611
Bsh1236I CGCG 1 cut(s) 165
BshFI GGCC 2 cut(s) 507, 681
BsiHKAI GWGCWC 1 cut(s) 175
BsiHKCI CYCGRG 1 cut(s) 1212
BsiSI CCGG 3 cut(s) 695, 1227, 1244
BslFI GGGAC 3 cut(s) 212, 462, 1410
BslI CCNNNNNNNGG 2 cut(s) 201, 514
BsmAI GTCTC 5 cut(s) 299, 409, 628, 983, 1725
BsmBI CGTCTC 1 cut(s) 299
BsmFI GGGAC 3 cut(s) 212, 462, 1410
BsnI GGCC 2 cut(s) 507, 681
Bso31I GGTCTC 1 cut(s) 983
BsoBI CYCGRG 1 cut(s) 1212
Bsp119I TTCGAA 1 cut(s) 552
Bsp1286I GDGCHC 2 cut(s) 175, 1227
Bsp1407I TGTACA 1 cut(s) 1404
Bsp143I GATC 8 cut(s) 184, 307, 819, 1261, 1372, 1434, 1534, 1795
BspACI CCGC 6 cut(s) 66, 165, 300, 643, 898, 993
BspANI GGCC 2 cut(s) 507, 681
BspCNI CTCAG 3 cut(s) 880, 1384, 1624
BspFNI CGCG 1 cut(s) 165
BspLI GGNNCC 9 cut(s) 132, 193, 227, 228, 450, 451, 682, 1312, 1693
BspPI GGATC 3 cut(s) 179, 814, 1542
BspQI GCTCTTC 2 cut(s) 163, 1197
BspT104I TTCGAA 1 cut(s) 552
BspTNI GGTCTC 1 cut(s) 983
BsrBI CCGCTC 1 cut(s) 302
BsrDI GCAATG 3 cut(s) 801, 1448, 1739
BsrGI TGTACA 1 cut(s) 1404
BsrI ACTGG 3 cut(s) 620, 735, 1717
BssECI CCNNGG 2 cut(s) 1244, 1687
BssMI GATC 8 cut(s) 184, 307, 819, 1261, 1372, 1434, 1534, 1795
BssNAI GTATAC 5 cut(s) 50, 582, 1257, 1459, 1778
BssSI CACGAG 1 cut(s) 1758
BssT1I CCWWGG 1 cut(s) 1687
Bst1107I GTATAC 5 cut(s) 50, 582, 1257, 1459, 1778
Bst2BI CACGAG 1 cut(s) 1758
Bst2UI CCWGG 5 cut(s) 189, 509, 515, 881, 1649
Bst4CI ACNGT 5 cut(s) 118, 403, 589, 999, 1775
Bst6I CTCTTC 5 cut(s) 163, 291, 750, 1197, 1496
BstAPI GCANNNNNTGC 1 cut(s) 1571
BstAUI TGTACA 1 cut(s) 1404
BstBI TTCGAA 1 cut(s) 552
BstC8I GCNNGC 2 cut(s) 327, 1284
BstDEI CTNAG 3 cut(s) 867, 1392, 1632
BstEII GGTNACC 1 cut(s) 1042
BstF5I GGATG 7 cut(s) 10, 195, 261, 940, 1360, 1527, 1591
BstFNI CGCG 1 cut(s) 165
BstKTI GATC 8 cut(s) 187, 310, 822, 1264, 1375, 1437, 1537, 1798
BstMAI GTCTC 5 cut(s) 299, 409, 628, 983, 1725
BstMBI GATC 8 cut(s) 184, 307, 819, 1261, 1372, 1434, 1534, 1795
BstMWI GCNNNNNNNGC 4 cut(s) 335, 1231, 1571, 1601
BstNI CCWGG 5 cut(s) 189, 509, 515, 881, 1649
BstNSI RCATGY 3 cut(s) 637, 1151, 1255
BstPI GGTNACC 1 cut(s) 1042
BstSCI CCNGG 7 cut(s) 187, 507, 513, 879, 1225, 1243, 1647
BstSFI CTRYAG 1 cut(s) 1804
BstSLI GKGCMC 1 cut(s) 1227
BstUI CGCG 1 cut(s) 165
BstV1I GCAGC 5 cut(s) 22, 823, 875, 955, 1195
BstV2I GAAGAC 1 cut(s) 948
BstX2I RGATCY 5 cut(s) 184, 819, 1372, 1434, 1795
BstYI RGATCY 5 cut(s) 184, 819, 1372, 1434, 1795
BstZ17I GTATAC 5 cut(s) 50, 582, 1257, 1459, 1778
BsuI GTATCC 1 cut(s) 1558
BsuRI GGCC 2 cut(s) 507, 681
BtrI CACGTC 2 cut(s) 63, 503
BtsCI GGATG 7 cut(s) 10, 195, 261, 940, 1360, 1527, 1591
BtsIMutI CAGTG 3 cut(s) 594, 742, 1389
Cac8I GCNNGC 2 cut(s) 327, 1284
CaiI CAGNNNCTG 1 cut(s) 514
Cfr13I GGNCC 5 cut(s) 226, 419, 449, 511, 680
Csp6I GTAC 3 cut(s) 394, 1249, 1405
CviAII CATG 7 cut(s) 388, 634, 1148, 1252, 1454, 1597, 1734
CviQI GTAC 3 cut(s) 394, 1249, 1405
DdeI CTNAG 3 cut(s) 867, 1392, 1632
DpnI GATC 8 cut(s) 186, 309, 821, 1263, 1374, 1436, 1536, 1797
DpnII GATC 8 cut(s) 184, 307, 819, 1261, 1372, 1434, 1534, 1795
EaeI YGGCCR 1 cut(s) 505
Eam1104I CTCTTC 5 cut(s) 163, 291, 750, 1197, 1496
EarI CTCTTC 5 cut(s) 163, 291, 750, 1197, 1496
EciI GGCGGA 2 cut(s) 55, 658
Ecl136II GAGCTC 1 cut(s) 173
Eco130I CCWWGG 1 cut(s) 1687
Eco24I GRGCYC 1 cut(s) 175
Eco31I GGTCTC 1 cut(s) 983
Eco32I GATATC 1 cut(s) 1241
Eco47I GGWCC 4 cut(s) 226, 419, 449, 511
Eco53kI GAGCTC 1 cut(s) 173
Eco57I CTGAAG 2 cut(s) 51, 774
Eco88I CYCGRG 1 cut(s) 1212
Eco91I GGTNACC 1 cut(s) 1042
EcoICRI GAGCTC 1 cut(s) 173
EcoO109I RGGNCCY 3 cut(s) 226, 449, 511
EcoO65I GGTNACC 1 cut(s) 1042
EcoRI GAATTC 1 cut(s) 796
EcoRII CCWGG 5 cut(s) 187, 507, 513, 879, 1647
EcoRV GATATC 1 cut(s) 1241
EcoT14I CCWWGG 1 cut(s) 1687
EcoT38I GRGCYC 1 cut(s) 175
ErhI CCWWGG 1 cut(s) 1687
Esp3I CGTCTC 1 cut(s) 299
FaeI CATG 7 cut(s) 391, 637, 1151, 1255, 1457, 1600, 1737
FalI AAGNNNNNCTT 2 cut(s) 1608, 1640
FaqI GGGAC 3 cut(s) 212, 462, 1410
FatI CATG 7 cut(s) 387, 633, 1147, 1251, 1453, 1596, 1733
FauNDI CATATG 1 cut(s) 1132
FblI GTMKAC 6 cut(s) 49, 581, 844, 1256, 1458, 1777
Fnu4HI GCNGC 5 cut(s) 36, 837, 864, 969, 1209
FokI GGATG 7 cut(s) 17, 182, 248, 947, 1347, 1534, 1598
FriOI GRGCYC 1 cut(s) 175
Fsp4HI GCNGC 5 cut(s) 36, 837, 864, 969, 1209
FspBI CTAG 3 cut(s) 377, 707, 1793
GluI GCNGC 5 cut(s) 36, 837, 864, 969, 1209
GsaI CCCAGC 1 cut(s) 933
GsuI CTGGAG 4 cut(s) 288, 536, 603, 1670
HaeIII GGCC 2 cut(s) 507, 681
HapII CCGG 3 cut(s) 695, 1227, 1244
Hin1II CATG 7 cut(s) 391, 637, 1151, 1255, 1457, 1600, 1737
HindIII AAGCTT 1 cut(s) 323
HinfI GANTC 1 cut(s) 1525
HpaII CCGG 3 cut(s) 695, 1227, 1244
HphI GGTGA 2 cut(s) 1036, 1526
Hpy166II GTNNAC 8 cut(s) 50, 582, 597, 845, 1257, 1405, 1459, 1778
Hpy188I TCNGA 6 cut(s) 31, 177, 870, 913, 1543, 1633
Hpy8I GTNNAC 8 cut(s) 50, 582, 597, 845, 1257, 1405, 1459, 1778
Hpy99I CGWCG 1 cut(s) 504
HpyAV CCTTC 6 cut(s) 548, 1224, 1292, 1487, 1511, 1576
HpyCH4III ACNGT 5 cut(s) 118, 403, 589, 999, 1775
HpyCH4IV ACGT 4 cut(s) 62, 502, 1009, 1084
HpyCH4V TGCA 7 cut(s) 329, 592, 863, 1441, 1565, 1574, 1817
HpyF10VI GCNNNNNNNGC 4 cut(s) 335, 1231, 1571, 1601
HpyF3I CTNAG 3 cut(s) 867, 1392, 1632
HpySE526I ACGT 4 cut(s) 62, 502, 1009, 1084
Hsp92II CATG 7 cut(s) 391, 637, 1151, 1255, 1457, 1600, 1737
KflI GGGWCCC 2 cut(s) 226, 449
Kzo9I GATC 8 cut(s) 184, 307, 819, 1261, 1372, 1434, 1534, 1795
LguI GCTCTTC 2 cut(s) 163, 1197
LmnI GCTCC 5 cut(s) 11, 197, 307, 1316, 1691
Lsp1109I GCAGC 5 cut(s) 22, 823, 875, 955, 1195
LweI GCATC 3 cut(s) 916, 1177, 1804
MaeI CTAG 3 cut(s) 377, 707, 1793
MaeII ACGT 4 cut(s) 62, 502, 1009, 1084
MaeIII GTNAC 1 cut(s) 1042
MalI GATC 8 cut(s) 186, 309, 821, 1263, 1374, 1436, 1536, 1797
MbiI CCGCTC 1 cut(s) 302
MboI GATC 8 cut(s) 184, 307, 819, 1261, 1372, 1434, 1534, 1795
MfeI CAATTG 3 cut(s) 783, 1077, 1575
MflI RGATCY 5 cut(s) 184, 819, 1372, 1434, 1795
MhlI GDGCHC 2 cut(s) 175, 1227
MlsI TGGCCA 1 cut(s) 507
MluNI TGGCCA 1 cut(s) 507
MlyI GAGTC 1 cut(s) 1519
MmeI TCCRAC 2 cut(s) 882, 1591
Mox20I TGGCCA 1 cut(s) 507
MscI TGGCCA 1 cut(s) 507
MseI TTAA 5 cut(s) 444, 471, 651, 1056, 1334
MslI CAYNNNNRTG 2 cut(s) 1135, 1542
Msp20I TGGCCA 1 cut(s) 507
MspI CCGG 3 cut(s) 695, 1227, 1244
MspR9I CCNGG 7 cut(s) 189, 509, 515, 881, 1227, 1245, 1649
MunI CAATTG 3 cut(s) 783, 1077, 1575
MvaI CCWGG 5 cut(s) 189, 509, 515, 881, 1649
MvnI CGCG 1 cut(s) 165
MwoI GCNNNNNNNGC 4 cut(s) 335, 1231, 1571, 1601
NciI CCSGG 2 cut(s) 1227, 1245
NdeI CATATG 1 cut(s) 1132
NdeII GATC 8 cut(s) 184, 307, 819, 1261, 1372, 1434, 1534, 1795
NlaIII CATG 7 cut(s) 391, 637, 1151, 1255, 1457, 1600, 1737
NlaIV GGNNCC 9 cut(s) 132, 193, 227, 228, 450, 451, 682, 1312, 1693
NmuCI GTSAC 1 cut(s) 1042
NspI RCATGY 3 cut(s) 637, 1151, 1255
NspV TTCGAA 1 cut(s) 552
PaeR7I CTCGAG 1 cut(s) 1212
PciI ACATGT 1 cut(s) 1251
PciSI GCTCTTC 2 cut(s) 163, 1197
PflMI CCANNNNNTGG 2 cut(s) 201, 514
PfoI TCCNGGA 1 cut(s) 513
PkrI GCNGC 5 cut(s) 37, 838, 865, 970, 1210
PleI GAGTC 1 cut(s) 1519
PpsI GAGTC 1 cut(s) 1519
PpuMI RGGWCCY 3 cut(s) 226, 449, 511
PscI ACATGT 1 cut(s) 1251
Psp124BI GAGCTC 1 cut(s) 175
Psp5II RGGWCCY 3 cut(s) 226, 449, 511
Psp6I CCWGG 5 cut(s) 187, 507, 513, 879, 1647
PspEI GGTNACC 1 cut(s) 1042
PspFI CCCAGC 1 cut(s) 929
PspGI CCWGG 5 cut(s) 187, 507, 513, 879, 1647
PspN4I GGNNCC 9 cut(s) 132, 193, 227, 228, 450, 451, 682, 1312, 1693
PspPI GGNCC 5 cut(s) 226, 419, 449, 511, 680
PspPPI RGGWCCY 3 cut(s) 226, 449, 511
PstNI CAGNNNCTG 1 cut(s) 514
PsuI RGATCY 5 cut(s) 184, 819, 1372, 1434, 1795
RsaI GTAC 3 cut(s) 395, 1250, 1406
RsaNI GTAC 3 cut(s) 394, 1249, 1405
RseI CAYNNNNRTG 2 cut(s) 1135, 1542
SacI GAGCTC 1 cut(s) 175
SapI GCTCTTC 2 cut(s) 163, 1197
SaqAI TTAA 5 cut(s) 444, 471, 651, 1056, 1334
SatI GCNGC 5 cut(s) 36, 837, 864, 969, 1209
Sau3AI GATC 8 cut(s) 184, 307, 819, 1261, 1372, 1434, 1534, 1795
Sau96I GGNCC 5 cut(s) 226, 419, 449, 511, 680
SchI GAGTC 1 cut(s) 1519
ScrFI CCNGG 7 cut(s) 189, 509, 515, 881, 1227, 1245, 1649
SduI GDGCHC 2 cut(s) 175, 1227
SfaNI GCATC 3 cut(s) 916, 1177, 1804
SfcI CTRYAG 1 cut(s) 1804
Sfr274I CTCGAG 1 cut(s) 1212
SfuI TTCGAA 1 cut(s) 552
SinI GGWCC 4 cut(s) 226, 419, 449, 511
SlaI CTCGAG 1 cut(s) 1212
SmiMI CAYNNNNRTG 2 cut(s) 1135, 1542
SmlI CTYRAG 1 cut(s) 1212
SmoI CTYRAG 1 cut(s) 1212
SsiI CCGC 6 cut(s) 66, 165, 300, 643, 898, 993
SspI AATATT 2 cut(s) 208, 475
SspMI CTAG 3 cut(s) 377, 707, 1793
SstI GAGCTC 1 cut(s) 175
StyD4I CCNGG 7 cut(s) 187, 507, 513, 879, 1225, 1243, 1647
StyI CCWWGG 1 cut(s) 1687
TaaI ACNGT 5 cut(s) 118, 403, 589, 999, 1775
TaiI ACGT 4 cut(s) 65, 505, 1012, 1087
TaqI TCGA 4 cut(s) 310, 499, 552, 1213
TatI WGTACW 2 cut(s) 393, 1404
Tru1I TTAA 5 cut(s) 444, 471, 651, 1056, 1334
Tru9I TTAA 5 cut(s) 444, 471, 651, 1056, 1334
TscAI CASTG 3 cut(s) 594, 742, 1396
TseFI GTSAC 1 cut(s) 1042
TseI GCWGC 5 cut(s) 35, 836, 863, 968, 1208
Tsp45I GTSAC 1 cut(s) 1042
TspDTI ATGAA 6 cut(s) 33, 247, 809, 1149, 1514, 1613
TspGWI ACGGA 2 cut(s) 35, 96
TspRI CASTG 3 cut(s) 594, 742, 1396
Van91I CCANNNNNTGG 2 cut(s) 201, 514
VpaK11BI GGWCC 4 cut(s) 226, 419, 449, 511
XapI RAATTY 4 cut(s) 774, 796, 1323, 1676
XceI RCATGY 3 cut(s) 637, 1151, 1255
XcmI CCANNNNNNNNNTGG 1 cut(s) 1603
XhoI CTCGAG 1 cut(s) 1212
XmiI GTMKAC 6 cut(s) 49, 581, 844, 1256, 1458, 1777
XspI CTAG 3 cut(s) 377, 707, 1793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.